BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] 147 to 249 (103 letters) Database: nr 1,220,597 sequences; 388,937,031 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 185 1e-46 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 53 7e-07 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 52 2e-06 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 51 2e-06 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 50 7e-06 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 49 1e-05 gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 47 5e-05 gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 47 5e-05 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 44 5e-04 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 44 6e-04 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 185 bits (470), Expect = 1e-46 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 53.1 bits (126), Expect = 7e-07 Identities = 32/87 (36%), Positives = 51/87 (57%), Gaps = 2/87 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQ 88 E V+ FLA+LE++K +++I Q+ Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQE 243 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 51.6 bits (122), Expect = 2e-06 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDK-DHFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + E E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 Y-EQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 51.2 bits (121), Expect = 2e-06 Identities = 31/87 (35%), Positives = 51/87 (57%), Gaps = 2/87 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQ 88 E V+ FLA+LE++K +++I Q+ Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQE 243 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 49.7 bits (117), Expect = 7e-06 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T VE +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHHVE--REKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHV 293 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 48.9 bits (115), Expect = 1e-05 Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E V+ FLAILE++K +++I Q+ + I I Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYI 310 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 47.0 bits (110), Expect = 5e-05 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 47.0 bits (110), Expect = 5e-05 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 43.5 bits (101), Expect = 5e-04 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 +T+L A+ + +R + +S E+ KET +++ + RL F LF + Sbjct: 172 ITDLTQAWLSILSRAK--HTRSHEVIKETISVRAQMTAILRRLNKHGICRFHDLFNPEQG 229 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 230 AAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 +T+L A+ + +R + +S E+ KET +++ + RL F LF + Sbjct: 172 ITDLTQAWLGILSRAK--HTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPKQG 229 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 230 AAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 154 1e-37 gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 154 2e-37 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 152 6e-37 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 143 4e-34 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 141 2e-33 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 138 1e-32 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 131 1e-30 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 130 3e-30 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 125 1e-28 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 121 2e-27 Sequences not found previously or not previously below threshold: gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 104 3e-22 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 101 2e-21 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 99 1e-20 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 98 3e-20 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 92 1e-18 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 86 6e-17 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 86 9e-17 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 83 6e-16 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 81 4e-15 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 79 1e-14 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 79 1e-14 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 79 1e-14 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 74 4e-13 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 69 1e-11 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 63 9e-10 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 60 8e-09 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 59 1e-08 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 57 4e-08 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 57 5e-08 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 53 7e-07 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 51 2e-06 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 51 3e-06 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 49 2e-05 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 49 2e-05 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 48 3e-05 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 47 5e-05 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 46 7e-05 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 46 2e-04 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 44 4e-04 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 44 4e-04 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 44 5e-04 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 44 5e-04 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 43 0.001 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 154 bits (391), Expect = 1e-37 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 154 bits (391), Expect = 2e-37 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 152 bits (386), Expect = 6e-37 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 143 bits (361), Expect = 4e-34 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 141 bits (355), Expect = 2e-33 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKSLA 255 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 138 bits (349), Expect = 1e-32 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKSLA 255 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 131 bits (331), Expect = 1e-30 Identities = 32/96 (33%), Positives = 51/96 (52%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T VE +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHHVE--REKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVK 294 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 130 bits (328), Expect = 3e-30 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + E E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 Y-EQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 125 bits (315), Expect = 1e-28 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + +S E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAK--HTRSHEVIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 121 bits (304), Expect = 2e-27 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + +S E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAK--HTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 104 bits (260), Expect = 3e-22 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHV 256 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 101 bits (253), Expect = 2e-21 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHV 267 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 99.1 bits (246), Expect = 1e-20 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHV 267 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 97.9 bits (243), Expect = 3e-20 Identities = 26/93 (27%), Positives = 44/93 (46%), Gaps = 2/93 (2%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 L EL++ + R +L ++ +E + ++ +V RLK F LFT E Sbjct: 137 LQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLEEG 194 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 VV F+AILE+ K ++ + Q F I++ Sbjct: 195 KLGVVVTFMAILELVKEQMVELVQNEAFGAIHV 227 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 92.1 bits (228), Expect = 1e-18 Identities = 23/96 (23%), Positives = 45/96 (45%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVK 260 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 86.4 bits (213), Expect = 6e-17 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKLV--QHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYV 284 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 86.0 bits (212), Expect = 9e-17 Identities = 28/98 (28%), Positives = 52/98 (52%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSS 242 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 83.3 bits (205), Expect = 6e-16 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFT-- 59 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 60 --FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYV 336 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 80.6 bits (198), Expect = 4e-15 Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFT-- 59 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 60 --FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYV 286 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 79.4 bits (195), Expect = 1e-14 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRRE 247 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 79.0 bits (194), Expect = 1e-14 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHF--NFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L + + F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELFE 205 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 206 -EQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQG 243 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 78.7 bits (193), Expect = 1e-14 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDK--DHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V +L + F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFE 205 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 206 -EQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQG 243 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 74.0 bits (181), Expect = 4e-13 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 69.0 bits (168), Expect = 1e-11 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 62.9 bits (152), Expect = 9e-10 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEESFH--EVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWI 308 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 59.8 bits (144), Expect = 8e-09 Identities = 22/92 (23%), Positives = 44/92 (46%), Gaps = 1/92 (1%) Query: 6 ELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L +A+ + + E I ++ + I+ V L +D LF ++ + Sbjct: 139 DLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEAQNV 198 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 199 QEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 59.0 bits (142), Expect = 1e-08 Identities = 22/92 (23%), Positives = 44/92 (46%), Gaps = 1/92 (1%) Query: 6 ELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L +A+ + + E I ++ + I+ V L +D LF ++ + Sbjct: 139 DLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEAQNV 198 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 199 QEVITLFLATLELIKTQELILVQEESFGDIYL 230 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 57.1 bits (137), Expect = 4e-08 Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYV 249 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 57.1 bits (137), Expect = 5e-08 Identities = 21/92 (22%), Positives = 43/92 (45%), Gaps = 1/92 (1%) Query: 6 ELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L + + + + E I ++ + I+ V L +D LF ++ + Sbjct: 139 DLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEAQNV 198 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 199 QEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 53.2 bits (127), Expect = 7e-07 Identities = 24/97 (24%), Positives = 50/97 (50%), Gaps = 1/97 (1%) Query: 6 ELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 144 DLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSSTNK 203 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 204 DELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 51.3 bits (122), Expect = 2e-06 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 61 SEP-IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 +P ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 51.3 bits (122), Expect = 3e-06 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDH---FNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQ 87 S ++++T FLAILE++K I + Q Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQ 232 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 48.6 bits (115), Expect = 2e-05 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 +V FLA+LE+ + I++ + D I Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWI 235 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 48.6 bits (115), Expect = 2e-05 Identities = 22/93 (23%), Positives = 38/93 (40%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL +L R+ + +I + + I + +L +K F Sbjct: 147 LDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFIPQC 206 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 E +VV F+A+LE+ K I + Q NF +I Sbjct: 207 ECKLEVVVTFMAMLELIKRSEIKVVQYENFGEI 239 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 47.8 bits (113), Expect = 3e-05 Identities = 24/101 (23%), Positives = 48/101 (46%), Gaps = 4/101 (3%) Query: 2 IDLTELIVAYQRVK----NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ +R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIER 244 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 46.7 bits (110), Expect = 5e-05 Identities = 25/93 (26%), Positives = 48/93 (50%), Gaps = 1/93 (1%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 + +++ Y+++ R + K +EI+KE +T+ +++ + L K F + S Sbjct: 140 VEDIVNVYRKILERNKEKENK-IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSRS 198 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 +VV F+A+LE+ K + EQQ + DI I Sbjct: 199 KLEVVVSFVALLELIKLNRVAAEQQTAYGDIFI 231 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 46.3 bits (109), Expect = 7e-05 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 16 NRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLFTFS-EPIEQVVTHFLA 73 ++ NT K +I + E T++ + L K F F LF+ ++VT FLA Sbjct: 159 RKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSELFSPKTRSRLEIVTGFLA 218 Query: 74 ILEMSKAGIINIEQQRNFEDINI 96 ILE++K I + Q + F DI + Sbjct: 219 ILELAKLKKITLIQPKPFADITV 241 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 45.5 bits (107), Expect = 2e-04 Identities = 22/94 (23%), Positives = 47/94 (49%), Gaps = 3/94 (3%) Query: 3 DLTELIVAYQRVK--NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + +L +A+ + R L +V I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTV-IERDDYKIEDMMASIKQRLEKENVIRLSAIFEE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 + + +V++ FLA LE+ K ++ +EQ NF I Sbjct: 193 CQTLNEVISIFLASLELIKLHVVFVEQLSNFGAI 226 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 44.0 bits (103), Expect = 4e-04 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 4 LTELIVAYQRVKNRVELNTPKSVE---IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +T+L+ A + R +L P + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALE---RRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSN 195 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 196 DPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 44.0 bits (103), Expect = 4e-04 Identities = 22/94 (23%), Positives = 48/94 (50%), Gaps = 3/94 (3%) Query: 3 DLTELIVAYQRVK--NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + +L +A+ + R L +V I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTV-IERDDYKIEDMMASIKQRLEKENVISLSAIFEE 193 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 + + +V++ FLA LE+ K ++ +EQ NF I Sbjct: 194 CQTLNEVISIFLASLELIKLHVVFVEQLSNFGAI 227 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 44.0 bits (103), Expect = 5e-04 Identities = 21/92 (22%), Positives = 41/92 (43%), Gaps = 5/92 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 VV F+AILE +K +++I Q F I Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPI 235 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 43.6 bits (102), Expect = 5e-04 Identities = 22/94 (23%), Positives = 48/94 (50%), Gaps = 3/94 (3%) Query: 3 DLTELIVAYQRVK--NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + +L +A+ + R L +V I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTV-IERDDYKIEDMMASIKQRLEKENVISLSAIFEE 193 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 + + +V++ FLA LE+ K ++ +EQ NF I Sbjct: 194 CQTLNEVISIFLASLELIKLHVVFVEQFSNFGAI 227 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 42.8 bits (100), Expect = 0.001 Identities = 17/62 (27%), Positives = 32/62 (51%) Query: 33 FTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFE 92 ++Q+ V +RLK+ +F L +E VV FLA+LE+ + + ++Q+ Sbjct: 171 VSVQEQAGIVVARLKELGEASFRVLVQDTEDTLTVVARFLALLELYREKAVELDQETALG 230 Query: 93 DI 94 D+ Sbjct: 231 DL 232 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 127 3e-29 gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 127 3e-29 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 123 5e-28 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 116 5e-26 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 115 1e-25 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 115 1e-25 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 114 3e-25 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 113 3e-25 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 113 5e-25 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 113 6e-25 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 111 2e-24 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 111 2e-24 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 110 5e-24 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 107 3e-23 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 105 9e-23 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 104 2e-22 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 104 3e-22 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 104 3e-22 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 103 4e-22 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 103 5e-22 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 103 6e-22 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 102 1e-21 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 101 2e-21 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 100 7e-21 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 99 1e-20 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 97 6e-20 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 94 4e-19 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 91 3e-18 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 89 8e-18 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 89 1e-17 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 89 1e-17 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 87 4e-17 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 86 1e-16 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 85 2e-16 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 85 2e-16 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 84 3e-16 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 82 2e-15 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 82 2e-15 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 82 2e-15 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 81 3e-15 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 80 5e-15 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 72 2e-12 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 64 3e-10 Sequences not found previously or not previously below threshold: gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 73 8e-13 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 67 5e-11 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 67 6e-11 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 65 3e-10 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 55 2e-07 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 55 2e-07 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 52 2e-06 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 50 5e-06 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 50 6e-06 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 44 4e-04 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 43 5e-04 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 127 bits (320), Expect = 3e-29 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 127 bits (320), Expect = 3e-29 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 123 bits (310), Expect = 5e-28 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 116 bits (292), Expect = 5e-26 Identities = 30/96 (31%), Positives = 50/96 (51%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVK 294 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 115 bits (290), Expect = 1e-25 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKSLA 255 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 115 bits (290), Expect = 1e-25 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 114 bits (286), Expect = 3e-25 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKSLA 255 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 113 bits (285), Expect = 3e-25 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHV 256 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 113 bits (284), Expect = 5e-25 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYV 336 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 113 bits (283), Expect = 6e-25 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 111 bits (278), Expect = 2e-24 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYV 284 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 111 bits (278), Expect = 2e-24 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 110 bits (275), Expect = 5e-24 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 107 bits (268), Expect = 3e-23 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 105 bits (264), Expect = 9e-23 Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYV 286 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 104 bits (261), Expect = 2e-22 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQGK 244 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 104 bits (260), Expect = 3e-22 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSH--EVIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 104 bits (260), Expect = 3e-22 Identities = 28/98 (28%), Positives = 52/98 (52%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSS 242 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 103 bits (259), Expect = 4e-22 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSH--EVIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 103 bits (258), Expect = 5e-22 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL--KDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L + F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQGK 244 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 103 bits (257), Expect = 6e-22 Identities = 23/96 (23%), Positives = 45/96 (45%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVK 260 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 102 bits (255), Expect = 1e-21 Identities = 26/93 (27%), Positives = 44/93 (46%), Gaps = 2/93 (2%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 L EL++ + R +L ++ +E + ++ +V RLK F LFT E Sbjct: 137 LQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLEEG 194 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 VV F+AILE+ K ++ + Q F I++ Sbjct: 195 KLGVVVTFMAILELVKEQMVELVQNEAFGAIHV 227 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 101 bits (253), Expect = 2e-21 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 99.7 bits (248), Expect = 7e-21 Identities = 27/96 (28%), Positives = 50/96 (51%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEESFH--EVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQ 309 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 99.3 bits (247), Expect = 1e-20 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 96.7 bits (240), Expect = 6e-20 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 94.0 bits (233), Expect = 4e-19 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 90.9 bits (225), Expect = 3e-18 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 89.3 bits (221), Expect = 8e-18 Identities = 22/92 (23%), Positives = 44/92 (46%), Gaps = 1/92 (1%) Query: 6 ELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L +A+ + + E I ++ + I+ V L +D LF ++ + Sbjct: 139 DLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEAQNV 198 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 199 QEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 88.9 bits (220), Expect = 1e-17 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 61 S-EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 88.9 bits (220), Expect = 1e-17 Identities = 22/92 (23%), Positives = 44/92 (46%), Gaps = 1/92 (1%) Query: 6 ELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L +A+ + + E I ++ + I+ V L +D LF ++ + Sbjct: 139 DLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEAQNV 198 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 199 QEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 87.0 bits (215), Expect = 4e-17 Identities = 21/92 (22%), Positives = 43/92 (45%), Gaps = 1/92 (1%) Query: 6 ELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPI 64 +L + + + + E I ++ + I+ V L +D LF ++ + Sbjct: 139 DLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEAQNV 198 Query: 65 EQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 199 QEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 85.9 bits (212), Expect = 1e-16 Identities = 22/93 (23%), Positives = 38/93 (40%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL +L R+ + +I + + I + +L +K F Sbjct: 147 LDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFIPQC 206 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 E +VV F+A+LE+ K I + Q NF +I Sbjct: 207 ECKLEVVVTFMAMLELIKRSEIKVVQYENFGEI 239 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 85.1 bits (210), Expect = 2e-16 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 84.7 bits (209), Expect = 2e-16 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDEQQ-IFLTKGE 244 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 84.3 bits (208), Expect = 3e-16 Identities = 25/94 (26%), Positives = 48/94 (50%), Gaps = 1/94 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K +EI+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENK-IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFI 231 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 81.6 bits (201), Expect = 2e-15 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 +V FLA+LE+ + I++ + D I Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWI 235 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 81.6 bits (201), Expect = 2e-15 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 4 LTELIVAYQRVKNRVELNTPKSVE---IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +T+L+ A + R +L P + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALE---RRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSN 195 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 196 DPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 81.6 bits (201), Expect = 2e-15 Identities = 22/96 (22%), Positives = 48/96 (49%), Gaps = 3/96 (3%) Query: 3 DLTELIVAYQRVK--NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + +L +A+ + R L +V I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTV-IERDDYKIEDMMASIKQRLEKENVIRLSAIFEE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + +V++ FLA LE+ K ++ +EQ NF I + Sbjct: 193 CQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIIL 228 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 80.9 bits (199), Expect = 3e-15 Identities = 22/96 (22%), Positives = 49/96 (50%), Gaps = 3/96 (3%) Query: 3 DLTELIVAYQRVK--NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + +L +A+ + R L +V I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTV-IERDDYKIEDMMASIKQRLEKENVISLSAIFEE 193 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + +V++ FLA LE+ K ++ +EQ NF I + Sbjct: 194 CQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIIL 229 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 80.1 bits (197), Expect = 5e-15 Identities = 22/96 (22%), Positives = 49/96 (50%), Gaps = 3/96 (3%) Query: 3 DLTELIVAYQRVK--NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + +L +A+ + R L +V I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTV-IERDDYKIEDMMASIKQRLEKENVISLSAIFEE 193 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + + +V++ FLA LE+ K ++ +EQ NF I + Sbjct: 194 CQTLNEVISIFLASLELIKLHVVFVEQFSNFGAIIL 229 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 72.8 bits (178), Expect = 8e-13 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 72.0 bits (176), Expect = 2e-12 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 16 NRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLA 73 ++ NT K +I + E T++ + L K F F LF+ + ++VT FLA Sbjct: 159 RKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSELFSPKTRSRLEIVTGFLA 218 Query: 74 ILEMSKAGIINIEQQRNFEDINI 96 ILE++K I + Q + F DI + Sbjct: 219 ILELAKLKKITLIQPKPFADITV 241 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 67.0 bits (163), Expect = 5e-11 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVE-IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ ++ + S I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 66.6 bits (162), Expect = 6e-11 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVE-IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ ++ + S I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 64.7 bits (157), Expect = 3e-10 Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++T FLA LE+ K + ++Q+ NF+DI + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIIL 230 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 64.3 bits (156), Expect = 3e-10 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Query: 11 YQRVKNRVELNTPKSV----EIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQ 66 + ++ + P+ I ++Q+ V +RLK+ +F L +E Sbjct: 145 FAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQDTEDTLT 204 Query: 67 VVTHFLAILEMSKAGIINIEQQRNFEDINI 96 VV FLA+LE+ + + ++Q+ D+ + Sbjct: 205 VVARFLALLELYREKAVELDQETALGDLLV 234 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 55.4 bits (133), Expect = 2e-07 Identities = 13/71 (18%), Positives = 30/71 (41%) Query: 26 VEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINI 85 I + ++ + V + L++ F L ++V FLA+LE+ + ++ Sbjct: 176 THIHQPKTSVAEQAVLVVAELREHGTLTFTELTRACTDTFEIVARFLALLELYRNAHVSF 235 Query: 86 EQQRNFEDINI 96 +Q ++ I Sbjct: 236 DQPEPLGELRI 246 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 54.7 bits (131), Expect = 2e-07 Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTPKS-VEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + K + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 51.6 bits (123), Expect = 2e-06 Identities = 17/81 (20%), Positives = 32/81 (38%), Gaps = 9/81 (11%) Query: 21 NTPKSVEIRKE------TFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 TP+ V I ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFE 92 LA+LE+ + I EQ Sbjct: 225 LALLELYRTRAIAFEQAEPLG 245 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 50.0 bits (119), Expect = 5e-06 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 33 FTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQR 89 ++ + E + + LK + +F L ++V FLA+LE+ + + EQ Sbjct: 195 VSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRFLALLELYRTRAVAFEQSE 254 Query: 90 NFEDINI 96 + + Sbjct: 255 PLGALQV 261 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 50.0 bits (119), Expect = 6e-06 Identities = 18/102 (17%), Positives = 40/102 (38%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDH---FNF 54 + L + ++ V T K+ + + ++ + ++ + LK +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 43.9 bits (103), Expect = 4e-04 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ + P V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI-RTKDEFRP-FVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 43.5 bits (102), Expect = 5e-04 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 115 2e-25 gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 114 2e-25 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 111 2e-24 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 109 9e-24 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 107 3e-23 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 107 4e-23 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 105 1e-22 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 105 1e-22 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 104 3e-22 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 103 4e-22 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 103 4e-22 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 103 6e-22 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 102 1e-21 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 100 4e-21 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 100 4e-21 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 99 1e-20 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 99 1e-20 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 98 2e-20 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 98 3e-20 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 97 4e-20 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 97 7e-20 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 96 1e-19 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 96 1e-19 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 94 3e-19 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 94 3e-19 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 94 3e-19 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 94 5e-19 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 93 6e-19 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 92 2e-18 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 90 5e-18 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 89 2e-17 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 88 2e-17 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 88 3e-17 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 87 4e-17 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 87 6e-17 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 86 7e-17 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 86 8e-17 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 84 3e-16 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 84 5e-16 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 84 5e-16 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 83 7e-16 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 83 7e-16 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 83 8e-16 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 82 1e-15 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 81 3e-15 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 79 1e-14 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 78 2e-14 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 78 2e-14 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 77 6e-14 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 75 2e-13 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 74 3e-13 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 69 2e-11 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 68 2e-11 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 66 1e-10 Sequences not found previously or not previously below threshold: gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 52 1e-06 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 52 1e-06 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 52 2e-06 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 48 2e-05 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 48 3e-05 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 46 1e-04 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 45 2e-04 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 44 5e-04 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 44 5e-04 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 43 7e-04 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 115 bits (288), Expect = 2e-25 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 114 bits (287), Expect = 2e-25 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 111 bits (278), Expect = 2e-24 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 109 bits (273), Expect = 9e-24 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 107 bits (268), Expect = 3e-23 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 107 bits (268), Expect = 4e-23 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 105 bits (264), Expect = 1e-22 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 105 bits (262), Expect = 1e-22 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 104 bits (260), Expect = 3e-22 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 103 bits (259), Expect = 4e-22 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 103 bits (258), Expect = 4e-22 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 103 bits (257), Expect = 6e-22 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 102 bits (254), Expect = 1e-21 Identities = 32/97 (32%), Positives = 53/97 (53%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 100 bits (250), Expect = 4e-21 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 100 bits (250), Expect = 4e-21 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 98.9 bits (246), Expect = 1e-20 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQGK 244 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 98.9 bits (246), Expect = 1e-20 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 98.2 bits (244), Expect = 2e-20 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 97.8 bits (243), Expect = 3e-20 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL--KDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L + F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQGK 244 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 97.0 bits (241), Expect = 4e-20 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSH--EVIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 96.6 bits (240), Expect = 7e-20 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSH--EVIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 95.9 bits (238), Expect = 1e-19 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 95.9 bits (238), Expect = 1e-19 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 L EL++ + R +L ++ +E + ++ +V RLK F LFT E Sbjct: 137 LQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLEEG 194 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 VV F+AILE+ K ++ + Q F I++ Sbjct: 195 KLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 94.3 bits (234), Expect = 3e-19 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 93.9 bits (233), Expect = 3e-19 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 93.9 bits (233), Expect = 3e-19 Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTPKS-VEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + K + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 93.5 bits (232), Expect = 5e-19 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 93.2 bits (231), Expect = 6e-19 Identities = 27/96 (28%), Positives = 50/96 (51%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEESFH--EVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQ 309 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 92.0 bits (228), Expect = 2e-18 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 90.5 bits (224), Expect = 5e-18 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 88.5 bits (219), Expect = 2e-17 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 87.8 bits (217), Expect = 2e-17 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 87.8 bits (217), Expect = 3e-17 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 61 S-EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 87.0 bits (215), Expect = 4e-17 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 86.6 bits (214), Expect = 6e-17 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVE-IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ ++ + S I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 86.2 bits (213), Expect = 7e-17 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVE-IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ ++ + S I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 86.2 bits (213), Expect = 8e-17 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 84.3 bits (208), Expect = 3e-16 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 83.5 bits (206), Expect = 5e-16 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 83.5 bits (206), Expect = 5e-16 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 83.1 bits (205), Expect = 7e-16 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 83.1 bits (205), Expect = 7e-16 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 82.8 bits (204), Expect = 8e-16 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 82.4 bits (203), Expect = 1e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 81.2 bits (200), Expect = 3e-15 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K +EI+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENK-IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 78.9 bits (194), Expect = 1e-14 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 78.1 bits (192), Expect = 2e-14 Identities = 18/102 (17%), Positives = 40/102 (38%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDH---FNF 54 + L + ++ V T K+ + + ++ + ++ + LK +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 78.1 bits (192), Expect = 2e-14 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 4 LTELIVAYQRVKNRVELNTPKSVE---IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +T+L+ A + R +L P + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALE---RRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSN 195 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 196 DPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 76.6 bits (188), Expect = 6e-14 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ + P V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI-RTKDEFRP-FVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 75.1 bits (184), Expect = 2e-13 Identities = 16/85 (18%), Positives = 34/85 (39%) Query: 12 QRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHF 71 RV E + I + ++ + V + L++ F L ++V F Sbjct: 162 ARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRACTDTFEIVARF 221 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + ++ +Q ++ I Sbjct: 222 LALLELYRNAHVSFDQPEPLGELRI 246 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 74.3 bits (182), Expect = 3e-13 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Query: 11 YQRVKNRVELNTPKSV----EIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQ 66 + ++ + P+ I ++Q+ V +RLK+ +F L +E Sbjct: 145 FAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQDTEDTLT 204 Query: 67 VVTHFLAILEMSKAGIINIEQQRNFEDINII 97 VV FLA+LE+ + + ++Q+ D+ + Sbjct: 205 VVARFLALLELYREKAVELDQETALGDLLVR 235 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 68.5 bits (167), Expect = 2e-11 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTF-SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ + ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 68.1 bits (166), Expect = 2e-11 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 11/95 (11%) Query: 11 YQRVKNRVELNTPKSVEIRKE------TFTIQQATEQVTSRLKDKD---HFNFFSLFTFS 61 + + TP+ V I ++ + +++ + L+ + +F L Sbjct: 157 FAEIA--AFTFTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADC 214 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 +VV FLA+LE+ + I EQ + + Sbjct: 215 REPIEVVGCFLALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 65.8 bits (160), Expect = 1e-10 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 33 FTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQR 89 ++ + E + + LK + +F L ++V FLA+LE+ + + EQ Sbjct: 195 VSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRFLALLELYRTRAVAFEQSE 254 Query: 90 NFEDINI 96 + + Sbjct: 255 PLGALQV 261 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 52.3 bits (125), Expect = 1e-06 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETF-TIQQATEQVTSRLKDKD---HFNFFSL 57 +DL +L+ AY R N+ +++ + +++ A ++ + L + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQ-QRNFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 52.3 bits (125), Expect = 1e-06 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 51.9 bits (124), Expect = 2e-06 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 48.5 bits (115), Expect = 2e-05 Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 10/104 (9%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD--KDHFNFFSLF 58 + L +L+ AY + R + R+ ++++ + +RL +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKD-ARDILTRLIGSLRDWTALDSFL 227 Query: 59 -----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 228 IRYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 48.1 bits (114), Expect = 3e-05 Identities = 22/102 (21%), Positives = 44/102 (42%), Gaps = 10/102 (9%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFTFS 61 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 125 LYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPG 182 Query: 62 EP-----IEQVVTHFLAILEMSKAGIINIEQQRN-FEDINII 97 V F+A LE++K G++++ Q + I + Sbjct: 183 LEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVR 224 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 46.2 bits (109), Expect = 1e-04 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 45.4 bits (107), Expect = 2e-04 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T + + +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLAK--RTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 43.9 bits (103), Expect = 5e-04 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 43.9 bits (103), Expect = 5e-04 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIR-KETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P +R + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SEP----IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 43.5 bits (102), Expect = 7e-04 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD------KDHFNFFS 56 L +L+ AY + + T ++E ++ +++ A + + DHF Sbjct: 171 SLYDLLTAYA-TLRQRQAITQVTIE-KRHVWSLGDARLILARMVGSLDDWTALDHFLIRY 228 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 229 MTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 110 5e-24 gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 110 5e-24 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 105 1e-22 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 105 2e-22 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 104 2e-22 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 103 4e-22 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 103 5e-22 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 102 9e-22 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 102 1e-21 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 102 1e-21 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 100 6e-21 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 98 2e-20 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 98 2e-20 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 98 3e-20 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 97 4e-20 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 96 7e-20 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 96 8e-20 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 95 2e-19 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 94 3e-19 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 94 4e-19 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 94 4e-19 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 94 5e-19 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 92 2e-18 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 91 2e-18 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 90 4e-18 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 90 4e-18 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 89 9e-18 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 89 2e-17 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 88 2e-17 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 87 4e-17 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 87 6e-17 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 86 9e-17 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 85 2e-16 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 85 2e-16 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 85 2e-16 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 84 3e-16 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 84 3e-16 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 84 4e-16 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 84 4e-16 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 84 4e-16 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 82 1e-15 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 81 3e-15 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 81 3e-15 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 80 6e-15 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 79 1e-14 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 79 1e-14 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 78 2e-14 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 77 4e-14 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 77 4e-14 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 77 4e-14 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 77 6e-14 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 75 1e-13 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 74 3e-13 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 74 3e-13 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 74 3e-13 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 74 4e-13 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 74 5e-13 gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 73 7e-13 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 72 2e-12 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 70 8e-12 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 67 3e-11 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 67 4e-11 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 66 1e-10 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 65 2e-10 Sequences not found previously or not previously below threshold: ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaci... 63 7e-10 ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Bru... 57 4e-08 ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Bru... 55 2e-07 gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodos... 54 3e-07 ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Myc... 48 3e-05 ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Cau... 45 2e-04 ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair... 43 6e-04 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 110 bits (275), Expect = 5e-24 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 110 bits (275), Expect = 5e-24 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 105 bits (263), Expect = 1e-22 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 105 bits (262), Expect = 2e-22 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 104 bits (261), Expect = 2e-22 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 103 bits (259), Expect = 4e-22 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 103 bits (258), Expect = 5e-22 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 102 bits (256), Expect = 9e-22 