Score E
Sequences producing significant alignments: (bits) Value
ref|NP_060623.1| hypothetical protein FLJ10601 [Homo sapien... 380 e-104
dbj|BAB15128.1| (AK025429) unnamed protein product [Homo sa... 346 3e-94
gb|AAF21241.1|AF021334_1 (AF021334) alpha D integrin [Rattu... 57 6e-07
gb|AAB38547.1| (U37028) leukointegrin alpha d chain [Homo s... 56 1e-06
pir||A48569 antigen Em100 - Eimeria maxima >gi|158891|gb|AA... 53 1e-05
gb|AAF01565.1|AF061273_1 (AF061273) thrombospondin-related ... 49 2e-04
pir||A45638 immunodominant microneme protein Etp100 - Eimer... 49 2e-04
sp|P13944|CA1C_CHICK COLLAGEN ALPHA 1(XII) CHAIN PRECURSOR ... 48 4e-04
sp|Q91145|CA1C_NOTVI COLLAGEN ALPHA 1(XII) CHAIN >gi|211917... 43 0.013
ref|NP_031764.1| procollagen, type VII, alpha 1 [Mus muscul... 42 0.017
dbj|BAA96034.1| (AB040943) KIAA1510 protein [Homo sapiens] 41 0.038
ref|XP_003244.1| collagen, type VII, alpha 1 (epidermolysis... 40 0.085
ref|NP_058042.1| matrilin 2 [Mus musculus] >gi|7387906|sp|O... 40 0.085
ref|NP_000085.1| collagen, type VII, alpha 1 (epidermolysis... 40 0.085
pir||A54849 collagen alpha 1(VII) chain precursor - human 40 0.085
gb|AAA58965.1| (L23982) collagen type VII [Homo sapiens] 40 0.085
ref|NP_002371.1| matrilin 2; Human matrilin-2 precursor mRN... 39 0.11
gb|AAC72024.1| (AF042093) alpha-1 type VII collagen non-col... 39 0.11
pir||T28797 hypothetical protein C16E9.1 - Caenorhabditis e... 38 0.25
pir||B83262 hypothetical protein PA3073 [imported] - Pseudo... 38 0.43
ref|NP_002370.1| matrilin 1, cartilage matrix protein; cart... 38 0.43
pir||S31211 collagen alpha 1(XIV) chain precursor - chicken 36 0.96
pir||S31212 collagen alpha 1(XIV) chain precursor, short fo... 36 0.96
sp|P32018|CA1E_CHICK COLLAGEN ALPHA 1(XIV) CHAIN PRECURSOR ... 36 0.96
gb|AAA48695.1| (M14792) cartilage matrix protein [Gallus ga... 36 0.96
gb|AAA63904.1| (M55683) cartilage matrix protein [Homo sapi... 36 0.96
sp|P05099|CAMA_CHICK CARTILAGE MATRIX PROTEIN PRECURSOR (MA... 36 0.96
emb|CAB45562.1| (AJ238798) CTRP protein [Plasmodium berghei... 36 1.3
pir||T23087 hypothetical protein H13N06.2 - Caenorhabditis ... 36 1.6
emb|CAA06890.1| (AJ006140) matrilin-4 precursor, alternate ... 36 1.6
ref|NP_038620.1| matrilin 4 [Mus musculus] >gi|3766288|emb|... 36 1.6
gb|AAA29778.1| (M96815) thrombospondin related anonymous pr... 36 1.6
ref|XP_007582.1| integrin, alpha 11 [Homo sapiens] 35 2.2
gb|AAF01258.1|AF109681_1 (AF109681) integrin alpha-11 subun... 35 2.2
ref|NP_036343.1| integrin, alpha 11 [Homo sapiens] >gi|5915... 35 2.2
ref|NP_034899.1| matrilin 1, cartilage matrix protein 1 [Mu... 35 2.2
gb|AAG28466.1|AF195494_1 (AF195494) Misexpression suppresso... 34 3.7
gb|AAF57837.1| (AE003802) CG4903 gene product [Drosophila m... 34 3.7
emb|CAB75310.1| (AL139164) putative lipoprotein [Streptomyc... 34 3.7
emb|CAC18105.1| (AL021578) dJ453C12.1.2 (matrilin 4) [Homo ... 34 4.9
emb|CAC18104.1| (AL021578) dJ453C12.1.1 (matrilin 4) [Homo ... 34 4.9
ref|XP_009528.1| matrilin 4 [Homo sapiens] 34 4.9
ref|NP_003824.1| matrilin 4 [Homo sapiens] >gi|3927992|emb|... 34 4.9
gb|AAC47461.1| (U64899) thrombospondin-related anonymous pr... 34 6.4
sp|P15989|CA36_CHICK COLLAGEN ALPHA 3(VI) CHAIN PRECURSOR >... 34 6.4
gb|AAA29776.1| (M96813) thrombospondin related anonymous pr... 34 6.4
gb|AAA29774.1| (M96809) thrombospondin related anonymous pr... 34 6.4
gb|AAG12328.1|AF249739_1 (AF249739) sporozoite surface prot... 33 8.3
pir||T21538 hypothetical protein F29C12.3 - Caenorhabditis ... 33 8.3
sp|Q09370|YS41_CAEEL HYPOTHETICAL 52.5 KD PROTEIN ZK177.1 I... 33 8.3
>ref|NP_060623.1| hypothetical protein FLJ10601 [Homo sapiens]
dbj|BAA91707.1| (AK001463) unnamed protein product [Homo sapiens]
Length = 218
Score = 380 bits (966), Expect = e-104
Identities = 188/190 (98%), Positives = 190/190 (99%)
Query: 114 MSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGY 173
MSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGY
Sbjct: 1 MSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGY 60
Query: 174 RTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKDHVF 233
RTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKDHVF
Sbjct: 61 RTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKDHVF 120
Query: 234 PVNDGFQALQGIIHSILKKSCIEILAAEPSTICAGESFQVVVRGNGFRHARNVDRVLCSF 293
PVNDGFQALQGIIHSILKKSCIEILAAEPSTICAGESFQVVVRGNGFRHARNVDRVLCSF
Sbjct: 121 PVNDGFQALQGIIHSILKKSCIEILAAEPSTICAGESFQVVVRGNGFRHARNVDRVLCSF 180
Query: 294 KINDSVTLNE 303
KINDSVTL++
Sbjct: 181 KINDSVTLSK 190
>dbj|BAB15128.1| (AK025429) unnamed protein product [Homo sapiens]
Length = 274
Score = 346 bits (879), Expect = 3e-94
Identities = 168/213 (78%), Positives = 168/213 (78%)
Query: 325 MKAALQVSMNDGLSFXXXXXXXXXXHCSDGSXXXXXXXXXXXXXXXXXXXXXXPLCCTVI 384
MKAALQVSMNDGLSF HCSDGS PLCCTVI
Sbjct: 1 MKAALQVSMNDGLSFISSSVIITTTHCSDGSILAIALLILFLLLALALLWWFWPLCCTVI 60
Query: 385 IKXXXXXXXXXXXXXDDDGLPKKKWPTVDASYYGGRGVGGIKRMEVRWGEKGSTEEGAKL 444
IK DDDGLPKKKWPTVDASYYGGRGVGGIKRMEVRWGEKGSTEEGAKL
Sbjct: 61 IKEVPPPPAEESEEEDDDGLPKKKWPTVDASYYGGRGVGGIKRMEVRWGEKGSTEEGAKL 120
Query: 445 EKAKNARVKMPEQEYEFPEPRNLNNNMRRPSSPRKWYSPIKGKLDALWVLLRKGYDRVSV 504
EKAKNARVKMPEQEYEFPEPRNLNNNMRRPSSPRKWYSPIKGKLDALWVLLRKGYDRVSV
Sbjct: 121 EKAKNARVKMPEQEYEFPEPRNLNNNMRRPSSPRKWYSPIKGKLDALWVLLRKGYDRVSV 180
Query: 505 MRPQPGDTGRCINFTRVKNNQPAKYPLNNAYHT 537
MRPQPGDTGRCINFTRVKNNQPAKYPLNNAYHT
Sbjct: 181 MRPQPGDTGRCINFTRVKNNQPAKYPLNNAYHT 213
>gb|AAF21241.1|AF021334_1 (AF021334) alpha D integrin [Rattus norvegicus]
Length = 1161
Score = 57.0 bits (135), Expect = 6e-07
Identities = 59/224 (26%), Positives = 97/224 (42%), Gaps = 25/224 (11%)
Query: 78 DLYFILDKSGSVLHH-WNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTE----- 131
D+ F++D SGS+ + ++ FV+ L +F S S + +S T TE
