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The self-consistency-test of the plant learning set

Contact:
Birgit Eisenhaber (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)
Carolyn Schultz (University of Adelaide/Australia)
Paul Dupree and Georg Borner (University of Cambridge/UK)


 Description of the Prediction Function

Summary Table:

  Prediction Quality Rate Percentage
1:P 215/219 98.17%
1:S 3/219 1.37%
1:S (positive Total Score) 3/219 1.37%
1:S (negative Total Score) - 0.00%
1:I 1/219 0.46%
1:N - 0.00%
Not Predicted 1/219 0.46%
Predicted 218/219 99.54%

N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
1 AGP1_NICAL 132 1:P 108 20.26 -3.30 16.96 2.415130e-07
2 AGP1_PYRCO 145 1:P 121 12.63 -1.17 11.46 5.310598e-06
3 AGP_PINTA 168 1:P 145 17.34 -0.33 17.01 2.344030e-07
4 AGP_BRANA 136 1:P 113 13.83 -3.01 10.82 7.293726e-06
5 AGP_LYCES 215 1:P 192 14.09 -3.45 10.64 7.965710e-06
6 AGP_GOSBA 214 1:P 188 13.97 -7.48 6.49 5.006348e-05
7 AGP1_ARATH 131 1:P 108 11.81 -0.06 11.75 4.588110e-06
8 AGP2_ARATH 126 1:P 102 20.93 -1.04 19.89 3.425805e-08
9 AGP3_ARATH 139 1:P 116 13.57 -0.86 12.71 2.799657e-06
10 AGP4_ARATH 135 1:P 111 22.16 -2.16 20.00 3.160536e-08
11 AGP5_ARATH 133 1:P 109 20.29 -1.03 19.26 5.297011e-08
12 AGP6_ARATH 150 1:P 126 17.29 -6.07 11.22 5.972834e-06
13 AGP7_ARATH 130 1:P 106 19.68 -1.05 18.63 8.158456e-08
14 AGP8_ARATH 323 1:P 295 16.81 -1.36 15.45 6.060250e-07
15 AGP9_ARATH 191 1:P 172 12.83 -2.62 10.21 9.768812e-06
16 AG10_ARATH 127 1:P 107 15.92 -2.50 13.42 1.913372e-06
17 AG11_ARATH 136 1:P 112 15.76 -3.48 12.28 3.494692e-06
18 AG12_ARATH 60 1:P 33 9.61 -7.02 2.59 2.144392e-04
19 AG13_ARATH 59 1:P 38 15.31 -4.72 10.59 8.140760e-06
20 AG14_ARATH 60 1:P 38 16.69 -6.90 9.79 1.187008e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
21 AG15_ARATH 61 1:P 35 21.13 -1.75 19.38 4.898819e-08
22 AG21_ARATH 58 1:P 36 15.61 -2.53 13.08 2.291733e-06
23 AG22_ARATH 63 1:P 38 12.46 -1.55 10.91 6.962598e-06
24 AG27_ARATH 125 1:P 98 12.16 -4.68 7.48 3.317560e-05
25 NP_568930.1 456 1:P 431 19.08 -0.78 18.30 1.019147e-07
26 BAB02996.1 442 1:P 418 17.15 -0.73 16.42 3.370452e-07
27 NP_186870.1 452 1:P 426 11.20 -5.08 6.12 5.793040e-05
28 T06041 717 1:P 685 10.74 -4.19 6.55 4.870229e-05
29 NP_188311.1 653 1:P 628 11.66 -3.67 7.99 2.666751e-05
30 NO16_MEDTR 180 1:P 153 17.22 -0.88 16.34 3.555076e-07
31 NO5_PEA 135 1:P 111 19.85 -0.88 18.97 6.495231e-08
32 O23120 144 1:P 120 12.00 -1.04 10.96 6.810274e-06
33 Q9SUC9 304 1:P 282 17.51 -6.50 11.01 6.639663e-06
34 O22272 194 1:P 164 16.89 -5.83 11.06 6.490063e-06
35 O49586 278 1:P 255 17.44 -1.08 16.36 3.501847e-07
36 O48915 219 1:P 195 13.39 -1.09 12.30 3.454703e-06
