ID GAG_HV1Z2 STANDARD; PRT; 500 AA. AC P12495; DT 01-OCT-1989 (Rel. 12, Created) DT 01-FEB-1994 (Rel. 28, Last sequence update) DT 15-JUL-1998 (Rel. 36, Last annotation update) DE GAG POLYPROTEIN [CONTAINS: CORE PROTEINS P17, P24, P2, P7, P1, P6]. GN GAG. OS Human immunodeficiency virus type 1 (Z2/CDC-Z34 isolate) (HIV-1). OC Viruses; Retroid viruses; Retroviridae; Lentivirus. OX NCBI_TaxID=11683; RN [1] RP SEQUENCE FROM N.A. RA Theodore T., Buckler-White A.; RL Submitted (NOV-1988) to the HIV data bank. CC -!- FUNCTION: PERFORMS HIGHLY COMPLEX ORCHESTRATED TASKS DURING THE CC ASSEMBLY, BUDDING, MATURATION, AND INFECTION STAGES OF THE VIRAL CC REPLICATION CYCLE. DURING VIRAL ASSEMBLY, THE PROTEINS FORM CC MEMBRANE ASSOCIATIONS AND SELF-ASSOCIATIONS THAT ULTIMATELY CC RESULT IN BUDDING OF AN IMMATURE VIRION FROM THE INFECTED CELL. CC GAG PRECURSORS ALSO FUNCTION DURING VIRAL ASSEMBLY TO SELECTIVELY CC BIND AND PACKAGE TWO PLUS STRANDS OF GENOMIC RNA. CC -!- PTM: THE P24 PROTEIN IS PHOSPHORYLATED. CC -------------------------------------------------------------------------- CC This SWISS-PROT entry is copyright. It is produced through a collaboration CC between the Swiss Institute of Bioinformatics and the EMBL outstation - CC the European Bioinformatics Institute. There are no restrictions on its CC use by non-profit institutions as long as its content is in no way CC modified and this statement is not removed. Usage by and for commercial CC entities requires a license agreement (See http://www.isb-sib.ch/announce/ CC or send an email to license@isb-sib.ch). CC -------------------------------------------------------------------------- DR EMBL; M22639; AAA45365.1; -. DR HSSP; P05888; 1AAF. DR HIV; M22639; GAG$Z2Z6. DR INTERPRO; IPR000071; -. DR INTERPRO; IPR000721; -. DR INTERPRO; IPR001878; -. DR PFAM; PF00540; gag_p17; 1. DR PFAM; PF00607; gag_p24; 1. DR PFAM; PF00098; zf-CCHC; 2. DR PRINTS; PR00234; HIV1MATRIX. DR PRINTS; PR00939; C2HCZNFINGER. KW AIDS; Core protein; Polyprotein; Myristate; Phosphorylation; KW Zinc-finger. FT INIT_MET 0 0 BY SIMILARITY. FT CHAIN 1 132 CORE PROTEIN P17 (MATRIX PROTEIN). FT CHAIN 133 363 CORE PROTEIN P24 (CORE ANTIGEN). FT CHAIN 364 378 CORE PROTEIN P2. FT CHAIN 379 433 CORE PROTEIN P7 (NUCLEOCAPSID PROTEIN). FT CHAIN 434 449 CORE PROTEIN P1. FT CHAIN 450 500 CORE PROTEIN P6. FT LIPID 1 1 MYRISTATE (BY SIMILARITY). FT ZN_FING 393 406 C2HC-TYPE. SQ SEQUENCE 500 AA; 55546 MW; B27C2609A992FB2A CRC64; GARASVLSGG KLDAWEKIRL RPGGKKKYRL KHLVWASREL ERFALNPGLL ETSDGCKQII GQLQPAIRTG SEELRSLFNT VATLYCVHER IEVKDTKEAL EKMEEEQNKS KNKKAQQAAA DAGNNSQVSQ NYPIVQNLQG QMVHQAISPR TLNAWVKVIE EKAFSPEVIP MFSALSEGAT PQDLNTMLNT VGGHQAAMQM LKETINEEAA EWDRLHPVHA GPIAPGQMRE PRGSDIAGTT STLQEQIAWM TSNPPIPVGE IYKRWIILGL NKIVRMYSPV SILDIRQGPK EPFRDYVDRF YKTLRAEQAS QEVKGWMTET LLVQNANPDC KTILKALGPQ ATLEEMMTAC QGVGGPSHKA RVLAEAMSQA TNSAAAVMMQ RGNFKGPRKT IKCFNCGKEG HIAKNCRAPR RKGCWKCGKE GHQLKDCTER QANFLGKIWP SHKGRPGNFL QSRPEPTAPP AESFGFGEEI TPSQKQEQKD KELYPSTALK SLFGNDPLLQ //