Protein Information Pos. Myristoylation Motif Score Prob.FPP Prediction
20126973 nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKCSKHSFPGWDTIRE
2.645
Score Profile
2.645 = &#931 of 4.667
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.092
V 7&9 H 8-10 F 3-5
-0.032 -0.382 -1.516
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
20126970 nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKCSKRSFPGWDTIRE
2.609
Score Profile
2.609 = &#931 of 4.643
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.097
V 7&9 H 8-10 F 3-5
-0.040 -0.382 -1.516
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
9664246 mutant nef protein [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKLGGWPNVRERM
4.501
Score Profile
4.501 = &#931 of 4.616
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.001
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.113
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
27447617 nef protein [Simian immunodeficiency virus] CD BLAST 2 GAQWSKSSLVGWPEIRK
5.525
Score Profile
5.525 = &#931 of 5.810
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
25807938 nef protein [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSIVGWPEVRE
5.778
Score Profile
5.778 = &#931 of 6.136
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
25807928 nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIVGWPEVRE
5.496
Score Profile
5.496 = &#931 of 5.854
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
25167068 nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIVGWPAIRD
5.301
Score Profile
5.301 = &#931 of 5.828
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
25166878 truncated nef protein [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSIVGWPAIRE
5.583
Score Profile
5.583 = &#931 of 6.110
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
PIR - 7462010 nef protein - human immunodeficiency virus type 1 (strain sc14.3) (fragment) CD BLAST 2 GGKWSKSKVGGWPVVRE
5.941
Score Profile
5.941 = &#931 of 6.098
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.141
V 7&9 H 8-10 F 3-5
-0.009 -0.007 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
PIR - 2120099 Nef protein - human immunodeficiency virus type 1 (fragments) CD BLAST 2 GGKSSSSSVVGPLEAQE
0.766
Score Profile
0.766 = &#931 of 2.286
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.032
V 7&9 H 8-10 F 3-5
-0.009 -0.021 -1.459
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.002 RELIABLE
PIR - 1072776 nef protein - human immunodeficiency virus type 1 (fragment) CD BLAST 2 GGRWSKSSIVGWPAIRE
5.226
Score Profile
5.226 = &#931 of 5.753
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
9629364 Nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSVIGWPTVRE
4.514
Score Profile
4.514 = &#931 of 5.005
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.262
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
23954624 truncated nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKRSIVGWPEIKE
5.332
Score Profile
5.332 = &#931 of 5.828
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.157
V 7&9 H 8-10 F 3-5
-0.065 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.055
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
23394686 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSIVGWPAVRE
5.262
Score Profile
5.262 = &#931 of 5.838
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.236
V 7&9 H 8-10 F 3-5
-0.065 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.055
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
23394682 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPAIRE
5.301
Score Profile
5.301 = &#931 of 5.828
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
23394652 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPAIRE
5.301
Score Profile
5.301 = &#931 of 5.828
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
23394650 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVVGWPKIRE
5.604
Score Profile
5.604 = &#931 of 5.836
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.202
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475669 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475666 nef [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSIVGWPQVRE
5.680
Score Profile
5.680 = &#931 of 6.076
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475663 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475660 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIIGWPDVRE
4.330
Score Profile
4.330 = &#931 of 5.128
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.161
V 7&9 H 8-10 F 3-5
-0.008 -0.630 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475657 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIVGWPAVRE
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475654 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIVGWPAVRE
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475651 nef [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSLGGWPAVRE
6.023
Score Profile
6.023 = &#931 of 6.086
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.055
V 7&9 H 8-10 F 3-5
-0.008 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475648 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKLRGWATVRERM
3.951
Score Profile
3.951 = &#931 of 4.382
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.028
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.404
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475645 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSMIGWPAVRE
4.664
Score Profile
4.664 = &#931 of 5.061
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.260
V 7&9 H 8-10 F 3-5
0.000 -0.137 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475643 nef [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSLVGWPTIRE
5.237
Score Profile
5.237 = &#931 of 5.669
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.315
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475640 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSIIGWPAVRE
4.165
Score Profile
4.165 = &#931 of 5.102
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.630 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475638 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSSVIGWPAIRE
4.405
Score Profile
4.405 = &#931 of 4.933
