TBLASTN 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 993906608-26928-3090
Query= (434 letters)
Database: preblast_gss 2,521,549 sequences; 1,356,126,437 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|13965731|gb|AZ525157.1|AZ525157 240PbG10 Pb MBN #21 Plas... 248 8e-65 gi|11809786|gb|AZ672640.1|AZ672640 ENTKH66TR Entamoeba hist... 242 4e-63 gi|2320829|gb|AA550577.1|AA550577 1742m3 gmbPfHB3.1, G. Rom... 154 3e-58 gi|13986017|gb|AZ572682.1|AZ572682 308PvG06 Pv MBN #30 Plas... 206 4e-52 gi|11822891|gb|AZ685745.1|AZ685745 ENTHV52TR Entamoeba hist... 198 1e-49 gi|13501514|gb|AZ930605.1|AZ930605 474.dhz56e06.s1 Saccharo... 180 3e-44 gi|5930931|gb|AQ841906.1|AQ841906 T134178 Soybean RFLP prob... 176 3e-43 gi|13968721|gb|AZ526668.1|AZ526668 258PbC10 Pb MBN #21 Plas... 160 2e-38 gi|6055522|gb|AQ850874.1|AQ850874 LMAJFV1_lm42g05.x1 Leishm... 122 7e-27 gi|7804642|emb|AL166863.1|AL166863 C0AG195BB04SP1 G Tetraod... 71 6e-22 gi|9552504|emb|AL319620.1|AL319620 C0AA044CD09C1 A Tetraodo... 74 1e-18 gi|7808855|emb|AL170798.1|AL170798 C0AG201AF03LP1 G Tetraod... 93 2e-18 gi|13847716|gb|AZ976489.1|AZ976489 2M0251K20R Mouse 10kb pl... 92 1e-17 gi|12166121|emb|AL404522.1|AL404522 AL404522 AT0AA Saccharo... 91 2e-17 gi|9371135|gb|AZ051049.2|AZ051049 GSSTc12036 Trypanosoma cr... 85 2e-15 gi|9484559|gb|AZ270942.1|AZ270942 RPCI-23-80E14.TJ RPCI-23 ... 73 5e-12 gi|6801722|gb|AQ971269.1|AQ971269 RPCI-23-332D13.TV RPCI-23... 68 2e-10 gi|11865306|emb|AL490833.1|AL490833 TA301A08P Trypanosoma b... 68 2e-10 gi|3902739|gb|AQ276543.1|AQ276543 CITBI-E1-2523O19.TF CITBI... 68 2e-10 gi|2925957|gb|B84825.1|B84825 RPCI11-28G7.TP RPCI-11 Homo s... 68 2e-10 gi|8889093|gb|AZ124646.1|AZ124646 k153r S. kluyveri genomic... 62 8e-09 gi|2512101|gb|B26135.1|B26135 F4M8TRC IGF Arabidopsis thali... 60 3e-08 gi|11824934|gb|AZ687788.1|AZ687788 ENTLW05TR Entamoeba hist... 60 3e-08 gi|7984395|emb|AL262761.1|AL262761 C0BG062CE11LP1 G Tetraod... 54 4e-06 gi|13847340|gb|AZ976113.1|AZ976113 2M0251K20F Mouse 10kb pl... 54 4e-06 gi|11754859|gb|AZ632669.1|AZ632669 1M0487L20F Mouse 10kb pl... 52 1e-05 gi|2951104|emb|AJ227280.1|AJ227280 AJ227280 Ciona intestina... 51 2e-05 gi|7984396|emb|AL262762.1|AL262762 C0BG062CE11SP1 G Tetraod... 49 9e-05 gi|11827941|gb|AZ690795.1|AZ690795 ENTIW07TR Entamoeba hist... 35 1.1 gi|4411520|gb|AQ406155.1|AQ406155 HS_5047_B2_B07_SP6E RPCI-... 34 2.4 gi|3507873|gb|AQ130707.1|AQ130707 HS_3009_A2_D02_T7 CIT App... 34 3.2 gi|7824334|emb|AL186230.1|AL186230 C0AG245BA05SP1 G Tetraod... 32 9.2 gi|13803053|gb|AZ940973.1|AZ940973 2M0200J03R Mouse 10kb pl... 32 9.2