Sbjct: 152 DIAFLIDGSGSINQRDFAQMKDFVKALMGEFASTSTLFSLMQYSNILKTHFTFTEFKNIL 211
Query: 132 DREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTAS-VIIALTDGELHED 190
D + + + +LQ G TY G E++++ ++A +++ +TDG+ + D
Sbjct: 212 DPQSLVDPIVQLQ-----GLTYTATGIRTVMEELFHSKNGSRKSAKKILLVITDGQKYRD 266
Query: 191 LFFYSEREANRSRDLGAIVYCVGVKD-------FNETQLARIADSKDHVFPVNDGFQALQ 243
YS+ + G I Y +GV D E A +DHVF V + F AL+
Sbjct: 267 PLEYSD-VIPAADKAGIIRYAIGVGDAFQEPTALKELNTIGSAPPQDHVFKVGN-FAALR 324
Query: 244 GIIHSILKKSCIEILAAEPSTICAGESFQVVVRGNGFRHARNVD 287
I + +K I A E + + SFQ + GF A D
Sbjct: 325 SIQRQLQEK----IFAIEGTQSRSSSSFQHEMSQEGFSSALTSD 364
>gb|AAB38547.1| (U37028) leukointegrin alpha d chain [Homo sapiens]
Length = 1162
Score = 56.2 bits (133), Expect = 1e-06
Identities = 62/234 (26%), Positives = 103/234 (43%), Gaps = 24/234 (10%)
Query: 68 DGGPAC-YGGFDLYFILDKSGSV-LHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTT 125
D P C + D+ F++D SGS+ + +N++ FV+ + +F + + +S
Sbjct: 139 DATPECPHQEMDIVFLIDGSGSIDQNDFNQMKGFVQAVMGQFEGTDTLFALMQYSN---- 194
Query: 126 LMKLTEDREQIRQGLEELQKVLP----GGDTYMHEGFERASEQIYYENRQGYRTAS-VII 180
L+K+ Q R + V P G T+ G Q+++ ++A ++I
Sbjct: 195 LLKIHFTFTQFRTSPSQQSLVDPIVQLKGLTFTATGILTVVTQLFHHKNGARKSAKKILI 254
Query: 181 ALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLAR-------IADSKDHVF 233
+TDG+ ++D YS+ ++ G I Y +GV + AR A +DHVF
Sbjct: 255 VITDGQKYKDPLEYSD-VIPQAEKAGIIRYAIGVGHAFQGPTARQELNTISSAPPQDHVF 313
Query: 234 PVNDGFQALQGIIHSILKKSCIEILAAEPSTICAGESFQVVVRGNGFRHARNVD 287
V D F AL I + +K I A E + A SFQ + GF A +D
Sbjct: 314 KV-DNFAALGSIQKQLQEK----IYAVEGTQSRASSSFQHEMSQEGFSTALTMD 362
>pir||A48569 antigen Em100 - Eimeria maxima
gb|AAA29076.1| (M99058) em100 gene is homologous the Eimeria tenella gene et100
(accession number M73495) encoding the microneme protein
Etp100 [Eimeria maxima]
Length = 724
Score = 52.7 bits (124), Expect = 1e-05
Identities = 60/234 (25%), Positives = 99/234 (41%), Gaps = 21/234 (8%)
Query: 43 PRHRL-PVALTATLVLICAG------QGGRREDGGPACYGGFDLYFILDKSGSV-LHHWN 94
P RL P + LV + AG + C D+ ++D+SGS+ ++
Sbjct: 5 PTQRLAPGWALSLLVFLAAGLTFHSSHAAASSEADQVCTRLLDVMLVVDESGSIGTSNYG 64
Query: 95 EIYYFVEQLAHKF-ISPQ-LRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLP--GG 150
++ F+ A +SP +R+ + F T T L++ R Q L K LP G
Sbjct: 65 KVRSFISNFAGTMPLSPDDVRVGLVTFGTSAVTRWDLSDSRAQNADLLAAAAKKLPYAAG 124
Query: 151 DTYMHEGFERASEQIYYENRQGYRTA-SVIIALTDGELHEDLFFYSEREANRSRDLGAIV 209
TY H G +A E ++ + G A +I+ +TDG S E R+R G I+
Sbjct: 125 STYTHLGLAKAEEILFSFQKGGRDNAPKMILVMTDGASSRRSQTLSAAEKLRNR--GVII 182
Query: 210 YCVGV-KDFNETQLARIA--DSKDHV---FPVNDGFQALQGIIHSILKKSCIEI 257
+GV N + IA D+ D V + + + I+ I+K +C ++
Sbjct: 183 VVLGVGTGVNSAECRSIAGCDTSDTVECPRYLQSNWGGVSSQINGIIKAACKDL 236
>gb|AAF01565.1|AF061273_1 (AF061273) thrombospondin-related adhesive protein homolog
[Neospora caninum]
Length = 765
Score = 48.8 bits (114), Expect = 2e-04
Identities = 39/152 (25%), Positives = 69/152 (44%), Gaps = 16/152 (10%)
Query: 73 CYGGFDLYFILDKSGSVLH-HWNEIYYFVEQLAHKFISP------QLRMSFIVFSTRGTT 125
C D+ F++D SGS+ H+ E V+Q H F+S ++ S ++FST
Sbjct: 72 CTSQLDICFLVDSSGSIGEAHYEE----VKQFLHAFLSKLPIGNDEVNTSLVIFSTTVHP 127
Query: 126 LMKLTEDREQIRQGLEELQKVLP--GGDTYMHEGFERASEQIY-YENRQGYRTASVIIAL 182
L + ++ + +P GG T G + ++ ++ Y + ++IA+
Sbjct: 128 HWSLRANNASDKETAMQDVLTIPYHGGTTNTAAGLQTCNQMLFDYPREERQTVPKLVIAM 187
Query: 183 TDGELHEDLFFYSEREANRSRDLGAIVYCVGV 214
TDGE D F++ EA R+ G I+ + V
Sbjct: 188 TDGESDSD--FHTVNEAKVIRERGGIITVLSV 217
>pir||A45638 immunodominant microneme protein Etp100 - Eimeria tenella
gb|AAD03350.1| (AF032905) microneme protein precursor Etmic-1 [Eimeria tenella]
Length = 712
Score = 48.8 bits (114), Expect = 2e-04
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 23/238 (9%)
Query: 40 AESPRHRLP--------VALTATLVLICAGQGGRREDGGP--ACYGGFDLYFILDKSGSV 89
A PR RL V L A + Q G G C D+ ++D+SGS+
Sbjct: 2 APLPRRRLAPCRALSLLVGLLAASFAFSSLQPGATTSSGQDQVCTSLLDVMLVVDESGSI 61
Query: 90 -LHHWNEIYYFVEQLAHKF-ISPQ-LRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKV 146
++ ++ F+E + ISP+ +R+ I F+TR L++ + +
Sbjct: 62 GTSNFRKVRQFIEDFVNSMPISPEDVRVGLITFATRSKVRWNLSDPKATNPSLAISAARS 121
Query: 147 LP--GGDTYMHEGFERASEQIYYENRQGYRT--ASVIIALTDGELHEDLFFYSEREANRS 202
L G TY H G + A +++ Y+ G R +++ +TDG +L + A
Sbjct: 122 LSYSTGVTYTHYGLQDA-KKLLYDTNAGARNNVPKLVLVMTDGA--SNLPSQTRSSAAAL 178
Query: 203 RDLGAIVYCVGV-KDFNETQLARIADSKDHVFP--VNDGFQALQGIIHSILKKSCIEI 257
RD GAIV +GV N ++ IA P + + + ++ I+K +C ++
Sbjct: 179 RDAGAIVVVLGVGSGVNSSECRSIAGCSTSNCPRYLQSNWSNVTQQVNGIIKAACKDL 236
>sp|P13944|CA1C_CHICK COLLAGEN ALPHA 1(XII) CHAIN PRECURSOR (FIBROCHIMERIN)
pir||A40020 collagen alpha 1(XII) chain precursor - chicken
dbj|BAA00701.1| (D00824) alpha 1 chain of type XII collagen [Gallus gallus]
emb|CAA43358.1| (X61024) collagen type XII alpha 1 chain [Gallus gallus]
Length = 3124
Score = 47.6 bits (111), Expect = 4e-04
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 34/248 (13%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYFVEQLAHKF-ISPQ-LRMSFIVFSTRGTTLMKLTEDRE 134
D+ F++D S S+ + ++ ++ F+E L F ISP+ +++S + +S M+ + +R
Sbjct: 439 DVVFLVDGSYSIGIANFVKVRAFLEVLVKSFEISPRKVQISLVQYSR--DPHMEFSLNRY 496
Query: 135 QIRQGLEELQKVLP--GGDTYMHEGFERASEQIYYENRQGY-RTASVIIALTDGELHEDL 191
+ + + P GG T + E+++ ++ V+I +TDG+ D
Sbjct: 497 NRVKDIIQAINTFPYRGGSTNTGKAMTYVREKVFVTSKGSRPNVPRVMILITDGK-SSDA 555
Query: 192 FFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIHSI 249
F + A + RD ++ VGVKD T+L IA ++ HV+ V D F A Q I +
Sbjct: 556 F---KEPAIKLRDADVEIFAVGVKDAVRTELEAIASPPAETHVYTVED-FDAFQRISFEL 611
Query: 250 LKKSCIEILAAEPSTICAGESFQVVVRGNGFRHARNV---DRVLCSFKINDSVTLNEKPF 306
+ C+ I E +R + A+N+ D SFK++ S +E
Sbjct: 612 TQSVCLRI-----------EQELAAIRKKSYVPAKNMVFSDVTSDSFKVSWSAAGSE--- 657