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475635 nef [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSVVGWPAVRE
5.762
Score Profile
5.762 = &#931 of 5.984
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.192
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475632 nef [Human immunodeficiency virus 1] CD BLAST 2 GSKWSKSSVVGWPPVRE
5.536
Score Profile
5.536 = &#931 of 5.746
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.179
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475629 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKRKEGGWPAVRE
6.540
Score Profile
6.540 = &#931 of 6.556
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.016
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475626 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKRKEGGWTAIRE
6.346
Score Profile
6.346 = &#931 of 6.362
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.016
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
475620 nef [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKSKVGGWPAVRE
6.260
Score Profile
6.260 = &#931 of 6.304
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.027
V 7&9 H 8-10 F 3-5
-0.009 -0.007 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
22759338 truncated nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKHSRVEWSKVRE
5.996
Score Profile
5.996 = &#931 of 6.310
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.002
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.312
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
21671323 envelope glycoprotein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVIGWPAVRE
4.483
Score Profile
4.483 = &#931 of 4.955
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
21671319 envelope glycoprotein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVIGWPAVKE
4.503
Score Profile
4.503 = &#931 of 4.962
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.230
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
21671317 envelope glycoprotein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVIGWPAVRE
4.483
Score Profile
4.483 = &#931 of 4.955
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
21671315 envelope glycoprotein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRRGVEWPAVRE
5.515
Score Profile
5.515 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.007
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.328
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
21671311 envelope glycoprotein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRRGVEWPAVRE
5.515
Score Profile
5.515 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.007
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.328
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
17046906 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPTVRE
5.410
Score Profile
5.410 = &#931 of 5.900
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.262
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
17046836 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKCSIIGWPAVRE
3.737
Score Profile
3.737 = &#931 of 4.874
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.440
V 7&9 H 8-10 F 3-5
-0.052 -0.630 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.016
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
17046730 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSSIVGWPKVRE
5.857
Score Profile
5.857 = &#931 of 6.287
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.202
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
17046650 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GNKWSKSWPAVRERIRR
4.805
Score Profile
4.805 = &#931 of 5.380
V 2&3 H 2&3 H 6-17
-0.122 0.000 -0.024
V 7&9 H 8-10 F 3-5
0.000 -0.030 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.397
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
17046620 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPAVRE
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1469864 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGRWSKRSIIGWPAIRE
3.737
Score Profile
3.737 = &#931 of 4.994
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.355
V 7&9 H 8-10 F 3-5
-0.065 -0.630 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.207
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1469862 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSSIVGWPEVRE
5.778
Score Profile
5.778 = &#931 of 6.136
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1469282 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCSMVGWPSVRE
5.023
Score Profile
5.023 = &#931 of 5.327
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.003 -0.002 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1469280 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKMSKLRSGWSNVRER
5.134
Score Profile
5.134 = &#931 of 5.275
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.002
V 7&9 H 8-10 F 3-5
-0.008 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.131
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1439544 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVEWPQVRE
5.499
Score Profile
5.499 = &#931 of 5.849
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.104
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.018
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
18699176 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
18699164 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694568 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSMGGWPTVRE
6.240
Score Profile
6.240 = &#931 of 6.292
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.046
V 7&9 H 8-10 F 3-5
-0.006 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694524 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVVGWPAVRE
5.480
Score Profile
5.480 = &#931 of 5.702
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.192
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694482 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSVLKWPAVRE
5.224
Score Profile
5.224 = &#931 of 5.736
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.183
V 7&9 H 8-10 F 3-5
-0.044 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.175
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694480 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSVLKWPAVRE
5.224
Score Profile
5.224 = &#931 of 5.736