>gi|13965731|gb|AZ525157.1|AZ525157 240PbG10 Pb MBN #21 Plasmodium berghei genomic 3'. Length = 568 Score = 248 bits (633), Expect = 8e-65 Identities = 116/182 (63%), Positives = 141/182 (76%) Frame = -1 Query: 86 YNLPSVYEWTTCDMNSDDMCSEVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYYQS 145 Y LP Y W CD+N ++ EVYNLL +NYVEDD+N+FRFNYS EFL WAL P Y + Sbjct: 559 YXLPEGYAWYVCDVNDENDRKEVYNLLTDNYVEDDDNIFRFNYSSEFLLWALTSPNYLKE 380 Query: 146 WHIGVRAKTSKKLVAFISGVPARIRVRDEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTR 205 WHIGV+ + KLV+FIS P I + +VVKM E+NFLCVHK LRSKRLAPV+IKEVTR Sbjct: 379 WHIGVKRVDTNKLVSFISAFPTDICINKKVVKMVEVNFLCVHKSLRSKRLAPVLIKEVTR 200 Query: 206 RVHLENIWQAAYTAGVILPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKL 265 R++L+NIWQA YTAGV LP PI+ +Y+HR++N KKLIDVGFS L +R+TMSR IKLYK+ Sbjct: 199 RINLKNIWQAVYTAGVYLPKPISDARYYHRTINVKKLIDVGFSSLNSRLTMSRAIKLYKI 20 Query: 266 PD 267 D Sbjct: 19 DD 14
>gi|11809786|gb|AZ672640.1|AZ672640 ENTKH66TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic. Length = 870 Score = 242 bits (618), Expect = 4e-63 Identities = 126/285 (44%), Positives = 179/285 (62%), Gaps = 2/285 (0%) Frame = -3 Query: 99 MNSDDMCSEVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYYQSWHIGVRAKTSKKL 158 ++++ EVYN +N EDD+ RF+Y K F++W L+ PGYY SW +G+R K S L Sbjct: 868 IDNEKEMEEVYNY*RN-LCEDDDATLRFDYQKNFIKWCLKVPGYYPSWLVGIRQKDSHDL 692 Query: 159 VAFISGVPARIRVRDEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYT 218 + FI GVP+ I++ D +V +AEINFLCV K +R +LAP +IKEVTR+VHL ++QA YT Sbjct: 691 IGFIPGVPSSIKIYDRIVDVAEINFLCVRKDMRKFKLAPQLIKEVTRQVHLTGLFQAVYT 512 Query: 219 AGVILPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDAPITPGFRKME 278 +G LP + T QY+HR LNPKKL +GFS R+T+ R +KLYKLP+ P + GFR+ME Sbjct: 511 SGTELPNVVCTTQYFHRPLNPKKLDAIGFSTCNQRLTLQRALKLYKLPEQPNSIGFRQME 332 Query: 279 PRDVPAVTRLLRNYL-SQFGVATDFDENDVEHWLLPREDVVDSYLVESPETHDVTDFCSF 337 +DV VT L +L + + + F + V H L R+ ++ SY++E + + F +F Sbjct: 331 EKDVDIVTEKLNRFLHTHYDLTVLFSKEMVAHTFLSRDGIIKSYVLE--QNGVIKAFGAF 158 Query: 338 YTLPSTILGNPNYTTLKAAYSYYNVATQ-TSFLQLMNDALIVSKQ 381 Y LPS+IL + Y+ L AY YY + F Q D LI + Q Sbjct: 157 YILPSSILNSYEYSELYIAYQYYYFYDKDVDFKQFFKDILICAVQ 23