Query: 307 SVEDTYLL 314
E +YL+
Sbjct: 658 --EKSYLI 663
>sp|Q91145|CA1C_NOTVI COLLAGEN ALPHA 1(XII) CHAIN
pir||I51027 type XII collagen alpha-1 chain - eastern newt (fragment)
gb|AAA80217.1| (U19494) type XII collagen alpha-1 chain [Notophthalmus
viridescens]
Length = 929
Score = 42.6 bits (98), Expect = 0.013
Identities = 25/82 (30%), Positives = 42/82 (50%), Gaps = 5/82 (6%)
Query: 174 RTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKDHVF 233
+ + I LTDG+ +D+ S+R A D G +Y VG+K+ +E +L IA D ++
Sbjct: 733 KARKIAILLTDGKSQDDIVAPSKRYA----DEGIELYAVGIKNADENELKEIASDPDELY 788
Query: 234 PVN-DGFQALQGIIHSILKKSC 254
N F L I++ + + C
Sbjct: 789 MYNVADFSLLTNIVNDLTENVC 810
>ref|NP_031764.1| procollagen, type VII, alpha 1 [Mus musculus]
gb|AAB66593.1| (U32107) type VII collagen [Mus musculus]
Length = 2944
Score = 42.2 bits (97), Expect = 0.017
Identities = 48/187 (25%), Positives = 85/187 (44%), Gaps = 18/187 (9%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYFVEQLAHKFISPQ----LRMSFIVFSTRGTT---LMKL 129
D+ F+LD S S+ ++ E+ F+E L F +R + + +S T L L
Sbjct: 39 DIVFLLDGSSSIGRSNFREVRGFLEGLVLPFSGAASAQGVRFATVQYSDDPQTEFGLDTL 98
Query: 130 TEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHE 189
+ IR + EL GG+T S++++ V I +TDG+ +
Sbjct: 99 GSGSDTIR-AIRELS--YKGGNTRTGAALHHVSDRVFLPRLTRPGVPKVCILITDGK-SQ 154
Query: 190 DLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIH 247
DL + A + + G ++ VG+K+ + +L R+A + D F VND F L+ ++
Sbjct: 155 DLV---DTAAQKLKGQGVKLFAVGIKNADPEELKRVASQPTSDFFFFVND-FSILRTLLP 210
Query: 248 SILKKSC 254
I ++ C
Sbjct: 211 LISRRVC 217
>dbj|BAA96034.1| (AB040943) KIAA1510 protein [Homo sapiens]
Length = 1140
Score = 41.0 bits (94), Expect = 0.038
Identities = 42/156 (26%), Positives = 74/156 (46%), Gaps = 14/156 (8%)
Query: 78 DLYFILDKSGSVLH-HWNEIYYFVEQLAHKF-ISP-QLRMSFIVFSTRGTTLMKLTE--D 132
D+ F++D S S+ H H+ ++ F+ + F I P ++++ +S T L
Sbjct: 29 DMVFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWDLNSLST 88
Query: 133 REQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYR--TASVIIALTDGELHED 190
+EQ+ + L+ GG+T+ Q + G R A V+I +TDG+ +D
Sbjct: 89 KEQVLAAVRRLR--YKGGNTFTGLALTHVLGQ-NLQPAAGLRPEAAKVVILVTDGKSQDD 145
Query: 191 LFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIA 226
+ A +DLG V+ VGVK+ +E +L +A
Sbjct: 146 V----HTAARVLKDLGVNVFAVGVKNADEAELRLLA 177
>ref|XP_003244.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
dominant and recessive) [Homo sapiens]
Length = 2582
Score = 39.9 bits (91), Expect = 0.085
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYFVEQLAHKFISPQ----LRMSFIVFSTRGTT---LMKL 129
D+ F+LD S S+ ++ E+ F+E L F +R + + +S T L L
Sbjct: 38 DIVFLLDGSSSIGRSNFREVRSFLEGLVLPFSGAASAQGVRFATVQYSDDPRTEFGLDAL 97
Query: 130 TEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHE 189
+ IR + EL GG+T ++ ++ V I +TDG+ +
Sbjct: 98 GSGGDVIR-AIRELS--YKGGNTRTGAAILHVADHVFLPQLARPGVPKVCILITDGK-SQ 153
Query: 190 DLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIH 247
DL + A R + G ++ VG+K+ + +L R+A + D F VND F L+ ++
Sbjct: 154 DLV---DTAAQRLKGQGVKLFAVGIKNADPEELKRVASQPTSDFFFFVND-FSILRTLLP 209
Query: 248 SILKKSC 254
+ ++ C
Sbjct: 210 LVSRRVC 216
>ref|NP_058042.1| matrilin 2 [Mus musculus]
sp|O08746|MTN2_MOUSE MATRILIN-2 PRECURSOR
gb|AAC53163.1| (U69262) matrilin-2 precursor [Mus musculus]
Length = 956
Score = 39.9 bits (91), Expect = 0.085
Identities = 47/193 (24%), Positives = 85/193 (43%), Gaps = 15/193 (7%)
Query: 75 GGFDLYFILDKSGSV-LHHWNEIYYFVEQLAHKF-ISPQL-RMSFIVFSTRGTTLMKLT- 130
G DL F++D S S+ ++ + +FV + +SP+ R+ + +ST+ T L
Sbjct: 652 GPIDLVFVIDGSKSLGEENFETVKHFVTGIIDSLAVSPKAARVGLLQYSTQVRTEFTLRG 711
Query: 131 -EDREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENRQGYRTASVIIALTDGEL 187
+++++ + ++ + G T + FER+ Q+ + V I TDG
Sbjct: 712 FSSAKEMKKAVTHMKYMGKGSMTGLALKHMFERSFTQVEGARPPSTQVPRVAIVFTDGRA 771
Query: 188 HEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADS--KDHVFPVNDGFQALQGI 245
+D+ A++++ G +Y VGV E +L IA H+F D + G
Sbjct: 772 QDDV----SEWASKAKANGITMYAVGVGKAIEEELQEIASEPIDKHLFYAED--FSTMGE 825
Query: 246 IHSILKKSCIEIL 258
I LK+ E L
Sbjct: 826 ISEKLKEGICEAL 838
>ref|NP_000085.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
dominant and recessive); Collagen VII, alpha-1
polypeptide [Homo sapiens]
sp|Q02388|CA17_HUMAN COLLAGEN ALPHA 1(VII) CHAIN PRECURSOR (LONG-CHAIN COLLAGEN) (LC
COLLAGEN)
gb|AAA75438.1| (L02870) alpha-1 type VII collagen [Homo sapiens]
Length = 2944
Score = 39.9 bits (91), Expect = 0.085
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYFVEQLAHKFISPQ----LRMSFIVFSTRGTT---LMKL 129
D+ F+LD S S+ ++ E+ F+E L F +R + + +S T L L
Sbjct: 38 DIVFLLDGSSSIGRSNFREVRSFLEGLVLPFSGAASAQGVRFATVQYSDDPRTEFGLDAL 97
Query: 130 TEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHE 189
+ IR + EL GG+T ++ ++ V I +TDG+ +
Sbjct: 98 GSGGDVIR-AIRELS--YKGGNTRTGAAILHVADHVFLPQLARPGVPKVCILITDGK-SQ 153
Query: 190 DLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIH 247
DL + A R + G ++ VG+K+ + +L R+A + D F VND F L+ ++
Sbjct: 154 DLV---DTAAQRLKGQGVKLFAVGIKNADPEELKRVASQPTSDFFFFVND-FSILRTLLP 209
Query: 248 SILKKSC 254
+ ++ C
Sbjct: 210 LVSRRVC 216
>pir||A54849 collagen alpha 1(VII) chain precursor - human
Length = 2944
Score = 39.9 bits (91), Expect = 0.085
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYFVEQLAHKFISPQ----LRMSFIVFSTRGTT---LMKL 129
D+ F+LD S S+ ++ E+ F+E L F +R + + +S T L L
Sbjct: 38 DIVFLLDGSSSIGRSNFREVRSFLEGLVLPFSGAASAQGVRFATVQYSDDPRTEFGLDAL 97
Query: 130 TEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHE 189
+ IR + EL GG+T ++ ++ V I +TDG+ +
Sbjct: 98 GSGGDVIR-AIRELS--YKGGNTRTGAAILHVADHVFLPQLARPGVPKVCILITDGK-SQ 153
Query: 190 DLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIH 247
DL + A R + G ++ VG+K+ + +L R+A + D F VND F L+ ++
