The PTS1 predictor
The learning set
Metaozan LH set
|
Identifier
|
Sequence
|
| Ce025#1 | CVWRLDWALGKL |
| Ce033#1 | ILWRMATMSASM |
| Ce036#1 | VAGQHRSLVARL |
| Ce039#1 | WHWKCFEHVARL |
| Ce051#1 | GEGAGFNQLAKL |
| Ce096#1* | DPNEAMQWLARL |
| Ce123#1 | LGGPAPEFWSSL |
| Ce145#5 | QPGSTAMRMSKL |
| Ce146#3 | AAPVRLVLGHKL |
| Ce147#1 | GKATGRRLKAKL |
| Ce148#2 | VVWPLHRLRASL |
| Ce149#2 | DRKGWTHQPSKL |
| Ce150#1 | AVSFLSMRRARL |
| Ce152#3 | GLSDSFYRRSML |
| Ce153#1 | LWTALLGRTCSL |
| Ce154#1 | AGSAFSSCRSKL |
| Ce155#2 | KQWTGKGGRSKL |
| Ce157#1 | RERHSYMQRAKL |
| Ce159#1 | NLEFWGMMRSKM |
| Ce161#2 | YGVGRELRQAKL |
| Ce167#1 | EGKIRTLLWCKL |
| Ce168#1 | DGAHREAPASKL |
| Ce169#1 | GFRGYMSGLCKL |
| Ce171 | RKLMSEECRGKL |
| Ce172 | MRREVVLLRAKI |
| Ce173#1 | TCARFGRLRAKV |
| Ce175#1 | RWRLGWSWRAML |
| Ce176 | WCWRAPNLGSKL |
| Ce179#2 | RTEPKLMLRASL |
| Ce182#1 | RGGGPCQWKAKL |
| Ce185#1 | GHAPSRPAKARL |
| Ce186#1 | VSCRCRRLQSRL |
| Ce187#1* | PDVRRCAGAAKL |
| Ce188#1 | GSTGWWLLQAKL |
| Ce190 | EHRRSSTSTAKL |
| Ce191 | VYTVPGTPRCSL |
| Ce192 | VYGGGVTRGHKL |
| Ce193 | CHVGSTPWRAAL |
| Ce194 | CALVGSHIRSRL |
| Ce195 | QCVHAEVHLARL |
| Ce196* | LVDPLITSRSML |
| Ce199#1 | RSEEMARSPAKL |
| Ce200#1 | RLEMARWPRFKM |
| Ce201 | CQVRGACGMAKL |
| Ce202 | RSGSMVELRARL |
| Ce204#1 | NYPQTARVCAKL |
| Ce205 | CVSDLGHIVHKL |
| Ce208 | GEKFRDAWRARL |
| CeD1#1 | IGRRMAPLRSSL |
| CeF#1* | LELVDPGMRAKL |
| Hs01 | IGLDWLVVISKL |
| Hs02 | GEYGVGLLWSKL |
| Hs03 | WGDPLIMPGSKL |
| Hs04 | SLLALAVQCSKL |
| Hs05 | RGMSWFSSNSKL |
| Hs06 | ALYGWWALGSKL |
| Hs07 | GNVGSAVTAAKL |
| Hs08 | KLTVRWAWRAKL |
| Hs09 | ERVSGRHPQAKL |
| Hs10 | GVEVLVPGTAKL |
| Hs11 | GPDPLMSILAKL |
| Hs12* | PVKCVRKRLSRL |
| Hs13 | ICDAIFQGGSRL |
| Hs14* | PVSWNWMVRSRL |
| Hs15 | IQTGGGRAISRL |
| Hs16 | RWDIPLRWWSRL |
| Hs17 | GAMGMLGGVSRL |
| Hs18 | GEALLGGFLSRL |
| Hs19 | PPNNIGCTASRL |
| Hs20* | VDPIVKVPESRL |
| Hs21 | LAGHAWKALSRL |
| Hs22* | ELVDPEGLRSRL |
| Hs23 | NNGRGKVVLSRL |
| Hs24 | LRHGVNGLWSRL |
| Hs25 | VRGGYLVRTARL |
| Hs26 | VAGQHRSLVARL |