>gi|2320829|gb|AA550577.1|AA550577 1742m3 gmbPfHB3.1, G. Roman Reddy Plasmodium falciparum genomic clone 1742m. Length = 777 Score = 154 bits (390), Expect(2) = 3e-58 Identities = 69/118 (58%), Positives = 89/118 (74%) Frame = +3 Query: 84 EPYNLPSVYEWTTCDMNSDDMCSEVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYY 143 E Y LPS Y W CD+ ++ S++YNLL +NYVEDD+N+FRFNYS EFL WAL P Y Sbjct: 243 EEYKLPSGYAWCVCDITKENDRSDIYNLLTDNYVEDDDNVFRFNYSSEFLLWALSSPNYV 422 Query: 144 QSWHIGVRAKTSKKLVAFISGVPARIRVRDEVVKMAEINFLCVHKKLRSKRLAPVMIK 201 ++WHIGV+ +++ KLV FIS +P + V ++KMAE+NFLCVHK LRSKRLAPV+ K Sbjct: 423 KNWHIGVKYESTNKLVGFISAIPIDMCVNKNIIKMAEVNFLCVHKSLRSKRLAPVINK 596
Score = 93.6 bits (231), Expect(2) = 3e-58 Identities = 42/64 (65%), Positives = 55/64 (85%) Frame = +1 Query: 198 VMIKEVTRRVHLENIWQAAYTAGVILPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMS 257 ++IKE+TRR++LE+IWQA YTAGV LP PI+T +Y+HRS+N KKLI++GFS L R+TMS Sbjct: 586 LLIKEITRRINLESIWQAIYTAGVYLPKPISTARYFHRSINVKKLIEIGFSCLNTRLTMS 765 Query: 258 RTIK 261 R IK Sbjct: 766 RAIK 777
>gi|13986017|gb|AZ572682.1|AZ572682 308PvG06 Pv MBN #30 Plasmodium vivax genomic 3'. Length = 672 Score = 206 bits (524), Expect = 4e-52 Identities = 93/148 (62%), Positives = 117/148 (78%) Frame = -3 Query: 106 SEVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYYQSWHIGVRAKTSKKLVAFISGV 165 SE+Y LL +NYVEDD+N+F FNYS EFL WAL P Y ++WHIGV+ S KL+ FIS + Sbjct: 445 SEIYTLLTDNYVEDDDNIFGFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAI 266 Query: 166 PARIRVRDEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVILPT 225 P I + +KMAE+NFLCVHK LRSKRLAPV+IKE+TRR++LENIWQA YTAGV LP Sbjct: 265 PTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPK 86 Query: 226 PITTCQYWHRSLNPKKLIDVGFSRLGAR 253 P++ +Y+HRS+N KKLI++GFS L +R Sbjct: 85 PVSDARYYHRSINVKKLIEIGFSSLNSR 2
>gi|11822891|gb|AZ685745.1|AZ685745 ENTHV52TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic. Length = 890 Score = 198 bits (503), Expect = 1e-49 Identities = 107/253 (42%), Positives = 155/253 (60%), Gaps = 2/253 (0%) Frame = +1 Query: 183 FLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVILPTPITTCQYWHRSLNPKKL 242 F+C + +R +LAP +IKEVTR+VHL ++QA YT+G LP + T QY+HR LNPKKL Sbjct: 88 FVC**RDMRKFKLAPQLIKEVTRQVHLTGLFQAVYTSGTELPNVVCTTQYFHRPLNPKKL 267 Query: 243 IDVGFSRLGARMTMSRTIKLYKLPDAPITPGFRKMEPRDVPAVTRLLRNYL-SQFGVATD 301 +GFS R+T+ R +KLYKLP+ P + GFR+ME +DV VT L +L + + + Sbjct: 268 DAIGFSTCNQRLTLQRALKLYKLPEQPNSIGFRQMEEKDVDIVTEKLNRFLHTHYDLTVL 447 Query: 302 FDENDVEHWLLPREDVVDSYLVESPETHDVTDFCSFYTLPSTILGNPNYTTLKAAYSYYN 361 F + V H L R+ ++ SY++E + + F +FY LPS+IL + Y+ L AY YY Sbjct: 448 FSKEMVAHTFLSRDGIIKSYVLE--QNGVIKAFGAFYILPSSILNSYEYSELYIAYQYYY 621 Query: 362 VATQ-TSFLQLMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRL 420 + F Q D LI + Q DVFN L++ N+ +L +L F PGDG L YYLYN+ Sbjct: 622 FYDKDVDFKQFFKDILICAVQNHCDVFNCLNISENQQYLADLLFVPGDGYLKYYLYNWAC 801 Query: 421 KSALKPAELGLVL 433 ++P +L ++L Sbjct: 802 PK-VEPNKLAIIL 837