Sbjct: 154 DLV---DTAAQRLKGQGVKLFAVGIKNADPEELKRVASQPTSDFFFFVND-FSILRTLLP 209
Query: 248 SILKKSC 254
+ ++ C
Sbjct: 210 LVSRRVC 216
>gb|AAA58965.1| (L23982) collagen type VII [Homo sapiens]
Length = 2912
Score = 39.9 bits (91), Expect = 0.085
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYFVEQLAHKFISPQ----LRMSFIVFSTRGTT---LMKL 129
D+ F+LD S S+ ++ E+ F+E L F +R + + +S T L L
Sbjct: 38 DIVFLLDGSSSIGRSNFREVRSFLEGLVLPFSGAASAQGVRFATVQYSDDPRTEFGLDAL 97
Query: 130 TEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHE 189
+ IR + EL GG+T ++ ++ V I +TDG+ +
Sbjct: 98 GSGGDVIR-AIRELS--YKGGNTRTGAAILHVADHVFLPQLARPGVPKVCILITDGK-SQ 153
Query: 190 DLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIH 247
DL + A R + G ++ VG+K+ + +L R+A + D F VND F L+ ++
Sbjct: 154 DLV---DTAAQRLKGQGVKLFAVGIKNADPEELKRVASQPTSDFFFFVND-FSILRTLLP 209
Query: 248 SILKKSC 254
+ ++ C
Sbjct: 210 LVSRRVC 216
>ref|NP_002371.1| matrilin 2; Human matrilin-2 precursor mRNA, partial cds [Homo
sapiens]
gb|AAC51260.2| (U69263) matrilin-2 precursor [Homo sapiens]
Length = 956
Score = 39.5 bits (90), Expect = 0.11
Identities = 46/202 (22%), Positives = 91/202 (44%), Gaps = 20/202 (9%)
Query: 78 DLYFILDKSGSV-LHHWNEIYYF-VEQLAHKFISPQL-RMSFIVFST--RGTTLMKLTED 132
DL FI+D S SV H + ++ F V+ L I P + R+ + + + + +K +
Sbjct: 57 DLVFIIDSSRSVNTHDYAKVKEFIVDILQFLDIGPDVTRVGLLQYGSTVKNEFSLKTFKR 116
Query: 133 REQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYR-----TASVIIALTDGEL 187
+ ++ + ++ ++ + G T + + + I + +G R VI+ +TDG
Sbjct: 117 KSEVERAVKRMRHLSTGTMTGLAIQY---ALNIAFSEAEGARPLRENVPRVIMIVTDGRP 173
Query: 188 HEDLFFYSEREANRSRDLGAIVYCVGV--KDFNETQLARIADSKDHVFPVNDGFQALQGI 245
+ + A ++RD G +++ +GV DFN + +DHVF V + F ++ +
Sbjct: 174 QDSV----AEVAAKARDTGILIFAIGVGQVDFNTLKSIGSEPHEDHVFLVAN-FSQIETL 228
Query: 246 IHSILKKSCIEILAAEPSTICA 267
KK C + + CA
Sbjct: 229 TSVFQKKLCTAHMCSTLEHNCA 250
>gb|AAC72024.1| (AF042093) alpha-1 type VII collagen non-collagenous domain [Canis
familiaris]
Length = 1253
Score = 39.5 bits (90), Expect = 0.11
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 78 DLYFILDKSGSVLH-HWNEIYYFVEQLAHKFISPQ----LRMSFIVFSTRGTT---LMKL 129
D+ F+LD S S+ ++ E+ F+E L F +R + + +S T L L
Sbjct: 38 DIVFLLDGSSSIGRGNFREVRGFLEGLVWPFSGAASAQGVRFAAVQYSDDPRTEFGLGAL 97
Query: 130 TEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHE 189
+ IR + EL GG+T ++ ++ V I +TDG+ +
Sbjct: 98 GSGGDVIR-AIRELS--YKGGNTRTGAAILHVADHVFLPQLARPGVPKVCILITDGK-SQ 153
Query: 190 DLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--SKDHVFPVNDGFQALQGIIH 247
DL + A R + G ++ VG+K+ + +L R+A + D F VND F L+ ++
Sbjct: 154 DLV---DTAAQRLKGQGVKLFAVGIKNADPEELKRVASQPTSDFFFFVND-FSILRTLLP 209
Query: 248 SILKKSC 254
+ ++ C
Sbjct: 210 LVSRRVC 216
>pir||T28797 hypothetical protein C16E9.1 - Caenorhabditis elegans
gb|AAC47957.1| (U39677) weak similarity to collagen chain alpha precursor
[Caenorhabditis elegans]
Length = 567
Score = 38.3 bits (87), Expect = 0.25
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 67 EDGGPACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKF-ISPQ-LRMSFIVFS--TR 122
E GP +D+ I D SGS+ ++ + F +QL + IS R+ + F+ T+
Sbjct: 382 EKRGPVKDCIYDIGIIFDSSGSLEKNFQKQLAFAKQLVEQMPISDNATRVGIVQFAGKTK 441
Query: 123 GTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIAL 182
L ++++ Q++ ++ + G T+ ++ ++ + YE + ++
Sbjct: 442 VRVLANFSQNKSQLKTIID--RSPFYSGTTFTNQALKKMA--ALYEESKRPNAKLKLMLF 497
Query: 183 TDGELHEDLFFYSEREANRSRDLGAIVYCVGVK-----DFNETQLARIADSKDHVFPVND 237
TDG ED SE E + G +VY VG+ N +L +A S +H + +D
Sbjct: 498 TDGYSAEDT---SEGE-EALKSQGVVVYTVGISTDKSAGLNMKELRGMATSSEHYYDSSD 553
>pir||B83262 hypothetical protein PA3073 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG06461.1|AE004731_9 (AE004731) hypothetical protein [Pseudomonas aeruginosa]
Length = 340
Score = 37.5 bits (85), Expect = 0.43
Identities = 39/151 (25%), Positives = 69/151 (44%), Gaps = 13/151 (8%)
Query: 44 RHRLPVALTATLVLICAGQGGRREDGGPACYGGFDLYFILDKSGSVLHH---WNEIYY-- 98
R ++ AL L+L+ A + D P G DL +D SGS+ + W +
Sbjct: 57 RQQVRFALLWFLLLLAAARPQWVGDPLPLPASGRDLLLAVDVSGSMDYRDMRWQDDEISR 116
Query: 99 --FVEQLAHKFISPQL--RMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYM 154
+++L FI + R+ I+F ++ LT DR +R L+E Q + G +T +
Sbjct: 117 LELIKKLFGDFIEDRRGDRVGLILFGSQAYLQAPLTFDRHTVRVWLDEAQIGIAGKNTAI 176
Query: 155 HEGFERASEQIYYENRQGYRTASVIIALTDG 185
+ A +++ RQ + V++ +TDG
Sbjct: 177 GDAIGLAVKRL----RQRPAESRVLVLITDG 203
>ref|NP_002370.1| matrilin 1, cartilage matrix protein; cartilage matrix protein
[Homo sapiens]
ref|XP_001373.1| matrilin 1, cartilage matrix protein [Homo sapiens]
sp|P21941|CAMA_HUMAN CARTILAGE MATRIX PROTEIN PRECURSOR (MATRILIN-1)
pir||A37979 cartilage matrix protein precursor - human
gb|AAB38702.1| (M55682) cartilage matrix protein [Homo sapiens]
Length = 496
Score = 37.5 bits (85), Expect = 0.43
Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 45/237 (18%)
Query: 58 ICAGQGGRREDGGPACYGGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQLRMS 115
+C+G GG DL F++D S SV ++ + F+ Q+ +S +L
Sbjct: 264 VCSGGGGS---------SATDLVFLIDGSKSVRPENFELVKKFISQIVDTLDVSDKLAQV 314
Query: 116 FIV---FSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIY-----Y 167
+V S R + ++ I+ + + +YM +G + Y +
Sbjct: 315 GLVQYSSSVRQEFPLGRFHTKKDIKAAVRNM--------SYMEKGTMTGAALKYLIDNSF 366
Query: 168 ENRQGYRTAS--VIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARI 225
G R + V I TDG + Y A +++DLG ++ VGV + E +L I
Sbjct: 367 TVSSGARPGAQKVGIVFTDGRSQD----YINDAAKKAKDLGFKMFAVGVGNAVEDELREI 422
Query: 226 ADS--KDHVFPVNDGFQALQGIIHSILKKSCIEILAAEPSTICAGES---FQVVVRG 277
A +H F D F+ + I + KK C+E +P CA ES FQ V G
Sbjct: 423 ASEPVAEHYFYTAD-FKTINQIGKKLQKKICVE---EDP---CACESLVKFQAKVEG 472
>pir||S31211 collagen alpha 1(XIV) chain precursor - chicken
Length = 814
Score = 36.4 bits (82), Expect = 0.96