| Hs27 | NGIEQGKKWARL |
| Hs28 | CWRDLPQMIARL |
| Hs29 | AILGGEYTMARL |
| Hs30* | KEILELVDPARL |
| Hs31 | SPYTGGSLSCKL |
| Hs32 | MQIEHSLPFCRL |
| Hs33 | LVPLYHLIPCRL |
| Hs34 | FWSYWMVESCRL |
| Hs35 | VSGWGAGGMSRM |
| Hs36 | VWREGWGVRARM |
| Hs37 | PLTPRCILICRM |
| Hs38 | QDWAGLPLRSHL |
| Hs39 | KEEWPWGYRAHM |
| Hs40 | EGLIVMLERGKL |
| Hs41* | LVDPLYILWGRL |
| Hs42 | YCYVLRVGGGRL |
| Hs43* | LVDPFQVMFGRL |
| Hs44 | MGMCTGMLWPRL |
| Hs45* | KEILELVDPPRL |
| Hs46 | EQSGDSGLKPKM |
| Hs47* | PAYRLVAVLANL |
| Hs48 | WSMELTPIWCNL |
| Hs49 | SNMSLTFMSPNL |
| Hs50 | IAMNCVQVKSQL |
| Hs51 | WARYENIMSSQL |
| Hs52* | VDPSERRLRSML |
| Hs53* | LVDPLGPLFSML |
| Hs54 | TTMRGDTLTSLL |
| Hs55 | RGMGFPAVRSLL |
| Hs56 | CRSGLPCLQSLL |
| Hs57 | RAGQGTMWRSLL |
| Hs58 | VEYMMKWPRALL |
| Hs59 | SWSRSRLVSALL |
| Hs60 | GRDRTSVVRCLL |
| Hs61 | VVGVGGCVKSYL |
| Hs62 | LGNFGVSLCSSL |
| Hs63 | NGQVRDWCRPSL |
| Hs64 | RIASNCNLVSAL |
| Hs65 | MVVRMNPLKCVL |
* random C-terminus shorter than 12 residues
Metazoan SW set
|
SPROT-ID(AC)
|
Sequence
|
| ADAS_CAEEL (O45218) | LIDIIGSPHCKL |
| ADAS_DROME (Q9V778) | PPTSSTPPKAKL |
| AK11_RAT (Q62924) | REDGKWAMSCRL |
| AMAC_HUMAN (Q9UHK6) | KIIESNKVKASL |
| AMAC_MOUSE (O09174) | RIVESDKLKANL |
| AMAC_RAT (P70473) | RIIESNKLKANL |
| AOPP_HUMAN (P30044) | TCSLAPNIISQL |
| AOPP_MOUSE (P99029) | TCSLAPNILSQL |
| CACP_COLLI (P52826) | RSLLQSAPKSKL |
| CACP_HUMAN (P43155) | RALLQSHPRAKL |
| CACP_MOUSE (P47934) | RTLLQNHPRAKL |
| CAOP_CAEEL (P34355) | VEKYLKPMTSKL |
| CAOP_HUMAN (Q15067) | SYKHLKSLQSKL |
| CAOP_RAT (P07872) | YHKHLKPLQSKL |
| CAOQ_RAT (Q63448) | NKSVANRLKSQL |
| CATA_ASCSU (P90682) | KNISNLAKYCKY |
| CATA_BRARE (Q9PT92) | GGASAVAAASKM |
| CATA_CANFA (O97492) | GSHLAAREKANL |
| CATA_CAVPO (Q64405) | GSHLSAKEKANL |
| CATA_DROME (P17336) | TEELNLAKSSKF |
| CATA_HUMAN (P04040) | GSHLAAREKANL |
| CATA_MOUSE (P24270) | GSHMAAKGKANL |
| CATA_RANRU (Q9PWF7) | SAHVTANDKANL |
| CATA_RAT (P04762) | GSHIAAKGKANL |
| DAPT_HUMAN (O15228) | KTPIGKPATAKL |
| DAPT_MOUSE (P98192) | KKPIGKPATAKL |