37 Q9T0I0 256 1:P 233 14.06 -1.23 12.83 2.618685e-06
38 Q9LE56 180 1:P 158 20.09 -1.08 19.01 6.284218e-08
39 Q9SQN9 192 1:P 166 18.73 -4.00 14.73 9.214194e-07
40 Q9T076 349 1:P 326 14.52 -0.28 14.24 1.212966e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
41 Q9ZWA8 247 1:P 224 14.59 -0.40 14.19 1.250229e-06
42 O64696 401 1:P 382 12.73 -1.28 11.45 5.332528e-06
43 Q40315 259 1:P 236 18.45 -0.82 17.63 1.571615e-07
44 Q9ZTU7 176 1:P 153 22.06 -0.11 21.95 7.505205e-09
45 Q9SPI6 165 1:P 141 16.44 -2.55 13.89 1.476797e-06
46 Q9LEF2 137 1:P 112 20.11 -0.16 19.95 3.286028e-08
47 Q41072 264 1:P 235 17.28 -0.28 17.00 2.355641e-07
48 O49645 140 1:P 118 15.23 -0.04 15.19 7.054315e-07
49 Q96403 182 1:P 160 20.56 -1.55 19.01 6.293243e-08
50 Q9FMI9 173 1:P 144 16.52 -2.86 13.66 1.676305e-06
51 Q9FM36 130 1:P 109 15.70 -0.05 15.65 5.364610e-07
52 Q9FKT1 168 1:P 144 13.85 -1.65 12.20 3.645513e-06
53 Q9ZWN0 169 1:S 144 7.66 -6.41 1.25 3.352964e-04
54 Q9FJ12 162 1:P 139 15.97 -0.37 15.60 5.539111e-07
55 Q9ZNX8 166 1:P 142 17.00 -0.89 16.11 4.082212e-07
56 Q9FHN6 592 1:P 564 13.78 -4.19 9.59 1.302712e-05
57 Q9FHD5 286 1:P 261 11.40 -3.46 7.94 2.731906e-05
58 Q9LVN0 750 1:P 728 15.54 -0.44 15.10 7.444868e-07
59 Q9LVB5 223 1:P 196 24.41 -0.71 23.70 1.858257e-09
60 Q9LTY9 132 1:P 108 19.61 -1.35 18.26 1.041891e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
61 Q9FGT5 477 1:P 455 14.12 -1.79 12.33 3.408535e-06
62 Q9FGH4 476 1:P 453 12.65 -3.81 8.84 1.838499e-05
63 Q9FXS4 184 1:P 162 20.01 -0.59 19.42 4.760060e-08
64 Q9SY22 239 1:P 216 17.73 -0.16 17.57 1.639646e-07
65 O82227 207 1:P 182 15.08 -4.01 11.07 6.444261e-06
66 O82260 136 1:P 108 19.68 -4.07 15.61 5.511601e-07
67 O82761 200 1:P 177 16.68 -2.33 14.35 1.145833e-06
68 O82318 960 1:P 943 12.02 -1.38 10.64 7.932590e-06
69 Q9ZVC7 159 1:P 132 14.11 -3.03 11.08 6.411561e-06
70 Q9SLG3 339 1:P 314 8.66 -2.23 6.43 5.127890e-05
71 Q9SKU7 181 1:P 153 13.96 -1.17 12.79 2.672529e-06
72 Q9ZQ23 280 1:P 256 20.10 -1.52 18.58 8.451990e-08
73 Q9SR10 159 1:P 137 16.24 0.00 16.24 3.770785e-07
74 Q9SQR1 491 1:P 465 14.75 -1.77 12.98 2.417144e-06
75 Q9FZD0 197 1:P 172 13.83 -0.56 13.27 2.076090e-06
76 Q9AUW1 165 1:P 139 18.61 -0.64 17.97 1.264808e-07
77 Q9LM00 236 1:P 208 18.11 -0.42 17.69 1.514542e-07
78 Q9XHM2 191 1:P 168 15.69 -0.33 15.36 6.378967e-07
79 Q9SP18 498 1:P 475 18.85 -0.95 17.90 1.324222e-07
80 Q9FPD6 492 1:P 466 11.97 -0.87 11.10 6.337929e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
81 Q9SD15 518 1:P 497 14.90 -2.42 12.48 3.156229e-06
82 Q9SD14 475 1:P 449 10.83 0.00 10.83 7.247040e-06
83 Q9LYH4 181 1:P 154 11.34 -3.48 7.86 2.822303e-05
84 Q9LXW3 376 1:P 350 16.49 -2.32 14.17 1.262525e-06
