ID   GAG_HV1JR      STANDARD;      PRT;   503 AA.
AC   P20873;
DT   01-FEB-1991 (Rel. 17, Created)
DT   01-FEB-1994 (Rel. 28, Last sequence update)
DT   15-JUL-1998 (Rel. 36, Last annotation update)
DE   GAG POLYPROTEIN [CONTAINS: CORE PROTEINS P17, P24, P2, P7, P1, P6].
GN   GAG.
OS   Human immunodeficiency virus type 1 (JRCSF isolate) (HIV-1).
OC   Viruses; Retroid viruses; Retroviridae; Lentivirus.
OX   NCBI_TaxID=11688;
RN   [1]
RP   SEQUENCE FROM N.A.
RA   Koyanagi S., Chen I.S.Y.;
RL   Submitted (DEC-1988) to the HIV data bank.
CC   -!- FUNCTION: PERFORMS HIGHLY COMPLEX ORCHESTRATED TASKS DURING THE
CC       ASSEMBLY, BUDDING, MATURATION, AND INFECTION STAGES OF THE VIRAL
CC       REPLICATION CYCLE. DURING VIRAL ASSEMBLY, THE PROTEINS FORM
CC       MEMBRANE ASSOCIATIONS AND SELF-ASSOCIATIONS THAT ULTIMATELY
CC       RESULT IN BUDDING OF AN IMMATURE VIRION FROM THE INFECTED CELL.
CC       GAG PRECURSORS ALSO FUNCTION DURING VIRAL ASSEMBLY TO SELECTIVELY
CC       BIND AND PACKAGE TWO PLUS STRANDS OF GENOMIC RNA.
CC   -!- PTM: THE P24 PROTEIN IS PHOSPHORYLATED.
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DR   EMBL; M38429; AAB03744.1; -.
DR   HSSP; P05888; 1AAF.
DR   HIV; M38429; GAG$JRCSF.
DR   INTERPRO; IPR000071; -.
DR   INTERPRO; IPR000721; -.
DR   INTERPRO; IPR001878; -.
DR   PFAM; PF00540; gag_p17; 1.
DR   PFAM; PF00607; gag_p24; 1.
DR   PFAM; PF00098; zf-CCHC; 2.
DR   PRINTS; PR00234; HIV1MATRIX.
DR   PRINTS; PR00939; C2HCZNFINGER.
KW   AIDS; Core protein; Polyprotein; Myristate; Phosphorylation;
KW   Zinc-finger.
FT   INIT_MET      0      0       BY SIMILARITY.
FT   CHAIN         1    131       CORE PROTEIN P17 (MATRIX PROTEIN).
FT   CHAIN       132    362       CORE PROTEIN P24 (CORE ANTIGEN).
FT   CHAIN       363    376       CORE PROTEIN P2.
FT   CHAIN       377    431       CORE PROTEIN P7 (NUCLEOCAPSID PROTEIN).
FT   CHAIN       432    447       CORE PROTEIN P1.
FT   CHAIN       448    503       CORE PROTEIN P6.
FT   LIPID         1      1       MYRISTATE (BY SIMILARITY).
FT   ZN_FING     391    404       C2HC-TYPE.
SQ   SEQUENCE   503 AA;  56352 MW;  F0B0471CC09B42ED CRC64;
     GARASVLSGG ELDRWEKIRL RPGGKKKYRL KHIVWASREL ERFAVNPGLL ESSEGCRQIL
     GQLQPSLKTG SEELTSLYNT VATLYCVHQR IEIKDTKEAL EKIEEEQTKS MKKAQQAAAD
     TGNSSQVSQN YPIVQNLQGQ MVHQAISPRT LNAWVKVIEE KAFSPEVIPM FSALSEGATP
     QDLNTMLNTV GGHQAAMQML KETINEEAAE WDRLHPVHAG PIAPGQMREP RGSDIAGTTS
     TLQEQIGWMT NNPPIPVGEI YKRWIILGLN KIVRMYSPVS ILDIRQGPKE PFRDYVDRFY
     KTLRAEQATQ EVKNWMTETL LVQNANPDCK TILKALGPAA TLEEMMTACQ GVGGPGHKAR
     VLAEAMSQVT NPATIMMQRG NFRNQRKNVK CFNCGKEGHI ARNCRAPRKK GCWKCGKEGH
     QMKECTERQA NFLGKIWPSY KGRPGNFLQS RPEPTAPPEE SFRFGEETAT PSQKQEQKQE
     PIDKELYPLT SLRSLFGNDP SSQ
//