Predicted myristoylation in ./152015VIgenpeptNR100.fa

	MYRbase Genbank - Viruses

	EvOluation of proteome-wide predictions of glycine myristoylation

Clusters 1-20 >> next

Evaluated database entries: 152015
Predicted entries: 5681 (5157 RELIABLE and 524 TWILIGHT ZONE)
Clusters of predicted entries (with >40% identity): 188

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Homologous
Cluster Size

Protein Information

Pos.

Myristoylation Motif

Score

Prob.FPP

Prediction

^{~4 org.} 1801
_{+SW MYR-Ann._{_{nef immunodeficiency virus negative}}}

21425711 nef protein [Human immunodeficiency virus 1] CD BLAST

GGKWSKSSLVGWPAVRE

Score		Profile
5.004	= &#931 of	5.358
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.238
V 7&9	H 8-10	F 3-5
-0.008	-0.108	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~7 org.} 950
_{+SW MYR-Ann._{_{gag polyprotein p17 pol}}}

2570314 gag-Pol fusion [Human immunodeficiency virus type 1] CD BLAST

GARASVLSGGKLDEWEK

Score		Profile
4.594	= &#931 of	4.734
V 2&3	H 2&3	H 6-17
-0.017	0.000	-0.023
V 7&9	H 8-10	F 3-5
0.000	0.000	0.000
P 5&6	H2&5	V 2-11
-0.100	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~5 org.} 344
_{surface envelope antigen pres1}

27466420 preS1 [Hepatitis B virus] CD BLAST

GGWTSKPRKGMGTNLSV

Score		Profile
0.923	= &#931 of	1.212
V 2&3	H 2&3	H 6-17
-0.102	-0.074	-0.001
V 7&9	H 8-10	F 3-5
-0.028	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	-0.085

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.002

RELIABLE

^{~80 org.} 334
_{polyprotein vp4 capsid vp2}

PIR - 2120041 genome polyprotein - bovine enterovirus (strain RM-2) (fragment) CD BLAST

GAQMSRNTAGSHTTGTY

Score		Profile
3.135	= &#931 of	3.135
V 2&3	H 2&3	H 6-17
0.000	0.000	0.000
V 7&9	H 8-10	F 3-5
0.000	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~6 org.} 307
_{gag p17 matrix polyprotein}

294961 gag protein [Simian immunodeficiency virus] CD BLAST

GAAGSAILTGRELDRYE

Score		Profile
1.959	= &#931 of	2.411
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.356
V 7&9	H 8-10	F 3-5
-0.094	-0.000	0.000
P 5&6	H2&5	V 2-11
-0.002	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~4 org.} 189
_{nef truncated 8886639 862819}

5106570 Nef protein [Simian immunodeficiency virus] CD BLAST

GNAFGRPSEVGWVRTLF

Score		Profile
1.001	= &#931 of	1.180
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.170
V 7&9	H 8-10	F 3-5
-0.009	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.002

RELIABLE

^{~3 org.} 174
_{+SW MYR-Ann._{_{gag polyprotein truncated p55}}}

12657809 gag protein [Simian immunodeficiency virus] CD BLAST

GNEQGLLGKKTLEDLQK

Score		Profile
-1.614	= &#931 of	-1.216
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.170
V 7&9	H 8-10	F 3-5
-0.092	-0.001	0.000
P 5&6	H2&5	V 2-11
-0.134	0.000	-0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.021

TWILIGHT ZONE

^{~4 org.} 162
_{nef truncated glycoprotein envelope}

20126970 nef protein [Human immunodeficiency virus 1] CD BLAST

GGKCSKRSFPGWDTIRE

Score		Profile
2.609	= &#931 of	4.643
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.097
V 7&9	H 8-10	F 3-5
-0.040	-0.382	-1.516
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~6 org.} 126
_{+SW MYR-Ann._{_{nef virus immunodeficiency isolate}}}

PIR - 77283 nef protein - simian immunodeficiency virus SIVsm (isolate F236) CD BLAST

GGAISKKQYKRGGNLRE

Score		Profile
3.425	= &#931 of	3.936
V 2&3	H 2&3	H 6-17
0.000	0.000	0.000
V 7&9	H 8-10	F 3-5
-0.036	-0.129	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	-0.346

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~5 org.} 123
_{nef virus regulatory np_054373}

3513413 nef protein [Simian immunodeficiency virus] CD BLAST

GGKSSKQQQERSLWLWS

Score		Profile
1.317	= &#931 of	2.842
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.031
V 7&9	H 8-10	F 3-5
-0.001	0.000	-1.459
P 5&6	H2&5	V 2-11
0.000	0.000	-0.035

