Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA86478.1| (AB032990) KIAA1164 protein [Homo sapiens] 642 0.0
dbj|BAA92628.1| (AB037811) KIAA1390 protein [Homo sapiens] 390 e-107
ref|XP_002022.1| hypothetical protein FLJ11280 [Homo sapiens] 349 4e-95
ref|NP_060849.1| hypothetical protein FLJ11280 [Homo sapien... 348 5e-95
gb|AAF60801.1| (AC024826) contains similarity to human KIAA... 180 2e-44
pir||T09345 hypothetical protein T26M18.70 - Arabidopsis th... 132 9e-30
ref|NP_015133.1| Ypl191cp [Saccharomyces cerevisiae] >gi|21... 126 4e-28
emb|CAC04450.1| (AL391572) conserved hypothetical protein [... 103 3e-21
ref|NP_011433.1| Ygl082wp [Saccharomyces cerevisiae] >gi|17... 99 1e-19
pir||T05127 hypothetical protein F7H19.140 - Arabidopsis th... 86 6e-16
sp|Q09874|YAGB_SCHPO HYPOTHETICAL 42.3 KD PROTEIN C12G12.11... 77 3e-13
gb|AAF29509.1|AF199600_1 (AF199600) alternative sigma facto... 33 5.2
pir||B82641 transcription regulator LysR family XF1752 [imp... 32 9.0
>dbj|BAA86478.1| (AB032990) KIAA1164 protein [Homo sapiens]
Length = 390
Score = 642 bits (1637), Expect = 0.0
Identities = 317/390 (81%), Positives = 317/390 (81%)
Query: 1 AASKERFPGQSVYHIKWIQWKEENTPIITQNENGPCPXXXXXXXXXXAWKVKLPPMMEII 60
AASKERFPGQSVYHIKWIQWKEENTPIITQNENGPCP AWKVKLPPMMEII
Sbjct: 1 AASKERFPGQSVYHIKWIQWKEENTPIITQNENGPCPLLAILNVLLLAWKVKLPPMMEII 60
Query: 61 TAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFE 120
TAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFE
Sbjct: 61 TAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFE 120
Query: 121 YTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGF 180
YTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGF
Sbjct: 121 YTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGF 180
Query: 181 VAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLT 240
VAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLT
Sbjct: 181 VAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLT 240
Query: 241 EEKVVWESLHNVDGDGNFCDSEFHLRPPSDPETVYKGQQDQIDQDYLMAXXXXXXXXXXX 300
EEKVVWESLHNVDGDGNFCDSEFHLRPPSDPETVYKGQQDQIDQDYLMA
Sbjct: 241 EEKVVWESLHNVDGDGNFCDSEFHLRPPSDPETVYKGQQDQIDQDYLMALSLQQEQQSQE 300
Query: 301 INWEQIPEGISDLELAKKLQEEEDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
INWEQIPEGISDLELAKKLQEEEDRR
Sbjct: 301 INWEQIPEGISDLELAKKLQEEEDRRASQYYQEQEQAAAAAAAASTQAQGQPAQASPSSG 360
Query: 361 RQSGNSXXXXXXXXXXXXXXXXXXNSCVIL 390
RQSGNS NSCVIL
Sbjct: 361 RQSGNSERKRKEPREKDKEKEKEKNSCVIL 390
>dbj|BAA92628.1| (AB037811) KIAA1390 protein [Homo sapiens]
Length = 505
Score = 390 bits (991), Expect = e-107
Identities = 194/326 (59%), Positives = 235/326 (71%), Gaps = 13/326 (3%)
Query: 4 KERFPGQSVYHIKWIQWKEENTPIITQNENGPCPXXXXXXXXXXAWKVKLPPMMEIITAE 63
+ R P Y +KWI WK E TPIITQ+ NGPCP WKVKLPP E+IT++
Sbjct: 141 RTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSD 200