>gi|13501514|gb|AZ930605.1|AZ930605 474.dhz56e06.s1 Saccharomyces unisporus NRRL Y-1556 Saccharomyces unisporus genomic clone 474.dhz56e06.s1. Length = 508 Score = 180 bits (456), Expect = 3e-44 Identities = 84/172 (48%), Positives = 114/172 (65%), Gaps = 1/172 (0%) Frame = +1 Query: 50 FWETQPVGQFKDIGDTSLPE-GPIEPATPLSEVKQEPYNLPSVYEWTTCDMNSDDMCSEV 108 FW TQPV DT + E GPI+ ++ EP + +EW D+ ++ ++ Sbjct: 1 FWNTQPVPAL----DTEISEEGPIDSKKTPDDIPDEPLPMLGDFEWCEIDIQKENELEDL 168 Query: 109 YNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYYQSWHIGVRAKTSKKLVAFISGVPAR 168 + LL NYVED ++ FRFNY+KEF WAL+ PG+ + WH+GVR K + KL+AFIS +P Sbjct: 169 FVLLNENYVEDKDSSFRFNYTKEFFNWALKSPGWRKDWHVGVRVKKTNKLIAFISAIPVN 348 Query: 169 IRVRDEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAG 220 +RVR K EINFLC+HK+LR+KRL PV+IKE+TRRV+ NIWQA YT+G Sbjct: 349 LRVRSNEFKSVEINFLCIHKQLRAKRLTPVLIKEITRRVNKCNIWQALYTSG 504
>gi|5930931|gb|AQ841906.1|AQ841906 T134178 Soybean RFLP probe Glycine max genomic clone A656. Length = 641 Score = 176 bits (447), Expect = 3e-43 Identities = 84/100 (84%), Positives = 92/100 (92%) Frame = +1 Query: 335 CSFYTLPSTILGNPNYTTLKAAYSYYNVATQTSFLQLMNDALIVSKQKGFDVFNALDVMH 394 CSFYTLPS+ILGN NY+ LKAAYSYYNV+T+T QLMND LIV+KQK FDVFNALDVMH Sbjct: 7 CSFYTLPSSILGNQNYSILKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMH 186 Query: 395 NESFLKELKFGPGDGQLHYYLYNYRLKSALKPAELGLVLL 434 NESFLKELKFGPGDGQLHYYLYNYR++SALKP+ LGLVLL Sbjct: 187 NESFLKELKFGPGDGQLHYYLYNYRIRSALKPSGLGLVLL 306
>gi|13968721|gb|AZ526668.1|AZ526668 258PbC10 Pb MBN #21 Plasmodium berghei genomic 3'. Length = 620 Score = 160 bits (405), Expect = 2e-38 Identities = 78/139 (56%), Positives = 97/139 (69%), Gaps = 1/139 (0%) Frame = +3 Query: 84 EPYNLPSVYEWTTCDMNSDDMCSEVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYY 143 + Y LP Y W CD+N ++ EVYNLL +NYVEDD+N+FRFNYS EFL WAL P Y Sbjct: 168 DEYKLPEGYAWYVCDVNDENDRKEVYNLLTDNYVEDDDNIFRFNYSSEFLLWALTSPNYL 347 Query: 144 QSWHIGVRAKTSKKLVAFISGVPARIRVRDEVVKMAEINFLCVHKKLRSKRLAPVMIKEV 203 + WHIGV+ + KLV+FIS P I + +VVKM E+NFLCVHK LRSKRLAPV+IKE Sbjct: 348 KEWHIGVKRVDTNKLVSFISAFPTDICINKKVVKMVEVNFLCVHKSLRSKRLAPVLIKEG 527 Query: 204 TRRVHLENIW-QAAYTAGV 221 T + + I+ +A YT V Sbjct: 528 T*KNQFKKIFGKAVYTCWV 584