| DAPT_RAT (Q9ES71) | KKPIGKPATAKL |
| ECH1_HUMAN (Q13011) | NKELKTVTFSKL |
| ECH1_MOUSE (O35459) | KRDTKSITFSKL |
| ECH1_RAT (Q62651) | KKDSKSITFSKL |
| ECHP_CAVPO (P55100) | WQSLAGLPSSKL |
| ECHP_HUMAN (Q08426) | WQSLAGSPSSKL |
| ECHP_RAT (P07896) | WQSLAGPHGSKL |
| HAO1_HUMAN (Q9UJM8) | LVRKNPLAVSKI |
| HAO1_MOUSE (Q9WU19) | LVRKNPLAVSKI |
| HAO2_HUMAN (Q9NYQ3) | EINRNLVQFSRL |
| HAO3_HUMAN (Q9NYQ2) | EISPDLIQFSRL |
| HAO3_MOUSE (Q9JI00) | EISPDLIQFSRL |
| HAO3_RAT (Q07523) | EISPDLIQFSRL |
| HMGL_BOVIN (Q29448) | TNSKVAQATCKL |
| HMGL_CHICK (P35915) | TNSKVSQAACRL |
| HMGL_HUMAN (P35914) | TSSKVAQATCKL |
| HMGL_MOUSE (P38060) | TSSKVAQATCKL |
| HMGL_RAT (P97519) | TSSKVAQATCKL |
| HYES_HUMAN (P34913) | SDARNPPVVSKM |
| HYES_MOUSE (P34914) | TEVQNPSVTSKI |
| HYES_RAT (P80299) | TEIQNPSVTSKI |
| IDHC_HUMAN (O75874) | ENLKIKLAQAKL |
| IDHC_MICME (Q9Z2K9) | ENLKAKLAQAKL |
| IDHC_MICOH (Q9Z2K8) | ENLKAKLAQAKL |
| IDHC_MOUSE (O88844) | ENLKAKLAQAKL |
| IDHC_RAT (P41562) | ENLKAKLAQAKL |
| IDI1_HUMAN (Q13907) | NQFVDHEKIYRM |
| IDI1_MESAU (O35586) | SQFVDHEKIHRM |
| IDI1_MOUSE (P58044) | SPFVDHEKIHRL |
| IDI1_RAT (O35760) | SPFVDHEKIHRM |
| LUCI_LUCCR (P13129) | IREILKKPVAKM |
| LUCI_LUCLA (Q01158) | IREILKKPVAKM |
| LUCI_PHOPY (P08659) | LIKAKKGGKSKL |
| NLTP_CHICK (Q07598) | QNLQLQPGKAKL |
| NLTP_HUMAN (P22307) | QNLQLQPGNAKL |
| NLTP_MOUSE (P32020) | QNLQLQPGKAKL |
| NLTP_RAT (P11915) | QSLQLQPDKAKL |
| O55223 (O55223) | MSRFSTLSKAHL |
| OXDA_HUMAN (P14920) | EKKLSRMPPSHL |
| OXDA_MOUSE (P18894) | EKKLSRLPPSHL |
| OXDA_PIG (P00371) | ERNLLTMPPSHL |
| OXDA_RABIT (P22942) | EKKSSRMPPSHL |
| OXDA_RAT (O35078) | EKNLSRMPPSHL |
| OXDD_BOVIN (P31228) | QVLRTPAPKSKL |
| OXDD_HUMAN (Q99489) | HALRTPIPKSNL |
| P79371 (P79371) | ISRFPSLGKAHL |
| PECI_HUMAN (O75521) | AVVNFLSRKSKL |
| PECI_MOUSE (Q9WUR2) | AIMSFVSRKPKL |
| PMVK_HUMAN (Q15126) | LENLIEFIRSRL |
| PTE1_HUMAN (O14734) | IRVKPQVSESKL |
| PTE1_MOUSE (P58137) | IRLKPQVSESKL |
| PTE2_HUMAN (P49753) | LGGREGTIPSKV |
| PTE2_MOUSE (Q9QYR7) | LDGKKKTIPAKL |
