Predicted myristoylation in ./8468VIswissprot.fa

	MYRbase Swissprot - Viruses

	EvOluation of proteome-wide predictions of glycine myristoylation

Clusters 1-20 >> next

Evaluated database entries: 8468
Predicted entries: 258 (214 RELIABLE and 44 TWILIGHT ZONE)
Clusters of predicted entries (with >40% identity): 54

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Homologous
Cluster Size

Protein Information

Pos.

Myristoylation Motif

Score

Prob.FPP

Prediction

^{~5 org.} 40 _{(40 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 120853 GAG polyprotein [Contains: Core protein P16; Core protein P26] [Human immunodeficiency virus type 2] CD BLAST

GARNSVLRGKKADELER

2.738

0.000

RELIABLE

^{~24 org.} 33 _{(33 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 548552 Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Core protein P2A; Core protein P2B; Core protein P2C; Core protein P3A; Genome-linked protein VPG (P3B); Picornain 3C (Protease 3C) (P3C); RNA-directed RNA polymerase (P3D)] [Coxsackievirus A24] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

GAQVSSQKVGAHENTNV

4.133

0.000

RELIABLE

^{~17 org.} 25 _{(25 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 120817 GAG polyprotein [Contains: Core protein P15; Core protein P12; Core protein P30; Core protein P10] [Feline leukemia virus] Ann.: MYRISTATE. CD BLAST

GQTVTTPLSLTLDHWSE

2.657

0.000

RELIABLE

^{~3 org.} 25 _{(26 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 128037 Negative factor (F-protein) (27 kDa protein) (3'ORF) [Human immunodeficiency virus type 1] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

GGKWSKRSVVGWPTVRE

5.435

0.000

RELIABLE

^{~2 org.} 15 _{(15 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 400444 Negative factor (F-protein) (27 kDa protein) (3'ORF) [Simian immunodeficiency virus] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

GGTISMRRSRSTGDLRQ

3.006

0.000

RELIABLE

^{~2 org.} 14 _{(25 tot.)}

SWISSPROT - 138797 Major surface antigen precursor [Hepatitis B virus] CD BLAST

GGWSSKPRQGMGTNLSV

1.157

0.001

RELIABLE

^{~3 org.} 8 _{(11 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 125706 Tyrosine-protein kinase transforming protein SRC (P60-SRC) [Avian sarcoma virus] Ann.: MYRISTATE. CD BLAST

GSSKSKPKDPSQRRRSL

6.555

0.000

RELIABLE

^{~8 org.} 8 _{(10 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 130488 Genome polyprotein [Contains: Coat proteins VP1 TO VP4; Core proteins P2A TO P2C, P3A; Genome-linked protein VPG; Picornain 3C (Protease 3C) (P3C); RNA-directed RNA polymerase P3D ] [Human rhinovirus 89] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

GAQVSRQNVGTHSTQNS

4.020

0.000

RELIABLE

^{~4 org.} 8 _{(8 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 130525 Genome polyprotein [Contains: Coat proteins VP1 TO VP4; Core proteins P2A TO P2C, P3A; Genome-linked protein VPG; Picornain 3C (Protease 3C) (P3C); RNA-directed RNA polymerase P3D ] [Theiler] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

GNASSSDKSNSQSSGNE

1.181

0.001

RELIABLE

^{~4 org.} 6 _{(6 tot.)}

SWISSPROT - 138359 Glycoprotein polyprotein precursor [Contains: Glycoprotein G1; Glycoprotein G2] [Pichinde arenavirus] CD BLAST

GQIVTLIQSIPEVLQEV

-1.390

0.018

TWILIGHT ZONE

^{~2 org.} 5 _{(11 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 1346741 Genome polyprotein [Contains: Nonstructural protein P20A; Coat proteins VP1 TO VP4; Core proteins X, P14, P41, P19; Genome-linked proteins VPG1 TO VPG3; Picornain 3C (Protease 3C) (P3C); RNA-directed RNA polymerase ] [Foot-and-mouth disease virus] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

202

GAGQSSPATGSQNQSGN

1.405

0.001

RELIABLE

^{~3 org.} 4 _{(4 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 128053 Negative factor (F-protein) (27 kDa protein) (3'ORF) [Simian immunodeficiency virus] Ann.: MYRISTATE (BY SIMILARITY). CD BLAST

GSQNSKPAHKKYSKLWQ

4.806

0.000

RELIABLE

^{~3 org.} 4 _{(4 tot.)}

SWISSPROT - 138624 Protein L1 (Protein F2) [Vaccinia virus] CD BLAST

GAAASIQTTVNTLSERI

1.247

0.001

RELIABLE

^{~3 org.} 3 _{(3 tot.)}

SWISSPROT - 120893 GAG polyprotein (Core polyprotein) [Contains: Core protein P10; Core phosphoprotein P18; Core protein P12; Core protein P27; Core protein P14; Core protein P4] [Simian retrovirus SRV-1] CD BLAST

GQELSQHERYVEQLKQA

-0.860

0.012

TWILIGHT ZONE

^{~1 org.} 3 _{(4 tot.)}

SWISSPROT - 120857 GAG polyprotein [Contains: Major core proteins P19 and P24; Nucleic acid-binding protein P15] [Human T-cell leukemia virus type I] CD BLAST

GQIFSRSASPIPRPPRG

3.072

0.000

RELIABLE

^{~2 org.} 3 _{(3 tot.)}

SWISSPROT - 1717982 Hypothetical protein U71 [Human herpesvirus] CD BLAST

GTKCCKPVSCGMCKKTE

-1.227

0.016

TWILIGHT ZONE

^{~2 org.} 3 _{(4 tot.)}

SWISSPROT - 138719 MAJOR VIRION STRUCTURAL PROTEIN MU-1/MU-1C (VERSION 1) [Reovirus] CD BLAST

GNASSIVQTINVTGDGN

-0.793

0.011

TWILIGHT ZONE

^{~2 org.} 3 _{(4 tot.)}

SWISSPROT - 116651 Coat protein VP2 [Contains: Coat protein VP3] [Simian virus 40] CD BLAST

GAALTLLGDLIATVSEA

-1.029

0.013

TWILIGHT ZONE

^{~3 org.} 3 _{(3 tot.)}

SWISSPROT - 137353 Protein A16 [Vaccinia virus] CD BLAST

GAAVTLNRIKIAPGIAD

-1.776

0.024

TWILIGHT ZONE

^{~1 org.} 2 _{(2 tot.)}
_{+SW MYR-Ann.}

SWISSPROT - 120813 GAG polyprotein [Contains: Core protein P15 (Matrix protein); Core protein P24; Core protein P12] [Bovine leukemia virus] Ann.: MYRISTATE. CD BLAST

GNSPSYNPPAGISPSDW

1.793

0.001

RELIABLE

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