85 Q9LJU1 203 1:P 179 20.10 -1.39 18.71 7.724964e-08
86 Q9LJT9 255 1:P 231 14.34 -1.94 12.40 3.285362e-06
87 Q9LJ42 449 1:P 429 12.01 -2.68 9.33 1.472297e-05
88 Q9LX04 593 1:P 570 21.07 -0.21 20.86 1.692980e-08
89 Q9AXA4 494 1:P 471 11.45 -3.63 7.82 2.873278e-05
90 Q41178 202 1:P 179 14.11 -1.41 12.70 2.809141e-06
91 Q39777 263 1:P 235 14.95 -1.59 13.36 1.977628e-06
92 O04529 378 1:P 356 9.79 -0.37 9.42 1.413705e-05
93 Q9C9B1 193 1:P 169 13.15 -2.27 10.88 7.058630e-06
94 Q9C8S1 407 1:P 385 10.50 -5.09 5.41 7.660791e-05
95 Q9FFH6 247 1:P 224 15.69 -0.01 15.68 5.278481e-07
96 Q9FHX5 425 1:P 401 13.69 -0.14 13.55 1.784927e-06
97 Q9ASI5 159 1:P 129 13.15 -0.58 12.57 3.002509e-06
98 Q9M7Y1 147 1:P 127 15.63 -1.22 14.41 1.106196e-06
99 Q9FT76 164 1:P 138 16.39 -0.94 15.45 6.067501e-07
100 Q94LQ4 355 1:P 330 14.40 -3.32 11.08 6.400531e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
101 Q94HS3 389 1:P 362 14.96 -0.82 14.14 1.288427e-06
102 Q94HS1 325 1:P 298 18.19 -12.05 6.14 5.751862e-05
103 Q94AQ4 84 1:P 58 17.63 -0.27 17.36 1.873755e-07
104 Q949E8 202 1:P 181 14.17 -0.86 13.31 2.030225e-06
105 Q93ZH0 416 1:P 391 13.99 -1.61 12.38 3.317849e-06
106 Q93Z89 357 1:P 330 10.84 -0.86 9.98 1.088344e-05
107 Q93YI5 198 1:P 172 17.13 -0.86 16.27 3.700579e-07
108 Q93XX5 426 1:P 404 10.71 -2.82 7.89 2.789712e-05
109 Q9S7S5 87 1:P 64 14.68 -1.30 13.38 1.956909e-06
110 Q93Z04 501 1:P 474 12.82 -0.67 12.15 3.732833e-06
111 Q9M267 117 1:P 86 14.98 -0.08 14.90 8.362888e-07
112 Q07634 119 1:P 91 14.78 -0.85 13.93 1.441476e-06
113 Q8W0R0 493 1:P 466 21.05 -5.30 15.75 5.082398e-07
114 Q8VYV9 513 1:P 493 17.49 -0.99 16.50 3.217152e-07
115 Q8VY12 438 1:P 409 13.07 -8.52 4.55 1.063198e-04
116 T20M3.11 485 1:P 461 15.12 -7.10 8.02 2.637664e-05
117 F15H11.23 135 1:P 111 17.30 -0.86 16.44 3.335752e-07
118 T20P8.18 176 1:P 149 14.11 -3.03 11.08 6.411561e-06
119 MOE17.14 62 1:P 35 20.41 -0.01 20.40 2.372561e-08
120 MPE11.5 128 1:P 104 16.35 -13.81 2.54 2.183158e-04
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
121 F24M12.370 529 1:P 504 9.30 -1.81 7.49 3.304501e-05
122 T4D2.120 483 1:P 451 10.04 -5.35 4.69 1.007032e-04
123 T15B16.19 144 1:P 113 7.99 -2.41 5.58 7.169233e-05
124 FCAALL.170 156 1:P 128 10.63 -1.73 8.90 1.787854e-05
125 F20O9.4 199 1:P 179 16.23 -3.94 12.29 3.487477e-06
126 T16L4.1 76 1:P 55 7.42 -3.57 3.85 1.377003e-04
127 T10C21.20 102 1:P 75 10.99 -2.17 8.82 1.853133e-05
128 T1A4.70 116 1:P 89 12.68 -0.72 11.96 4.115085e-06
129 T11H3.100 186 1:P 164 18.80 -1.51 17.29 1.964664e-07
130 1885.m00146 148 1:P 127 13.50 -1.19 12.31 3.453438e-06
131 1921.m00146 65 1:P 39 18.39 -0.21 18.18 1.104160e-07