>gi|6055522|gb|AQ850874.1|AQ850874 LMAJFV1_lm42g05.x1 Leishmania major FV1 random genomic library Leishmania major genomic clone LMAJFV1_lm42g05 3' similar to WP:T17E9.2 CE01406 PNMT ;. Length = 419 Score = 122 bits (306), Expect = 7e-27 Identities = 61/124 (49%), Positives = 86/124 (69%) Frame = +2 Query: 311 LLPREDVVDSYLVESPETHDVTDFCSFYTLPSTILGNPNYTTLKAAYSYYNVATQTSFLQ 370 LLPR+ VV +Y+VE+ + VTDF SFY +PST++GN NY L AAY +Y AT Q Sbjct: 2 LLPRDGVVFTYVVENDKK--VTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYAATSIPLHQ 175 Query: 371 LMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRLKSALKPAELG 430 L+ D LIV+ +GFDV N ++++ N SF+++LKFG GDG L YY YN+ +KP+++ Sbjct: 176 LILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPK-IKPSQVA 352 Query: 431 LVLL 434 LV+L Sbjct: 353 LVML 364
>gi|7804642|emb|AL166863.1|AL166863 C0AG195BB04SP1 G Tetraodon nigroviridis genomic clone 195C08 PUC-Ori. Length = 1154 Score = 71.2 bits (173), Expect(2) = 6e-22 Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 29/94 (30%) Frame = +3 Query: 107 EVYNLLKNNYVEDDENMFRFNYSKEFLRW-----------------------------AL 137 E+Y LL N VEDD+NMFRF+Y EFL W Sbjct: 540 ELYTLLNENXVEDDDNMFRFDYPPEFLLW*F*SSSQIKRKLKIWSICVINLITL*PF*GA 719 Query: 138 RPPGYYQSWHIGVRAKTSKKLVAFISGVPARIRV 171 PPG+ WH GVR +++KLV FIS +PA IR+ Sbjct: 720 APPGWLPQWHCGVRVNSNQKLVGFISAIPATIRI 821
Score = 55.5 bits (132), Expect(2) = 6e-22 Identities = 27/51 (52%), Positives = 35/51 (67%), Gaps = 1/51 (1%) Frame = +2 Query: 177 KMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAA-YTAGVILPTP 226 +M EINFLCVH K RSKR+APV+ +E+TRRV+L I+ + G P P Sbjct: 920 RMVEINFLCVHXKXRSKRVAPVLXREITRRVNLXGIFPGGLHXRGWXCPKP 1072
>gi|9552504|emb|AL319620.1|AL319620 C0AA044CD09C1 A Tetraodon nigroviridis genomic clone 044H17 T7. Length = 1058 Score = 73.6 bits (179), Expect(2) = 1e-18 Identities = 43/115 (37%), Positives = 61/115 (52%), Gaps = 27/115 (23%) Frame = -3 Query: 331 VTDFCSFYTLPSTILGNPNYTTLKAAYSYYNVATQTSFLQLMNDALIVSK---------- 380 +T SFY++ S +L P +T L+ A+ + V+T T+ + LM D LI++K Sbjct: 681 LTGVVSFYSIFSRLLNQPVHTGLRTAHLLFVVSTATNSIDLMEDTLILAKSVGFVMKESD 502 Query: 381 -----------------QKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNY 418 QKG DVF+ALDVM N FL++LKF D L+YYLYN+ Sbjct: 501 VSKTF*RVSFITSFXCEQKGCDVFSALDVMDNSRFLEQLKFSIDDSSLNYYLYNW 337
Score = 42.0 bits (97), Expect(2) = 1e-18 Identities = 19/44 (43%), Positives = 30/44 (68%) Frame = -2 Query: 281 DVPAVTRLLRNYLSQFGVATDFDENDVEHWLLPREDVVDSYLVE 324 D+ + LL+ + +F ++ +VEHWLLPRE+VVD+Y+VE Sbjct: 925 DLAEIHTLLQAGVRKFQLSKILSLQEVEHWLLPRENVVDTYVVE 794