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 180 IALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKD--HVFPVND 237
I +TDG+ +D+ A RD G ++ +GVK+ + +L IA D HV+ V D
Sbjct: 264 ILITDGKSQDDVI----PPAKNLRDAGIELFAIGVKNADINELKEIASEPDSTHVYNVAD 319
Query: 238 GFQALQGIIHSILKKSCIEI 257
F + I+ + + C +
Sbjct: 320 -FNFMNSIVEGLTRTVCSRV 338
>pir||S31212 collagen alpha 1(XIV) chain precursor, short form - chicken
emb|CAA50063.1| (X70792) collagen XIV [Gallus gallus]
Length = 1857
Score = 36.4 bits (82), Expect = 0.96
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 180 IALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKD--HVFPVND 237
I +TDG+ +D+ A RD G ++ +GVK+ + +L IA D HV+ V D
Sbjct: 264 ILITDGKSQDDVI----PPAKNLRDAGIELFAIGVKNADINELKEIASEPDSTHVYNVAD 319
Query: 238 GFQALQGIIHSILKKSCIEI 257
F + I+ + + C +
Sbjct: 320 -FNFMNSIVEGLTRTVCSRV 338
>sp|P32018|CA1E_CHICK COLLAGEN ALPHA 1(XIV) CHAIN PRECURSOR (UNDULIN)
pir||S78476 collagen alpha 1(XIV) chain precursor, long form - chicken
emb|CAA50064.1| (X70793) collagen XIV [Gallus gallus]
Length = 1888
Score = 36.4 bits (82), Expect = 0.96
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 180 IALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKD--HVFPVND 237
I +TDG+ +D+ A RD G ++ +GVK+ + +L IA D HV+ V D
Sbjct: 264 ILITDGKSQDDVI----PPAKNLRDAGIELFAIGVKNADINELKEIASEPDSTHVYNVAD 319
Query: 238 GFQALQGIIHSILKKSCIEI 257
F + I+ + + C +
Sbjct: 320 -FNFMNSIVEGLTRTVCSRV 338
>gb|AAA48695.1| (M14792) cartilage matrix protein [Gallus gallus]
Length = 416
Score = 36.4 bits (82), Expect = 0.96
Identities = 48/203 (23%), Positives = 84/203 (40%), Gaps = 31/203 (15%)
Query: 72 ACYGG----FDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF--ISPQLRMSFIVFSTRGT 124
AC GG DL F++D S SV ++ + F+ Q+ Q ++ + +S+
Sbjct: 185 ACSGGSGSALDLVFLIDGSKSVRPENFELVKKFINQIVESLEVSEKQAQVGLVQYSSSVR 244
Query: 125 TLMKLTE--DREQIRQGLEELQKVLPGGDTYMHEGFERASEQIY-----YENRQGYRTA- 176
L + +++ I+ ++++ YM +G Y + G R
Sbjct: 245 QEFPLGQFKNKKDIKAAVKKM--------AYMEKGTMTGQALKYLVDSSFSIANGARPGV 296
Query: 177 -SVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADS--KDHVF 233
V I TDG + Y A +++DLG ++ VGV + E +L IA +H F
Sbjct: 297 PKVGIVFTDGRSQD----YITDAAKKAKDLGFRMFAVGVGNAVEDELREIASEPVAEHYF 352
Query: 234 PVNDGFQALQGIIHSILKKSCIE 256
D F+ + I + K C+E
Sbjct: 353 YTAD-FRTISNIGKKLQMKICVE 374
>gb|AAA63904.1| (M55683) cartilage matrix protein [Homo sapiens]
Length = 340
Score = 36.4 bits (82), Expect = 0.96
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 180 IALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADS--KDHVFPVND 237
I TDG + Y A +++DLG ++ VGV + E +L IA +H F D
Sbjct: 225 IVFTDGRSQD----YINDAAKKAKDLGFKMFAVGVGNAVEDELREIASEPVAEHYFYTAD 280
Query: 238 GFQALQGIIHSILKKSCIEILAAEPSTICAGES---FQVVVRG 277
F+ + I + KK C+E +P CA ES FQ V G
Sbjct: 281 -FKTINQIGKKLQKKICVE---EDP---CACESLVKFQAKVEG 316
>sp|P05099|CAMA_CHICK CARTILAGE MATRIX PROTEIN PRECURSOR (MATRILIN-1)
pir||A33809 cartilage matrix protein precursor - chicken
emb|CAA30915.1| (X12353) cartilage matrix protein [Gallus gallus]
Length = 493
Score = 36.4 bits (82), Expect = 0.96
Identities = 48/203 (23%), Positives = 84/203 (40%), Gaps = 31/203 (15%)
Query: 72 ACYGG----FDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF--ISPQLRMSFIVFSTRGT 124
AC GG DL F++D S SV ++ + F+ Q+ Q ++ + +S+
Sbjct: 262 ACSGGSGSALDLVFLIDGSKSVRPENFELVKKFINQIVESLEVSEKQAQVGLVQYSSSVR 321
Query: 125 TLMKLTE--DREQIRQGLEELQKVLPGGDTYMHEGFERASEQIY-----YENRQGYRTA- 176
L + +++ I+ ++++ YM +G Y + G R
Sbjct: 322 QEFPLGQFKNKKDIKAAVKKM--------AYMEKGTMTGQALKYLVDSSFSIANGARPGV 373
Query: 177 -SVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADS--KDHVF 233
V I TDG + Y A +++DLG ++ VGV + E +L IA +H F
Sbjct: 374 PKVGIVFTDGRSQD----YITDAAKKAKDLGFRMFAVGVGNAVEDELREIASEPVAEHYF 429
Query: 234 PVNDGFQALQGIIHSILKKSCIE 256
D F+ + I + K C+E
Sbjct: 430 YTAD-FRTISNIGKKLQMKICVE 451
>emb|CAB45562.1| (AJ238798) CTRP protein [Plasmodium berghei]
dbj|BAA82322.1| (AB027129) adhesive protein-like molecule [Plasmodium berghei]
gb|AAF73158.1|AF149771_1 (AF149771) ookinete protein [Plasmodium berghei]
Length = 1905
Score = 36.0 bits (81), Expect = 1.3
Identities = 44/179 (24%), Positives = 70/179 (38%), Gaps = 31/179 (17%)
Query: 73 CYGGFDLYFILDKSGSVLH-HWNE-IYYFVEQLAH--KFISPQLRMSFIVFSTRGTTLMK 128
C +DL ILD+S S+ +W E + F EQ+ K + + ++F+ R +
Sbjct: 60 CQSYYDLTLILDESRSIRKSNWVEYVVPFTEQIVKGLKIGENDIHVGILLFALRNRDYIT 119
Query: 129 LTEDREQIRQGLEELQKVL--------PGGDTYMHEGFERASEQIYYENRQGYRTASVII 180
D IR EL K + GGDTY+ E + + ++ V I
Sbjct: 120 FDND---IRYKKTELLKKVNDLNDDYRAGGDTYILEALKYSLKKYSMNKNARDDAPKVTI 176
Query: 181 ALTDG--------ELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKDH 231
TDG E H+ Y E+ + +GV E++L IA ++H
Sbjct: 177 LFTDGNDIHASKSEFHKMYSEYQEKHVK--------LLVLGVSAAEESKLKVIAGCENH 227
>pir||T23087 hypothetical protein H13N06.2 - Caenorhabditis elegans
emb|CAB17068.1| (Z99942) contains similarity to Pfam domain: PF00092 (von
Willebrand factor type A domain), Score=39.4,
E-value=2.6e-08, N=1~cDNA EST yk412d4.3 comes from this
gene~cDNA EST yk412d4.5 comes from this gene
[Caenorhabditis elegans]
Length = 460
Score = 35.6 bits (80), Expect = 1.6
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 78 DLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFS--TRGTTLMKLTEDREQ 135
D+ F+LD SG+V+ + + ++E++ K P+ RM+ I F+ TR ++ L E+
Sbjct: 297 DILFLLDSSGNVVQQYEKQKKYIEEIVRKLEHPR-RMALITFAGRTRQKIVIPLPEEPNG 355
Query: 136 IRQGLEELQKV-LPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFY 194
++ +E+L+K G T ++ + ++R ++ +TDG +D+
Sbjct: 356 -KKFIEKLRKARFLRGVTAAGAAISVTTQYVLQKSRH-----VQVVVVTDGFSFDDV--- 406
Query: 195 SEREANRSRDLGAIVYCVGVKDFN--ETQLARIADSKDHVF 233
E+++ R + + V + F + L I + DHVF