| Q27757 (Q27757) | LRQMFEKHKSKL |
| Q99424 (Q99424) | IRPLLQSWRSKL |
| SPYA_CALJA (P31029) | REALQHCPKKKL |
| SPYA_FELCA (P41689) | QEALQRCSRNKL |
| SPYA_HUMAN (P21549) | RAALQHCPKKKL |
| SPYA_MOUSE (O35423) | REALQHCPKNKL |
| SPYA_RABIT (P31030) | REALQHCAQSQL |
| SPYA_RAT (P09139) | REALQHCPKNKL |
| URIC_DROME (P16163) | AQLARKNINSHL |
| URIC_DROPS (P22673) | AQLARKNISSHL |
| URIC_DROSU (O44111) | AQLARKNLNSHL |
| URIC_DROVI (P23194) | AQLSRKSLKSHL |
| URIC_MOUSE (P25688) | TGTVKRKLPSRL |
| URIC_PAPHA (P25689) | TGTVKRKLSSRL |
| URIC_PIG (P16164) | TGTVKRKLTSRL |
| URIC_RABIT (P11645) | TGTVKRKLSSRL |
| URIC_RAT (P09118) | TGTVRRKLPSRL |
Fungal LH set
|
Identifier
|
Sequence
|
| Sc01* | LELVDPCERSKL |
| Sc02 | RMDATKRRESKL |
| Sc03* | VDPRCLARISKL |
| Sc04 | LSRGRSVSRSRL |
| Sc05 | AVHGTFSWRSRL |
| Sc06 | NGWGFMTRLSRL |
| Sc07 | NGRDRGGWWAKL |
| Sc08 | LSANALGGLAKL |
| Sc09 | RSGRQGGGFAKL |
| Sc10 | GWDWAVSPRAKL |
| Sc11 | RDRGTGQGLARL |
| Sc12 | WTRDGSHRMARL |
| Sc13 | SLLGGAAGWARL |
| Sc14 | SGSAVCSRVCRL |
| Sc15 | EWEEKSFIKCRL |
| Sc16 | STGKRSRSGAHL |
| Sc17 | VAWVPRKRVCHL |
| Sc18* | PSGGVVARAAKM |
| Sc19 | WRATGVSRQAKF |
| Sc20 | SSCCVQTPKAKF |
| Sc21 | RAPGGVGHKCNL |
| Sc22 | ETKGLNAVYGKL |
| Sc23 | EWFPVYNRSTKL |
| Sc24 | GSESHGSARQKL |
| Sc25 | KAGEIPGRMHRL |
| Sc26 | RRQWSTGRKLKL |
| Sc27 | GPGCCRRRDLKL |
| Sc28 | TWGPCDGRRVKL |
| Sc29 | ERSVRHRREFRL |
| Sc30 | ELGISGARWYKL |
| Sc31 | IWDGSRTWAPKL |
| Sc32* | PVWVSLGRRWKL |
| Sc33 | PLVGRKGGPWKL |
| Sc34 | GGIGRKSCGWKL |
| Sc35 | SMNGYQRRQWRL |
* random C-terminus shorter than 12 residues
Fungal SW set
|
Identifier
|
Sequence
|
| ACEA_ASHGO (O94198) | EEQFGSSNGAKL |
| ACEA_CANTR (P20014) | TEDQFKETKAKV |
| ACEA_COPCI (O13439) | AGVTESQFTSKL |
| ACEA_YARLI (P41555) | AGVTEDQFKSKL |
| AHP1_YEAST (P38013) | TVSSVESVLAHL |
| ALOX_CANBO (Q00922) | LKTYEQTGAARY |
| ALOX_PICAN (P04841) | LGTYEETGLARF |
| AOFN_ASPNG (P46882) | ELGTKREVKARL |
| CACP_CANTR (Q00614) | TKGLLTDAKPKL |
| CACP_YEAST (P32796) | ALENENKRKAKL |
| CATA_PICAN (P30263) | ELKRKASSPSKI |