>gi|7808855|emb|AL170798.1|AL170798 C0AG201AF03LP1 G Tetraodon nigroviridis genomic clone 201K05 T7. Length = 959 Score = 92.8 bits (229), Expect = 6e-18 Identities = 41/62 (66%), Positives = 54/62 (86%) Frame = +2 Query: 177 KMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVILPTPITTCQYWHRS 236 +M EINFLCVHKKLRSKR+APV+I+E+TRRV+L+ I+QA YTAGV+LP P+ TC++ R+ Sbjct: 656 RMVEINFLCVHKKLRSKRVAPVLIREITRRVNLQGIFQAVYTAGVVLPKPVGTCRWVRRN 835 Query: 237 LN 238 N Sbjct: 836 RN 841
Score = 64.3 bits (155), Expect(2) = 2e-18 Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 51/166 (30%) Frame = +3 Query: 136 ALRPPGYYQSWHIGVRAKTSKKLVAFISGVPARIRVRDE------------VVKMAEIN- 182 ALRPPG+ WH GVR +++KLV FIS +PA IR+ D + +E Sbjct: 450 ALRPPGWLPQWHCGVRVNSNQKLVGFISAIPATIRIYDRSAAQQATADARICISQSEKQS 629 Query: 183 --FLCVHKK--------LRSKRLAPVMI--------------KEVTRRVHL-----ENIW 213 F C+ ++ ++ AP + +E +RR L N+W Sbjct: 630 ALF*CLERREWWRSISSASTRSSAPNELLRF**EKSQDG*TCRESSRRSTLLGWSCPNLW 809 Query: 214 -QAAYTAGVILPTPI--------TTCQYWHRSLNPKKLIDVGFSRL 250 +A G+ +P + + +YWHRSLNP+KLI+V FS L Sbjct: 810 ARAGG*GGIEIPPDVRLSFTNGPSPHRYWHRSLNPRKLIEVKFSHL 947
Score = 50.8 bits (120), Expect(2) = 2e-18 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = +1 Query: 107 EVYNLLKNNYVEDDENMFRFNYSKEFLRW 135 E+Y LL NYVEDD+NMFRF+YS EFL W Sbjct: 265 ELYTLLNENYVEDDDNMFRFDYSPEFLLW 351
>gi|13847716|gb|AZ976489.1|AZ976489 2M0251K20R Mouse 10kb plasmid UUGC2M library Mus musculus genomic clone UUGC2M0251K20 R. Length = 335 Score = 92.0 bits (227), Expect = 1e-17 Identities = 41/57 (71%), Positives = 51/57 (88%) Frame = +2 Query: 175 VVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVILPTPITTCQ 231 V +M EINFLCVHKKLRSKR+APV+I+E+TRRV+LE I+QA YTAGV+LP P+ TC+ Sbjct: 125 VKRMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPVATCR 295
>gi|12166121|emb|AL404522.1|AL404522 AL404522 AT0AA Saccharomyces servazzii genomic clone AT0AA016H01 T3 similar to Saccharomyces cerevisiae ORF YLR195c [ NMT1 ; N-myristoyltransferase ]. Length = 994 Score = 91.3 bits (225), Expect = 2e-17 Identities = 51/138 (36%), Positives = 76/138 (54%), Gaps = 20/138 (14%) Frame = +3 Query: 302 FDENDVEHWLLPRED---VVDSYLVESPETHDVTDFCSFYTLPSTILGNPNYTTLKAAYS 358 F + +HW L ++ V+ SY+VE+ E ++TDF SFY+LP TIL N Y L Y Sbjct: 45 FSREEFQHWFLGNDETEKVIFSYVVEN-EDGEITDFVSFYSLPFTILENAIYKDLGIGYL 221 Query: 359 YY-----------------NVATQTSFLQLMNDALIVSKQKGFDVFNALDVMHNESFLKE 401 +Y A + L++D ++++K + DVFNAL N L++ Sbjct: 222 FYYASNADFEYNDRXDKEGTAALRKRLDSLISDTVVLAKTQKMDVFNALTSQDNSLXLQD 401 Query: 402 LKFGPGDGQLHYYLYNYR 419 LKFGPGDG L++YL+NY+ Sbjct: 402 LKFGPGDGFLNFYLFNYK 455