Query: 64 QLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTP 123
+LM +LG+ +L KP+E SE +LN++QN+ DAM +L KL TGLDVNVRFTGV FEYTP
Sbjct: 201 ELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTP 260
Query: 124 ECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGFVAE 183
EC VFDLL IPLYHGWLVDPQ + V+AVG SYNQLVE+II+CK S ++ LV+EG +AE
Sbjct: 261 ECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAE 320
Query: 184 QFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLTEEK 243
QFL TA QLTYHGLCELT+ +EGEL VFFRNNHFSTMTK+K LYLLVTDQGFL EE+
Sbjct: 321 QFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQ 380
Query: 244 VVWESLHNVDGDGNFCDSEFHLR------PPSDPETVYKGQQDQIDQDYLMAXXXXXXXX 297
VVWESLHNVDGD FCDS+FHL P ++ + +Q Q+DQDYL+A
Sbjct: 381 VVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQ--- 437
Query: 298 XXXINWEQIPEGISDLELAKKLQEEE 323
+ P G++DLELA++LQ+EE
Sbjct: 438 ----QQPRGPLGLTDLELAQQLQQEE 459
>ref|XP_002022.1| hypothetical protein FLJ11280 [Homo sapiens]
Length = 327
Score = 349 bits (885), Expect = 4e-95
Identities = 174/281 (61%), Positives = 212/281 (74%), Gaps = 13/281 (4%)
Query: 49 WKVKLPPMMEIITAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLD 108
WKVKLPP E+IT+++LM +LG+ +L KP+E SE +LN++QN+ DAM +L KL TGLD
Sbjct: 8 WKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLD 67
Query: 109 VNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCK 168
VNVRFTGV FEYTPEC VFDLL IPLYHGWLVDPQ + V+AVG SYNQLVE+II+CK
Sbjct: 68 VNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCK 127
Query: 169 QSDNSELVSEGFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQ 228
S ++ LV+EG +AEQFL TA QLTYHGLCELT+ +EGEL VFFRNNHFSTMTK+K
Sbjct: 128 HSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSH 187
Query: 229 LYLLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFHLR------PPSDPETVYKGQQDQI 282
LYLLVTDQGFL EE+VVWESLHNVDGD FCDS+FHL P ++ + +Q Q+
Sbjct: 188 LYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQV 247
Query: 283 DQDYLMAXXXXXXXXXXXINWEQIPEGISDLELAKKLQEEE 323
DQDYL+A + P G++DLELA++LQ+EE
Sbjct: 248 DQDYLIALSLQQ-------QQPRGPLGLTDLELAQQLQQEE 281
>ref|NP_060849.1| hypothetical protein FLJ11280 [Homo sapiens]
dbj|BAA92104.1| (AK002142) unnamed protein product [Homo sapiens]
Length = 327
Score = 348 bits (884), Expect = 5e-95
Identities = 174/281 (61%), Positives = 212/281 (74%), Gaps = 13/281 (4%)
Query: 49 WKVKLPPMMEIITAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLD 108
WKVKLPP E+IT+++LM +LG+ +L KP+E SE +LN++QN+ DAM +L KL TGLD
Sbjct: 8 WKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLD 67
Query: 109 VNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCK 168
VNVRFTGV FEYTPEC VFDLL IPLYHGWLVDPQ + V+AVG SYNQLVE+II+CK
Sbjct: 68 VNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCK 127
Query: 169 QSDNSELVSEGFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQ 228