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 102 bits (255), Expect = 1e-21 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 102 bits (255), Expect = 1e-21 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 100 bits (249), Expect = 6e-21 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 98.2 bits (244), Expect = 2e-20 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 97.8 bits (243), Expect = 2e-20 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 97.8 bits (243), Expect = 3e-20 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 97.0 bits (241), Expect = 4e-20 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 96.2 bits (239), Expect = 7e-20 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 96.2 bits (239), Expect = 8e-20 Identities = 32/97 (32%), Positives = 53/97 (53%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 95.1 bits (236), Expect = 2e-19 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQGK 244 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 94.3 bits (234), Expect = 3e-19 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++ + R +L ++ +E + ++ +V RLK F LFT Sbjct: 135 LALQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLE 192 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+AILE+ K ++ + Q F I++ Sbjct: 193 EGKLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 93.9 bits (233), Expect = 4e-19 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSH--EVIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 93.5 bits (232), Expect = 4e-19 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSH--EVIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 93.5 bits (232), Expect = 5e-19 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL--KDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L + F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQGK 244 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 92.0 bits (228), Expect = 2e-18 Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTPKS-VEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + K + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 91.2 bits (226), Expect = 2e-18 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 90.5 bits (224), Expect = 4e-18 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 90.5 bits (224), Expect = 4e-18 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 89.3 bits (221), Expect = 9e-18 Identities = 27/96 (28%), Positives = 50/96 (51%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEES--FHEVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQ 309 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 88.5 bits (219), Expect = 2e-17 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 88.2 bits (218), Expect = 2e-17 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 87.0 bits (215), Expect = 4e-17 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 86.6 bits (214), Expect = 6e-17 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 85.8 bits (212), Expect = 9e-17 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 84.7 bits (209), Expect = 2e-16 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 84.7 bits (209), Expect = 2e-16 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 84.7 bits (209), Expect = 2e-16 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLF-T 59 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 84.3 bits (208), Expect = 3e-16 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVE-IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ ++ + S I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 84.3 bits (208), Expect = 3e-16 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 83.9 bits (207), Expect = 4e-16 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVE-IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ ++ + S I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 83.9 bits (207), Expect = 4e-16 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 83.5 bits (206), Expect = 4e-16 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 82.4 bits (203), Expect = 1e-15 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 81.2 bits (200), Expect = 3e-15 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 80.8 bits (199), Expect = 3e-15 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 80.1 bits (197), Expect = 6e-15 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 78.9 bits (194), Expect = 1e-14 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ + P V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI-RTKDEFRP-FVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 78.9 bits (194), Expect = 1e-14 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K +EI+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENK-IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 78.1 bits (192), Expect = 2e-14 Identities = 18/96 (18%), Positives = 37/96 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 T+ E RV E + I + ++ + V + L++ F L Sbjct: 151 TLGPQEFAALAARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRA 210 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V FLA+LE+ + ++ +Q ++ I Sbjct: 211 CTDTFEIVARFLALLELYRNAHVSFDQPEPLGELRI 246 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 77.4 bits (190), Expect = 4e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 77.4 bits (190), Expect = 4e-14 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTF-SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ + ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 77.4 bits (190), Expect = 4e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 76.6 bits (188), Expect = 6e-14 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 75.4 bits (185), Expect = 1e-13 Identities = 18/102 (17%), Positives = 40/102 (38%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDH---FNF 54 + L + ++ V T K+ + + ++ + ++ + LK +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 74.3 bits (182), Expect = 3e-13 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T + + +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLAK--RTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 74.3 bits (182), Expect = 3e-13 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF- 58 + L +L+ AY + R + R+ ++++ A + +T + +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLI 228 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 229 RYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 74.3 bits (182), Expect = 3e-13 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 4 LTELIVAYQRVKNRVELNTPKSVE---IRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +T+L+ A + R +L P + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALE---RRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSN 195 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 196 DPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 73.9 bits (181), Expect = 4e-13 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Query: 11 YQRVKNRVELNTPKSV----EIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQ 66 + ++ + P+ I ++Q+ V +RLK+ +F L +E Sbjct: 145 FAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQDTEDTLT 204 Query: 67 VVTHFLAILEMSKAGIINIEQQRNFEDINII 97 VV FLA+LE+ + + ++Q+ D+ + Sbjct: 205 VVARFLALLELYREKAVELDQETALGDLLVR 235 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 73.5 bits (180), Expect = 5e-13 Identities = 23/106 (21%), Positives = 44/106 (40%), Gaps = 8/106 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD------KDHFNFF 55 L +L+ AY ++ R + + ++ +++ A + + DHF Sbjct: 170 ASLYDLLTAYATLRQRQAI--TQVTIEKRHVWSLGDARLILARMVGSLDDWTALDHFLIR 227 Query: 56 SLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 228 YMTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 73.1 bits (179), Expect = 7e-13 Identities = 21/111 (18%), Positives = 46/111 (40%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKDK---DHFNFFSL 57 +DL +L+ AY R N+ +++ + ++++ A ++ + L D + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQQR-NFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 71.6 bits (175), Expect = 2e-12 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 69.7 bits (170), Expect = 8e-12 Identities = 22/102 (21%), Positives = 44/102 (42%), Gaps = 10/102 (9%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFTFS 61 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 125 LYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPG 182 Query: 62 E-----PIEQVVTHFLAILEMSKAGIINIEQQRN-FEDINII 97 V F+A LE++K G++++ Q + I + Sbjct: 183 LEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVR 224 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 67.4 bits (164), Expect = 3e-11 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 T + + + ++ + E + + LK + +F L ++V F Sbjct: 177 LTPRPAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRF 236 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + + EQ + + Sbjct: 237 LALLELYRTRAVAFEQSEPLGALQV 261 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 67.0 bits (163), Expect = 4e-11 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIR-KETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P +R + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SE----PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 65.8 bits (160), Expect = 1e-10 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + I EQ + + Sbjct: 225 LALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 65.0 bits (158), Expect = 2e-10 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)] ref|NP_532392.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87481.1| (AE008092) AGR_C_3139p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42708.1| (AE009127) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 281 Score = 63.1 bits (153), Expect = 7e-10 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 +L +L+ AY ++ R + + +++ +++ +A E + S L D + Sbjct: 165 ANLYDLLSAYANLRQRQAI--TQVTIEKRQVWSLVEARELLNSLLGDVGEWTVLDQYLLQ 222 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + + + F A LE+ + G + I Q+ F+ I + RG Sbjct: 223 YVPDPAMRVTAIASAFAASLELVREGSLQIRQEGAFQPIYMRRG 266 >ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Brucella melitensis] gb|AAL52267.1| (AE009548) Hypothetical Cytosolic Protein [Brucella melitensis] Length = 283 Score = 57.3 bits (138), Expect = 4e-08 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 169 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 226 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 227 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 270 >ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Brucella suis 1330] gb|AAN29808.1|AE014391_3 (AE014391) conserved hypothetical protein [Brucella suis 1330] Length = 245 Score = 55.0 bits (132), Expect = 2e-07 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 131 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 188 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 189 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 232 >gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodospirillum rubrum] Length = 81 Score = 54.3 bits (130), Expect = 3e-07 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 7/69 (10%) Query: 36 QQATEQVTSRLKD-KDHFNFFSLFTFSE-----PIEQVVTHFLAILEMSKAGIINIEQQR 89 + A ++ + L D + V F+A LE++K G++++ Q Sbjct: 1 ENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDG 60 Query: 90 N-FEDINII 97 + I + Sbjct: 61 GVYAPITVR 69 >ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium] sp|P47455|Y213_MYCGE Hypothetical protein MG213 pir||E64223 hypothetical protein homolog MG213 - Mycoplasma genitalium gb|AAC71432.1| (U39701) conserved hypothetical protein [Mycoplasma genitalium] Length = 471 Score = 47.7 bits (113), Expect = 3e-05 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 I + +L A ++ + + I + +++Q +++ +K ++ Sbjct: 300 ISVLKLFHAMNKLLEMRLSSLLTNKNITIKELSVEQVQKELVLAIKQFNYQTVSLKRVLL 359 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VT F+A+L + +I +EQ+ ++ I Sbjct: 360 KLNHPISLMYFVTAFVALLVLLNNQVIGLEQKDYHSELYI 399 >ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15] gb|AAK23980.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus CB15] Length = 274 Score = 45.4 bits (107), Expect = 2e-04 Identities = 18/106 (16%), Positives = 39/106 (35%), Gaps = 11/106 (10%) Query: 6 ELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRL-KDKDHFNFFSLFTFSEP 63 +L + + + R T + ++ A +++ L K +D S+ Sbjct: 162 DLYGLMSAYITQRKREHSRHYAPRPPTAYPLEDARDRLRGLLPKMEDWTVLTSVAPIDRV 221 Query: 64 IEQ---------VVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +E+ + + A LE+ K G++ Q F+DI + Sbjct: 222 LEEDDGPSPASYLASTLSASLELVKEGVLEARQLEAFQDIYLRTRA 267 >ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair protein, RAD21 [Caenorhabditis elegans] pir||T16582 hypothetical protein K08A8.3 - Caenorhabditis elegans gb|AAA79748.1| (U38377) C. elegans COH-1 protein (corresponding sequence K08A8.3) [Caenorhabditis elegans] Length = 652 Score = 43.5 bits (102), Expect = 6e-04 Identities = 13/90 (14%), Positives = 30/90 (32%), Gaps = 3/90 (3%) Query: 16 NRVELNTPKSVEIRKETFTIQQATE--QVTSRL-KDKDHFNFFSLFTFSEPIEQVVTHFL 72 + + + ++ + + ++L + + F Sbjct: 558 KKRDEEKEEPETDEDNRWSKRTHALLQNIATKLENQNGQVELDEMLKKGTSRKVAAAKFY 617 Query: 73 AILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++L + K I+IEQ+ + DI I G N Sbjct: 618 SLLCLKKNQCIDIEQKEPYGDIMIKAGPNI 647 Searching..................................................done Results from round 6 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 106 6e-23 gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 106 6e-23 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 103 5e-22 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 102 1e-21 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 102 1e-21 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 101 2e-21 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 100 3e-21 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 100 4e-21 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 100 6e-21 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 100 7e-21 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 99 1e-20 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 96 7e-20 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 96 1e-19 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 95 1e-19 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 95 1e-19 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 94 3e-19 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 93 7e-19 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 93 8e-19 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 92 1e-18 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 91 2e-18 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 91 2e-18 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 90 7e-18 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 90 8e-18 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 89 1e-17 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 89 1e-17 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 89 2e-17 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 88 3e-17 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 86 8e-17 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 86 1e-16 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 85 2e-16 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 85 2e-16 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 84 4e-16 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 83 7e-16 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 83 8e-16 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 83 9e-16 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 82 1e-15 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 82 1e-15 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 82 1e-15 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 82 1e-15 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 82 2e-15 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 82 2e-15 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 81 2e-15 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 81 3e-15 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 80 4e-15 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 80 6e-15 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 80 6e-15 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 80 7e-15 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 79 1e-14 ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaci... 79 1e-14 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 78 2e-14 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 77 3e-14 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 77 3e-14 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 77 4e-14 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 75 2e-13 gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 75 2e-13 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 75 2e-13 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 74 5e-13 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 73 6e-13 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 73 9e-13 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 72 1e-12 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 72 1e-12 ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Bru... 71 3e-12 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 70 4e-12 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 69 1e-11 ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Bru... 68 3e-11 ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair... 67 7e-11 ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Myc... 66 8e-11 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 66 9e-11 ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Cau... 64 3e-10 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 64 3e-10 gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodos... 60 9e-09 Sequences not found previously or not previously below threshold: ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohe... 44 3e-04 ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Cae... 43 7e-04 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 106 bits (266), Expect = 6e-23 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 106 bits (266), Expect = 6e-23 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 103 bits (257), Expect = 5e-22 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 102 bits (255), Expect = 1e-21 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 102 bits (254), Expect = 1e-21 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGHA--IRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 101 bits (253), Expect = 2e-21 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 100 bits (251), Expect = 3e-21 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 100 bits (250), Expect = 4e-21 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 100 bits (249), Expect = 6e-21 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 99.7 bits (248), Expect = 7e-21 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 98.9 bits (246), Expect = 1e-20 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 96.2 bits (239), Expect = 7e-20 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 95.9 bits (238), Expect = 1e-19 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 95.5 bits (237), Expect = 1e-19 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 95.5 bits (237), Expect = 1e-19 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 94.3 bits (234), Expect = 3e-19 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T + I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGHA--IKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 93.2 bits (231), Expect = 7e-19 Identities = 27/98 (27%), Positives = 50/98 (50%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQ 242 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 92.8 bits (230), Expect = 8e-19 Identities = 32/97 (32%), Positives = 52/97 (52%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 92.4 bits (229), Expect = 1e-18 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++ + R +L ++ +E + ++ +V RLK F LFT Sbjct: 135 LALQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLE 192 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+AILE+ K ++ + Q F I++ Sbjct: 193 EGKLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 91.2 bits (226), Expect = 2e-18 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSH--EVIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 91.2 bits (226), Expect = 2e-18 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD--KDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQ 242 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 89.7 bits (222), Expect = 7e-18 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 89.7 bits (222), Expect = 8e-18 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSH--EVIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 89.3 bits (221), Expect = 1e-17 Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTPKS-VEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + K + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 88.9 bits (220), Expect = 1e-17 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 88.5 bits (219), Expect = 2e-17 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 87.8 bits (217), Expect = 3e-17 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 86.2 bits (213), Expect = 8e-17 Identities = 27/96 (28%), Positives = 50/96 (51%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEES--FHEVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQ 309 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 85.8 bits (212), Expect = 1e-16 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 85.1 bits (210), Expect = 2e-16 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 84.7 bits (209), Expect = 2e-16 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 83.9 bits (207), Expect = 4e-16 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 83.2 bits (205), Expect = 7e-16 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 82.8 bits (204), Expect = 8e-16 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 82.8 bits (204), Expect = 9e-16 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 82.4 bits (203), Expect = 1e-15 Identities = 21/106 (19%), Positives = 41/106 (37%), Gaps = 8/106 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 L +L+ AY ++ R + + ++ +++ A + + D Sbjct: 170 ASLYDLLTAYATLRQRQAI--TQVTIEKRHVWSLGDARLILARMVGSLDDWTALDHFLIR 227 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 228 YMTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 82.4 bits (203), Expect = 1e-15 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLF-T 59 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 82.4 bits (203), Expect = 1e-15 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 82.4 bits (203), Expect = 1e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 81.6 bits (201), Expect = 2e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 81.6 bits (201), Expect = 2e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 81.2 bits (200), Expect = 2e-15 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF- 58 + L +L+ AY + R + R+ ++++ A + +T + +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLI 228 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 229 RYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 81.2 bits (200), Expect = 3e-15 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 80.5 bits (198), Expect = 4e-15 Identities = 18/96 (18%), Positives = 37/96 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 T+ E RV E + I + ++ + V + L++ F L Sbjct: 151 TLGPQEFAALAARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRA 210 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V FLA+LE+ + ++ +Q ++ I Sbjct: 211 CTDTFEIVARFLALLELYRNAHVSFDQPEPLGELRI 246 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 80.1 bits (197), Expect = 6e-15 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 79.7 bits (196), Expect = 6e-15 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ + P V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI-RTKDEFRP-FVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 79.7 bits (196), Expect = 7e-15 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 78.9 bits (194), Expect = 1e-14 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)] ref|NP_532392.