>gi|9371135|gb|AZ051049.2|AZ051049 GSSTc12036 Trypanosoma cruzi random genomic library Trypanosoma cruzi genomic clone G1I1N. Length = 651 Score = 84.7 bits (208), Expect = 2e-15 Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%) Frame = +1 Query: 48 HKFWETQPVGQFK-DIGDTSLPEGPIEPATPLSEVKQEPYNLPSVYEWTTCDMNSDDMCS 106 H+FW TQPV Q D DT GP+EP ++++ +P + S +W + +M++ D Sbjct: 100 HQFWNTQPVPQSSIDAADTV---GPLEPXGTVNDIPTDPVAIASTLDWWSPNMDNRDDVR 270 Query: 107 EVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPG 141 +Y LL+++YVED E+MFR +YS +FLRWAL PG Sbjct: 271 ALYELLRDDYVEDVESMFRLDYSDDFLRWALTRPG 375
>gi|9484559|gb|AZ270942.1|AZ270942 RPCI-23-80E14.TJ RPCI-23 Mus musculus genomic clone RPCI-23-80E14. Length = 650 Score = 73.2 bits (178), Expect = 5e-12 Identities = 59/176 (33%), Positives = 88/176 (49%), Gaps = 15/176 (8%) Frame = +3 Query: 273 GFRKMEPRDVPAVTRLLRNYLSQFGVATDFDENDVEHWLLPREDVVDSYLVESPETHDVT 332 G+ ME +D+P V +LL YL QF + +++ LV P H Sbjct: 3 GYNPMEKKDIPLVHQLLSRYLKQFHLTPVMNQSGGGR-----------ALVLPPGEHH*- 146 Query: 333 DFCS---------FYTLPSTILGNPNYTTL------KAAYSYYNVATQTSFLQLMNDALI 377 FC F L I P+ T+ K +NV QT L L+++AL+ Sbjct: 147 HFCGREC*W*GD*FPELFFLIHFPPSS*TIQPRRV*KLYVLLHNVHIQTPLLDLISNALV 326 Query: 378 VSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRLKSALKPAELGLVL 433 +++ K F+VFNALD+M N++FL++LKF GD L YYLY+ + S + ++GLVL Sbjct: 327 LARMKSFNVFNALDLMENKTFLEKLKFCIGDCNLQYYLYS*KCLS-MGEEKVGLVL 491
>gi|6801722|gb|AQ971269.1|AQ971269 RPCI-23-332D13.TV RPCI-23 Mus musculus genomic clone RPCI-23-332D13. Length = 263 Score = 68.2 bits (165), Expect = 2e-10 Identities = 35/74 (47%), Positives = 54/74 (72%) Frame = +3 Query: 360 YNVATQTSFLQLMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYR 419 +NV QT L L+++AL++++ K F+VFNALD+M N++FL++LKF GD L YYLY+ + Sbjct: 45 HNVHIQTPLLDLISNALVLARMKSFNVFNALDLMENKTFLEKLKFCIGDCNLQYYLYS*K 224 Query: 420 LKSALKPAELGLVL 433 S + ++GLVL Sbjct: 225 CLS-MGEEKVGLVL 263
>gi|11865306|emb|AL490833.1|AL490833 TA301A08P Trypanosoma brucei TREU927 sheared genomic DNA Trypanosoma brucei genomic clone 301a08 forward. Length = 377 Score = 67.8 bits (164), Expect = 2e-10 Identities = 29/49 (59%), Positives = 37/49 (75%) Frame = -3 Query: 370 QLMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNY 418 QL+ND LI+ K GFDV N +D+ N ++LKELKF PGDG L+YY YN+ Sbjct: 369 QLVNDLLIIVKLNGFDVCNVVDIYDNGTYLKELKFSPGDGNLYYYFYNW 223