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.001

RELIABLE

^{~46 org.} 107
_{+SW MYR-Ann._{_{polyprotein genome coxsackievirus precursor}}}

PIR - 476367 genome polyprotein - coxsackievirus A24 (strain EH24/70) CD BLAST

GAQVSSQKVGAHENTNV

Score		Profile
4.133	= &#931 of	4.212
V 2&3	H 2&3	H 6-17
0.000	0.000	0.000
V 7&9	H 8-10	F 3-5
-0.071	-0.007	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~43 org.} 75
_{c4 ac4 regulator transcriptional}

28380577 C4 protein [Tomato yellow leaf curl Malaga virus] CD BLAST

GNHISMCLSNLKGNSSA

Score		Profile
1.950	= &#931 of	2.282
V 2&3	H 2&3	H 6-17
-0.035	0.000	-0.127
V 7&9	H 8-10	F 3-5
0.000	0.000	0.000
P 5&6	H2&5	V 2-11
-0.129	0.000	-0.041

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~3 org.} 73
_{envelope glycoprotein c4 c2}

14335953 envelope glycoprotein [Human immunodeficiency virus 1] CD BLAST

GLNGSLAEEEIVIRSEN

Score		Profile
-1.987	= &#931 of	-0.828
V 2&3	H 2&3	H 6-17
-0.072	0.000	-0.068
V 7&9	H 8-10	F 3-5
0.000	0.000	0.000
P 5&6	H2&5	V 2-11
-0.119	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	-0.900

0.027

TWILIGHT ZONE

^{~20 org.} 56
_{polyprotein precursor viral pol}

22293501 polyprotein [Turnip mosaic virus] CD BLAST

GNNSGQPSTVVDNTLMV

Score		Profile
-1.529	= &#931 of	-1.307
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.193
V 7&9	H 8-10	F 3-5
-0.029	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.020

TWILIGHT ZONE

^{~2 org.} 56
_{pre mutant surface middle}

21218028 large S protein [Hepatitis B virus] CD BLAST

GGWSSKPRQGMGTNLSV

Score		Profile
1.157	= &#931 of	1.355
V 2&3	H 2&3	H 6-17
-0.102	-0.074	0.000
V 7&9	H 8-10	F 3-5
-0.016	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	-0.006

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.001

RELIABLE

^{~23 org.} 46
_{+SW MYR-Ann._{_{polyprotein capsid genome proteins}}}

330040 HRV89 polyprotein precursor [Human rhinovirus 89] CD BLAST

GAQVSRQNVGTHSTQNS

Score		Profile
4.020	= &#931 of	4.091
V 2&3	H 2&3	H 6-17
0.000	0.000	0.000
V 7&9	H 8-10	F 3-5
-0.071	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~9 org.} 44
_{+SW MYR-Ann._{_{polyprotein p1 capsid genome}}}

SWISSPROT - 1346741 Genome polyprotein [Contains: Nonstructural protein P20A; Coat proteins VP1 TO VP4; Core proteins X, P14, P41, P19; Genome-linked proteins VPG1 TO VPG3; Picornain 3C (Protease 3C) (P3C); RNA-directed RNA polymerase ] [Foot-and-mouth disease virus] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

202

GAGQSSPATGSQNQSGN

Score		Profile
1.405	= &#931 of	3.434
V 2&3	H 2&3	H 6-17
0.000	0.000	0.000
V 7&9	H 8-10	F 3-5
-0.029	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.001

RELIABLE

^{~3 org.} 35
_{nef truncated an rh}

1177213 nef CD BLAST

GGKWSKSSVIGWPTVRE

Score		Profile
4.514	= &#931 of	5.005
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.262
V 7&9	H 8-10	F 3-5
-0.009	-0.220	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~3 org.} 31
_{nef truncated 6694566 6651491}

1680271 nef product [Human immunodeficiency virus type 1] CD BLAST

GGKWSKSSIVGWPAIRE

Score		Profile
5.301	= &#931 of	5.828
V 2&3	H 2&3	H 6-17
0.000	0.000	-0.299
V 7&9	H 8-10	F 3-5
-0.008	-0.220	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	0.000

0.000

RELIABLE

^{~4 org.} 24
_{+SW MYR-Ann._{_{polyprotein genome virus encephalomyocarditis}}}

9626124 viral polyprotein [Theilovirus] CD BLAST

GNASSSDKSNSQSSGNE

Score		Profile
1.181	= &#931 of	4.081
V 2&3	H 2&3	H 6-17
0.000	0.000	0.000
V 7&9	H 8-10	F 3-5
0.000	0.000	0.000
P 5&6	H2&5	V 2-11
0.000	0.000	0.000

SigEx I	SigEx II	SPP
0.000	0.000	-0.900

0.001

RELIABLE

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