| CATA_YEAST (P15202) | KHASELSSNSKF |
| CISZ_YEAST (P08679) | YKELVKNIESKL |
| DAS_PICAN (P06834) | KEKPNHDKVNKL |
| FAT2_YEAST (P38137) | TFAKSSRNKSKL |
| FOX2_CANTR (P22414) | AAIKLVGDKAKI |
| FOX2_YEAST (Q02207) | AAVKLSQAKSKL |
| MASY_EMENI (P28344) | NEISSPGTASKL |
| MASY_NEUCR (P28345) | TSAGNSLPASKL |
| MASY_YEAST (P30952) | STKATPTDLSKL |
| MASZ_YEAST (P21826) | KPSAKPVDLSKL |
| MDHP_YEAST (P32419) | KGKSFILDSSKL |
| O93884 (O93884) | LTEKPKHDQNHL |
| OXDA_FUSSO (P24552) | VDKVGKAAKSKL |
| OXDA_RHOTO (P80324) | QRYHGAARESKL |
| PEX8_PICAN (Q00925) | EHVNESQEKAKL |
| PEX8_PICPA (Q01962) | YENVNAQSTAKL |
| PEX8_YEAST (P53248) | YTTVLSSQSSKL |
| PTE1_YEAST (P41903) | VYGSERDIRAKF |
| PX18_CANMA (Q00680) | SVFKKLDPRPKL |
| PX18_CANTR (P22009) | AVFKKLDPRPKL |
| Q12598 (Q12598) | VVIEKIDADAKL |
| Q96VB8 (Q96VB8) | KKSPRGASKNKF |
| URIC_ASPFL (Q00511) | CTVGRSSLKSKL |
| URIC_EMENI (P33282) | KCTVGRKSKAKL |
| URIC_PICJA (P78609) | KCTVVRKEKTKL |
| VAOX_PENSI (P56216) | WPSQYSHVTWKL |
Remaining learning set sequences
|
Identifier
|
Sequence
|
| ACE1_SOYBN (P45456) | DRGSIVVAKARM |
| ACE2_SOYBN (P45457) | DRGSIVVAKARM |
| ACEA_ARATH (P28297) | EGTSLVVAKSRM |
| ACEA_BRANA (P25248) | EGTSLVVAKSRM |
| ACEA_CUCMA (P93110) | EEGSVVVAKSRM |
| ACEA_CUCSA (P49296) | EEGNVVVAKSRM |
| ACEA_DENCR (Q9SE26) | RGGITVNAKSRL |
| ACEA_GOSHI (P17069) | SEGNLVVAKARM |
| ACEA_LYCES (P49297) | GDGSVVIAKARM |
| ACEA_PINTA (Q43097) | IGAGTVLAKSRM |
| ACEA_RICCO (P15479) | SAGSEVVAKARM |
| ADAS_DICDI (O96759) | LFDVVNVKYPKL |
| ADAS_TRYBB (O97157) | KMGIPGALQAHL |
| CAT1_CUCPE (P48350) | KLASHLNVRPSI |
| CAT1_GOSHI (P17598) | KLASLLNVRPSI |
| CAT1_HORVU (P55307) | KLASRLKIKPNM |
| CAT1_LYCES (P30264) | KVASRLTVKPTM |
| CAT1_MAIZE (P18122) | KLPSRLNLKPSM |
| CAT1_NICPL (P49315) | KLASRLNVRPSI |
| CAT1_RICCO (Q01297) | KLATRLNVKPSI |
| CAT1_SOLTU (P49284) | KVASRLTVKPTM |
| CAT1_TOBAC (P49319) | KVASRLTLKPTM |
| CAT1_WHEAT (Q43206) | KLASRLSSKPSM |
| CAT2_ARATH (P25819) | KLASRLNVRPSI |
| CAT2_CUCPE (P48351) | KIASRMNARPNM |