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87481.1| (AE008092) AGR_C_3139p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42708.1| (AE009127) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 281 Score = 78.9 bits (194), Expect = 1e-14 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 +L +L+ AY ++ R + + +++ +++ +A E + S L D + Sbjct: 165 ANLYDLLSAYANLRQRQAI--TQVTIEKRQVWSLVEARELLNSLLGDVGEWTVLDQYLLQ 222 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + + + F A LE+ + G + I Q+ F+ I + RG Sbjct: 223 YVPDPAMRVTAIASAFAASLELVREGSLQIRQEGAFQPIYMRRG 266 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 78.1 bits (192), Expect = 2e-14 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T ++ +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLA--KRTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 77.4 bits (190), Expect = 3e-14 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K +EI+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENK-IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 77.4 bits (190), Expect = 3e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 77.4 bits (190), Expect = 4e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 75.1 bits (184), Expect = 2e-13 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTF-SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ + ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 75.1 bits (184), Expect = 2e-13 Identities = 21/111 (18%), Positives = 46/111 (40%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKDK---DHFNFFSL 57 +DL +L+ AY R N+ +++ + ++++ A ++ + L D + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQQR-NFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 74.7 bits (183), Expect = 2e-13 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 73.5 bits (180), Expect = 5e-13 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 10/104 (9%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFT 59 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 123 AGLYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLP 180 Query: 60 FSE-----PIEQVVTHFLAILEMSKAGIINIEQQRN-FEDINII 97 V F+A LE++K G++++ Q + I + Sbjct: 181 PGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVR 224 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 73.1 bits (179), Expect = 6e-13 Identities = 18/102 (17%), Positives = 41/102 (39%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNF 54 + L + ++ V T K+ + + ++ + ++ + LK + +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 72.8 bits (178), Expect = 9e-13 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 4 LTELIVAYQRVKNRVELNTPKSV---EIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +T+L+ A + R +L P + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALE---RRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSN 195 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 196 DPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 72.4 bits (177), Expect = 1e-12 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 72.4 bits (177), Expect = 1e-12 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Query: 11 YQRVKNRVELNTPKSV----EIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQ 66 + ++ + P+ I ++Q+ V +RLK+ +F L +E Sbjct: 145 FAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQDTEDTLT 204 Query: 67 VVTHFLAILEMSKAGIINIEQQRNFEDINII 97 VV FLA+LE+ + + ++Q+ D+ + Sbjct: 205 VVARFLALLELYREKAVELDQETALGDLLVR 235 >ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Brucella melitensis] gb|AAL52267.1| (AE009548) Hypothetical Cytosolic Protein [Brucella melitensis] Length = 283 Score = 70.8 bits (173), Expect = 3e-12 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 169 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 226 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 227 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 270 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 70.4 bits (172), Expect = 4e-12 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 T + + + ++ + E + + LK + +F L ++V F Sbjct: 177 LTPRPAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRF 236 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + + EQ + + Sbjct: 237 LALLELYRTRAVAFEQSEPLGALQV 261 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 68.9 bits (168), Expect = 1e-11 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + I EQ + + Sbjct: 225 LALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Brucella suis 1330] gb|AAN29808.1|AE014391_3 (AE014391) conserved hypothetical protein [Brucella suis 1330] Length = 245 Score = 67.7 bits (165), Expect = 3e-11 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 131 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 188 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 189 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 232 >ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair protein, RAD21 [Caenorhabditis elegans] pir||T16582 hypothetical protein K08A8.3 - Caenorhabditis elegans gb|AAA79748.1| (U38377) C. elegans COH-1 protein (corresponding sequence K08A8.3) [Caenorhabditis elegans] Length = 652 Score = 66.6 bits (162), Expect = 7e-11 Identities = 13/90 (14%), Positives = 30/90 (32%), Gaps = 3/90 (3%) Query: 16 NRVELNTPKSVEIRKETFTIQQATE--QVTSRL-KDKDHFNFFSLFTFSEPIEQVVTHFL 72 + + + ++ + + ++L + + F Sbjct: 558 KKRDEEKEEPETDEDNRWSKRTHALLQNIATKLENQNGQVELDEMLKKGTSRKVAAAKFY 617 Query: 73 AILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++L + K I+IEQ+ + DI I G N Sbjct: 618 SLLCLKKNQCIDIEQKEPYGDIMIKAGPNI 647 >ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium] sp|P47455|Y213_MYCGE Hypothetical protein MG213 pir||E64223 hypothetical protein homolog MG213 - Mycoplasma genitalium gb|AAC71432.1| (U39701) conserved hypothetical protein [Mycoplasma genitalium] Length = 471 Score = 66.2 bits (161), Expect = 8e-11 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 I + +L A ++ + + I + +++Q +++ +K ++ Sbjct: 300 ISVLKLFHAMNKLLEMRLSSLLTNKNITIKELSVEQVQKELVLAIKQFNYQTVSLKRVLL 359 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VT F+A+L + +I +EQ+ ++ I Sbjct: 360 KLNHPISLMYFVTAFVALLVLLNNQVIGLEQKDYHSELYI 399 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 66.2 bits (161), Expect = 9e-11 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIR-KETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P +R + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SE----PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15] gb|AAK23980.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus CB15] Length = 274 Score = 64.3 bits (156), Expect = 3e-10 Identities = 18/106 (16%), Positives = 39/106 (35%), Gaps = 11/106 (10%) Query: 6 ELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRL-KDKDHFNFFSLFTFSEP 63 +L + + + R T + ++ A +++ L K +D S+ Sbjct: 162 DLYGLMSAYITQRKREHSRHYAPRPPTAYPLEDARDRLRGLLPKMEDWTVLTSVAPIDRV 221 Query: 64 IEQ---------VVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +E+ + + A LE+ K G++ Q F+DI + Sbjct: 222 LEEDDGPSPASYLASTLSASLELVKEGVLEARQLEAFQDIYLRTRA 267 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 64.3 bits (156), Expect = 3e-10 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodospirillum rubrum] Length = 81 Score = 59.7 bits (144), Expect = 9e-09 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 7/69 (10%) Query: 36 QQATEQVTSRLKD-KDHFNFFSLFTFSE-----PIEQVVTHFLAILEMSKAGIINIEQQR 89 + A ++ + L D + V F+A LE++K G++++ Q Sbjct: 1 ENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDG 60 Query: 90 N-FEDINII 97 + I + Sbjct: 61 GVYAPITVR 69 >ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohesin REC8 [Mus musculus] gb|AAF69524.1|AF262055_1 (AF262055) meiotic cohesin REC8 [Mus musculus] Length = 591 Score = 44.2 bits (104), Expect = 3e-04 Identities = 17/83 (20%), Positives = 30/83 (35%), Gaps = 2/83 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 EL + + + V +L+ +F SL S F +L + Sbjct: 507 ELPEVPMEMPPRPELSSEAVLRAVALKLQANKELDFSSLVPPLSPRKLASRV-FYLLLVL 565 Query: 78 SKAGIINIEQQRNFEDINIIRGV 100 S I+ +EQQ+ + + I G Sbjct: 566 STQKILLVEQQKPYGPLLIRPGP 588 >ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Caenorhabditis elegans] gb|AAA81127.1| (U40029) C. elegans COH-2 protein (corresponding sequence F10G7.4) [Caenorhabditis elegans] Length = 645 Score = 43.1 bits (101), Expect = 7e-04 Identities = 13/60 (21%), Positives = 32/60 (52%) Query: 42 VTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 V++ ++ +F S+ ++ +Q F ++L ++K+ I+++Q + +I I G N Sbjct: 555 VSADIETSGQADFSSVTATAKNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRPGAN 614 Searching..................................................done Results from round 7 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 105 9e-23 gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 105 9e-23 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 102 1e-21 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 102 1e-21 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 101 2e-21 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 101 2e-21 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 100 5e-21 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 99 1e-20 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 99 1e-20 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 99 1e-20 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 99 2e-20 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 95 1e-19 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 95 1e-19 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 94 3e-19 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 94 3e-19 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 94 4e-19 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 93 7e-19 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 92 1e-18 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 92 2e-18 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 92 2e-18 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 90 6e-18 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 90 6e-18 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 89 2e-17 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 88 2e-17 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 87 6e-17 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 87 7e-17 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 86 8e-17 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 86 8e-17 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 86 1e-16 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 84 4e-16 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 84 5e-16 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 84 6e-16 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 82 1e-15 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 82 1e-15 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 82 1e-15 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 82 1e-15 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 82 1e-15 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 82 1e-15 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 82 1e-15 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 82 2e-15 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 82 2e-15 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 81 3e-15 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 80 5e-15 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 80 6e-15 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 80 6e-15 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 80 7e-15 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 79 1e-14 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 78 2e-14 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 78 2e-14 ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaci... 78 3e-14 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 77 5e-14 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 77 6e-14 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 77 6e-14 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 75 2e-13 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 74 3e-13 gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 74 3e-13 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 74 3e-13 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 74 4e-13 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 73 9e-13 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 72 1e-12 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 72 2e-12 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 70 4e-12 ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Bru... 70 6e-12 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 69 1e-11 ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Bru... 67 4e-11 ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair... 67 5e-11 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 67 7e-11 ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Myc... 65 1e-10 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 65 2e-10 ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohe... 64 3e-10 ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Cau... 64 4e-10 gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodos... 61 3e-09 ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Cae... 58 2e-08 Sequences not found previously or not previously below threshold: gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Dr... 45 3e-04 gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila mela... 45 3e-04 ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila mela... 45 3e-04 gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanog... 44 4e-04 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 105 bits (264), Expect = 9e-23 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 105 bits (264), Expect = 9e-23 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 102 bits (255), Expect = 1e-21 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 102 bits (254), Expect = 1e-21 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 101 bits (253), Expect = 2e-21 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 101 bits (252), Expect = 2e-21 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 100 bits (249), Expect = 5e-21 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 99.3 bits (247), Expect = 1e-20 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 98.6 bits (245), Expect = 1e-20 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 98.6 bits (245), Expect = 1e-20 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 98.6 bits (245), Expect = 2e-20 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 95.5 bits (237), Expect = 1e-19 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 95.5 bits (237), Expect = 1e-19 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 94.3 bits (234), Expect = 3e-19 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 94.3 bits (234), Expect = 3e-19 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 93.9 bits (233), Expect = 4e-19 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 93.2 bits (231), Expect = 7e-19 Identities = 27/98 (27%), Positives = 50/98 (50%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQ 242 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 92.4 bits (229), Expect = 1e-18 Identities = 32/97 (32%), Positives = 52/97 (52%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 91.6 bits (227), Expect = 2e-18 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD--KDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQ 242 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 91.6 bits (227), Expect = 2e-18 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++ + R +L ++ +E + ++ +V RLK F LFT Sbjct: 135 LALQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLE 192 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+AILE+ K ++ + Q F I++ Sbjct: 193 EGKLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 90.1 bits (223), Expect = 6e-18 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 90.1 bits (223), Expect = 6e-18 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSH--EVIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 88.5 bits (219), Expect = 2e-17 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 88.2 bits (218), Expect = 2e-17 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + E+ KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSH--EVIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 86.6 bits (214), Expect = 6e-17 Identities = 27/97 (27%), Positives = 50/97 (50%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEES--FHEVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQP 310 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 86.6 bits (214), Expect = 7e-17 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 86.2 bits (213), Expect = 8e-17 Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTPKS-VEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + K + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 86.2 bits (213), Expect = 8e-17 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 85.8 bits (212), Expect = 1e-16 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 83.9 bits (207), Expect = 4e-16 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 83.5 bits (206), Expect = 5e-16 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 83.5 bits (206), Expect = 6e-16 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 82.4 bits (203), Expect = 1e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 82.4 bits (203), Expect = 1e-15 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 82.4 bits (203), Expect = 1e-15 Identities = 21/106 (19%), Positives = 41/106 (37%), Gaps = 8/106 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 L +L+ AY ++ R + + ++ +++ A + + D Sbjct: 170 ASLYDLLTAYATLRQRQAI--TQVTIEKRHVWSLGDARLILARMVGSLDDWTALDHFLIR 227 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 228 YMTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 82.0 bits (202), Expect = 1e-15 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + E I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 82.0 bits (202), Expect = 1e-15 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLF-T 59 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 82.0 bits (202), Expect = 1e-15 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 82.0 bits (202), Expect = 1e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 82.0 bits (202), Expect = 2e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 81.6 bits (201), Expect = 2e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 81.2 bits (200), Expect = 3e-15 Identities = 18/96 (18%), Positives = 37/96 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 T+ E RV E + I + ++ + V + L++ F L Sbjct: 151 TLGPQEFAALAARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRA 210 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V FLA+LE+ + ++ +Q ++ I Sbjct: 211 CTDTFEIVARFLALLELYRNAHVSFDQPEPLGELRI 246 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 80.1 bits (197), Expect = 5e-15 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF- 58 + L +L+ AY + R + R+ ++++ A + +T + +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLI 228 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 229 RYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 80.1 bits (197), Expect = 6e-15 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 80.1 bits (197), Expect = 6e-15 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 79.7 bits (196), Expect = 7e-15 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ R + V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI--RTKDEFRPFVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 78.9 bits (194), Expect = 1e-14 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 78.1 bits (192), Expect = 2e-14 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 78.1 bits (192), Expect = 2e-14 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K +EI+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENK-IEIKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)] ref|NP_532392.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87481.1| (AE008092) AGR_C_3139p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42708.1| (AE009127) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 281 Score = 77.8 bits (191), Expect = 3e-14 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 +L +L+ AY ++ R + + +++ +++ +A E + S L D + Sbjct: 165 ANLYDLLSAYANLRQRQAI--TQVTIEKRQVWSLVEARELLNSLLGDVGEWTVLDQYLLQ 222 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + + + F A LE+ + G + I Q+ F+ I + RG Sbjct: 223 YVPDPAMRVTAIASAFAASLELVREGSLQIRQEGAFQPIYMRRG 266 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 77.0 bits (189), Expect = 5e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 76.6 bits (188), Expect = 6e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 76.6 bits (188), Expect = 6e-14 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T ++ +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLA--KRTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 75.4 bits (185), Expect = 2e-13 Identities = 22/107 (20%), Positives = 44/107 (40%), Gaps = 10/107 (9%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFT 59 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 123 AGLYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLP 180 Query: 60 FSE-----PIEQVVTHFLAILEMSKAGIINIEQQRN-FEDINIIRGV 100 V F+A LE++K G++++ Q + I + Sbjct: 181 PGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVRPVA 227 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 74.3 bits (182), Expect = 3e-13 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTF-SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ + ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 74.3 bits (182), Expect = 3e-13 Identities = 21/111 (18%), Positives = 46/111 (40%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKDK---DHFNFFSL 57 +DL +L+ AY R N+ +++ + ++++ A ++ + L D + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQQR-NFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 74.3 bits (182), Expect = 3e-13 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 73.9 bits (181), Expect = 4e-13 Identities = 26/96 (27%), Positives = 45/96 (46%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 +T+L+ A +R + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALERRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPT 198 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 199 TEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 72.7 bits (178), Expect = 9e-13 Identities = 19/97 (19%), Positives = 37/97 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +I + I ++Q+ V +RLK+ +F L Sbjct: 139 SIGPEGFAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQD 198 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +E VV FLA+LE+ + + ++Q+ D+ + Sbjct: 199 TEDTLTVVARFLALLELYREKAVELDQETALGDLLVR 235 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 72.0 bits (176), Expect = 1e-12 Identities = 18/102 (17%), Positives = 41/102 (39%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNF 54 + L + ++ V T K+ + + ++ + ++ + LK + +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 71.6 bits (175), Expect = 2e-12 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 70.4 bits (172), Expect = 4e-12 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 T + + + ++ + E + + LK + +F L ++V F Sbjct: 177 LTPRPAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRF 236 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + + EQ + + Sbjct: 237 LALLELYRTRAVAFEQSEPLGALQV 261 >ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Brucella melitensis] gb|AAL52267.1| (AE009548) Hypothetical Cytosolic Protein [Brucella melitensis] Length = 283 Score = 70.0 bits (171), Expect = 6e-12 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 169 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 226 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 227 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 270 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 68.9 bits (168), Expect = 1e-11 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + I EQ + + Sbjct: 225 LALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Brucella suis 1330] gb|AAN29808.1|AE014391_3 (AE014391) conserved hypothetical protein [Brucella suis 1330] Length = 245 Score = 67.0 bits (163), Expect = 4e-11 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 131 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 188 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 189 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 232 >ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair protein, RAD21 [Caenorhabditis elegans] pir||T16582 hypothetical protein K08A8.3 - Caenorhabditis elegans gb|AAA79748.1| (U38377) C. elegans COH-1 protein (corresponding sequence K08A8.3) [Caenorhabditis elegans] Length = 652 Score = 67.0 bits (163), Expect = 5e-11 Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 3/90 (3%) Query: 16 NRVELNTPKSVEIRKETFTIQQATE--QVTSRLK-DKDHFNFFSLFTFSEPIEQVVTHFL 72 + + + ++ + + ++L+ + + F Sbjct: 558 KKRDEEKEEPETDEDNRWSKRTHALLQNIATKLENQNGQVELDEMLKKGTSRKVAAAKFY 617 Query: 73 AILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++L + K I+IEQ+ + DI I G N Sbjct: 618 SLLCLKKNQCIDIEQKEPYGDIMIKAGPNI 647 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 66.6 bits (162), Expect = 7e-11 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIR-KETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P +R + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SE----PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium] sp|P47455|Y213_MYCGE Hypothetical protein MG213 pir||E64223 hypothetical protein homolog MG213 - Mycoplasma genitalium gb|AAC71432.1| (U39701) conserved hypothetical protein [Mycoplasma genitalium] Length = 471 Score = 65.4 bits (159), Expect = 1e-10 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 I + +L A ++ + + I + +++Q +++ +K ++ Sbjct: 300 ISVLKLFHAMNKLLEMRLSSLLTNKNITIKELSVEQVQKELVLAIKQFNYQTVSLKRVLL 359 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VT F+A+L + +I +EQ+ ++ I Sbjct: 360 KLNHPISLMYFVTAFVALLVLLNNQVIGLEQKDYHSELYI 399 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 64.7 bits (157), Expect = 2e-10 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohesin REC8 [Mus musculus] gb|AAF69524.1|AF262055_1 (AF262055) meiotic cohesin REC8 [Mus musculus] Length = 591 Score = 64.3 bits (156), Expect = 3e-10 Identities = 17/83 (20%), Positives = 30/83 (35%), Gaps = 2/83 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 EL + + + V +L+ +F SL S F +L + Sbjct: 507 ELPEVPMEMPPRPELSSEAVLRAVALKLQANKELDFSSLVPPLSPRKLASRV-FYLLLVL 565 Query: 78 SKAGIINIEQQRNFEDINIIRGV 100 S I+ +EQQ+ + + I G Sbjct: 566 STQKILLVEQQKPYGPLLIRPGP 588 >ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15] gb|AAK23980.