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.183
V 7&9 H 8-10 F 3-5
-0.044 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.175
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694478 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSVLKWPAVRE
5.224
Score Profile
5.224 = &#931 of 5.736
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.183
V 7&9 H 8-10 F 3-5
-0.044 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.175
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694474 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSALKWPAVRE
5.744
Score Profile
5.744 = &#931 of 5.837
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.047
V 7&9 H 8-10 F 3-5
0.000 -0.007 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.038
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694470 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSVLKWPAVRE
5.224
Score Profile
5.224 = &#931 of 5.736
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.183
V 7&9 H 8-10 F 3-5
-0.044 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.175
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694468 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSVLKWPAVRE
5.224
Score Profile
5.224 = &#931 of 5.736
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.183
V 7&9 H 8-10 F 3-5
-0.044 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.175
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694440 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSAGGWSTIRE
6.366
Score Profile
6.366 = &#931 of 6.367
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.001
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6694438 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSAGGWATIRE
6.047
Score Profile
6.047 = &#931 of 6.050
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.003
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
3462802 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
18201571 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSMVGWPTVRE
5.558
Score Profile
5.558 = &#931 of 5.846
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.219
V 7&9 H 8-10 F 3-5
-0.006 -0.002 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.061
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039116 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCSIVGWPAVRE
4.698
Score Profile
4.698 = &#931 of 5.339
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.370
V 7&9 H 8-10 F 3-5
-0.052 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039112 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039105 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSLSGWSTIRER
5.623
Score Profile
5.623 = &#931 of 5.709
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.044
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.042
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039101 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPAVRE
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039097 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPAVRD
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039094 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039090 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQVRE
5.399
Score Profile
5.399 = &#931 of 5.795
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.168
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039078 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSWSTVRERIRK
4.649
Score Profile
4.649 = &#931 of 4.910
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.028
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.234
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039074 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCSGWPAVRERM
4.789
Score Profile
4.789 = &#931 of 4.800
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.011
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039070 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCSPVGWPAVRE
5.178
Score Profile
5.178 = &#931 of 5.435
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.108
V 7&9 H 8-10 F 3-5
-0.008 -0.140 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
14039066 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPEVRE
5.496
Score Profile
5.496 = &#931 of 5.854
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
5805267 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNSIVGWPAIRE
5.155
Score Profile
5.155 = &#931 of 5.654
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.238
V 7&9 H 8-10 F 3-5
-0.042 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
15407118 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSGWSTVRERM
4.846
Score Profile
4.846 = &#931 of 4.957
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.111
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
15407116 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSGWSTVRERM
4.846
Score Profile
4.846 = &#931 of 4.957
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.111
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12407071 regulatory protein [Human immunodeficiency virus 1] CD BLAST 2 GNKWSKSWPAVRERIRR
4.805
Score Profile
4.805 = &#931 of 5.380
V 2&3 H 2&3 H 6-17
-0.122 0.000 -0.024
V 7&9 H 8-10 F 3-5
0.000 -0.030 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.397
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1688178 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSGAGWSTVRE
6.220
Score Profile
6.220 = &#931 of 6.220
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1688176 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKLSKRSGGGWATVRE
3.895
Score Profile
3.895 = &#931 of 5.298
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 -1.403
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
13569266 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GNKWSKSSLVGWPAIRE
5.401
Score Profile
5.401 = &#931 of 5.939
V 2&3 H 2&3 H 6-17
-0.122 0.000 -0.294
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.005
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004891 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSNRSEYVWSTIRE
2.645
Score Profile
2.645 = &#931 of 3.197
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.239
V 7&9 H 8-10 F 3-5
0.000 -0.024 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.289