| CAT2_GOSHI (P30567) | KIASRLNVRPSI |
| CAT2_HORVU (P55308) | KVANRLNVKPSM |
| CAT2_MAIZE (P12365) | KLASRLSAKPSM |
| CAT2_NICPL (P49316) | KVASRLTLKPTM |
| CAT2_RICCO (P49318) | KLASRLNVRPNI |
| CAT2_SOLTU (P55312) | KVASRLTVKPTM |
| CAT2_WHEAT (P55313) | KLASRLKIKPNM |
| CAT3_ARATH (Q42547) | KLASRLNVRPSI |
| CAT3_CUCPE (P48352) | KIASRLNVRPNI |
| CAT3_NICPL (P49317) | KIASRLNVRPTM |
| CATA_DICDI (O77229) | NDVIKFAARSNL |
| CATA_HELAN (P45739) | KIASRLNVKPNY |
| CATA_IPOBA (P07145) | KVASRLNIRPTM |
| CATA_ORYSA (P29611) | KIANRLNVKPSM |
| CATA_PEA (P25890) | KLASHLNMRPSI |
| CATA_PHAAU (P32290) | KIASHLNMRPNI |
| CATA_SECCE (P55310) | KVANRLNVKPSM |
| CATA_SOLME (P55311) | KVASRLLVKPTM |
| CATA_SOYBN (P29756) | KIASHLNLKPSI |
| CATA_TOXGO (Q9XZD5) | GLPTAACYPAKM |
| CATB_ORYSA (P55309) | KLASRLNLKPNM |
| DHAB_HORVU (Q40024) | ELYGWYQRPSKL |
| DHAB_ORYSA (O24174) | EPYGWYRPPSKL |
| G3PG_LEIME (Q27890) | YMAAKDAASSKM |
| G3PG_TRYBB (P22512) | RHMAARDRAAKL |
| G3PG_TRYCR (P22513) | RHMASKDRSARL |
| G6PI_TRYBB (P13377) | GLINMFNELSHL |
| GOX1_ARATH (Q9LRS0) | TEWDTPRHLPRL |
| GOX2_ARATH (Q9LRR9) | TEWDTPRPSARL |
| GOX_SPIOL (P05414) | WDGPSSRAVARL |
| GPDA_TRYBB (P90593) | EGLPALPRTSKM |
| GPDA_TRYBR (Q26756) | EGLPALPRTSKM |
| MASY_BRANA (P13244) | IVAHYPINASRL |
| MASY_CUCMA (P24571) | IVIHHPRELSRL |
| MASY_CUCSA (P08216) | IVIHHPRELSKL |
| MASY_GOSHI (P17432) | VIHHPKDVSSKL |
| MASY_MAIZE (P49081) | VAHHPGASPCKL |
| MASY_RAPSA (Q43827) | IVAHYPINVSRL |
| MASY_RICCO (P17815) | IVIHYPKGSSRL |
| MASY_SOYBN (P45458) | IVVHHPRETSKL |
| PGKC_TRYBB (P07378) | GTGTLSNRWSSL |
| URIC_ARATH (O04420) | IEATLSRITSKL |
| URIC_CANLI (P34798) | IQASLRRLWSKL |
| URIC_PHAVU (P53763) | IEASLSRVWSKL |
| URIC_SOYBN (P04670) | IQASLSRLWSKL |
| URID_CANLI (P34799) | IQASLSRLWSKL |
| URID_SOYBN (O04104) | IQASLSRLWSKL |
Gapless alignments of the 12 C-terminal resudues in clustalx colors:
Secondary structure prediction
using the PREDATOR program
Search for low complexity regions
[12-2.2-2.5]
[25-3.0-3.3]
[45-3.4-3.75]
using the SEG program