Sbjct: 407 -EKQSEALRAVVGMETFVTGRYFPVVKNVLHSIGGADDHVF 446
>emb|CAA06890.1| (AJ006140) matrilin-4 precursor, alternate splice product [Mus
musculus]
Length = 434
Score = 35.6 bits (80), Expect = 1.6
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 62 QGGRREDGGPAC----YGGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQ-LRM 114
+G R + G +C G DL ++D S SV ++ + FV Q+ +SP+ R+
Sbjct: 178 EGRRLQADGKSCDRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRV 237
Query: 115 SFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENR 170
+ FS+R T L +++Q + ++ + G T + E + +
Sbjct: 238 GLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP 297
Query: 171 QGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--S 228
+ V + TDG +D+ + A R+++ G ++Y VGV E +L IA S
Sbjct: 298 RDLNVPRVGLVFTDGRSQDDISVW----AARAKEEGIVMYAVGVGKAVEEELREIASEPS 353
Query: 229 KDHVFPVNDGFQALQGIIHSILKKSCIE 256
+ HV + F + ++ ++ C E
Sbjct: 354 ELHV-SYSPDFSTMTHLLENLKGSICPE 380
>ref|NP_038620.1| matrilin 4 [Mus musculus]
emb|CAA06889.1| (AJ006140) matrilin-4 precursor [Mus musculus]
Length = 624
Score = 35.6 bits (80), Expect = 1.6
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 62 QGGRREDGGPAC----YGGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQ-LRM 114
+G R + G +C G DL ++D S SV ++ + FV Q+ +SP+ R+
Sbjct: 368 EGRRLQADGKSCDRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRV 427
Query: 115 SFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENR 170
+ FS+R T L +++Q + ++ + G T + E + +
Sbjct: 428 GLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP 487
Query: 171 QGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIAD--S 228
+ V + TDG +D+ + A R+++ G ++Y VGV E +L IA S
Sbjct: 488 RDLNVPRVGLVFTDGRSQDDISVW----AARAKEEGIVMYAVGVGKAVEEELREIASEPS 543
Query: 229 KDHVFPVNDGFQALQGIIHSILKKSCIE 256
+ HV + F + ++ ++ C E
Sbjct: 544 ELHV-SYSPDFSTMTHLLENLKGSICPE 570
>gb|AAA29778.1| (M96815) thrombospondin related anonymous protein [Plasmodium
falciparum]
Length = 562
Score = 35.6 bits (80), Expect = 1.6
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 31/206 (15%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISP------QLRMSFIVFSTRGTTL 126
C DLY ++D SGS+ H N + + V LA K I + + VFS +
Sbjct: 43 CNDEVDLYLLMDCSGSIRRH-NWVNHAV-PLAMKLIQQLNLNDNAIHLYVNVFSNNAKEI 100
Query: 127 MKLTEDREQIRQGL-----EELQKVLPGGDTYMHEGF----ERASEQIYYENRQGYRTAS 177
++L D + ++ L LP G T + + + +++I EN
Sbjct: 101 IRLHSDASKNKEKALIIIRSLLSTNLPYGRTNLTDALLQVRKHLNDRINRENAN-----Q 155
Query: 178 VIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARI------ADSKDH 231
+++ LTDG D S +E+ + DLG + G+ R +D K +
Sbjct: 156 LVVILTDG--IPDSIQDSLKESRKLNDLGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCN 213
Query: 232 VFPVNDGFQALQGIIHSILKKSCIEI 257
++ + ++ ++ +I +K C+E+
Sbjct: 214 LY-ADSAWENVKNVIGPFMKAVCVEV 238
>ref|XP_007582.1| integrin, alpha 11 [Homo sapiens]
Length = 1234
Score = 35.2 bits (79), Expect = 2.2
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 38/203 (18%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKF-ISP-QLRMSFIVFSTRGTTLMKLT 130
C D+ +LD S S+ + W E+ +F+ + KF I P Q+++ + + L
Sbjct: 135 CQTYMDIVIVLDGSNSI-YPWVEVQHFLINILKKFYIGPGQIQVGVVQYGEDVVHEFHLN 193
Query: 131 EDREQIRQGLEELQKVLPGGDTYMHEGFE---RASEQIYYENRQGYRTASVIIALTDGEL 187
+ R ++ +E + G T F SE R+G + V+I +TDGE
Sbjct: 194 DYRS-VKDVVEAASHIEQRGGTETRTAFGIEFARSEAFQKGGRKGAK--KVMIVITDGES 250
Query: 188 HED----------------------LFFYSEREANRSRDLGAIVYCVGVKD----FNETQ 221
H+ L +Y+ R N L I Y D FN T
Sbjct: 251 HDSPDLEKVIQQSERDNVTRYAVAVLGYYNRRGINPETFLNEIKYIASDPDDKHFFNVTD 310
Query: 222 LARIADSKDHVFPVNDGFQALQG 244
A + KD V + D +L+G
Sbjct: 311 EAAL---KDIVDALGDRIFSLEG 330
>gb|AAF01258.1|AF109681_1 (AF109681) integrin alpha-11 subunit precursor [Homo sapiens]
Length = 1189
Score = 35.2 bits (79), Expect = 2.2
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 38/203 (18%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKF-ISP-QLRMSFIVFSTRGTTLMKLT 130
C D+ +LD S S+ + W E+ +F+ + KF I P Q+++ + + L
Sbjct: 159 CQTYMDIVIVLDGSNSI-YPWVEVQHFLINILKKFYIGPGQIQVGVVQYGEDVVHEFHLN 217
Query: 131 EDREQIRQGLEELQKVLPGGDTYMHEGFE---RASEQIYYENRQGYRTASVIIALTDGEL 187
+ R ++ +E + G T F SE R+G + V+I +TDGE
Sbjct: 218 DYRS-VKDVVEAASHIEQRGGTETRTAFGIEFARSEAFQKGGRKGAK--KVMIVITDGES 274
Query: 188 HED----------------------LFFYSEREANRSRDLGAIVYCVGVKD----FNETQ 221
H+ L +Y+ R N L I Y D FN T
Sbjct: 275 HDSPDLEKVIQQSERDNVTRYAVAVLGYYNRRGINPETFLNEIKYIASDPDDKHFFNVTD 334
Query: 222 LARIADSKDHVFPVNDGFQALQG 244
A + KD V + D +L+G
Sbjct: 335 EAAL---KDIVDALGDRIFSLEG 354
>ref|NP_036343.1| integrin, alpha 11 [Homo sapiens]
gb|AAD51919.2|AF137378_1 (AF137378) integrin alpha 11 subunit precursor [Homo sapiens]
Length = 1188
Score = 35.2 bits (79), Expect = 2.2
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 38/203 (18%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKF-ISP-QLRMSFIVFSTRGTTLMKLT 130
C D+ +LD S S+ + W E+ +F+ + KF I P Q+++ + + L
Sbjct: 159 CQTYMDIVIVLDGSNSI-YPWVEVQHFLINILKKFYIGPGQIQVGVVQYGEDVVHEFHLN 217
Query: 131 EDREQIRQGLEELQKVLPGGDTYMHEGFE---RASEQIYYENRQGYRTASVIIALTDGEL 187
+ R ++ +E + G T F SE R+G + V+I +TDGE
Sbjct: 218 DYRS-VKDVVEAASHIEQRGGTETRTAFGIEFARSEAFQKGGRKGAK--KVMIVITDGES 274
Query: 188 HED----------------------LFFYSEREANRSRDLGAIVYCVGVKD----FNETQ 221
H+ L +Y+ R N L I Y D FN T
Sbjct: 275 HDSPDLEKVIQQSERDNVTRYAVAVLGYYNRRGINPETFLNEIKYIASDPDDKHFFNVTD 334
Query: 222 LARIADSKDHVFPVNDGFQALQG 244
A + KD V + D +L+G
Sbjct: 335 EAAL---KDIVDALGDRIFSLEG 354
>ref|NP_034899.1| matrilin 1, cartilage matrix protein 1 [Mus musculus]
sp|P51942|CAMA_MOUSE CARTILAGE MATRIX PROTEIN PRECURSOR (MATRILIN-1)
pir||S66522 cartilage matrix protein precursor - mouse
gb|AAB06521.1| (U35035) cartilage matrix protein precursor [Mus musculus]
Length = 500
Score = 35.2 bits (79), Expect = 2.2