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004851 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNRVIGWPAVRE
3.870
Score Profile
3.870 = &#931 of 4.660
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.182
V 7&9 H 8-10 F 3-5
-0.044 -0.414 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.148
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004849 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNRVIGWPAVRE
3.870
Score Profile
3.870 = &#931 of 4.660
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.182
V 7&9 H 8-10 F 3-5
-0.044 -0.414 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.148
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004847 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNRVIGWPAVRE
3.870
Score Profile
3.870 = &#931 of 4.660
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.182
V 7&9 H 8-10 F 3-5
-0.044 -0.414 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.148
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004841 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNRVIGWPAVRE
3.870
Score Profile
3.870 = &#931 of 4.660
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.182
V 7&9 H 8-10 F 3-5
-0.044 -0.414 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.148
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004835 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSGWSTVRERM
4.846
Score Profile
4.846 = &#931 of 4.957
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.111
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004815 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVIGWPAVRE
4.483
Score Profile
4.483 = &#931 of 4.955
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
12004811 truncated nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVIGWPAVRE
4.483
Score Profile
4.483 = &#931 of 4.955
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
10436148 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSITGWPAVRE
5.326
Score Profile
5.326 = &#931 of 5.448
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.091
V 7&9 H 8-10 F 3-5
-0.008 -0.023 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6090973 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPAIRE
5.301
Score Profile
5.301 = &#931 of 5.828
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6382036 nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCSGWPAVRERM
4.789
Score Profile
4.789 = &#931 of 4.800
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.011
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
6362214 nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCSGWPAVRDRM
4.587
Score Profile
4.587 = &#931 of 4.597
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.011
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
5730861 Nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSLWVYHTQGYF
1.284
Score Profile
1.284 = &#931 of 3.295
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.829
V 7&9 H 8-10 F 3-5
-0.010 -0.139 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -1.034
SigEx I SigEx II SPP
0.000 0.000 0.000
0.001 RELIABLE
5730859 Nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSLWVYHTQGYF
1.284
Score Profile
1.284 = &#931 of 3.295
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.829
V 7&9 H 8-10 F 3-5
-0.010 -0.139 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -1.034
SigEx I SigEx II SPP
0.000 0.000 0.000
0.001 RELIABLE
5730858 Nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSLWVYHTQGYF
1.284
Score Profile
1.284 = &#931 of 3.295
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.829
V 7&9 H 8-10 F 3-5
-0.010 -0.139 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -1.034
SigEx I SigEx II SPP
0.000 0.000 0.000
0.001 RELIABLE
5730857 Nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSLWVYHTQGYF
1.284
Score Profile
1.284 = &#931 of 3.295
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.829
V 7&9 H 8-10 F 3-5
-0.010 -0.139 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -1.034
SigEx I SigEx II SPP
0.000 0.000 0.000
0.001 RELIABLE
606591 Nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSRIGWPRVRE
5.429
Score Profile
5.429 = &#931 of 5.529
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.049
V 7&9 H 8-10 F 3-5
0.000 -0.051 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.001
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
606587 Nef [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSRIGWPRVRE
5.429
Score Profile
5.429 = &#931 of 5.529
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.049
V 7&9 H 8-10 F 3-5
0.000 -0.051 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.001
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290188 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPKIRK
5.502
Score Profile
5.502 = &#931 of 5.983
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.254
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290183 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSVIGWPTVRE
4.514
Score Profile
4.514 = &#931 of 5.005
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.262
V 7&9 H 8-10 F 3-5
-0.009 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290113 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRKGDGWPTVRE
6.086
Score Profile
6.086 = &#931 of 6.087
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290108 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRKGDEWATVQK
5.655
Score Profile
5.655 = &#931 of 5.791
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.136
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290101 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGIWSRRMGNGWSIVRE
2.911
Score Profile
2.911 = &#931 of 3.226
V 2&3 H 2&3 H 6-17
0.000 -0.133 -0.163
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.018
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290092 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKCGWPAVRERMR
2.282
Score Profile
2.282 = &#931 of 2.394
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.049
V 7&9 H 8-10 F 3-5
-0.056 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.007
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290089 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSSVVGWPAIRE
5.690
Score Profile
5.690 = &#931 of 5.962