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus CB15] Length = 274 Score = 63.9 bits (155), Expect = 4e-10 Identities = 18/106 (16%), Positives = 39/106 (35%), Gaps = 11/106 (10%) Query: 6 ELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRL-KDKDHFNFFSLFTFSEP 63 +L + + + R T + ++ A +++ L K +D S+ Sbjct: 162 DLYGLMSAYITQRKREHSRHYAPRPPTAYPLEDARDRLRGLLPKMEDWTVLTSVAPIDRV 221 Query: 64 IEQ---------VVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +E+ + + A LE+ K G++ Q F+DI + Sbjct: 222 LEEDDGPSPASYLASTLSASLELVKEGVLEARQLEAFQDIYLRTRA 267 >gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodospirillum rubrum] Length = 81 Score = 61.2 bits (148), Expect = 3e-09 Identities = 12/72 (16%), Positives = 26/72 (35%), Gaps = 7/72 (9%) Query: 36 QQATEQVTSRLKD-KDHFNFFSLFTFSE-----PIEQVVTHFLAILEMSKAGIINIEQQR 89 + A ++ + L D + V F+A LE++K G++++ Q Sbjct: 1 ENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDG 60 Query: 90 N-FEDINIIRGV 100 + I + Sbjct: 61 GVYAPITVRPVA 72 >ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Caenorhabditis elegans] gb|AAA81127.1| (U40029) C. elegans COH-2 protein (corresponding sequence F10G7.4) [Caenorhabditis elegans] Length = 645 Score = 58.5 bits (141), Expect = 2e-08 Identities = 13/63 (20%), Positives = 34/63 (53%) Query: 39 TEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 ++V++ ++ +F S+ ++ +Q F ++L ++K+ I+++Q + +I I Sbjct: 552 LKKVSADIETSGQADFSSVTATAKNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRP 611 Query: 99 GVN 101 G N Sbjct: 612 GAN 614 >gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Drosophila melanogaster] Length = 715 Score = 44.6 bits (105), Expect = 3e-04 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 N 101 Sbjct: 709 T 709 >gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila melanogaster] gb|AAF82099.1|AF267746_1 (AF267746) rad21 mitotic cohesin [Drosophila melanogaster] Length = 715 Score = 44.6 bits (105), Expect = 3e-04 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 N 101 Sbjct: 709 T 709 >ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila melanogaster] gb|AAF01417.1|AF186473_1 (AF186473) mitotic cohesin SCC1 [Drosophila melanogaster] Length = 715 Score = 44.6 bits (105), Expect = 3e-04 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 N 101 Sbjct: 709 T 709 >gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanogaster] Length = 677 Score = 44.2 bits (104), Expect = 4e-04 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 612 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 670 Query: 101 N 101 Sbjct: 671 T 671 Searching..................................................done Results from round 8 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 105 8e-23 gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 105 8e-23 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 101 2e-21 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 101 2e-21 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 100 3e-21 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 100 6e-21 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 99 8e-21 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 99 2e-20 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 99 2e-20 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 98 2e-20 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 98 2e-20 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 95 1e-19 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 95 2e-19 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 94 4e-19 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 94 4e-19 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 94 5e-19 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 92 1e-18 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 92 1e-18 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 91 2e-18 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 90 4e-18 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 90 6e-18 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 89 1e-17 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 88 3e-17 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 87 4e-17 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 87 5e-17 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 86 7e-17 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 85 1e-16 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 85 2e-16 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 85 2e-16 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 84 4e-16 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 83 7e-16 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 83 8e-16 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 83 8e-16 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 82 1e-15 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 82 1e-15 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 82 1e-15 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 82 1e-15 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 82 2e-15 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 82 2e-15 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 82 2e-15 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 82 2e-15 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 82 2e-15 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 81 2e-15 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 80 6e-15 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 80 8e-15 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 79 1e-14 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 79 1e-14 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 78 2e-14 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 78 2e-14 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 78 2e-14 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 78 3e-14 ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaci... 78 3e-14 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 77 3e-14 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 77 4e-14 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 77 6e-14 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 77 7e-14 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 75 2e-13 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 74 3e-13 gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 74 4e-13 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 72 1e-12 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 71 3e-12 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 71 3e-12 ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Bru... 70 5e-12 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 69 9e-12 ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair... 68 3e-11 ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Bru... 67 4e-11 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 66 1e-10 ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohe... 65 1e-10 ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Myc... 65 2e-10 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 65 2e-10 ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Cau... 64 3e-10 gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodos... 62 1e-09 ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Cae... 60 4e-09 gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Dr... 54 3e-07 gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila mela... 54 3e-07 ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila mela... 54 3e-07 gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanog... 54 5e-07 Sequences not found previously or not previously below threshold: gb|EAA09166.1| (AAAB01008898) ebiP3994 [Anopheles gambiae str. P... 47 5e-05 dbj|BAB23527.1| (AK004746) RAD21 homolog (S. pombe)~data source:... 45 2e-04 emb|CAA66939.1| (X98293) HR21spA [Mus musculus] >gi|14193737|gb|... 45 2e-04 ref|NP_033035.1| (NM_009009) RAD21 homolog (S. pombe) [Mus muscu... 45 2e-04 ref|NP_006256.1| (NM_006265) RAD21 homolog; protein involved in ... 45 2e-04 emb|CAA66940.1| (X98294) HR21spA [Homo sapiens] 45 3e-04 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 105 bits (264), Expect = 8e-23 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 105 bits (264), Expect = 8e-23 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 101 bits (253), Expect = 2e-21 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 101 bits (253), Expect = 2e-21 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 100 bits (251), Expect = 3e-21 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 99.7 bits (248), Expect = 6e-21 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 99.3 bits (247), Expect = 8e-21 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 98.6 bits (245), Expect = 2e-20 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 98.6 bits (245), Expect = 2e-20 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 98.2 bits (244), Expect = 2e-20 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 97.8 bits (243), Expect = 2e-20 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 95.5 bits (237), Expect = 1e-19 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 94.7 bits (235), Expect = 2e-19 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 93.5 bits (232), Expect = 4e-19 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 93.5 bits (232), Expect = 4e-19 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 93.5 bits (232), Expect = 5e-19 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 92.0 bits (228), Expect = 1e-18 Identities = 27/98 (27%), Positives = 50/98 (50%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQ 242 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 92.0 bits (228), Expect = 1e-18 Identities = 32/97 (32%), Positives = 52/97 (52%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVKS 253 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 91.2 bits (226), Expect = 2e-18 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD--KDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQ 242 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 90.5 bits (224), Expect = 4e-18 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++ + R +L ++ +E + ++ +V RLK F LFT Sbjct: 135 LALQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLE 192 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+AILE+ K ++ + Q F I++ Sbjct: 193 EGKLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 89.7 bits (222), Expect = 6e-18 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 88.9 bits (220), Expect = 1e-17 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + + KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSHE--VIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 87.8 bits (217), Expect = 3e-17 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 87.4 bits (216), Expect = 4e-17 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + + KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSHE--VIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 87.0 bits (215), Expect = 5e-17 Identities = 27/97 (27%), Positives = 50/97 (50%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEES--FHEVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQP 310 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 86.2 bits (213), Expect = 7e-17 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 85.5 bits (211), Expect = 1e-16 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 85.1 bits (210), Expect = 2e-16 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTP-KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 85.1 bits (210), Expect = 2e-16 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 83.9 bits (207), Expect = 4e-16 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 83.1 bits (205), Expect = 7e-16 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 82.8 bits (204), Expect = 8e-16 Identities = 18/96 (18%), Positives = 37/96 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 T+ E RV E + I + ++ + V + L++ F L Sbjct: 151 TLGPQEFAALAARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRA 210 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 ++V FLA+LE+ + ++ +Q ++ I Sbjct: 211 CTDTFEIVARFLALLELYRNAHVSFDQPEPLGELRI 246 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 82.8 bits (204), Expect = 8e-16 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 82.4 bits (203), Expect = 1e-15 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ R + V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI--RTKDEFRPFVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 82.4 bits (203), Expect = 1e-15 Identities = 21/106 (19%), Positives = 41/106 (37%), Gaps = 8/106 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 L +L+ AY ++ R + + ++ +++ A + + D Sbjct: 170 ASLYDLLTAYATLRQRQAI--TQVTIEKRHVWSLGDARLILARMVGSLDDWTALDHFLIR 227 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 228 YMTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 82.0 bits (202), Expect = 1e-15 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLF-T 59 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 82.0 bits (202), Expect = 1e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 82.0 bits (202), Expect = 2e-15 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 82.0 bits (202), Expect = 2e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 82.0 bits (202), Expect = 2e-15 Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 82.0 bits (202), Expect = 2e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 81.6 bits (201), Expect = 2e-15 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 81.2 bits (200), Expect = 2e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 80.1 bits (197), Expect = 6e-15 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF- 58 + L +L+ AY + R + R+ ++++ A + +T + +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLI 228 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 229 RYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 79.7 bits (196), Expect = 8e-15 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 78.9 bits (194), Expect = 1e-14 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 78.9 bits (194), Expect = 1e-14 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 78.1 bits (192), Expect = 2e-14 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K I+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENKIE-IKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 78.1 bits (192), Expect = 2e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 78.1 bits (192), Expect = 2e-14 Identities = 26/96 (27%), Positives = 45/96 (46%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 +T+L+ A +R + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALERRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPT 198 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 199 TEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 77.8 bits (191), Expect = 3e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)] ref|NP_532392.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87481.1| (AE008092) AGR_C_3139p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42708.1| (AE009127) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 281 Score = 77.8 bits (191), Expect = 3e-14 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 +L +L+ AY ++ R + + +++ +++ +A E + S L D + Sbjct: 165 ANLYDLLSAYANLRQRQAI--TQVTIEKRQVWSLVEARELLNSLLGDVGEWTVLDQYLLQ 222 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + + + F A LE+ + G + I Q+ F+ I + RG Sbjct: 223 YVPDPAMRVTAIASAFAASLELVREGSLQIRQEGAFQPIYMRRG 266 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 77.4 bits (190), Expect = 3e-14 Identities = 19/97 (19%), Positives = 37/97 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +I + I ++Q+ V +RLK+ +F L Sbjct: 139 SIGPEGFAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQD 198 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +E VV FLA+LE+ + + ++Q+ D+ + Sbjct: 199 TEDTLTVVARFLALLELYREKAVELDQETALGDLLVR 235 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 77.4 bits (190), Expect = 4e-14 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 76.6 bits (188), Expect = 6e-14 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T ++ +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLA--KRTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 76.6 bits (188), Expect = 7e-14 Identities = 22/107 (20%), Positives = 44/107 (40%), Gaps = 10/107 (9%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFT 59 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 123 AGLYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLP 180 Query: 60 FSE-----PIEQVVTHFLAILEMSKAGIINIEQQRN-FEDINIIRGV 100 V F+A LE++K G++++ Q + I + Sbjct: 181 PGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVRPVA 227 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 74.7 bits (183), Expect = 2e-13 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTF-SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ + ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 74.3 bits (182), Expect = 3e-13 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 73.9 bits (181), Expect = 4e-13 Identities = 21/111 (18%), Positives = 46/111 (40%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKDK---DHFNFFSL 57 +DL +L+ AY R N+ +++ + ++++ A ++ + L D + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQQR-NFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 72.0 bits (176), Expect = 1e-12 Identities = 18/102 (17%), Positives = 41/102 (39%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNF 54 + L + ++ V T K+ + + ++ + ++ + LK + +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 71.2 bits (174), Expect = 3e-12 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 71.2 bits (174), Expect = 3e-12 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 T + + + ++ + E + + LK + +F L ++V F Sbjct: 177 LTPRPAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRF 236 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + + EQ + + Sbjct: 237 LALLELYRTRAVAFEQSEPLGALQV 261 >ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Brucella melitensis] gb|AAL52267.1| (AE009548) Hypothetical Cytosolic Protein [Brucella melitensis] Length = 283 Score = 70.1 bits (171), Expect = 5e-12 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 169 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 226 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 227 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 270 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 69.3 bits (169), Expect = 9e-12 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + I EQ + + Sbjct: 225 LALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair protein, RAD21 [Caenorhabditis elegans] pir||T16582 hypothetical protein K08A8.3 - Caenorhabditis elegans gb|AAA79748.1| (U38377) C. elegans COH-1 protein (corresponding sequence K08A8.3) [Caenorhabditis elegans] Length = 652 Score = 67.7 bits (165), Expect = 3e-11 Identities = 13/91 (14%), Positives = 32/91 (34%), Gaps = 3/91 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATE--QVTSRLK-DKDHFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + + ++L+ + + F Sbjct: 557 RKKRDEEKEEPETDEDNRWSKRTHALLQNIATKLENQNGQVELDEMLKKGTSRKVAAAKF 616 Query: 72 LAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++L + K I+IEQ+ + DI I G N Sbjct: 617 YSLLCLKKNQCIDIEQKEPYGDIMIKAGPNI 647 >ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Brucella suis 1330] gb|AAN29808.1|AE014391_3 (AE014391) conserved hypothetical protein [Brucella suis 1330] Length = 245 Score = 67.4 bits (164), Expect = 4e-11 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY R + ++ +++++A + + D + Sbjct: 131 SATLYDLLSAYAS--QRQRQAVSQVQIEKRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 188 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 189 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 232 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 65.8 bits (160), Expect = 1e-10 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIR-KETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P +R + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SE----PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohesin REC8 [Mus musculus] gb|AAF69524.1|AF262055_1 (AF262055) meiotic cohesin REC8 [Mus musculus] Length = 591 Score = 65.4 bits (159), Expect = 1e-10 Identities = 17/83 (20%), Positives = 30/83 (35%), Gaps = 2/83 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 EL + + + V +L+ +F SL S F +L + Sbjct: 507 ELPEVPMEMPPRPELSSEAVLRAVALKLQANKELDFSSLVPPLSPRKLASRV-FYLLLVL 565 Query: 78 SKAGIINIEQQRNFEDINIIRGV 100 S I+ +EQQ+ + + I G Sbjct: 566 STQKILLVEQQKPYGPLLIRPGP 588 >ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium] sp|P47455|Y213_MYCGE Hypothetical protein MG213 pir||E64223 hypothetical protein homolog MG213 - Mycoplasma genitalium gb|AAC71432.1| (U39701) conserved hypothetical protein [Mycoplasma genitalium] Length = 471 Score = 65.4 bits (159), Expect = 2e-10 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 I + +L A ++ + + I + +++Q +++ +K ++ Sbjct: 300 ISVLKLFHAMNKLLEMRLSSLLTNKNITIKELSVEQVQKELVLAIKQFNYQTVSLKRVLL 359 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VT F+A+L + +I +EQ+ ++ I Sbjct: 360 KLNHPISLMYFVTAFVALLVLLNNQVIGLEQKDYHSELYI 399 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 64.7 bits (157), Expect = 2e-10 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15] gb|AAK23980.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus CB15] Length = 274 Score = 64.3 bits (156), Expect = 3e-10 Identities = 18/106 (16%), Positives = 39/106 (35%), Gaps = 11/106 (10%) Query: 6 ELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRL-KDKDHFNFFSLFTFSEP 63 +L + + + R T + ++ A +++ L K +D S+ Sbjct: 162 DLYGLMSAYITQRKREHSRHYAPRPPTAYPLEDARDRLRGLLPKMEDWTVLTSVAPIDRV 221 Query: 64 IEQ---------VVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +E+ + + A LE+ K G++ Q F+DI + Sbjct: 222 LEEDDGPSPASYLASTLSASLELVKEGVLEARQLEAFQDIYLRTRA 267 >gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodospirillum rubrum] Length = 81 Score = 62.0 bits (150), Expect = 1e-09 Identities = 12/72 (16%), Positives = 26/72 (35%), Gaps = 7/72 (9%) Query: 36 QQATEQVTSRLKD-KDHFNFFSLFTFSE-----PIEQVVTHFLAILEMSKAGIINIEQQR 89 + A ++ + L D + V F+A LE++K G++++ Q Sbjct: 1 ENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDG 60 Query: 90 N-FEDINIIRGV 100 + I + Sbjct: 61 GVYAPITVRPVA 72 >ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Caenorhabditis elegans] gb|AAA81127.1| (U40029) C. elegans COH-2 protein (corresponding sequence F10G7.4) [Caenorhabditis elegans] Length = 645 Score = 60.4 bits (146), Expect = 4e-09 Identities = 13/63 (20%), Positives = 34/63 (53%) Query: 39 TEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 ++V++ ++ +F S+ ++ +Q F ++L ++K+ I+++Q + +I I Sbjct: 552 LKKVSADIETSGQADFSSVTATAKNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRP 611 Query: 99 GVN 101 G N Sbjct: 612 GAN 614 >gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Drosophila melanogaster] Length = 715 Score = 54.3 bits (130), Expect = 3e-07 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 N 101 Sbjct: 709 T 709 >gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila melanogaster] gb|AAF82099.1|AF267746_1 (AF267746) rad21 mitotic cohesin [Drosophila melanogaster] Length = 715 Score = 54.3 bits (130), Expect = 3e-07 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 N 101 Sbjct: 709 T 709 >ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila melanogaster] gb|AAF01417.1|AF186473_1 (AF186473) mitotic cohesin SCC1 [Drosophila melanogaster] Length = 715 Score = 54.3 bits (130), Expect = 3e-07 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 N 101 Sbjct: 709 T 709 >gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanogaster] Length = 677 Score = 53.9 bits (129), Expect = 5e-07 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 612 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 670 Query: 101 N 101 Sbjct: 671 T 671 >gb|EAA09166.1| (AAAB01008898) ebiP3994 [Anopheles gambiae str. PEST] Length = 727 Score = 46.9 bits (111), Expect = 5e-05 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 Q V SRL DH + +Q F ++L + K + I Q++ ++DI + Sbjct: 658 QMFLSVKSRLLKADHMMLSEMT-HRNNKKQAAQKFYSLLVLKKFKALEISQKQPYDDITV 716 Query: 97 IRGV 100 RG Sbjct: 717 TRGP 720 >dbj|BAB23527.1| (AK004746) RAD21 homolog (S. pombe)~data source:MGD, source key:MGI:108016, evidence:ISS~putative [Mus musculus] Length = 635 Score = 44.6 bits (105), Expect = 2e-04 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 592 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 633 >emb|CAA66939.1| (X98293) HR21spA [Mus musculus] gb|AAK56113.1|AF332085_1 (AF332085) Rad21 [Mus musculus] gb|AAK56114.1|AF332086_1 (AF332086) Rad21 [Mus musculus] Length = 635 Score = 44.6 bits (105), Expect = 2e-04 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 592 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 633 >ref|NP_033035.1| (NM_009009) RAD21 homolog (S. pombe) [Mus musculus] pir||JC4248 calcium binding PW29 protein - mouse dbj|BAA08408.1| (D49429) PW29 [Mus musculus] Length = 634 Score = 44.6 bits (105), Expect = 2e-04 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 591 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 632 >ref|NP_006256.1| (NM_006265) RAD21 homolog; protein involved in DNA double-strand break repair; nuclear matrix protein 1 [Homo sapiens] dbj|BAA07554.1| (D38551) The ha1237 gene product is related to S.pombe rad21 gene product. [Homo sapiens] Length = 631 Score = 44.6 bits (105), Expect = 2e-04 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 588 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 629 >emb|CAA66940.1| (X98294) HR21spA [Homo sapiens] Length = 631 Score = 44.6 bits (105), Expect = 3e-04 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 588 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 629 Searching..................................................done Results from round 9 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 103 5e-22 gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 103 5e-22 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 99 9e-21 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 99 1e-20 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 99 1e-20 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 98 2e-20 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 97 3e-20 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 97 4e-20 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 97 4e-20 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 96 8e-20 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 96 9e-20 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 94 3e-19 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 93 8e-19 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 92 1e-18 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 92 1e-18 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 92 2e-18 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 90 4e-18 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 