S ++ LV+EG +AEQF TA QLTYHGLCELT+ +EGEL VFFRNNHFSTMTK+K
Sbjct: 128 HSSDTNLVTEGLIAEQFPETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSH 187
Query: 229 LYLLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFHLR------PPSDPETVYKGQQDQI 282
LYLLVTDQGFL EE+VVWESLHNVDGD FCDS+FHLR P ++ + +Q Q+
Sbjct: 188 LYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLRHSLGKGPGAEGGSGSPEKQLQV 247
Query: 283 DQDYLMAXXXXXXXXXXXINWEQIPEGISDLELAKKLQEEE 323
DQDYL+A + P G++DLELA++LQ+EE
Sbjct: 248 DQDYLIALSLQQ-------QQPRGPLGLTDLELAQQLQQEE 281
>gb|AAF60801.1| (AC024826) contains similarity to human KIAA1164 protein
[Caenorhabditis elegans]
Length = 379
Score = 180 bits (453), Expect = 2e-44
Identities = 94/249 (37%), Positives = 141/249 (55%), Gaps = 8/249 (3%)
Query: 27 IITQNENGPCPXXXXXXXXXXAWKVKLPPMMEIITAEQLMEYLGDYMLDAKPKEISEIQR 86
I+TQN NGPCP K+ +P ++T+ L+ L + +L P E E +
Sbjct: 67 IVTQNINGPCPLIALINALVLKGKLTIPSSY-VVTSTNLLNLLTNVILARAPPENDEKLK 125
Query: 87 LNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQID 146
+E N+ D M I+ L GLDVNV+F+ V FE+TP +FDL+ + LYH WL DPQ
Sbjct: 126 ETFEANLGDVMNIMETLVNGLDVNVKFSAVDTFEFTPALSLFDLVSVNLYHVWLPDPQFT 185
Query: 147 DIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGFVAEQFLNNTATQLTYHGLCELTSTVQ 206
+ + N +YN+LVEK+ QS +EL+ F + + +Q+T+HGL L ++
Sbjct: 186 VLYDLIRNLNYNELVEKMCG-DQSTETELL------RTFYDESISQITFHGLASLMERMK 238
Query: 207 EGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFHLR 266
+GEL V F NNHFST+ K + +++ LV+D+G E +VWE+ +VDGD F + +F
Sbjct: 239 DGELAVVFHNNHFSTILKRRDEIFKLVSDEGLCDEPNIVWETFSSVDGDCIFVNGDFGNF 298
Query: 267 PPSDPETVY 275
P P T +
Sbjct: 299 KPITPPTTH 307
>pir||T09345 hypothetical protein T26M18.70 - Arabidopsis thaliana
emb|CAB44324.1| (AL078606) putative protein [Arabidopsis thaliana]
emb|CAB78229.1| (AL161532) putative protein [Arabidopsis thaliana]
Length = 626
Score = 132 bits (328), Expect = 9e-30
Identities = 65/157 (41%), Positives = 99/157 (62%), Gaps = 2/157 (1%)
Query: 12 VYHIKWIQWKEENTPIITQNENGPCPXXXXXXXXXXAWKVKLPPMMEIITAEQLMEYLGD 71
+Y K IQ+ TPII QNENGPCP + L P ++ E+LM + D
Sbjct: 37 LYKTKSIQFLGRTTPIILQNENGPCPLLAICNVLLLRNNLNLNPDCYEVSQERLMSLVVD 96
Query: 72 YMLDAKPKEISEIQRL--NYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTPECIVFD 129
++D+ K ++ + N +QN++DA+ +L +L TG+DVN++F + FE+TPEC +FD
Sbjct: 97 RLIDSNSKVNNKDEGYIENQQQNIADAIDLLPRLTTGIDVNIKFRRIDDFEFTPECAIFD 156
Query: 130 LLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIIS 166
LLDIPLYHGW+VDPQ + A+G+ SYN L+ ++++
Sbjct: 157 LLDIPLYHGWIVDPQDVEAANAIGSKSYNALMGELVA 193
Score = 32.8 bits (73), Expect = 6.9
Identities = 13/29 (44%), Positives = 19/29 (64%)
Query: 235 DQGFLTEEKVVWESLHNVDGDGNFCDSEF 263
DQG+L + +VWE L+ V+GD F + F
Sbjct: 484 DQGYLNQPDLVWEKLNEVNGDTAFMTATF 512
>ref|NP_015133.1| Ypl191cp [Saccharomyces cerevisiae]