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 180 IALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADS--KDHVFPVND 237
I TDG + Y A +++DLG ++ VGV + E +L IA DH F D
Sbjct: 385 IVFTDGRSQD----YINDAARKAKDLGFKMFAVGVGNAVEEELREIASEPVADHYFYTAD 440
Query: 238 GFQALQGIIHSILKKSCIEILAAEPSTICAGES---FQVVVRG 277
F+ + I + K+ C+E +P CA ES F+ V G
Sbjct: 441 -FKTINQIGKKLQKQICVE---EDP---CACESILKFEAKVEG 476
>gb|AAG28466.1|AF195494_1 (AF195494) Misexpression suppressor of ras 4 [Drosophila
melanogaster]
Length = 1106
Score = 34.4 bits (77), Expect = 3.7
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 400 DDDGLPKKKWPTVDASYYGGRGVGGIKRMEVRWGEK-GSTEEGAKLEKAKNARVKMPEQE 458
++DG PKK +D + G+G E E+ TEE A+ E+A+ A +
Sbjct: 72 NEDGKPKKNDDVIDVTMANGQGFKDTPEEETTGTEETAETEETAETEEAEQAEESLLNSR 131
Query: 459 YEFPEPRNLNNNMRRPSSPRK 479
P +L N SP K
Sbjct: 132 KSTDTPVDLGANCLTTGSPSK 152
>gb|AAF57837.1| (AE003802) CG4903 gene product [Drosophila melanogaster]
Length = 1987
Score = 34.4 bits (77), Expect = 3.7
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 400 DDDGLPKKKWPTVDASYYGGRGVGGIKRMEVRWGEK-GSTEEGAKLEKAKNARVKMPEQE 458
++DG PKK +D + G+G E E+ TEE A+ E+A+ A +
Sbjct: 72 NEDGKPKKNDDVIDVTMANGQGFKDTPEEETTGTEETAETEETAETEEAEQAEESLLNSR 131
Query: 459 YEFPEPRNLNNNMRRPSSPRK 479
P +L N SP K
Sbjct: 132 KSTDTPVDLGANCLTTGSPSK 152
>emb|CAB75310.1| (AL139164) putative lipoprotein [Streptomyces coelicolor A3(2)]
Length = 532
Score = 34.4 bits (77), Expect = 3.7
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 114 MSFIVFSTRGTTLMKLT---EDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENR 170
++ + FS T++ +T + R ++ ++ L+ P T + G E E R
Sbjct: 222 VALVTFSDEAETVLPMTRLGDHRGRVHDAIDGLE---PTDSTNLGAGMETGYETAVEGRR 278
Query: 171 QGYRTASVIIA---LTDGELHEDLFFYSEREANRSRDLGAIVYCVGV-KDFNETQLARIA 226
+G V+++ G+ D ER A R+ G ++ VGV D+ + + R+A
Sbjct: 279 EGATNRVVLVSDALANTGDTDADTIL--ERIATERREHGITLFGVGVGSDYGDALMERLA 336
Query: 227 DSKD 230
D D
Sbjct: 337 DKGD 340
>emb|CAC18105.1| (AL021578) dJ453C12.1.2 (matrilin 4) [Homo sapiens]
Length = 619
Score = 34.0 bits (76), Expect = 4.9
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 62 QGGRREDGGPACY----GGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQ-LRM 114
+G + + G +C G DL ++D S SV ++ + FV Q+ +SP+ R+
Sbjct: 364 EGRQLQADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRV 423
Query: 115 SFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENR 170
+ FS+R T L +++Q + ++ + G T + E + +
Sbjct: 424 GLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP 483
Query: 171 QGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIA 226
+ V + TDG +D+ + A R+++ G ++Y VGV E +L IA
Sbjct: 484 RALNVPRVGLVFTDGRSQDDISVW----AARAKEEGIVMYAVGVGKAVEAELREIA 535
>emb|CAC18104.1| (AL021578) dJ453C12.1.1 (matrilin 4) [Homo sapiens]
Length = 580
Score = 34.0 bits (76), Expect = 4.9
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 62 QGGRREDGGPACY----GGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQ-LRM 114
+G + + G +C G DL ++D S SV ++ + FV Q+ +SP+ R+
Sbjct: 325 EGRQLQADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRV 384
Query: 115 SFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENR 170
+ FS+R T L +++Q + ++ + G T + E + +
Sbjct: 385 GLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP 444
Query: 171 QGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIA 226
+ V + TDG +D+ + A R+++ G ++Y VGV E +L IA
Sbjct: 445 RALNVPRVGLVFTDGRSQDDISVW----AARAKEEGIVMYAVGVGKAVEAELREIA 496
>ref|XP_009528.1| matrilin 4 [Homo sapiens]
Length = 581
Score = 34.0 bits (76), Expect = 4.9
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 62 QGGRREDGGPACY----GGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQ-LRM 114
+G + + G +C G DL ++D S SV ++ + FV Q+ +SP+ R+
Sbjct: 325 EGRQLQADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRV 384
Query: 115 SFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENR 170
+ FS+R T L +++Q + ++ + G T + E + +
Sbjct: 385 GLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP 444
Query: 171 QGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIA 226
+ V + TDG +D+ + A R+++ G ++Y VGV E +L IA
Sbjct: 445 RALNVPRVGLVFTDGRSQDDISVW----AARAKEEGIVMYAVGVGKAVEAELREIA 496
>ref|NP_003824.1| matrilin 4 [Homo sapiens]
emb|CAA07569.1| (AJ007581) matrilin-4 [Homo sapiens]
Length = 581
Score = 34.0 bits (76), Expect = 4.9
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 62 QGGRREDGGPACY----GGFDLYFILDKSGSVL-HHWNEIYYFVEQLAHKF-ISPQ-LRM 114
+G + + G +C G DL ++D S SV ++ + FV Q+ +SP+ R+
Sbjct: 325 EGRQLQADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRV 384
Query: 115 SFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDT--YMHEGFERASEQIYYENR 170
+ FS+R T L +++Q + ++ + G T + E + +
Sbjct: 385 GLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARP 444
Query: 171 QGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIA 226
+ V + TDG +D+ + A R+++ G ++Y VGV E +L IA
Sbjct: 445 RALNVPRVGLVFTDGRSQDDISVW----AARAKEEGIVMYAVGVGKAVEAELREIA 496
>gb|AAC47461.1| (U64899) thrombospondin-related anonymous protein [Plasmodium
gallinaceum]
Length = 614
Score = 33.6 bits (75), Expect = 6.4
Identities = 46/204 (22%), Positives = 84/204 (40%), Gaps = 26/204 (12%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYY---FVEQLAHKF-ISPQ-LRMSFIVFSTRGTTLM 127
C+ DLY ++D SGS+ ++N + Y VE++ IS Q + + VF T ++
Sbjct: 39 CHEKVDLYLLMDGSGSI-GYYNWVTYAVPLVEEIVQNLNISKQGIHLYLSVF----THIL 93
Query: 128 K--------LTEDREQIRQGLEELQ-KVLPGGDTYMHEGFERASEQIYYENRQGYRTASV 178
K + +R+ + L+ K G T + R + + +
Sbjct: 94 KEYIPLNSIFSTNRDFALNVIRSLRTKYSQNGSTNLTLALSRVLKNYFLTKGSREDAVQL 153
Query: 179 IIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGV-----KDFNETQLARIADSKDHVF 233
+I TDG D + +E N+ + + A +GV K+FN++ + K
