IMP GPI Biosynthesis Report IMP-Bioinformatics
GPI Biosynthesis Main Page  
GPI Site Motif   GPI Site Prediction   Home Page B.E.  

GPI Anchor Biosynthesis Report: TRYP10.0.001875_6 (PIG-C family, Trypanosoma brucei)



Sequence Analysis
LCR 85 105 SEG 12 2.2 2.5  
TM 1 87 107 toppred2=2.077  
TM 2 112 132 toppred2=2.024  
TM 3 158 178 toppred2=1.658  
TM 4 181 201 toppred2=1.288  
TM 5 211 231 toppred2=0.766 Putative
TM 6 234 254 toppred2=2.055  
TM 7 264 284 toppred2=1.771  
LCR 284 307 SEG 12 2.2 2.5  
TM 8 287 307 toppred2=2.327  


Sequence Information
Protein TRYP10.0.001875_6
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: ftp://ftp.sanger.ac.uk/pub/databases/T.brucei_sequences/CONTIGS/TRYP10/predicted_peptides
    Protein Sequence 
    MRNCQPASLR ETSAMGEAAQ PRGTIGSVST ETATVRDEGR VWRKVLYTRQ PYEDNYVDPQ
QFLQDLRQNV NVATYEYNKV VLDTFVVIQQ FSFVVFYLFV FSMMLSGRVD ECALMWVNAT
LFTLAFVFCI VVQRQQAVDR GEIPTPFTHY LMGLCRQGIP LVGVLILLSP VLQTLTVAYS
NDTIVTLSSL SMFVHVLLTD YNYLNCYSER YQQNTAVNAA TFGIILIASR IQRVFQSGAL
IMFGILCFTL SPIPRHNLKH VSLRAHVVLT FTICALAIYF LMEVPVFALL YCVVVVVISV
VIPFFFVKLH GSMKDQINGP WDEAKPTNSA AAVEWANAGM LQ


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003