pir||S65210 hypothetical protein YPL191c - yeast (Saccharomyces cerevisiae)
emb|CAA97904.1| (Z73547) ORF YPL191c [Saccharomyces cerevisiae]
Length = 360
Score = 126 bits (314), Expect = 4e-28
Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 46/330 (13%)
Query: 16 KWIQWKEENTPIITQNENGPCPXXXXXXXXXXAWK--------VKLPPMMEIITAEQLME 67
K ++ +N I+ QNENGPC + ++L I+ ++L+E
Sbjct: 8 KSVKINGQNHRILLQNENGPCALLALANILILSPDHTRFSNELIRLVNKGSQISLKELIE 67
Query: 68 YLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTPECIV 127
L D L K ++I S+ +++L +L GL++N F G FE T E +
Sbjct: 68 VLADIALQVTDKPSTDI---------SELLSLLPRLHEGLNINPEFNGS--FENTKEMSI 116
Query: 128 FDLLDIPLYHGWLVDPQIDD-IVKAVGNCSYNQLVEKI-----ISC--KQSDNS-ELVSE 178
F L ++ + HGW+++ I++ I + + + SY + I+C Q +NS E++ +
Sbjct: 117 FRLFNVDVVHGWVINSFINENIDEKLSHYSYESAQRILTQAADINCGISQDENSDEVLRD 176
Query: 179 GFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGF 238
FLN + TQLT GL L + + + FRN+HFST+ KY+ +LY LVTD G+
Sbjct: 177 AMHLGLFLNESPTQLTAFGLLRLREKLLHNKFSILFRNDHFSTLFKYEDRLYTLVTDFGY 236
Query: 239 LTEEKVVWESLHNVDGDGNFCDSEFHLRPPSDPETVYKGQQ--DQIDQDYLMAXXXXXXX 296
+ +VW+SL +VDG CD+ F + GQQ I++D+
Sbjct: 237 KNCKDIVWQSLDSVDGS---CDAFF---AGNFSAAEVNGQQLSTDIERDF---------- 280
Query: 297 XXXXINWEQIPEGISDLELAKKLQEEEDRR 326
+ E+I + +D ELAK+LQE+E R
Sbjct: 281 GTGNLLLEEIQQIENDKELAKQLQEQEQER 310
>emb|CAC04450.1| (AL391572) conserved hypothetical protein [Neurospora crassa]
Length = 1051
Score = 103 bits (255), Expect = 3e-21
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 54/296 (18%)
Query: 13 YHIKWIQWKE-------ENTPIITQNENGPCPXXXXXXXXXXAWKVKLPPMMEIITAEQL 65
Y IK I W + +PI+ QN NGPCP + + + T
Sbjct: 401 YQIKRINWYDTTAEINPRTSPILIQNANGPCPLLALVNALILSTPAHQDNTVLVETLRSR 460
Query: 66 MEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAI---LHKLQTGLDVNVRFTGVR----- 117
+ ++DA E+ +RL + + D + L L TG++VN RF +
Sbjct: 461 EQISLGLLIDAVFDELMSERRLGEDAVLPDVTELYNFLQSLHTGMNVNPRFVPTKQMEDA 520
Query: 118 --------------------VFEYTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGN--C 155
FE T E ++ +PL HGWL P+ D + A
Sbjct: 521 FNRTSLTNLPPMERGGQIPGTFESTREMRLYSTFSVPLIHGWL-PPRSDPVYGAFERQAA 579
Query: 156 SYN----------QLVEKIISCKQS----DNSELVSEGFVAEQFLNNTATQLTYHGLCEL 201
SY+ +L K+ S + D +++ + F + F +ATQLT GL +
Sbjct: 580 SYDDAQNLLFREEELEAKLSSRDEQGLTEDEQQMLQDIFAIKDFWKISATQLTTWGLDVI 639
Query: 202 TSTVQEGELCVFFRNNHFSTMTKY--KGQLYLLVTDQGFLTEEKVVWESLHNVDGD 255
S+++ + + FRN+HF+T+ K+ G+L LVTD G+ T +++VWESL +V+G+
Sbjct: 640 RSSMKPASVAILFRNDHFATLYKHPQNGKLMTLVTDAGYATHDEIVWESLVDVNGE 695
>ref|NP_011433.1| Ygl082wp [Saccharomyces cerevisiae]
sp|P53155|YGI2_YEAST HYPOTHETICAL 43.3 KD PROTEIN IN SCY1-DBP3 INTERGENIC REGION
pir||S64089 probable membrane protein YGL082w - yeast (Saccharomyces
cerevisiae)
emb|CAA96787.1| (Z72604) ORF YGL082w [Saccharomyces cerevisiae]
Length = 381