132 3407.m00213 150 1:P 121 17.48 -0.28 17.20 2.079348e-07
133 3430.m00132 203 1:P 180 20.14 -0.55 19.59 4.215964e-08
134 3430.m00133 170 1:P 143 11.84 -1.63 10.21 9.752242e-06
135 3459.m00160 149 1:P 126 15.11 -1.25 13.86 1.500168e-06
136 2728.m00152 224 1:P 194 21.46 -2.78 18.68 7.911538e-08
137 1947.m00148 483 1:P 460 15.32 -2.67 12.65 2.887128e-06
138 2736.m00141 175 1:P 151 7.74 -0.99 6.75 4.494368e-05
139 3540.m00086 603 1:P 573 13.16 -2.17 10.99 6.707428e-06
140 3544.m00160 478 1:P 450 16.04 -0.02 16.02 4.303589e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
141 1977.m00162 182 1:P 152 16.71 -1.90 14.81 8.800382e-07
142 3553.m00183 177 1:P 154 10.64 -2.22 8.42 2.212116e-05
143 3553.m00192 491 1:P 467 18.44 -1.49 16.95 2.436870e-07
144 2773.m00130 173 1:P 148 17.54 -1.06 16.48 3.254032e-07
145 2008.m00150 170 1:P 143 13.73 -0.38 13.35 1.990944e-06
146 2013.m00288 696 1:P 665 19.70 -0.20 19.50 4.508015e-08
147 2032.m00149 179 1:P 154 18.61 -0.72 17.89 1.332299e-07
148 2084.m00148 188 1:P 163 15.27 -1.27 14.00 1.390310e-06
149 2084.m00154 171 1:P 145 17.23 -2.46 14.77 9.022123e-07
150 2114.m00198 155 1:P 128 16.90 -0.03 16.87 2.562175e-07
151 3590.m00146 698 1:P 673 18.96 -0.78 18.18 1.099878e-07
152 2815.m00153 423 1:P 395 16.65 -12.60 4.05 1.277548e-04
153 3646.m00200 480 1:P 450 16.82 -1.20 15.62 5.460659e-07
154 3662.m00131 361 1:P 335 22.22 -0.75 21.47 1.075795e-08
155 2244.m00180 200 1:P 175 13.14 -10.40 2.74 2.033404e-04
156 3685.m00134 156 1:P 126 16.57 -1.15 15.42 6.166315e-07
157 3685.m00135 131 1:P 103 14.98 -2.71 12.27 3.518199e-06
158 3728.m00156 374 1:P 351 13.79 -0.56 13.23 2.118705e-06
159 3733.m00137 247 1:P 225 15.04 -12.22 2.82 1.979900e-04
160 2887.m00097 399 1:P 376 11.71 -4.24 7.47 3.337685e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
161 2887.m00100 70 1:P 46 19.43 -5.03 14.40 1.113956e-06
162 2896.m00106 208 1:P 183 14.84 -0.39 14.45 1.077209e-06
163 3780.m00146 291 1:S 265 4.93 -3.32 1.61 2.973022e-04
164 2323.m00184 468 1:P 438 16.56 -12.50 4.06 1.273243e-04
165 3806.m00137 221 1:P 194 9.35 -4.69 4.66 1.021969e-04
166 2330.m00180 145 1:P 128 11.52 -3.81 7.71 3.009704e-05
167 2964.m00128 461 1:P 431 16.56 -12.44 4.12 1.245446e-04
168 3835.m00134 128 1:P 99 12.08 -0.32 11.76 4.564920e-06
169 2366.m00156 181 1:P 158 13.51 -0.03 13.48 1.855468e-06
170 3863.m00230 211 1:P 185 14.60 -1.95 12.65 2.890755e-06
171 2434.m00145 351 1:P 324 14.19 -0.44 13.75 1.594781e-06
172 2439.m00145 767 1:P 740 17.80 -2.10 15.70 5.222089e-07
173 3032.m00075 411 1:P 382 17.41 -0.26 17.15 2.140154e-07
174 3038.m00130 188 1:P 163 18.90 -0.46 18.44 9.263493e-08
175 3038.m00133 190 1:P 165 17.21 -0.76 16.45 3.311345e-07
