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GPI Anchor Biosynthesis Report: SMP3_YEAST (SMP3 family, Saccharomyces cerevisiae)



Sequence Analysis
Name From To Source/E Description
TM 5 25 toppred2=1.824  
TM 59 79 toppred2=1.226  
TM 187 207 toppred2=1.667  
LCR 213 230 SEG 12 2.2 2.5  
TM 213 233 toppred2=2.028  
TM 271 291 toppred2=1.395  
TM 295 315 toppred2=1.405  
LCR 319 327 SEG 12 2.2 2.5  
TM 344 364 toppred2=1.760  
Cluster 469 500 SAPS Mixed charge cluster
LCR 488 504 SEG 12 2.2 2.5  


Sequence Information
Protein SMP3_YEAST
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|2507131|gb|Q04174|SMP3_YEAST SMP3 PROTEIN.
    Protein Sequence 
    MMRYQWWLYL VYAIGLMLCL GPSYIHPDEH FQCIEILAMQ FMKVKGTIPW EFKSKFAARS
YGPLLLVYGP LFTILESFPE IQDNPALILY SMRLQNYVMY LLCYHFLIPK LIRDERKAVQ
FMQKSLLLTS YVTWTYQTHT FSNSIETLAL ISTLTVMEDM VNEKNIQRSN FKNSVILGLI
FSFGVFNRVT FPAFIFLPCL ILFWKFYRVH WKSFSLLLLS FSFSSCLFVL IDTNIYNNGK
GFVITPLNNL KYNLNVQNLQ VHGLHPRYTH LLVNLPQIVG PVLLLAIFSG YKLDKLSTYA
IISGLLFLSF FQHQELRFLV PLVPLLVTNL NWTPLSSTLV NKKIFKGTWL LFNIIMAFIM
GISHQAGIIQ FLGDYFHFRT EQMGVHIWWK TYSPPTWMYM SNNLTVSSLI NTQDGIESID
EVAFSVGNHH VIDLKGCDLP LLTETIRRLR LNGSITPLTL VTPNSMTSEL KKLKRDGTIN
LIPKRNYLFH LDLDHLDFND FTTFKPGLTV YSIELL


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003