Score = 98.7 bits (242), Expect = 1e-19
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 44/291 (15%)
Query: 58 EIITAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVR 117
E +T +L++ L D + + Q+L + IL +L +GL++N F G
Sbjct: 58 ETVTLNELVQTLADMGVQNPNGTDVDKQQL---------LQILPQLYSGLNINPEFNGS- 107
Query: 118 VFEYTPECIVFDLLDIPLYHGWLVDPQID-DIVKAVGNCSYNQLVEKIISC-------KQ 169
FE E +F L ++ + HGW++D D + + V SY + ++ Q
Sbjct: 108 -FEDGVEMSIFRLYNVGIVHGWIIDGDNDPNSYEHVSKYSYMGAQKVLVQSYEIQKNNAQ 166
Query: 170 SDNSELV-SEGFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQ 228
+NSE + S+ + FL +ATQLT +GL L + E V FRN+HF T+ K G+
Sbjct: 167 FENSEQIQSDAPYLKSFLARSATQLTEYGLTHLREILVERSYAVLFRNDHFCTLYKNNGE 226
Query: 229 LYLLVTDQGFLTEEKVVWESLHNVDGD------GNFCDSEFHLRPPSDPETVYKGQQDQI 282
L+ LVTD + + + W+SL +V+G GNF + ET GQ
Sbjct: 227 LFTLVTDPTYRNRKDINWQSLKSVNGSQDSYYTGNFIPTSL-----ERTETTATGQ---- 277
Query: 283 DQDYLMAXXXXXXXXXXXINWEQIPEGIS-------DLELAKKLQEEEDRR 326
++ Y+ N Q+ G S D ELA++LQE+ED R
Sbjct: 278 NESYISNPFSDQNTGHVTSN--QVNSGASGVQQIEDDEELARRLQEQEDMR 326
>pir||T05127 hypothetical protein F7H19.140 - Arabidopsis thaliana
emb|CAA19811.1| (AL031018) putative protein [Arabidopsis thaliana]
emb|CAB79251.1| (AL161558) putative protein [Arabidopsis thaliana]
Length = 487
Score = 86.2 bits (210), Expect = 6e-16
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 178 EGFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQG 237
EG + + F + TQLT+HGL L ++E ELCV FRNNHF+TM +++ +LY LVT +G
Sbjct: 374 EGELIKGFFEESVTQLTWHGLFTLEDDLKEWELCVLFRNNHFATMLQHEERLYTLVTYEG 433
Query: 238 FLTEEKVVWESLHNVDGDGNFCDSEFHLRPPSDPETVYKGQQDQIDQ 284
+ ++ +VWE + +DGD F F + ++K QQ I +
Sbjct: 434 YQMQQDLVWERFNKIDGDSAFFTGYF-------TKFIFKDQQHAISK 473
Score = 68.3 bits (164), Expect = 1e-10
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 8 PGQSVYHIKWIQWKEENTPIITQNENGPCPXXXXXXXXXXAWKVKLPPMMEIITAEQLME 67
P + Y K I ++ + II Q++NGPCP + L ++ E L+
Sbjct: 10 PDEIFYKTKKILYRGQRCNIILQDKNGPCPLIAICNVLILKHGINLDTYNSQVSEEDLVN 69
Query: 68 YLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRF--------TG---- 115
+ D +LD + I + ++ KL G++V+++F TG
Sbjct: 70 LVID-VLDDTDEYID--------------IGLIRKLACGINVDLKFERKYLIVMTGNVLL 114
Query: 116 ---VRVFEYTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQL 160
+ FE TPE +F L IPLYHGWLVDP +IV A+G S ++L
Sbjct: 115 ACRITDFELTPELDIFRSLKIPLYHGWLVDPTDVEIVAAIGGRSRDEL 162
>sp|Q09874|YAGB_SCHPO HYPOTHETICAL 42.3 KD PROTEIN C12G12.11C IN CHROMOSOME I
pir||S62542 hypothetical coiled-coil protein SPAC12G12.11c - fission yeast
(Schizosaccharomyces pombe)
pir||T37590 hypothetical coiled-coil protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAA91506.1| (Z66568) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
Length = 365
Score = 77.3 bits (187), Expect = 3e-13
Identities = 78/264 (29%), Positives = 114/264 (42%), Gaps = 43/264 (16%)