176 3903.m00197 516 1:P 489 7.90 -2.02 5.88 6.376709e-05
177 3920.m00220 271 1:P 246 14.88 -1.95 12.93 2.492800e-06
178 3920.m00222 257 1:P 236 18.72 -12.01 6.71 4.569546e-05
179 2457.m00129 183 1:P 161 17.13 -2.22 14.91 8.322852e-07
180 3050.m00125 253 1:P 228 17.72 -5.91 11.81 4.441597e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
181 2506.m00134 69 1:P 40 16.39 -2.14 14.25 1.206551e-06
182 3108.m00136 172 1:P 147 18.54 -0.54 18.00 1.235170e-07
183 3108.m00137 181 1:P 156 18.74 -1.16 17.58 1.629575e-07
184 3108.m00145 537 1:P 512 6.46 -1.22 5.24 8.187473e-05
185 3111.m00145 778 1:P 753 17.10 -0.29 16.81 2.644418e-07
186 4130.m00165 492 1:P 471 17.61 -1.24 16.37 3.473800e-07
187 3131.m00122 331 1:P 306 21.86 -0.02 21.84 8.170362e-09
188 3214.m00173 551 1:P 523 19.74 -0.97 18.77 7.416399e-08
189 4145.m00200 468 1:P 443 19.73 -0.74 18.99 6.404463e-08
190 2534.m00201 266 1:P 238 15.90 -1.06 14.84 8.663407e-07
191 3223.m00186 165 1:P 142 12.79 -0.48 12.31 3.438932e-06
192 2567.m00164 247 1:P 221 14.15 -0.56 13.59 1.746362e-06
193 3257.m00090 235 1:P 214 21.32 -13.42 7.90 2.772495e-05
194 3274.m00177 278 1:P 253 17.91 -2.08 15.83 4.836121e-07
195 3321.m00225 181 1:P 153 16.66 -4.00 12.66 2.867204e-06
196 3323.m00125 63 1:P 36 18.93 -0.33 18.60 8.324355e-08
197 CAA74765.1 661 1:I 637 6.02 -21.17 -15.15 1.486889e-02
198 CAB82694.1 422 1:P 398 15.40 -4.96 10.44 8.730674e-06
199 AAB82617.1 420 1:P 392 16.56 -1.34 15.22 6.940608e-07
200 BAB09240.1 424 1:P 398 9.96 -1.81 8.15 2.494549e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
201 AAD55298.1 695 1:P 665 17.92 -1.18 16.74 2.762479e-07
202 BAA97210.1 696 1:P 672 20.16 -1.86 18.30 1.016945e-07
203 BAB08565.1 736 1:P 712 12.01 -4.49 7.52 3.267140e-05
204 CAB36515.1 770 1:P 746 13.91 -3.10 10.81 7.309804e-06
205 NP_197891.1 186 1:P 164 18.80 -1.51 17.29 1.964664e-07
206 CAA78771.1 196 1:P 174 19.11 -1.50 17.61 1.596242e-07
207 AAD23007.1 176 1:P 154 13.07 -3.79 9.28 1.504901e-05
208 AAC27480.1 202 1:P 178 17.68 -0.84 16.84 2.596617e-07
209 NP_176703 475 1:S 449 9.03 -8.12 0.91 3.737808e-04
210 CAB41712.1 587 1:P 562 16.93 -6.79 10.14 1.009186e-05
211 NP_565269.1 501 1:P 470 7.39 -3.41 3.98 1.309583e-04
212 NP_187965.1 505 1:P 473 7.54 -4.26 3.28 1.686170e-04
213 AAF02148.1 252 1:P 226 14.95 -0.66 14.29 1.181361e-06
214 NP_197424.1 189 1:P 164 17.78 -15.13 2.65 2.102538e-04
215 BAB01476.1 203 1:P 181 19.11 -0.84 18.27 1.036879e-07
216 NP_194254.2 589 1:P 563 14.43 -4.90 9.53 1.342583e-05
217 NP_194843.1 484 1:P 460 9.07 -2.15 6.92 4.190108e-05
218 NP_172647.1 511 1:P 487 5.88 -1.79 4.09 1.260176e-04
219 NP_565406.1 350 1:P 318 11.33 -0.76 10.57 8.223500e-06



Last modified: 25th October 2002