90 6e-18 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 89 1e-17 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 88 2e-17 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 88 3e-17 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 87 4e-17 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 86 8e-17 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 86 9e-17 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 85 1e-16 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 85 1e-16 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 85 2e-16 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 84 3e-16 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 83 8e-16 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 82 1e-15 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 82 2e-15 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 82 2e-15 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 81 2e-15 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 81 3e-15 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 81 3e-15 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 81 3e-15 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 80 4e-15 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 80 4e-15 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 80 5e-15 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 80 6e-15 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 80 7e-15 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 80 7e-15 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 80 7e-15 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 79 1e-14 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 79 1e-14 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 78 2e-14 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 78 2e-14 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 77 4e-14 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 77 4e-14 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 77 4e-14 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 77 6e-14 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 77 6e-14 ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaci... 77 7e-14 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 76 8e-14 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 75 1e-13 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 75 2e-13 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 74 6e-13 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 73 8e-13 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 72 1e-12 gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 72 2e-12 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 71 3e-12 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 71 4e-12 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 69 1e-11 ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair... 69 1e-11 ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Bru... 69 2e-11 ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohe... 67 4e-11 ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Bru... 65 1e-10 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 65 2e-10 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 64 5e-10 ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Myc... 64 6e-10 ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Cae... 62 1e-09 ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Cau... 62 2e-09 gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodos... 61 4e-09 gb|EAA09166.1| (AAAB01008898) ebiP3994 [Anopheles gambiae str. P... 59 2e-08 gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Dr... 58 3e-08 gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila mela... 58 3e-08 ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila mela... 58 3e-08 gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanog... 57 4e-08 dbj|BAB23527.1| (AK004746) RAD21 homolog (S. pombe)~data source:... 52 2e-06 emb|CAA66939.1| (X98293) HR21spA [Mus musculus] >gi|14193737|gb|... 52 2e-06 ref|NP_033035.1| (NM_009009) RAD21 homolog (S. pombe) [Mus muscu... 52 2e-06 ref|NP_006256.1| (NM_006265) RAD21 homolog; protein involved in ... 52 2e-06 emb|CAA66940.1| (X98294) HR21spA [Homo sapiens] 52 2e-06 Sequences not found previously or not previously below threshold: gb|AAC26809.1| (AF051786) 14S cohesin RAD21 subunit; member of R... 50 8e-06 ref|XP_066618.1| (XM_066618) similar to RAD21 homolog; protein i... 47 7e-05 ref|NP_005123.1| (NM_005132) Rec8p, a meiotic recombination and ... 44 4e-04 gb|AAH04159.1|AAH04159 (BC004159) Rec8p, a meiotic recombination... 44 4e-04 gb|AAD01193.1| (AF006264) recombination and sister chromatid coh... 44 4e-04 gb|AAH19326.1|AAH19326 (BC019326) Unknown (protein for IMAGE:282... 44 4e-04 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 103 bits (258), Expect = 5e-22 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 103 bits (258), Expect = 5e-22 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 99.3 bits (247), Expect = 9e-21 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 99.0 bits (246), Expect = 1e-20 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 99.0 bits (246), Expect = 1e-20 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 98.2 bits (244), Expect = 2e-20 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 97.4 bits (242), Expect = 3e-20 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 97.4 bits (242), Expect = 4e-20 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 97.0 bits (241), Expect = 4e-20 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 96.3 bits (239), Expect = 8e-20 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 95.9 bits (238), Expect = 9e-20 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 94.3 bits (234), Expect = 3e-19 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 92.8 bits (230), Expect = 8e-19 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 92.4 bits (229), Expect = 1e-18 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 92.4 bits (229), Expect = 1e-18 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 91.6 bits (227), Expect = 2e-18 Identities = 33/96 (34%), Positives = 52/96 (53%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVK 252 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 90.5 bits (224), Expect = 4e-18 Identities = 27/98 (27%), Positives = 50/98 (50%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQ 242 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 90.1 bits (223), Expect = 6e-18 Identities = 32/96 (33%), Positives = 52/96 (53%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVK 252 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 89.3 bits (221), Expect = 1e-17 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD--KDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQ 242 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 88.2 bits (218), Expect = 2e-17 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++ + R +L ++ +E + ++ +V RLK F LFT Sbjct: 135 LALQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLE 192 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+AILE+ K ++ + Q F I++ Sbjct: 193 EGKLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 87.8 bits (217), Expect = 3e-17 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 87.4 bits (216), Expect = 4e-17 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + + KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSHE--VIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 86.3 bits (213), Expect = 8e-17 Identities = 27/97 (27%), Positives = 50/97 (50%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEES--FHEVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQP 310 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 85.9 bits (212), Expect = 9e-17 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTP-KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 85.5 bits (211), Expect = 1e-16 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + + KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSHE--VIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 85.1 bits (210), Expect = 1e-16 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 84.7 bits (209), Expect = 2e-16 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 84.3 bits (208), Expect = 3e-16 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 82.8 bits (204), Expect = 8e-16 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 82.4 bits (203), Expect = 1e-15 Identities = 18/97 (18%), Positives = 37/97 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 T+ E RV E + I + ++ + V + L++ F L Sbjct: 151 TLGPQEFAALAARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRA 210 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 ++V FLA+LE+ + ++ +Q ++ I Sbjct: 211 CTDTFEIVARFLALLELYRNAHVSFDQPEPLGELRIT 247 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 81.6 bits (201), Expect = 2e-15 Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 81.6 bits (201), Expect = 2e-15 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 81.2 bits (200), Expect = 2e-15 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 80.9 bits (199), Expect = 3e-15 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 80.9 bits (199), Expect = 3e-15 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ R + V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI--RTKDEFRPFVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 80.9 bits (199), Expect = 3e-15 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 80.5 bits (198), Expect = 4e-15 Identities = 21/106 (19%), Positives = 41/106 (37%), Gaps = 8/106 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 L +L+ AY ++ R + + ++ +++ A + + D Sbjct: 170 ASLYDLLTAYATLRQRQAI--TQVTIEKRHVWSLGDARLILARMVGSLDDWTALDHFLIR 227 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 228 YMTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 80.5 bits (198), Expect = 4e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 80.5 bits (198), Expect = 5e-15 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLF-T 59 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 80.1 bits (197), Expect = 6e-15 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 79.7 bits (196), Expect = 7e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 79.7 bits (196), Expect = 7e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 79.7 bits (196), Expect = 7e-15 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 78.9 bits (194), Expect = 1e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 78.5 bits (193), Expect = 1e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 78.2 bits (192), Expect = 2e-14 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF- 58 + L +L+ AY + R + R+ ++++ A + +T + +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLI 228 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 229 RYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 78.2 bits (192), Expect = 2e-14 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 77.4 bits (190), Expect = 4e-14 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 77.4 bits (190), Expect = 4e-14 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 77.0 bits (189), Expect = 4e-14 Identities = 26/96 (27%), Positives = 45/96 (46%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 +T+L+ A +R + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALERRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPT 198 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 199 TEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 76.6 bits (188), Expect = 6e-14 Identities = 19/97 (19%), Positives = 37/97 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +I + I ++Q+ V +RLK+ +F L Sbjct: 139 SIGPEGFAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQD 198 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +E VV FLA+LE+ + + ++Q+ D+ + Sbjct: 199 TEDTLTVVARFLALLELYREKAVELDQETALGDLLVR 235 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 76.6 bits (188), Expect = 6e-14 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K I+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENKIE-IKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)] ref|NP_532392.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87481.1| (AE008092) AGR_C_3139p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42708.1| (AE009127) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 281 Score = 76.6 bits (188), Expect = 7e-14 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 +L +L+ AY ++ R + + +++ +++ +A E + S L D + Sbjct: 165 ANLYDLLSAYANLRQRQAI--TQVTIEKRQVWSLVEARELLNSLLGDVGEWTVLDQYLLQ 222 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + + + F A LE+ + G + I Q+ F+ I + RG Sbjct: 223 YVPDPAMRVTAIASAFAASLELVREGSLQIRQEGAFQPIYMRRG 266 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 76.2 bits (187), Expect = 8e-14 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 75.5 bits (185), Expect = 1e-13 Identities = 22/107 (20%), Positives = 44/107 (40%), Gaps = 10/107 (9%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFT 59 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 123 AGLYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLP 180 Query: 60 FSE-----PIEQVVTHFLAILEMSKAGIINIEQQRN-FEDINIIRGV 100 V F+A LE++K G++++ Q + I + Sbjct: 181 PGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVRPVA 227 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 75.1 bits (184), Expect = 2e-13 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T ++ +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLA--KRTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 73.5 bits (180), Expect = 6e-13 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTFSEP-IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 72.8 bits (178), Expect = 8e-13 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 72.0 bits (176), Expect = 1e-12 Identities = 18/102 (17%), Positives = 41/102 (39%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNF 54 + L + ++ V T K+ + + ++ + ++ + LK + +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 71.6 bits (175), Expect = 2e-12 Identities = 21/111 (18%), Positives = 46/111 (40%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKDK---DHFNFFSL 57 +DL +L+ AY R N+ +++ + ++++ A ++ + L D + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQQR-NFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 70.8 bits (173), Expect = 3e-12 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 T + + + ++ + E + + LK + +F L ++V F Sbjct: 177 LTPRPAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRF 236 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + + EQ + + Sbjct: 237 LALLELYRTRAVAFEQSEPLGALQV 261 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 70.8 bits (173), Expect = 4e-12 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 68.9 bits (168), Expect = 1e-11 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + I EQ + + Sbjct: 225 LALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair protein, RAD21 [Caenorhabditis elegans] pir||T16582 hypothetical protein K08A8.3 - Caenorhabditis elegans gb|AAA79748.1| (U38377) C. elegans COH-1 protein (corresponding sequence K08A8.3) [Caenorhabditis elegans] Length = 652 Score = 68.9 bits (168), Expect = 1e-11 Identities = 13/91 (14%), Positives = 32/91 (34%), Gaps = 3/91 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATE--QVTSRLK-DKDHFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + + ++L+ + + F Sbjct: 557 RKKRDEEKEEPETDEDNRWSKRTHALLQNIATKLENQNGQVELDEMLKKGTSRKVAAAKF 616 Query: 72 LAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++L + K I+IEQ+ + DI I G N Sbjct: 617 YSLLCLKKNQCIDIEQKEPYGDIMIKAGPNI 647 >ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Brucella melitensis] gb|AAL52267.1| (AE009548) Hypothetical Cytosolic Protein [Brucella melitensis] Length = 283 Score = 68.5 bits (167), Expect = 2e-11 Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY + R ++ + ++ +++++A + + D + Sbjct: 169 SATLYDLLSAYASQRQRQAVSQVQIE--KRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 226 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 227 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 270 >ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohesin REC8 [Mus musculus] gb|AAF69524.1|AF262055_1 (AF262055) meiotic cohesin REC8 [Mus musculus] Length = 591 Score = 67.4 bits (164), Expect = 4e-11 Identities = 17/83 (20%), Positives = 30/83 (35%), Gaps = 2/83 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 EL + + + V +L+ +F SL S F +L + Sbjct: 507 ELPEVPMEMPPRPELSSEAVLRAVALKLQANKELDFSSLVPPLSPRKLASRV-FYLLLVL 565 Query: 78 SKAGIINIEQQRNFEDINIIRGV 100 S I+ +EQQ+ + + I G Sbjct: 566 STQKILLVEQQKPYGPLLIRPGP 588 >ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Brucella suis 1330] gb|AAN29808.1|AE014391_3 (AE014391) conserved hypothetical protein [Brucella suis 1330] Length = 245 Score = 65.5 bits (159), Expect = 1e-10 Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY + R ++ + ++ +++++A + + D + Sbjct: 131 SATLYDLLSAYASQRQRQAVSQVQIE--KRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 188 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 189 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 232 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 64.7 bits (157), Expect = 2e-10 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIR-KETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P +R + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SE----PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 63.5 bits (154), Expect = 5e-10 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium] sp|P47455|Y213_MYCGE Hypothetical protein MG213 pir||E64223 hypothetical protein homolog MG213 - Mycoplasma genitalium gb|AAC71432.1| (U39701) conserved hypothetical protein [Mycoplasma genitalium] Length = 471 Score = 63.5 bits (154), Expect = 6e-10 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 I + +L A ++ + + I + +++Q +++ +K ++ Sbjct: 300 ISVLKLFHAMNKLLEMRLSSLLTNKNITIKELSVEQVQKELVLAIKQFNYQTVSLKRVLL 359 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VT F+A+L + +I +EQ+ ++ I Sbjct: 360 KLNHPISLMYFVTAFVALLVLLNNQVIGLEQKDYHSELYI 399 >ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Caenorhabditis elegans] gb|AAA81127.1| (U40029) C. elegans COH-2 protein (corresponding sequence F10G7.4) [Caenorhabditis elegans] Length = 645 Score = 62.4 bits (151), Expect = 1e-09 Identities = 13/64 (20%), Positives = 35/64 (54%) Query: 39 TEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 ++V++ ++ +F S+ ++ +Q F ++L ++K+ I+++Q + +I I Sbjct: 552 LKKVSADIETSGQADFSSVTATAKNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRP 611 Query: 99 GVNY 102 G N+ Sbjct: 612 GANF 615 >ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15] gb|AAK23980.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus CB15] Length = 274 Score = 62.0 bits (150), Expect = 2e-09 Identities = 18/106 (16%), Positives = 39/106 (35%), Gaps = 11/106 (10%) Query: 6 ELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRL-KDKDHFNFFSLFTFSEP 63 +L + + + R T + ++ A +++ L K +D S+ Sbjct: 162 DLYGLMSAYITQRKREHSRHYAPRPPTAYPLEDARDRLRGLLPKMEDWTVLTSVAPIDRV 221 Query: 64 IEQ---------VVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +E+ + + A LE+ K G++ Q F+DI + Sbjct: 222 LEEDDGPSPASYLASTLSASLELVKEGVLEARQLEAFQDIYLRTRA 267 >gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodospirillum rubrum] Length = 81 Score = 60.8 bits (147), Expect = 4e-09 Identities = 12/72 (16%), Positives = 26/72 (35%), Gaps = 7/72 (9%) Query: 36 QQATEQVTSRLKD-KDHFNFFSLFTFSE-----PIEQVVTHFLAILEMSKAGIINIEQQR 89 + A ++ + L D + V F+A LE++K G++++ Q Sbjct: 1 ENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDG 60 Query: 90 N-FEDINIIRGV 100 + I + Sbjct: 61 GVYAPITVRPVA 72 >gb|EAA09166.1| (AAAB01008898) ebiP3994 [Anopheles gambiae str. PEST] Length = 727 Score = 58.5 bits (141), Expect = 2e-08 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 Q V SRL DH + +Q F ++L + K + I Q++ ++DI + Sbjct: 658 QMFLSVKSRLLKADHMMLSEMT-HRNNKKQAAQKFYSLLVLKKFKALEISQKQPYDDITV 716 Query: 97 IRGV 100 RG Sbjct: 717 TRGP 720 >gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Drosophila melanogaster] Length = 715 Score = 57.7 bits (139), Expect = 3e-08 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 NY 102 + Sbjct: 709 TF 710 >gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila melanogaster] gb|AAF82099.1|AF267746_1 (AF267746) rad21 mitotic cohesin [Drosophila melanogaster] Length = 715 Score = 57.7 bits (139), Expect = 3e-08 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 NY 102 + Sbjct: 709 TF 710 >ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila melanogaster] gb|AAF01417.1|AF186473_1 (AF186473) mitotic cohesin SCC1 [Drosophila melanogaster] Length = 715 Score = 57.7 bits (139), Expect = 3e-08 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 NY 102 + Sbjct: 709 TF 710 >gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanogaster] Length = 677 Score = 57.4 bits (138), Expect = 4e-08 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 612 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 670 Query: 101 NY 102 + Sbjct: 671 TF 672 >dbj|BAB23527.1| (AK004746) RAD21 homolog (S. pombe)~data source:MGD, source key:MGI:108016, evidence:ISS~putative [Mus musculus] Length = 635 Score = 52.0 bits (124), Expect = 2e-06 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 592 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 633 >emb|CAA66939.1| (X98293) HR21spA [Mus musculus] gb|AAK56113.1|AF332085_1 (AF332085) Rad21 [Mus musculus] gb|AAK56114.1|AF332086_1 (AF332086) Rad21 [Mus musculus] Length = 635 Score = 51.6 bits (123), Expect = 2e-06 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 592 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 633 >ref|NP_033035.1| (NM_009009) RAD21 homolog (S. pombe) [Mus musculus] pir||JC4248 calcium binding PW29 protein - mouse dbj|BAA08408.1| (D49429) PW29 [Mus musculus] Length = 634 Score = 51.6 bits (123), Expect = 2e-06 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 591 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 632 >ref|NP_006256.1| (NM_006265) RAD21 homolog; protein involved in DNA double-strand break repair; nuclear matrix protein 1 [Homo sapiens] dbj|BAA07554.1| (D38551) The ha1237 gene product is related to S.pombe rad21 gene product. [Homo sapiens] Length = 631 Score = 51.6 bits (123), Expect = 2e-06 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 588 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 629 >emb|CAA66940.1| (X98294) HR21spA [Homo sapiens] Length = 631 Score = 51.6 bits (123), Expect = 2e-06 Identities = 10/42 (23%), Positives = 17/42 (39%) Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 +Q F + L + K I + Q+ + DI G +H Sbjct: 588 TNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFH 629 >gb|AAC26809.1| (AF051786) 14S cohesin RAD21 subunit; member of RAD21/SCC1/MCD1 family [Xenopus laevis] Length = 629 Score = 49.7 bits (118), Expect = 8e-06 Identities = 15/69 (21%), Positives = 23/69 (32%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R+ K SL +Q F + L + K I + Q+ + DI Sbjct: 559 QQMLHGLQRVLAKTGAESISLLDLCRNTNRKQAAAKFYSFLVLKKQQAIELTQREPYSDI 618 Query: 95 NIIRGVNYH 103 G +H Sbjct: 619 VATPGPRFH 627 >ref|XP_066618.1| (XM_066618) similar to RAD21 homolog; protein involved in DNA double-strand break repair; nuclear matrix protein 1 [Homo sapiens] Length = 268 Score = 46.6 bits (110), Expect = 7e-05 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 45 RLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 ++ + + L+ +Q V F + L + K I + Q+ + +I G +H Sbjct: 209 QMLHAESISLLELYQN-TNRKQTVAKFYSFLVLKKQQAIELTQEELYSNIIATPGPKFH 266 >ref|NP_005123.1| (NM_005132) Rec8p, a meiotic recombination and sister chromatid cohesion phosphoprotein of the rad21p family [Homo sapiens] dbj|BAA91690.1| (AK001435) unnamed protein product [Homo sapiens] Length = 547 Score = 43.9 bits (103), Expect = 4e-04 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 463 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 521 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 522 SAQQILHVKQEKPYGRLLIQPGPRFH 547 >gb|AAH04159.1|AAH04159 (BC004159) Rec8p, a meiotic recombination and sister chromatid cohesion phosphoprotein of the rad21p family [Homo sapiens] Length = 547 Score = 43.9 bits (103), Expect = 4e-04 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 463 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 521 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 522 SAQQILHVKQEKPYGRLLIQPGPRFH 547 >gb|AAD01193.1| (AF006264) recombination and sister chromatid cohesion protein homolog [Homo sapiens] gb|AAH10887.1|AAH10887 (BC010887) Similar to Rec8p, a meiotic recombination and sister chromatid cohesion phosphoprotein of the rad21p family [Homo sapiens] Length = 547 Score = 43.9 bits (103), Expect = 4e-04 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 463 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 521 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 522 SAQQILHVKQEKPYGRLLIQPGPRFH 547 >gb|AAH19326.1|AAH19326 (BC019326) Unknown (protein for IMAGE:2823630) [Homo sapiens] Length = 362 Score = 43.9 bits (103), Expect = 4e-04 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 278 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 336 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 337 SAQQILHVKQEKPYGRLLIQPGPRFH 362 Searching..................................................done Results from round 10 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylell... 101 2e-21 gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylell... 101 2e-21 ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [B... 99 2e-20 ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [B... 99 2e-20 gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microb... 97 3e-20 ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xyl... 97 3e-20 gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkho... 97 4e-20 gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralsto... 