Query: 27 IITQNENGPCPXXXXXXXXXXAWKVKLP---PMMEIITAEQLMEYLGDYMLDAKPKEISE 83
I+ Q NGPCP V P P IT ++L EYL ++ AK + +
Sbjct: 50 ILCQTVNGPCPIIALSNALILKSNVDRPFELPKKRYITPDELTEYLVEF---AKAYGLCK 106
Query: 84 IQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDP 143
Q Q++ D + +H G +N + FEY E +F + L HGW++
Sbjct: 107 NQ-----QSLQDKLTSMH---FGQQLNPCLYDIEKFEYGHE--IFCTFGVRLVHGWILS- 155
Query: 144 QIDDIVKAVGNCSYNQLVE---KIISCKQSDNSELVSEGFVAEQ---FLNN--------- 188
DD+ + + SY + +E K+ S L + + EQ FLNN
Sbjct: 156 --DDMGLSDEDLSYLRKLEYYEKVADTFAERRSLLEMQEPLTEQQQDFLNNSTCVDKVME 213
Query: 189 ---TATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQL--YLLVTDQGFL-TEE 242
T LT GL ++ V GE+ V FR++HFSTM + LVTD G+ T E
Sbjct: 214 NRYTMQFLTNAGLKKILELVGPGEIVVVFRSSHFSTMYSNPDSFAQFTLVTDSGYARTGE 273
Query: 243 KVVWESLHN---VDGDGNFCDSEF 263
VVWE+ + G+G C + F
Sbjct: 274 DVVWETFDSQTVETGNGELCAANF 297
>gb|AAF29509.1|AF199600_1 (AF199600) alternative sigma factor RpoN [Pseudomonas syringae pv.
maculicola]
Length = 497
Score = 33.2 bits (74), Expect = 5.2
Identities = 27/121 (22%), Positives = 56/121 (45%), Gaps = 11/121 (9%)
Query: 49 WKVKLPPMMEI--ITAEQLMEYLGDY-MLDAKPKEISEIQRLNYEQNMSDAMAILHKLQT 105
W++ + PM + + A L++ + + LD +EI E + + + A+LH++Q
Sbjct: 145 WQLNVAPMSDKDRLVAVTLIDCINNQGYLDETLEEILESFDPELDVELDEIEAVLHRIQQ 204
Query: 106 GLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQ--IDDIVKAVGNCSYNQLVEK 163
+ G R EC++ L +P WL + Q + + + +G+ Y QL+ +
Sbjct: 205 FEPAGI---GARNLS---ECLLLQLRQLPARTPWLAEAQRLVTEYIDLLGSRDYAQLMRR 258
Query: 164 I 164
+
Sbjct: 259 M 259
>pir||B82641 transcription regulator LysR family XF1752 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF84561.1|AE003998_3 (AE003998) transcriptional regulator (LysR family) [Xylella
fastidiosa]
Length = 324
Score = 32.5 bits (72), Expect = 9.0
Identities = 18/73 (24%), Positives = 31/73 (41%), Gaps = 2/73 (2%)
Query: 54 PPMMEIITAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRF 113
PP+ I A EY + + KP ++ +N S + + ++ G +NVR
Sbjct: 162 PPLRMAIAASP--EYFASHPVPKKPHDLLNHNCINMRMQTSGGIYVWDFMRRGKQLNVRV 219
Query: 114 TGVRVFEYTPECI 126
G +F TP +
Sbjct: 220 DGQLIFNTTPNMV 232
Database: nr
Number of letters in database: 191,393,013
Number of sequences in database: 605,060
Lambda K H
0.317 0.136 0.409
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127910824
Number of Sequences: 605060
Number of extensions: 4943105
Number of successful extensions: 8795
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8760
Number of HSP's gapped (non-prelim): 16
length of query: 390
length of database: 191,393,013
effective HSP length: 55
effective length of query: 335
effective length of database: 158,114,713
effective search space: 52968428855
effective search space used: 52968428855
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 72 (32.5 bits)