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290074 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSVVGWSTIRE
5.472
Score Profile
5.472 = &#931 of 5.820
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.246
V 7&9 H 8-10 F 3-5
-0.068 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.013
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290060 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSTEWTQIRER
4.204
Score Profile
4.204 = &#931 of 4.851
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
-0.004 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.643
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290046 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSSVVGWPAVRE
5.762
Score Profile
5.762 = &#931 of 5.984
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.192
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290040 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRKMDWPTIRDR
2.935
Score Profile
2.935 = &#931 of 4.536
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.002
V 7&9 H 8-10 F 3-5
-0.006 -0.015 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -1.578
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290035 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSLVGWPAIRE
4.926
Score Profile
4.926 = &#931 of 5.337
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.294
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290028 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSLVGWTTVRE
4.827
Score Profile
4.827 = &#931 of 5.236
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.292
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290021 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKNKIEWPAIRER
3.579
Score Profile
3.579 = &#931 of 5.035
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.001
V 7&9 H 8-10 F 3-5
-0.042 -0.302 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -1.111
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2290010 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSLVGWPTVRD
5.035
Score Profile
5.035 = &#931 of 5.408
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.257
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2289997 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSVPGWSVIRE
5.436
Score Profile
5.436 = &#931 of 5.860
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.213
V 7&9 H 8-10 F 3-5
-0.068 -0.140 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.002
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2289994 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKHSVGGWPKVRE
6.241
Score Profile
6.241 = &#931 of 6.315
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.016
V 7&9 H 8-10 F 3-5
-0.058 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2289985 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSLVGWPAVRE
5.004
Score Profile
5.004 = &#931 of 5.358
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.238
V 7&9 H 8-10 F 3-5
-0.008 -0.108 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2289982 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRRAESEWPAIR
3.406
Score Profile
3.406 = &#931 of 3.644
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.238
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231611 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRSIVGWPRVRE
5.580
Score Profile
5.580 = &#931 of 6.127
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.207
V 7&9 H 8-10 F 3-5
-0.065 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.055
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231607 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231604 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231602 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231600 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231597 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2231595 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPQIRE
5.329
Score Profile
5.329 = &#931 of 5.773
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.216
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2108033 premature stop codon [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRNMGGWSTIRE
5.899
Score Profile
5.899 = &#931 of 5.948
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.040
V 7&9 H 8-10 F 3-5
-0.006 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.003
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1905983 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSSIVGWPKVGE
5.496
Score Profile
5.496 = &#931 of 5.914
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.190
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1899110 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPEVRE
5.496
Score Profile
5.496 = &#931 of 5.854
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1899104 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSSIVGWPKVRE
5.576
Score Profile
5.576 = &#931 of 6.005
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.202
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1794234 nef protein CD BLAST 2 GGKWSKSSVVGWPAVRE
5.480
Score Profile
5.480 = &#931 of 5.702
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.192
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1469161 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GSKWSKSSIVGWPEVRE
5.778
Score Profile
5.778 = &#931 of 6.136
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1772633 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGIWSKRSGSGWPAIRE
5.644
Score Profile
5.644 = &#931 of 5.777
V 2&3 H 2&3 H 6-17
0.000 -0.133 0.000
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2569999 nef protein [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKCSIGGWPQIRE
5.549
Score Profile
5.549 = &#931 of 5.709
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.107
V 7&9 H 8-10 F 3-5
-0.052 -0.002 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2351790 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKSKVGGWPVVRE
5.941
Score Profile
5.941 = &#931 of 6.098
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.141
V 7&9 H 8-10 F 3-5
-0.009 -0.007 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
2351236 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKGSIVGWPKVRE
5.313
Score Profile
5.313 = &#931 of 5.717