97 5e-20 gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotob... 96 1e-19 gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudo... 95 1e-19 gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudo... 95 2e-19 ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Sta... 94 5e-19 ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ral... 92 1e-18 ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG135... 92 2e-18 ref|NP_718583.1| (NC_004347) conserved hypothetical protein [She... 91 2e-18 ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xan... 90 4e-18 ref|NP_465475.1| (NC_003210) similar to unknown proteins [Lister... 90 6e-18 ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xan... 89 1e-17 ref|NP_471399.1| (NC_003212) similar to unknown proteins [Lister... 88 2e-17 ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pse... 87 3e-17 ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.sub... 87 3e-17 ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Nei... 87 7e-17 gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobac... 86 9e-17 ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria men... 85 2e-16 gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leucon... 84 3e-16 gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytoph... 84 3e-16 gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactob... 84 4e-16 gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitros... 84 5e-16 ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Str... 82 2e-15 gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermo... 82 2e-15 ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oce... 81 4e-15 emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus m... 81 4e-15 ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Str... 80 4e-15 ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus l... 80 5e-15 ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clo... 80 5e-15 ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Str... 80 5e-15 ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sin... 80 7e-15 ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Lep... 80 7e-15 ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Str... 80 7e-15 ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Str... 80 8e-15 ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical pro... 79 8e-15 gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifido... 79 1e-14 gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodob... 79 1e-14 ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Str... 79 1e-14 emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] 79 2e-14 gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenoco... 77 5e-14 ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Str... 77 6e-14 ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Str... 77 6e-14 ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chl... 77 6e-14 gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloro... 76 7e-14 ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium... 76 9e-14 ref|NP_622944.1| (NC_003869) conserved hypothetical protein [The... 76 1e-13 ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaci... 75 2e-13 ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Tre... 75 2e-13 gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodos... 74 3e-13 gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodop... 74 4e-13 gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostr... 73 6e-13 ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase ... 72 1e-12 ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacteri... 72 2e-12 ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycoba... 71 2e-12 ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Myc... 70 5e-12 gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnet... 70 6e-12 ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohe... 70 8e-12 ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Bru... 69 1e-11 ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair... 69 1e-11 ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Myc... 69 2e-11 ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Bru... 66 9e-11 ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Cae... 64 4e-10 gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosp... 64 5e-10 ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Myc... 63 7e-10 ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fus... 63 7e-10 dbj|BAB23527.1| (AK004746) RAD21 homolog (S. pombe)~data source:... 62 1e-09 emb|CAA66939.1| (X98293) HR21spA [Mus musculus] >gi|14193737|gb|... 62 1e-09 ref|NP_033035.1| (NM_009009) RAD21 homolog (S. pombe) [Mus muscu... 62 1e-09 ref|NP_006256.1| (NM_006265) RAD21 homolog; protein involved in ... 62 2e-09 emb|CAA66940.1| (X98294) HR21spA [Homo sapiens] 62 2e-09 gb|AAC26809.1| (AF051786) 14S cohesin RAD21 subunit; member of R... 62 2e-09 ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Cau... 60 4e-09 gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Dr... 60 7e-09 gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila mela... 60 7e-09 ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila mela... 60 7e-09 gb|EAA09166.1| (AAAB01008898) ebiP3994 [Anopheles gambiae str. P... 60 8e-09 gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodos... 60 8e-09 gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanog... 59 1e-08 ref|XP_066618.1| (XM_066618) similar to RAD21 homolog; protein i... 55 1e-07 ref|NP_005123.1| (NM_005132) Rec8p, a meiotic recombination and ... 54 3e-07 gb|AAH04159.1|AAH04159 (BC004159) Rec8p, a meiotic recombination... 54 3e-07 gb|AAD01193.1| (AF006264) recombination and sister chromatid coh... 54 3e-07 gb|AAH19326.1|AAH19326 (BC019326) Unknown (protein for IMAGE:282... 54 3e-07 Sequences not found previously or not previously below threshold: emb|CAC28621.1| (AL031665) dJ545L17.8 (novel protein similar to ... 43 7e-04 >gb|ZP_00041528.1| (NZ_AAAM01000048) hypothetical protein [Xylella fastidiosa Ann-1] Length = 338 Score = 101 bits (253), Expect = 2e-21 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >gb|ZP_00038779.1| (NZ_AAAL01000087) hypothetical protein [Xylella fastidiosa Dixon] Length = 338 Score = 101 bits (253), Expect = 2e-21 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+ F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEGGKFHPFTALFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLATHH 317 >ref|NP_242426.1| (NC_002570) BH1560~unknown conserved protein [Bacillus halodurans] dbj|BAB05279.1| (AP001512) BH1560~unknown conserved protein [Bacillus halodurans] Length = 260 Score = 98.6 bits (245), Expect = 2e-20 Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 2/101 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLFTF 60 + L +++ AYQ++ R + P++ ++ E ++I + + L+ F LF Sbjct: 149 VTLFDMLAAYQKLLKRRAYSRPRTSTVKVEEYSIDERMTDILMDLEKCNGKCRFQDLF-V 207 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + +V FLA+LE+ K I EQ NF DI I R Sbjct: 208 EKGRGHMVVTFLAMLELMKTDAIYCEQNENFADIWIYRREG 248 >ref|NP_390203.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis] sp|P35154|YPUG_BACSU Hypothetical protein ypuG (ORFX7) pir||S45549 conserved hypothetical protein ypuG - Bacillus subtilis gb|AAA67487.1| (L09228) ORFX7 [Bacillus subtilis] emb|CAB14254.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis] Length = 251 Score = 98.6 bits (245), Expect = 2e-20 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD-HFNFFSLFT 59 ++ + ++I A+Q+V R ++N P I ++ I+ ++ LK + NF LF Sbjct: 147 SVTVYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFP 206 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 + + E +V FLA+LE+ K ++ IEQ+ NF DI I + H Sbjct: 207 YEQ-KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH 249 >gb|ZP_00067869.1| (NZ_AAAT01000027) hypothetical protein [Microbulbifer degradans 2-40] Length = 301 Score = 97.4 bits (242), Expect = 3e-20 Identities = 30/98 (30%), Positives = 50/98 (50%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +D+ EL++A V R ++ T + +E + ++ QV +LK + F SLFT S Sbjct: 201 VDMRELMLALSDVLRRADMFTSHH--VEREKLSTRERMAQVLDQLKGRQFVPFVSLFTVS 258 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLAI+E+ K ++ + Q F I++ Sbjct: 259 EGRLGVVVTFLAIMELIKESLLEMVQTEAFGPIHVKAR 296 >ref|NP_299730.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa 9a5c] pir||G82554 conserved hypothetical protein XF2451 [imported] - Xylella fastidiosa (strain 9a5c) gb|AAF85250.1|AE004054_2 (AE004054) conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 338 Score = 97.4 bits (242), Expect = 3e-20 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +++ EL++A Q V R EL + IR+E +++Q + + L+D F +LFT Sbjct: 218 VNMKELLLALQDVLKRAELFSGH--AIRREALSVRQRMGDILAHLEDGKFHPFTTLFTAE 275 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 E V+ FLAILE++K +++I Q+ + I I +H Sbjct: 276 EGKLGVLVTFLAILELAKEQLLDIVQEASLGPIYIKSLAIHH 317 >gb|ZP_00029113.1| (NZ_AAAC01000197) hypothetical protein [Burkholderia fungorum] Length = 291 Score = 97.0 bits (241), Expect = 4e-20 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++ +L A+ V R +L + I +E ++++ + +L++ F LF S Sbjct: 192 VNSEDLRAAWADVIKRAKL--VQHHRISREELSVREHMSSILRQLQNARFIEFSDLFDTS 249 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+ + ++ I Q F I + Sbjct: 250 KGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVR 285 >gb|ZP_00022656.1| (NZ_AAAI01000227) hypothetical protein [Ralstonia metallidurans] Length = 343 Score = 96.6 bits (240), Expect = 5e-20 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +LN + +I +E ++++ Q+ RL+ F LF Sbjct: 240 VETLDLQSAWADVLRRAKLN--QHHKISREELSVREHMSQILRRLQHARFMEFSELFEDA 297 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + + VV +F+A+LE+S+ ++ I Q F I + Sbjct: 298 IRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVR 337 >gb|ZP_00089844.1| (NZ_AAAD01000076) hypothetical protein [Azotobacter vinelandii] Length = 268 Score = 95.9 bits (238), Expect = 1e-19 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++A V R EL ++ +E + ++ +V RL+ F LF Sbjct: 164 VGLDELLLAMAEVLRRAELFESH--QVTREALSTRERMSEVLERLRGGGFVPFVQLFQVG 221 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 222 EGRLGVVVTFMAVLELIKESLVELVQTEPFAPIHVRLR 259 >gb|ZP_00083736.1| (NZ_AABA01000085) hypothetical protein [Pseudomonas fluorescens] Length = 272 Score = 95.5 bits (237), Expect = 1e-19 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VALEEILMSMAEVLRRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFIELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+AILE+ K +I + Q F I++ Sbjct: 233 EGKLGVVVTFMAILELVKESLIELVQNEPFAAIHVRARA 271 >gb|ZP_00127918.1| (NZ_AABH01000012) hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 272 Score = 94.7 bits (235), Expect = 2e-19 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E++++ V +R ++ ++ +E + ++ V RLK F LFT Sbjct: 175 VSLEEVLMSMAEVLHRGDMFESH--QVSREALSTRERMSDVLERLKGGGFVPFAELFTAE 232 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 E VV F+A+LE+ K ++ + Q F I++ Sbjct: 233 EGRLGVVVTFMAVLELVKESLVELVQNEPFAAIHVRARA 271 >ref|NP_372019.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] ref|NP_374609.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] ref|NP_646266.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] dbj|BAB42588.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] dbj|BAB57657.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB95314.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 251 Score = 93.6 bits (232), Expect = 5e-19 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF Sbjct: 147 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 206 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH Sbjct: 207 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 249 >ref|NP_520507.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] emb|CAD16093.1| (AL646069) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 293 Score = 92.4 bits (229), Expect = 1e-18 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF- 60 ++ +L A+ V R +L + +I +E ++++ Q+ RL+ F LF Sbjct: 190 VNADDLRAAWADVLRRAKL--TQHHKISREELSVREHMSQILRRLQHARFMEFTELFDDV 247 Query: 61 ---SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + VV +F+A+LE+S+ ++ I Q + I + Sbjct: 248 IRSGKGAPIVVVNFVAMLELSRESLLEITQAEPYAPIYVR 287 >ref|NP_658098.1| (NC_003995) DUF173, Uncharacterized ACR, COG1354 [Bacillus anthracis A2012] [Bacillus anthracis str. A2012] Length = 247 Score = 91.6 bits (227), Expect = 2e-18 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 + L +++ A+Q++ R + P + I ++ I+Q + +L+ +F+ LF Sbjct: 146 VTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVD 205 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E E +V FLA+LE+ K I IEQ+ NF++I + Sbjct: 206 DE-REIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSY 243 >ref|NP_718583.1| (NC_004347) conserved hypothetical protein [Shewanella oneidensis MR-1] gb|AAN56027.1|AE015738_2 (AE015738) Shewanella oneidensis MR-1 complete genome Length = 262 Score = 91.3 bits (226), Expect = 2e-18 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L E+ A+ V R++ +++E + ++ Q+ + L +D F LF+ Sbjct: 167 VSLFEIARAFGDVLKRIDAYEDHH--VKREQLSTRERMSQILAMLNSEDFTPFERLFSVE 224 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV FLA++E+ K ++ + Q F I + Sbjct: 225 EGRAGVVVTFLALMELVKELLVELYQTEPFSTIYVKAY 262 >ref|NP_637568.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41492.1| (AE012329) conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 279 Score = 90.5 bits (224), Expect = 4e-18 Identities = 33/96 (34%), Positives = 52/96 (53%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +DL E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VDLKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVK 252 >ref|NP_465475.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes EGD-e] emb|CAD00029.1| (AL591981) similar to unknown proteins [Listeria monocytogenes] Length = 249 Score = 89.7 bits (222), Expect = 6e-18 Identities = 27/98 (27%), Positives = 50/98 (50%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSR--LKDKDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I Q + V + L+ F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQ 242 >ref|NP_642633.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37169.1| (AE011869) conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 88.9 bits (220), Expect = 1e-17 Identities = 32/96 (33%), Positives = 52/96 (53%), Gaps = 2/96 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L E+++A V R EL T I++E +++Q V SRL D + F SLFT Sbjct: 159 VELKEMLMALYDVLKRAELFTGH--AIKREALSVRQRMGDVLSRLDDGKFYRFESLFTAE 216 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E V+ FLA+LE++K +++I Q+ I + Sbjct: 217 EGKLGVLVTFLALLELAKEQLLDIVQEAPLAPIYVK 252 >ref|NP_471399.1| (NC_003212) similar to unknown proteins [Listeria innocua] emb|CAC97295.1| (AL596170) similar to unknown proteins [Listeria innocua] Length = 249 Score = 88.2 bits (218), Expect = 2e-17 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD--KDHFNFFSLFT 59 + L +++ A+ ++ R +LN P I + +I V +L F LF Sbjct: 146 VSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELF- 204 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + EQ+V FLA+LE+ K ++ +EQ +F D+ + Sbjct: 205 EEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQ 242 >ref|NP_251888.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa PA01] pir||A83244 conserved hypothetical protein PA3198 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG06586.1|AE004744_1 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PA01] Length = 250 Score = 87.4 bits (216), Expect = 3e-17 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + L EL++ + R +L ++ +E + ++ +V RLK F LFT Sbjct: 135 LALQELMLVMGEMLRRADLFESH--QVTREVLSTRERMSEVLERLKGGAFVPFIQLFTLE 192 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E VV F+AILE+ K ++ + Q F I++ Sbjct: 193 EGKLGVVVTFMAILELVKEQMVELVQNEAFGAIHVRLR 230 >ref|NP_348680.1| (NC_003030) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] gb|AAK80020.1|AE007709_4 (AE007709) Uncharacterized ptotrin, YPUG B.subtilis ortholog [Clostridium acetobutylicum] Length = 249 Score = 87.4 bits (216), Expect = 3e-17 Identities = 24/102 (23%), Positives = 47/102 (45%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKN----RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSL 57 I L ++ ++++ R+ N +I + + I+ ++++ +K F ++ Sbjct: 144 ITLLDMYKLFEKLMEMYRSRINTNNSLPDKIAPDIYKIEDKMDEISEIIKSNKEIYFSNI 203 Query: 58 FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 +VV FLA+LE+ K I + Q NF+DI I R Sbjct: 204 INKCSNKIEVVVTFLALLELIKLKDIKVYQSNNFKDIYIERV 245 >ref|NP_274512.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis MC58] pir||D81075 conserved hypothetical protein NMB1504 [imported] - Neisseria meningitidis (group B strain MD58) gb|AAF41860.1| (AE002500) conserved hypothetical protein [Neisseria meningitidis MC58] Length = 284 Score = 86.6 bits (214), Expect = 7e-17 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + + KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLGILSRAKHTRSHE--VIKETISVRAQMTAILRRLNGHGICRFHDLFNPK 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRI 262 >gb|ZP_00081131.1| (NZ_AAAS01000008) hypothetical protein [Geobacter metallireducens] Length = 324 Score = 85.9 bits (212), Expect = 9e-17 Identities = 27/97 (27%), Positives = 50/97 (50%), Gaps = 2/97 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 ++L ELI A+++V +RV + E+ E+ TI + ++ S L+ K+ F LF Sbjct: 216 VELFELIEAFRKVLDRVSEES--FHEVGAESITIAERINEILSLLEGKESLLFDELFPEH 273 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + ++ FLA+LE+ K ++ + Q + I I Sbjct: 274 FNRDFLIATFLAVLELCKLKMVKVVQANRYGSIWIQP 310 >ref|NP_284420.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491] pir||D81866 hypothetical protein NMA1705 [imported] - Neisseria meningitidis (group A strain Z2491) emb|CAB84933.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491] Length = 284 Score = 84.7 bits (209), Expect = 2e-16 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +T+L A+ + +R + + KET +++ + RL F LF Sbjct: 170 VYITDLTQAWLSILSRAKHTRSHE--VIKETISVRAQMTAILRRLNKHGICRFHDLFNPE 227 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VV +F+A+LE++K G++ I Q+ F +I I Sbjct: 228 QGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRI 262 >gb|ZP_00064299.1| (NZ_AAAO01000066) hypothetical protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 258 Score = 84.3 bits (208), Expect = 3e-16 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL---KDKDHFNFFSLF 58 + L +L A+ ++ R + P + ET+++++A + + D F S F Sbjct: 152 LSLGDLQTAFAQLLRRKKQEKPIRRHVTAETYSLEEAVNNINKHFLQHQTGDMIPFASFF 211 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 E +V FLA+LEM+K + + Q+ ++I + Sbjct: 212 DDIYEREHLVVTFLALLEMAKDKRLKLHQEHQQQEIYVE 250 >gb|ZP_00117780.1| (NZ_AABE01000041) hypothetical protein [Cytophaga hutchinsonii] Length = 262 Score = 84.3 bits (208), Expect = 3e-16 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 2 IDLTELIVAYQRVKNRVELNTP-KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 IDL +L+ +++V R + + + ++I+ E + +++ +F + Sbjct: 149 IDLYKLLKVFEKVIVRWKEEKTKPVHHVVQYPYSIELQKEYIINKVSRGQRISFTEIIND 208 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 V+ +FL+ILE+ I + F + I + H Sbjct: 209 IPVKMAVIYNFLSILELLALQKIQLHLGEGFNNFWIAQYDGEH 251 >gb|ZP_00046510.1| (NZ_AAAB01000007) hypothetical protein [Lactobacillus gasseri] Length = 247 Score = 83.9 bits (207), Expect = 4e-16 Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I EL ++ V R +L P+ +I +I++ T + +L + +FF Sbjct: 145 ITSDELANTFKVVLERFKLRKPQVGQIEVHEASIEEMTTFLKDKLHHRKSTSFFDCIKNF 204 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + ++QV+ FLA+LE+ + I ++Q R+F D+ + + Sbjct: 205 QDLDQVIGLFLAVLELCRDHKILVKQNRDFGDLELEKVET 244 >gb|ZP_00003382.1| (NZ_AAAY01000001) hypothetical protein [Nitrosomonas europaea] Length = 254 Score = 83.6 bits (206), Expect = 5e-16 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I+ +L + + R+ LN IR ET +++ ++ L+ + + F LF+ Sbjct: 153 INPQDLYDTWLALLERLRLNRNH--TIRYETISVRVCMSEILRNLQSRGNVPFTELFSDI 210 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + ++V FLA+LE+++ +++I Q F I + Sbjct: 211 TNVHKLVASFLALLELAREALVDIVQPDRFGMIYV 245 >ref|NP_359283.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] emb|CAC19449.1| (AJ277766) hypothetical protein [Streptococcus pneumoniae] gb|AAL00494.1| (AE008534) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 242 Score = 82.0 bits (202), Expect = 2e-15 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >gb|ZP_00057587.1| (NZ_AAAQ01000029) hypothetical protein [Thermobifida fusca] Length = 274 Score = 81.6 bits (201), Expect = 2e-15 Identities = 18/97 (18%), Positives = 37/97 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 T+ E RV E + I + ++ + V + L++ F L Sbjct: 151 TLGPQEFAALAARVFTPREPPSVPVTHIHQPKTSVAEQAVLVVAELREHGTLTFTELTRA 210 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 ++V FLA+LE+ + ++ +Q ++ I Sbjct: 211 CTDTFEIVARFLALLELYRNAHVSFDQPEPLGELRIT 247 >ref|NP_692749.1| (NC_004193) hypothetical conserved protein [Oceanobacillus iheyensis] dbj|BAC13784.1| (AP004599) hypothetical conserved protein [Oceanobacillus iheyensis] Length = 249 Score = 80.9 bits (199), Expect = 4e-15 Identities = 20/99 (20%), Positives = 44/99 (44%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 I + +++ A + + R E P +++ I+ ++V +++ F S Sbjct: 148 ISIFDMVGALKNMLKRKEWTEPHDTTVQRMDIPIETRMKEVLQQVQSNSDGLVFDKLFPS 207 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V F+A+LE+ K I Q+R+FE++ + Sbjct: 208 PTKNYIVVTFVAVLELMKDKQIYAVQERHFEELYLYSME 246 >emb|CAC19444.1| (AJ277490) hypothetical protein [Streptococcus mitis] Length = 242 Score = 80.9 bits (199), Expect = 4e-15 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLTGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_346308.1| (NC_003028) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gb|AAK75948.1| (AE007478) conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 242 Score = 80.5 bits (198), Expect = 4e-15 Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPK-SVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L + + + + + + I ++ + I+ V L +D LF + Sbjct: 136 TTIDLFLTFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +++V+T FLA LE+ K + + Q+ +F DI + Sbjct: 196 QNVQEVITLFLATLELIKTQELILVQEESFGDIYL 230 >ref|NP_267433.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] gb|AAK05375.1|AE006360_4 (AE006360) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 242 Score = 80.5 bits (198), Expect = 5e-15 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKN-RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 +L +A+ ++ + + ++ +I E FTI ++++R ++ F LF+ S Sbjct: 141 SALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSS 200 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 +++VT F+A+LE+ K I+ Q F +I + R Sbjct: 201 TNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET 240 >ref|NP_562721.1| (NC_003366) conserved hypothetical protein [Clostridium perfringens] dbj|BAB81511.1| (AP003191) conserved hypothetical protein [Clostridium perfringens str. 13] Length = 248 Score = 80.5 bits (198), Expect = 5e-15 Identities = 21/101 (20%), Positives = 39/101 (37%), Gaps = 3/101 (2%) Query: 2 IDLTELIVAYQRVKN---RVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLF 58 I + +L Y + + +I + + I + +L +K F Sbjct: 144 ITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFI 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E +VV F+A+LE+ K I + Q NF +I + + Sbjct: 204 PQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIMMEKV 244 >ref|NP_664071.1| (NC_004070) conserved hypothetical protein [Streptococcus pyogenes MGAS315] gb|AAM78874.1| (AE014141) conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 234 Score = 80.1 bits (197), Expect = 5e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 231 >ref|NP_385632.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] emb|CAC46105.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 288 Score = 79.7 bits (196), Expect = 7e-15 Identities = 21/106 (19%), Positives = 41/106 (37%), Gaps = 8/106 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 L +L+ AY ++ R + + ++ +++ A + + D Sbjct: 170 ASLYDLLTAYATLRQRQAI--TQVTIEKRHVWSLGDARLILARMVGSLDDWTALDHFLIR 227 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 + E + + F A LEM + G + I Q+ F I + RG N Sbjct: 228 YMTSPKERATAIASSFAASLEMVREGRLEIRQEGAFTPIYLRRGPN 273 >ref|NP_711435.1| (NC_004342) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN48453.1|AE011307_6 (AE011307) conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 261 Score = 79.7 bits (196), Expect = 7e-15 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRK-ETFTIQQATEQVTSRLKDKDHFNFFSLF-T 59 + L +LI A+ + + + FT+++ E++ L++K +F LF Sbjct: 149 VSLLDLISAFHEILESQSVEAEIPTLLTAPHRFTVEEKMEKILFTLREKKEISFPELFER 208 Query: 60 FSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++V FLA+LE+SK I+ +Q + F +I + + Sbjct: 209 EKPEKAEIVATFLALLELSKQRILRAKQHKLFGEIRLFLVEGH 251 >ref|NP_268690.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS] gb|AAK33411.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 233 Score = 79.7 bits (196), Expect = 7e-15 Identities = 19/97 (19%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ ++F Sbjct: 134 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVIRLSAIFEEC 193 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 194 QTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRK 230 >ref|NP_606660.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gb|AAL97159.