Sbjct: 154 VIIFTDGS--PDNKESAMKEVNKLKKMKAKFAVIGVGMGINKEFNKSLVGCPLKEKKCDL 211
Query: 234 PVNDGFQALQGIIHSILKKSCIEI 257
+ +Q +I LK+ CIE+
Sbjct: 212 YSEASWNEVQNVIAPFLKEVCIEV 235
>sp|P15989|CA36_CHICK COLLAGEN ALPHA 3(VI) CHAIN PRECURSOR
pir||A37797 collagen alpha 3(VI) chain precursor - chicken
gb|AAA03201.1| (M24282) alpha-3 collagen type VI [Gallus gallus]
Length = 3137
Score = 33.6 bits (75), Expect = 6.4
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 44 RHR-LPVALTATLVLICAGQGGRREDGGPACYGGFDLYFILDKSGSVLHHWNEIYYFVEQ 102
+HR LP+A L+L G ++ D+ F++D S S+ E + V +
Sbjct: 3 KHRHLPLAAILGLLLSGFCSVGAQQQAAVRNVAVADIIFLVDSSWSI---GKEHFQLVRE 59
Query: 103 LAHKFISP------QLRMSFIVFSTRGTTLMKLTE--DREQIRQGLEELQKVLPGGDTYM 154
+ + R + + FS T +L + + + + + GG +
Sbjct: 60 FLYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSNQDVLSHIANMPYM--GGGSKT 117
Query: 155 HEGFERASEQIYYE---NRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYC 211
+G E E + +R VII LTDG+ +D+ S +S + I
Sbjct: 118 GKGLEYLIENHLTKAAGSRASEGVPQVIIVLTDGQSQDDVALPS--SVLKSAHVNMI--A 173
Query: 212 VGVKDFNETQLARIADS--KDHVFPVNDGFQALQGIIHSIL 250
VGV+D E +L IA H+F + + F AL GI+ ++
Sbjct: 174 VGVQDAVEGELKEIASRPFDTHLFNL-ENFTALHGIVGDLV 213
>gb|AAA29776.1| (M96813) thrombospondin related anonymous protein [Plasmodium
falciparum]
Length = 559
Score = 33.6 bits (75), Expect = 6.4
Identities = 44/206 (21%), Positives = 85/206 (40%), Gaps = 31/206 (15%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISP------QLRMSFIVFSTRGTTL 126
C DLY ++D SGS+ H N + + V LA K I + + +FS +
Sbjct: 43 CNDEVDLYLLMDCSGSIRRH-NWVNHAV-PLAMKLIQQLNLNENAIHLYLNIFSNNAREI 100
Query: 127 MKLTEDREQIRQGL-----EELQKVLPGGDTYMHEGF----ERASEQIYYENRQGYRTAS 177
++L D + ++ L LP G T + + + +++I EN
Sbjct: 101 IRLHSDASKNKEKALIIIKSLLSTNLPYGRTNLSDALLQVRKHLNDRINRENAN-----Q 155
Query: 178 VIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARI------ADSKDH 231
+++ LTDG D S +E+ + D G + G+ R +D K +
Sbjct: 156 LVVILTDG--IPDSIQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCN 213
Query: 232 VFPVNDGFQALQGIIHSILKKSCIEI 257
++ + ++ ++ +I +K C+E+
Sbjct: 214 LY-ADSAWENVKNVIGPFMKAVCVEV 238
>gb|AAA29774.1| (M96809) thrombospondin related anonymous protein [Plasmodium
falciparum]
Length = 559
Score = 33.6 bits (75), Expect = 6.4
Identities = 44/206 (21%), Positives = 85/206 (40%), Gaps = 31/206 (15%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISP------QLRMSFIVFSTRGTTL 126
C DLY ++D SGS+ H N + + V LA K I + + +FS +
Sbjct: 43 CNDEVDLYLLMDCSGSIRRH-NWVNHAV-PLAMKLIQQLNLNENAIHLYLNIFSNNAREI 100
Query: 127 MKLTEDREQIRQGL-----EELQKVLPGGDTYMHEGF----ERASEQIYYENRQGYRTAS 177
++L D + ++ L LP G T + + + +++I EN
Sbjct: 101 IRLHSDASKNKEKALIIIKSLLSTNLPYGRTNLSDALLQVRKHLNDRINRENAN-----Q 155
Query: 178 VIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARI------ADSKDH 231
+++ LTDG D S +E+ + D G + G+ R +D K +
Sbjct: 156 LVVILTDG--IPDSIQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCN 213
Query: 232 VFPVNDGFQALQGIIHSILKKSCIEI 257
++ + ++ ++ +I +K C+E+
Sbjct: 214 LY-ADSAWENVKNVIGPFMKAVCVEV 238
>gb|AAG12328.1|AF249739_1 (AF249739) sporozoite surface protein 2 [Plasmodium falciparum]
Length = 559
Score = 33.2 bits (74), Expect = 8.3
Identities = 44/206 (21%), Positives = 85/206 (40%), Gaps = 31/206 (15%)
Query: 73 CYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFI------SPQLRMSFIVFSTRGTTL 126
C DLY ++D SGS+ H N + + V LA K I + + +FS +
Sbjct: 43 CNDEVDLYLLMDCSGSIRRH-NWVNHAV-PLAMKLIQQLNLNESAIHLYVNIFSNNAKEI 100
Query: 127 MKLTEDREQIRQGL-----EELQKVLPGGDTYMHEGF----ERASEQIYYENRQGYRTAS 177
++L D + ++ L LP G T + + + +++I EN
Sbjct: 101 IRLHSDASKNKEKALIIIRSLLSTNLPYGRTNLSDALLQVRKHLNDRINRENAN-----Q 155
Query: 178 VIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARI------ADSKDH 231
+++ LTDG D S +E+ + D G + G+ R +D K +
Sbjct: 156 LVVILTDG--IPDSIQDSLKESRKLNDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCN 213
Query: 232 VFPVNDGFQALQGIIHSILKKSCIEI 257
++ + ++ ++ +I +K C+E+
Sbjct: 214 LY-ADSAWENVKNVIGPFMKAVCVEV 238
>pir||T21538 hypothetical protein F29C12.3 - Caenorhabditis elegans
emb|CAB04220.1| (Z81519) predicted using Genefinder [Caenorhabditis elegans]
Length = 880
Score = 33.2 bits (74), Expect = 8.3
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 121 TRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVII 180
TR + + +E R + + E++QK++ G D+Y +E E + +R T +
Sbjct: 29 TRAKKVSETSEKRRERFRAREDVQKLIRGADSYTKATYEEKCEFLNGISRTILET--TVE 86
Query: 181 ALTDGELHEDL 191
+LTD E ED+
Sbjct: 87 SLTDNEFFEDI 97
>sp|Q09370|YS41_CAEEL HYPOTHETICAL 52.5 KD PROTEIN ZK177.1 IN CHROMOSOME II
pir||T27770 hypothetical protein ZK177.1 - Caenorhabditis elegans
gb|AAG00044.1| (U21321) Hypothetical protein ZK177.1 [Caenorhabditis elegans]
Length = 460
Score = 33.2 bits (74), Expect = 8.3
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 132 DREQIRQGLEELQKVLPGGDTYMHEGF-ERASEQIYYENRQGYRTASVIIALTDGELHED 190
D ++ RQ + K + Y H GF + AS QIY N QGY + H
Sbjct: 319 DEQKSRQSTSQPDKEIVQSSQYSHNGFIQHASPQIYNYNYQGYTMVQAEAYQPQYQEHVQ 378
Query: 191 LFFYSEREANRS 202
YS+ N++
Sbjct: 379 YTQYSQGPINQT 390
Database: nr
Number of letters in database: 188,047,558
Number of sequences in database: 594,795
Lambda K H
0.319 0.138 0.421
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191580560
Number of Sequences: 594795
Number of extensions: 8089941
Number of successful extensions: 15470
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 15460
Number of HSP's gapped (non-prelim): 58
length of query: 598
length of database: 188,047,558
effective HSP length: 55
effective length of query: 543
effective length of database: 155,333,833
effective search space: 84346271319
effective search space used: 84346271319
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 74 (33.2 bits)