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.185
V 7&9 H 8-10 F 3-5
0.000 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1899080 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKGSIVGWPKVRE
5.313
Score Profile
5.313 = &#931 of 5.717
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.185
V 7&9 H 8-10 F 3-5
0.000 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1184092 Nef CD BLAST 2 GGKWSKHSVPGWSTVRE
5.919
Score Profile
5.919 = &#931 of 6.161
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.043
V 7&9 H 8-10 F 3-5
-0.058 -0.140 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1710454 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKRIGDGWDAVRE
4.992
Score Profile
4.992 = &#931 of 5.020
V 2&3 H 2&3 H 6-17
0.000 0.000 0.000
V 7&9 H 8-10 F 3-5
0.000 -0.028 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1710451 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKPSVPGWNTIRE
5.822
Score Profile
5.822 = &#931 of 6.150
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.052
V 7&9 H 8-10 F 3-5
-0.136 -0.140 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1710448 nef protein [Human immunodeficiency virus type 1] CD BLAST 2 GGKWSKHSLPGWPAIRE
5.183
Score Profile
5.183 = &#931 of 5.644
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.092
V 7&9 H 8-10 F 3-5
-0.055 -0.314 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495983 nef protein CD BLAST 2 GGKWSKSSIVGWPAVRE
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495978 nef protein CD BLAST 2 GGKWSKRREVGWSTIRE
5.613
Score Profile
5.613 = &#931 of 5.964
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.021
V 7&9 H 8-10 F 3-5
0.000 -0.001 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.328
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495975 nef protein CD BLAST 2 GGKWSKRSMVGWPAIRE
5.452
Score Profile
5.452 = &#931 of 5.775
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.254
V 7&9 H 8-10 F 3-5
-0.006 -0.002 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.061
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495969 nef protein CD BLAST 2 GGKWSKSSIFGWPAIRD
4.182
Score Profile
4.182 = &#931 of 5.202
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.504
V 7&9 H 8-10 F 3-5
-0.008 -0.507 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.001
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495966 nef protein CD BLAST 2 GSKWSKSSIVGWPAIRE
5.583
Score Profile
5.583 = &#931 of 6.110
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495963 nef protein CD BLAST 2 GGKWSKRSIVGWPEIRE
5.314
Score Profile
5.314 = &#931 of 5.821
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.167
V 7&9 H 8-10 F 3-5
-0.065 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.055
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495960 nef protein CD BLAST 2 GGKWSKSSIVGWPEIRE
5.433
Score Profile
5.433 = &#931 of 5.833
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.172
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495957 nef protein CD BLAST 2 GGKWSKSSIVGWPAIRE
5.301
Score Profile
5.301 = &#931 of 5.828
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.299
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1495954 nef protein CD BLAST 2 GGKWSKSSVVGWPAIRE
5.408
Score Profile
5.408 = &#931 of 5.681
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1469314 nef protein CD BLAST 2 GGKLSKPSFPGWTRIRE
2.587
Score Profile
2.587 = &#931 of 4.664
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.196
V 7&9 H 8-10 F 3-5
-0.095 -0.382 -1.403
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
1263019 nef protein CD BLAST 2 GGKWSKSSIVGWPAVRE
5.380
Score Profile
5.380 = &#931 of 5.850
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.243
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
487258 nef CD BLAST 2 GSKWSKSSIVGWPEVRE
5.778
Score Profile
5.778 = &#931 of 6.136
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.130
V 7&9 H 8-10 F 3-5
-0.008 -0.220 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
487255 nef CD BLAST 2 GNKWSKCSTVGWPAIRE
5.675
Score Profile
5.675 = &#931 of 5.972
V 2&3 H 2&3 H 6-17
-0.122 0.000 -0.174
V 7&9 H 8-10 F 3-5
-0.001 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
554990 nef gene product CD BLAST 2 GGKWSKRSMSGWPAVRE
5.793
Score Profile
5.793 = &#931 of 5.846
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.046
V 7&9 H 8-10 F 3-5
-0.006 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.002
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
60237 premature stop codon [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKLGGWPTVRERM
3.915
Score Profile
3.915 = &#931 of 3.974
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.019
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.039
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
60116 premature stop codon [Human immunodeficiency virus 1] CD BLAST 2 GGKWSKLGGWPTVRERM
3.915
Score Profile
3.915 = &#931 of 3.974
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.019
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 -0.039
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
424641 nef protein CD BLAST 2 GGKWSKSSVVGWPTIRE
5.439
Score Profile
5.439 = &#931 of 5.731
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.262
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
424623 nef protein CD BLAST 2 GGKWSKSSVVGWPTIRE
5.439
Score Profile
5.439 = &#931 of 5.731
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.262
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
424578 nef protein CD BLAST 2 GGKWSKSSVVGWPTIRE
5.439
Score Profile
5.439 = &#931 of 5.731
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.262
V 7&9 H 8-10 F 3-5
-0.009 -0.021 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
328346 nef protein CD BLAST 2 GGKWSKSSMSGWPAIRE
5.761
Score Profile
5.761 = &#931 of 5.837
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.076
V 7&9 H 8-10 F 3-5
0.000 0.000 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE
328204 nef protein CD BLAST 2 GGKWSKSSKIGWPTIRE
5.193
Score Profile
5.193 = &#931 of 5.468
V 2&3 H 2&3 H 6-17
0.000 0.000 -0.098
V 7&9 H 8-10 F 3-5
0.000 -0.177 0.000
P 5&6 H2&5 V 2-11
0.000 0.000 0.000
SigEx I SigEx II SPP
0.000 0.000 0.000
0.000 RELIABLE