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 234 Score = 79.7 bits (196), Expect = 8e-15 Identities = 19/97 (19%), Positives = 48/97 (48%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L +A+ + + + I ++ + I+ + RL+ ++ + ++F Sbjct: 135 TVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEKENVISLSAIFEEC 194 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + + +V++ FLA LE+ K ++ +EQ NF I + + Sbjct: 195 QTLNEVISIFLASLELIKLHVVFVEQFSNFGAIILRK 231 >ref|NP_696536.1| (NC_004307) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gb|AAN25172.1|AE014767_3 (AE014767) narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] Length = 304 Score = 79.3 bits (195), Expect = 8e-15 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00120635.1| (NZ_AABF01000003) hypothetical protein [Bifidobacterium longum DJO10A] Length = 304 Score = 79.3 bits (195), Expect = 1e-14 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRL------KDKDHFNF 54 T+ EL +V + ++ ++ + V RL K +F Sbjct: 182 TLTPLELAQLAAQVIANAPASEVSIHQLHVPLVDLRAQSLVVRDRLIAALESKGDQSMSF 241 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 L +VV F+A+L K G++ +Q F ++++ Sbjct: 242 SELTRDCTSRIEVVARFMAVLVFFKQGVLQYQQDGPFAELHLR 284 >gb|ZP_00004407.1| (NZ_AAAE01000050) hypothetical protein [Rhodobacter sphaeroides] Length = 264 Score = 78.9 bits (194), Expect = 1e-14 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLFT 59 T L +L+ AY R+ R + V R FT++QA +++ L D S Sbjct: 158 TATLIDLMRAYARI--RTKDEFRPFVMDRHHVFTMEQALDRMRGMLGWFGDWAELTSYLP 215 Query: 60 FS------EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVN 101 HF A+LEM+K G I + Q F I I R Sbjct: 216 EGWDGHPMRRRSATAAHFAAVLEMTKRGQIELRQGETFAPILIRRREG 263 >ref|NP_688586.1| (NC_004116) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gb|AAN00459.1|AE014264_14 (AE014264) conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 235 Score = 78.9 bits (194), Expect = 1e-14 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >emb|CAD47303.1| (AL766852) unknown [Streptococcus agalactiae] Length = 235 Score = 78.5 bits (193), Expect = 2e-14 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + +L + + ++ + + + I KE + I+ + K +F Sbjct: 136 SVMDLFLTFSQMMSQKQKELSNSQTVIEKEDYRIEDMMIVIERHFNLKKKTTLQEVFADC 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 + +++T FLA+LE+ K I +EQ NF + + + Sbjct: 196 QTKSEMITLFLAMLELIKLHQITVEQDSNFSQVILRKEE 234 >gb|ZP_00070137.1| (NZ_AAAZ01000010) hypothetical protein [Oenococcus oeni MCW] Length = 247 Score = 77.0 bits (189), Expect = 5e-14 Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 4/102 (3%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLF 58 + L +L A+ + NR + PK I +E F++ ++ + K F LF Sbjct: 144 VTLQDLQKAFLEIANRQKDLHPKKRTIERENFSVADKINEIKTFFGQKKLDSKIEFQYLF 203 Query: 59 TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 S ++++T FLAILE++K I + Q + I + +G Sbjct: 204 KLSSSNDEMITTFLAILELAKDHFILLSQNDE-QQIFLTKGE 244 >ref|NP_722042.1| (NC_004350) conserved hypothetical protein [Streptococcus mutans UA159] gb|AAN59348.1|AE015000_6 (AE015000) conserved hypothetical protein [Streptococcus mutans UA159] Length = 235 Score = 76.6 bits (188), Expect = 6e-14 Identities = 20/97 (20%), Positives = 47/97 (47%), Gaps = 1/97 (1%) Query: 3 DLTELIVAYQRVK-NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFS 61 + ++ +A+ +V + E I+ + + I+ V ++ + N F + Sbjct: 136 TVLDVFLAFSKVMAEKQEEIKNSHTTIKSDDYRIEDIMTVVEEQVIRQKETNLSWFFKRA 195 Query: 62 EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + +++T FLA LE+ K + ++Q+ NF+DI + + Sbjct: 196 GSLNEIITIFLAALELIKVHRVYVKQEHNFDDIILRK 232 >ref|NP_626041.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor A3(2)] pir||T36873 hypothetical protein SCI51.10c - Streptomyces coelicolor emb|CAB52834.1| (AL939110) conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 264 Score = 76.6 bits (188), Expect = 6e-14 Identities = 19/97 (19%), Positives = 37/97 (37%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 +I + I ++Q+ V +RLK+ +F L Sbjct: 139 SIGPEGFAKLAVKAMQPKPRPQVYVEHIHAPLVSVQEQAGIVVARLKELGEASFRVLVQD 198 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +E VV FLA+LE+ + + ++Q+ D+ + Sbjct: 199 TEDTLTVVARFLALLELYREKAVELDQETALGDLLVR 235 >ref|NP_661042.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS] gb|AAM71384.1| (AE012792) conserved hypothetical protein [Chlorobium tepidum TLS] Length = 242 Score = 76.6 bits (188), Expect = 6e-14 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 L L++AYQ V + + ++ + T+++ + + +RL ++ +F SLF Sbjct: 144 TLYHLMLAYQSVLD--NMPKVRTQNVTDAPVTVEEQSALIMARLGERLQVSFTSLFQEFR 201 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +V FLA+LE+ + I++ + D I + Sbjct: 202 EAIVIVVTFLAVLELCRNRKISVIVKEGVNDFWISQRD 239 >gb|ZP_00017702.1| (NZ_AAAH01000167) hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 76.2 bits (187), Expect = 7e-14 Identities = 26/96 (27%), Positives = 45/96 (46%) Query: 4 LTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEP 63 +T+L+ A +R + + T+ + E++ +RL+ F+F L + Sbjct: 139 ITDLLHALERRRQLQLPLAQPEPIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPT 198 Query: 64 IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 E+V+ F A+LE+ K I +EQ F I I RG Sbjct: 199 TEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRG 234 >ref|NP_102754.1| (NC_002678) hypothetical protein [Mesorhizobium loti] dbj|BAB48540.1| (AP002996) hypothetical protein [Mesorhizobium loti] Length = 285 Score = 75.8 bits (186), Expect = 9e-14 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF- 58 + L +L+ AY + R + R+ ++++ A + +T + +D S Sbjct: 171 SASLYDLLTAYAQ--QRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLI 228 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 + E + + F A LE+ + +++ Q F I + Sbjct: 229 RYMTSPEERRTAIASSFAATLELVRERKMDLRQDEVFAPIYLR 271 >ref|NP_622944.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter tengcongensis] gb|AAM24548.1| (AE013093) conserved hypothetical protein [Thermoanaerobacter tengcongensis] Length = 247 Score = 75.8 bits (186), Expect = 1e-13 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +++ Y+++ R + K I+KE +T+ +++ + L K F + S Sbjct: 139 SVEDIVNVYRKILERNKEKENKIE-IKKEEYTVVSKIKELLTYLVKKPALWFSEIVRKSR 197 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINII 97 +VV F+A+LE+ K + EQQ + DI I Sbjct: 198 SKLEVVVSFVALLELIKLNRVAAEQQTAYGDIFIR 232 >ref|NP_354696.1| (NC_003062) AGR_C_3139p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)] ref|NP_532392.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gb|AAK87481.1| (AE008092) AGR_C_3139p [Agrobacterium tumefaciens str. C58 (Cereon)] gb|AAL42708.1| (AE009127) conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 281 Score = 75.1 bits (184), Expect = 2e-13 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSLF-- 58 +L +L+ AY ++ R + + +++ +++ +A E + S L D + Sbjct: 165 ANLYDLLSAYANLRQRQAI--TQVTIEKRQVWSLVEARELLNSLLGDVGEWTVLDQYLLQ 222 Query: 59 ---TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + + + F A LE+ + G + I Q+ F+ I + RG Sbjct: 223 YVPDPAMRVTAIASAFAASLELVREGSLQIRQEGAFQPIYMRRG 266 >ref|NP_219128.1| (NC_000919) conserved hypothetical protein [Treponema pallidum] pir||H71292 conserved hypothetical protein TP0691 - syphilis spirochete gb|AAC65659.1| (AE001243) conserved hypothetical protein [Treponema pallidum] Length = 252 Score = 75.1 bits (184), Expect = 2e-13 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 D+ +L++ + R+ + TP+ + E ++ + ++ L + F L Sbjct: 149 DVRDLLMLFIRLVRK----TPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIK-QP 203 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 VV F+AILE +K +++I Q F I + Sbjct: 204 SRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYARE 241 >gb|ZP_00016048.1| (NZ_AAAG01000012) hypothetical protein [Rhodospirillum rubrum] Length = 236 Score = 74.3 bits (182), Expect = 3e-13 Identities = 22/107 (20%), Positives = 44/107 (40%), Gaps = 10/107 (9%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKD-KDHFNFFSLFT 59 L +L+ AY +V R+ L P + I T ++++ A ++ + L D + Sbjct: 123 AGLYDLLRAYGKV--RLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLP 180 Query: 60 FSE-----PIEQVVTHFLAILEMSKAGIINIEQQRN-FEDINIIRGV 100 V F+A LE++K G++++ Q + I + Sbjct: 181 PGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDGGVYAPITVRPVA 227 >gb|ZP_00012384.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris] Length = 342 Score = 73.9 bits (181), Expect = 4e-13 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLK-DKDHFNFFSLF- 58 T L +L+ AY + L T ++ +++ +A + + +D Sbjct: 223 TATLYDLLSAYASQRQSRVLTTVHLA--KRTVWSLSEARASLERLVGLAEDWSRLDEYLL 280 Query: 59 ----TFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 ++ + + F A LE+ + G + + Q + + Sbjct: 281 RYMPDPTQRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRP 326 >gb|ZP_00061108.1| (NZ_AAAJ01000033) hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 261 Score = 73.2 bits (179), Expect = 6e-13 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 2 IDLTELIVAYQRVKNR--VELNTP---KSVEIRKETFTIQQATEQVTSRLKDKDHFNFFS 56 + EL Y + R ++N + ++ E T++ + L K F F Sbjct: 141 LSYDELKRVYVELIERNERKMNKNTGKMTQIVQHEKVTLRSKIRDIIRTLLKKPIFKFSE 200 Query: 57 LFTFSEP-IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 LF+ ++VT FLAILE++K I + Q + F DI + + Sbjct: 201 LFSPKTRSRLEIVTGFLAILELAKLKKITLIQPKPFADITVCKCE 245 >ref|NP_109988.1| (NC_000912) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] sp|P75478|Y213_MYCPN Hypothetical protein MG213 homolog (H10_orf506) pir||S73862 dihyrofolate reductase homolog H10_orf506 - Mycoplasma pneumoniae (strain ATCC 29342) gb|AAB96184.1| (AE000052) bidomainal:Dihydrofolate Reductase and C-terminal domain is conserved hypo-thetical [Mycoplasma pneumoniae] Length = 506 Score = 72.4 bits (177), Expect = 1e-12 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 + + +L A ++ R + I + +I+Q ++ + +K + + Sbjct: 312 VSVLKLHHAMNKLMQRWRAQFLANKNISIQELSIEQVQAEILATIKQFGYHSVSLKRVLL 371 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + +T F+A+L + II+IEQ +++ I Sbjct: 372 KVNHHISLMYFITAFVALLVLINNQIIDIEQTSFDDELYI 411 >ref|NP_600640.2| (NC_003450) hypothetical protein [Corynebacterium glutamicum ATCC 13032] dbj|BAB98815.1| (AP005278) Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] Length = 255 Score = 71.6 bits (175), Expect = 2e-12 Identities = 18/102 (17%), Positives = 41/102 (39%), Gaps = 7/102 (6%) Query: 2 IDLTELIVAYQR----VKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNF 54 + L + ++ V T K+ + + ++ + ++ + LK + +F Sbjct: 136 VSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPEQAGRILNTLKLAGIDHYLSF 195 Query: 55 FSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 L +V+ FLA+LE+ KA I Q+ ++ + Sbjct: 196 QLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKV 237 >ref|NP_216225.1| (NC_000962) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] ref|NP_336206.1| (NC_002755) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] pir||D70504 hypothetical protein Rv1709 - Mycobacterium tuberculosis (strain H37RV) emb|CAB10966.1| (Z98268) hypothetical protein Rv1709 [Mycobacterium tuberculosis H37Rv] gb|AAK46020.1| (AE007037) conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 278 Score = 71.2 bits (174), Expect = 2e-12 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 T + + + ++ + E + + LK + +F L ++V F Sbjct: 177 LTPRPAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRF 236 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + + EQ + + Sbjct: 237 LALLELYRTRAVAFEQSEPLGALQV 261 >ref|NP_325946.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis] emb|CAC13288.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis] Length = 249 Score = 70.5 bits (172), Expect = 5e-12 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSE 62 + +L++ +++ R + +I T + + + F +F+ Sbjct: 149 SMVQLVLTLRQMFERTFAEKLRRTKIDNFNLTPSDQVLYIKKLFNENEIVTFEMIFSL-P 207 Query: 63 PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 + V +A+L++S+ + I Q + F I I +G NY Sbjct: 208 SLSHFVITLIALLDLSRRQELLIYQDQQFGTIRIEKGPNY 247 >gb|ZP_00054139.1| (NZ_AAAP01003810) hypothetical protein [Magnetospirillum magnetotacticum] Length = 272 Score = 70.1 bits (171), Expect = 6e-12 Identities = 21/111 (18%), Positives = 46/111 (40%), Gaps = 13/111 (11%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRLKDK---DHFNFFSL 57 +DL +L+ AY R N+ +++ + ++++ A ++ + L D + Sbjct: 161 LDLYDLLKAYADHVVR---NSVRTLTVEAPDLWSVENALARLEAMLGIGGLPDWSVLMAY 217 Query: 58 FTFSEP-----IEQVVTHFLAILEMSKAGIINIEQQR-NFEDINIIRGVNY 102 E + + F+A LE++K G + + Q + I I G+ Sbjct: 218 LPAIEGDSLKMKSAMASTFVAALELAKQGKLVLRQDGAAYSPIYIRAGLGE 268 >ref|NP_064386.1| (NM_020002) meiotic cohesion Rec8; meiotic cohesin REC8 [Mus musculus] gb|AAF69524.1|AF262055_1 (AF262055) meiotic cohesin REC8 [Mus musculus] Length = 591 Score = 69.7 bits (170), Expect = 8e-12 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 2/85 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 EL + + + V +L+ +F SL S F +L + Sbjct: 507 ELPEVPMEMPPRPELSSEAVLRAVALKLQANKELDFSSLVPPLSPRKLASRV-FYLLLVL 565 Query: 78 SKAGIINIEQQRNFEDINIIRGVNY 102 S I+ +EQQ+ + + I G + Sbjct: 566 STQKILLVEQQKPYGPLLIRPGPKF 590 >ref|NP_540003.1| (NC_003317) Hypothetical Cytosolic Protein [Brucella melitensis] gb|AAL52267.1| (AE009548) Hypothetical Cytosolic Protein [Brucella melitensis] Length = 283 Score = 69.3 bits (169), Expect = 1e-11 Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY + R ++ + ++ +++++A + + D + Sbjct: 169 SATLYDLLSAYASQRQRQAVSQVQIE--KRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 226 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 227 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 270 >ref|NP_509262.1| (NM_076861) S. pombe double-strand-break repair protein, RAD21 [Caenorhabditis elegans] pir||T16582 hypothetical protein K08A8.3 - Caenorhabditis elegans gb|AAA79748.1| (U38377) C. elegans COH-1 protein (corresponding sequence K08A8.3) [Caenorhabditis elegans] Length = 652 Score = 68.9 bits (168), Expect = 1e-11 Identities = 13/91 (14%), Positives = 32/91 (34%), Gaps = 3/91 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATE--QVTSRLK-DKDHFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + + ++L+ + + F Sbjct: 557 RKKRDEEKEEPETDEDNRWSKRTHALLQNIATKLENQNGQVELDEMLKKGTSRKVAAAKF 616 Query: 72 LAILEMSKAGIINIEQQRNFEDINIIRGVNY 102 ++L + K I+IEQ+ + DI I G N Sbjct: 617 YSLLCLKKNQCIDIEQKEPYGDIMIKAGPNI 647 >ref|NP_301976.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae] pir||S72957 hypothetical protein - Mycobacterium leprae gb|AAA50910.1| (U00021) unknown [Mycobacterium leprae] emb|CAB08281.1| (Z95117) hypothetical protein MLC1351.05c [Mycobacterium leprae] emb|CAC31749.1| (AL583921) conserved hypothetical protein [Mycobacterium leprae] Length = 268 Score = 68.5 bits (167), Expect = 2e-11 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 15 KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKD---HFNFFSLFTFSEPIEQVVTHF 71 + + + + ++ + +++ + L+ + +F L +VV F Sbjct: 165 FTPRPVPIVATGHLHELKISVPEQAKRLLAMLEARGNGQWTSFSELVADCREPIEVVGCF 224 Query: 72 LAILEMSKAGIINIEQQRNFEDINI 96 LA+LE+ + I EQ + + Sbjct: 225 LALLELYRTRAIAFEQAEPLGVLQV 249 >ref|NP_697893.1| (NC_004310) conserved hypothetical protein [Brucella suis 1330] gb|AAN29808.1|AE014391_3 (AE014391) conserved hypothetical protein [Brucella suis 1330] Length = 245 Score = 66.2 bits (161), Expect = 9e-11 Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKD-KDHFNFFSL-- 57 + L +L+ AY + R ++ + ++ +++++A + + D + Sbjct: 131 SATLYDLLSAYASQRQRQAVSQVQIE--KRSVWSLKEARTALVRLMGAVGDWVSLDRFLI 188 Query: 58 ---FTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 + E + + F A LE+ + G + + Q FE I + Sbjct: 189 DYALSPQERASALASSFAACLELVREGKLEVRQNAPFEPIYMRA 232 >ref|NP_494836.1| (NM_062435) DNA double-strand break repair [Caenorhabditis elegans] gb|AAA81127.1| (U40029) C. elegans COH-2 protein (corresponding sequence F10G7.4) [Caenorhabditis elegans] Length = 645 Score = 63.9 bits (155), Expect = 4e-10 Identities = 13/64 (20%), Positives = 35/64 (54%) Query: 39 TEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIR 98 ++V++ ++ +F S+ ++ +Q F ++L ++K+ I+++Q + +I I Sbjct: 552 LKKVSADIETSGQADFSSVTATAKNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRP 611 Query: 99 GVNY 102 G N+ Sbjct: 612 GANF 615 >gb|ZP_00094099.1| (NZ_AAAV01000112) hypothetical protein [Novosphingobium aromaticivorans] Length = 265 Score = 63.5 bits (154), Expect = 5e-10 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 9/103 (8%) Query: 3 DLTELIVAYQRVKNRVELNTPKSVEI-RKETFTIQQATEQVTSRLK-DKDHFNFFSLFTF 60 D+ LI AY +K+R N P + + T+ A +V+ L D + + Sbjct: 164 DIFSLIQAYGAIKHR---NRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPL 220 Query: 61 SE----PIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRG 99 + + FLA LE++K G I Q++ F + + Sbjct: 221 EADPMLRKSALASSFLAALELAKQGRAEIAQEQTFGPLMLRAV 263 >ref|NP_072878.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium] sp|P47455|Y213_MYCGE Hypothetical protein MG213 pir||E64223 hypothetical protein homolog MG213 - Mycoplasma genitalium gb|AAC71432.1| (U39701) conserved hypothetical protein [Mycoplasma genitalium] Length = 471 Score = 63.1 bits (153), Expect = 7e-10 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 2 IDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFF-----S 56 I + +L A ++ + + I + +++Q +++ +K ++ Sbjct: 300 ISVLKLFHAMNKLLEMRLSSLLTNKNITIKELSVEQVQKELVLAIKQFNYQTVSLKRVLL 359 Query: 57 LFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINI 96 + VT F+A+L + +I +EQ+ ++ I Sbjct: 360 KLNHPISLMYFVTAFVALLVLLNNQVIGLEQKDYHSELYI 399 >ref|NP_603605.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94904.1| (AE010581) Hypothetical cytosolic protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 63.1 bits (153), Expect = 7e-10 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 1 TIDLTELIVAYQRVKNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF 60 ++ ++ Y++ + V+++ + + K+ + I++ + + ++ K LF Sbjct: 135 SLTTDDIFEVYKKYFDSVDISEVMELNLMKQ-YDIKEVMDNILMKVYFKKW-PIDDLFLE 192 Query: 61 SEPIEQVVTHFLAILEMSKAGIINIEQQR 89 +E ++ FLAILE+ K INI+ Sbjct: 193 AENKLHLIYIFLAILELYKDAKINIDNGE 221 >dbj|BAB23527.1| (AK004746) RAD21 homolog (S. pombe)~data source:MGD, source key:MGI:108016, evidence:ISS~putative [Mus musculus] Length = 635 Score = 62.0 bits (150), Expect = 1e-09 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R K SL +Q F + L + K I + Q+ + DI Sbjct: 565 QQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDI 624 Query: 95 NIIRGVNYH 103 G +H Sbjct: 625 IATPGPRFH 633 >emb|CAA66939.1| (X98293) HR21spA [Mus musculus] gb|AAK56113.1|AF332085_1 (AF332085) Rad21 [Mus musculus] gb|AAK56114.1|AF332086_1 (AF332086) Rad21 [Mus musculus] Length = 635 Score = 62.0 bits (150), Expect = 1e-09 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R K SL +Q F + L + K I + Q+ + DI Sbjct: 565 QQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDI 624 Query: 95 NIIRGVNYH 103 G +H Sbjct: 625 IATPGPRFH 633 >ref|NP_033035.1| (NM_009009) RAD21 homolog (S. pombe) [Mus musculus] pir||JC4248 calcium binding PW29 protein - mouse dbj|BAA08408.1| (D49429) PW29 [Mus musculus] Length = 634 Score = 62.0 bits (150), Expect = 1e-09 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R K SL +Q F + L + K I + Q+ + DI Sbjct: 564 QQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDI 623 Query: 95 NIIRGVNYH 103 G +H Sbjct: 624 IATPGPRFH 632 >ref|NP_006256.1| (NM_006265) RAD21 homolog; protein involved in DNA double-strand break repair; nuclear matrix protein 1 [Homo sapiens] dbj|BAA07554.1| (D38551) The ha1237 gene product is related to S.pombe rad21 gene product. [Homo sapiens] Length = 631 Score = 62.0 bits (150), Expect = 2e-09 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R K SL +Q F + L + K I + Q+ + DI Sbjct: 561 QQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDI 620 Query: 95 NIIRGVNYH 103 G +H Sbjct: 621 IATPGPRFH 629 >emb|CAA66940.1| (X98294) HR21spA [Homo sapiens] Length = 631 Score = 62.0 bits (150), Expect = 2e-09 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R K SL +Q F + L + K I + Q+ + DI Sbjct: 561 QQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDI 620 Query: 95 NIIRGVNYH 103 G +H Sbjct: 621 IATPGPRFH 629 >gb|AAC26809.1| (AF051786) 14S cohesin RAD21 subunit; member of RAD21/SCC1/MCD1 family [Xenopus laevis] Length = 629 Score = 61.6 bits (149), Expect = 2e-09 Identities = 15/69 (21%), Positives = 23/69 (32%), Gaps = 2/69 (2%) Query: 37 QATEQVTSRLKDKDHFNFFSLFTFS--EPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI 94 Q R+ K SL +Q F + L + K I + Q+ + DI Sbjct: 559 QQMLHGLQRVLAKTGAESISLLDLCRNTNRKQAAAKFYSFLVLKKQQAIELTQREPYSDI 618 Query: 95 NIIRGVNYH 103 G +H Sbjct: 619 VATPGPRFH 627 >ref|NP_420812.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus CB15] gb|AAK23980.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus CB15] Length = 274 Score = 60.4 bits (146), Expect = 4e-09 Identities = 18/106 (16%), Positives = 39/106 (35%), Gaps = 11/106 (10%) Query: 6 ELIVAYQRVKNRVELNTPKSVEIRKET-FTIQQATEQVTSRL-KDKDHFNFFSLFTFSEP 63 +L + + + R T + ++ A +++ L K +D S+ Sbjct: 162 DLYGLMSAYITQRKREHSRHYAPRPPTAYPLEDARDRLRGLLPKMEDWTVLTSVAPIDRV 221 Query: 64 IEQ---------VVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 +E+ + + A LE+ K G++ Q F+DI + Sbjct: 222 LEEDDGPSPASYLASTLSASLELVKEGVLEARQLEAFQDIYLRTRA 267 >gb|AAD33593.1|AF132146_1 (AF132146) DNA repair protein Rad21 [Drosophila melanogaster] Length = 715 Score = 59.7 bits (144), Expect = 7e-09 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 NY 102 + Sbjct: 709 TF 710 >gb|AAD04175.1| (AF109926) rad21 mitotic cohesin [Drosophila melanogaster] gb|AAF82099.1|AF267746_1 (AF267746) rad21 mitotic cohesin [Drosophila melanogaster] Length = 715 Score = 59.7 bits (144), Expect = 7e-09 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 NY 102 + Sbjct: 709 TF 710 >ref|NP_652157.1| (NM_143900) Rad21 gene product [Drosophila melanogaster] gb|AAF01417.1|AF186473_1 (AF186473) mitotic cohesin SCC1 [Drosophila melanogaster] Length = 715 Score = 59.7 bits (144), Expect = 7e-09 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 650 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 708 Query: 101 NY 102 + Sbjct: 709 TF 710 >gb|EAA09166.1| (AAAB01008898) ebiP3994 [Anopheles gambiae str. PEST] Length = 727 Score = 59.7 bits (144), Expect = 8e-09 Identities = 18/88 (20%), Positives = 32/88 (35%), Gaps = 6/88 (6%) Query: 20 LNTPKSVEIRKETFTI-----QQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAI 74 I + + Q V SRL DH + +Q F ++ Sbjct: 636 EEQQVDETIEQFEERVLNKRAAQMFLSVKSRLLKADHMMLSEMT-HRNNKKQAAQKFYSL 694 Query: 75 LEMSKAGIINIEQQRNFEDINIIRGVNY 102 L + K + I Q++ ++DI + RG + Sbjct: 695 LVLKKFKALEISQKQPYDDITVTRGPLF 722 >gb|ZP_00016782.1| (NZ_AAAG01000104) hypothetical protein [Rhodospirillum rubrum] Length = 81 Score = 59.7 bits (144), Expect = 8e-09 Identities = 12/72 (16%), Positives = 26/72 (35%), Gaps = 7/72 (9%) Query: 36 QQATEQVTSRLKD-KDHFNFFSLFTFSE-----PIEQVVTHFLAILEMSKAGIINIEQQR 89 + A ++ + L D + V F+A LE++K G++++ Q Sbjct: 1 ENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQDG 60 Query: 90 N-FEDINIIRGV 100 + I + Sbjct: 61 GVYAPITVRPVA 72 >gb|AAF45452.1| (AE002828) Rad21 gene product [Drosophila melanogaster] Length = 677 Score = 59.3 bits (143), Expect = 1e-08 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 41 QVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGV 100 V + KD L + +Q F ++L + K +++I+Q + DI I RG Sbjct: 612 DVRAHFIAKDSLELSQLTS-GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGP 670 Query: 101 NY 102 + Sbjct: 671 TF 672 >ref|XP_066618.1| (XM_066618) similar to RAD21 homolog; protein involved in DNA double-strand break repair; nuclear matrix protein 1 [Homo sapiens] Length = 268 Score = 55.4 bits (133), Expect = 1e-07 Identities = 11/60 (18%), Positives = 24/60 (39%), Gaps = 1/60 (1%) Query: 44 SRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 ++ + + L+ +Q V F + L + K I + Q+ + +I G +H Sbjct: 208 QQMLHAESISLLELYQN-TNRKQTVAKFYSFLVLKKQQAIELTQEELYSNIIATPGPKFH 266 >ref|NP_005123.1| (NM_005132) Rec8p, a meiotic recombination and sister chromatid cohesion phosphoprotein of the rad21p family [Homo sapiens] dbj|BAA91690.1| (AK001435) unnamed protein product [Homo sapiens] Length = 547 Score = 54.3 bits (130), Expect = 3e-07 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 463 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 521 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 522 SAQQILHVKQEKPYGRLLIQPGPRFH 547 >gb|AAH04159.1|AAH04159 (BC004159) Rec8p, a meiotic recombination and sister chromatid cohesion phosphoprotein of the rad21p family [Homo sapiens] Length = 547 Score = 54.3 bits (130), Expect = 3e-07 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 463 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 521 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 522 SAQQILHVKQEKPYGRLLIQPGPRFH 547 >gb|AAD01193.1| (AF006264) recombination and sister chromatid cohesion protein homolog [Homo sapiens] gb|AAH10887.1|AAH10887 (BC010887) Similar to Rec8p, a meiotic recombination and sister chromatid cohesion phosphoprotein of the rad21p family [Homo sapiens] Length = 547 Score = 54.3 bits (130), Expect = 3e-07 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 463 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 521 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 522 SAQQILHVKQEKPYGRLLIQPGPRFH 547 >gb|AAH19326.1|AAH19326 (BC019326) Unknown (protein for IMAGE:2823630) [Homo sapiens] Length = 362 Score = 54.3 bits (130), Expect = 3e-07 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 ELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTF-SEPIEQVVTHFLAILEM 77 + P + E +++ V L+ +F SL + S F +L + Sbjct: 278 PMEMPLVLPPELELLSLEAVHRAVALELQANREPDFSSLVSPLSPRRMAARV-FYLLLVL 336 Query: 78 SKAGIINIEQQRNFEDINIIRGVNYH 103 S I++++Q++ + + I G +H Sbjct: 337 SAQQILHVKQEKPYGRLLIQPGPRFH 362 >emb|CAC28621.1| (AL031665) dJ545L17.8 (novel protein similar to RAD21 (S. pombe) homolog (KIAA0078)) [Homo sapiens] Length = 54 Score = 43.1 bits (101), Expect = 7e-04 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 2/50 (4%) Query: 56 SLFTFSEP--IEQVVTHFLAILEMSKAGIINIEQQRNFEDINIIRGVNYH 103 SL +Q F + L + K I + Q + DI G ++ Sbjct: 3 SLMKLCRNSDRKQAAAKFYSFLVLKKQLAIELSQSAPYADIIATMGPMFY 52 Database: nr Posted date: Nov 6, 2002 1:25 PM Number of letters in database: 388,937,031 Number of sequences in database: 1,220,597 Lambda K H 0.318 0.178 0.458 Lambda K H 0.267 0.0544 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 956,635,583 Number of Sequences: 1220597 Number of extensions: 42509332 Number of successful extensions: 123867 Number of sequences better than 1.0e-03: 784 Number of HSP's better than 0.0 without gapping: 641 Number of HSP's successfully gapped in prelim test: 152 Number of HSP's that attempted gapping in prelim test: 122613 Number of HSP's gapped (non-prelim): 819 length of query: 103 length of database: 388,937,031 effective HSP length: 79 effective length of query: 24 effective length of database: 292,509,868 effective search space: 7020236832 effective search space used: 7020236832 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 100 (42.7 bits)