>gi|3902739|gb|AQ276543.1|AQ276543 CITBI-E1-2523O19.TF CITBI-E1 Homo sapiens genomic clone 2523O19. Length = 356 Score = 67.8 bits (164), Expect = 2e-10 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +3 Query: 371 LMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYR 419 ++N ++ QKGFDVFNALD+M N++FL++LKFG GDG L YYLYN+R Sbjct: 36 VLNFKSFLNWQKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWR 182
>gi|2925957|gb|B84825.1|B84825 RPCI11-28G7.TP RPCI-11 Homo sapiens genomic clone RPCI-11-28G7. Length = 430 Score = 67.8 bits (164), Expect = 2e-10 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +2 Query: 371 LMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYR 419 ++N ++ QKGFDVFNALD+M N++FL++LKFG GDG L YYLYN+R Sbjct: 110 VLNFKSFLNWQKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWR 256
>gi|8889093|gb|AZ124646.1|AZ124646 k153r S. kluyveri genomic library Saccharomyces kluyveri genomic. Length = 364 Score = 62.4 bits (150), Expect = 8e-09 Identities = 27/50 (54%), Positives = 38/50 (76%) Frame = +2 Query: 370 QLMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYR 419 QL+NDA ++++ DVFNAL N FL++LKFGPGDG L++YL+NY+ Sbjct: 14 QLINDACVLARDLKMDVFNALTSQDNALFLEDLKFGPGDGFLNFYLFNYK 163
>gi|2512101|gb|B26135.1|B26135 F4M8TRC IGF Arabidopsis thaliana genomic clone F4M8. Length = 446 Score = 60.5 bits (145), Expect = 3e-08 Identities = 29/57 (50%), Positives = 35/57 (60%) Frame = +3 Query: 40 DSMSEAKTHKFWETQPVGQFKDIGDTSLPEGPIEPATPLSEVKQEPYNLPSVYEWTT 96 D + +AK H D+G+TSLPE P+EPA PLSE+KQEP LP YEW T Sbjct: 309 DQIVKAKAHN-----------DVGNTSLPESPVEPANPLSEIKQEPEQLPCGYEWIT 446
>gi|11824934|gb|AZ687788.1|AZ687788 ENTLW05TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic. Length = 892 Score = 60.5 bits (145), Expect = 3e-08 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +3 Query: 356 AYSYYNVATQ-TSFLQLMNDALIVSKQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYY 414 AY YY + F Q D LI + Q DVFN L++ N+ +L +L F PGDG L YY Sbjct: 48 AYQYYYFYDKDVDFKQFFKDILICAVQNHCDVFNCLNISENQQYLADLLFVPGDGYLKYY 227 Query: 415 LYNYRLKSALKPAELGLVL 433 LYN+ ++P +L ++L Sbjct: 228 LYNWACPK-VEPNKLAIIL 281
>gi|7984395|emb|AL262761.1|AL262761 C0BG062CE11LP1 G Tetraodon nigroviridis genomic clone 062J21 T7. Length = 948 Score = 53.5 bits (127), Expect = 4e-06 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = -2 Query: 380 KQKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNY 418 +QKG DVF+ALDVM N FL++LKF D L+YYLYN+ Sbjct: 839 EQKGCDVFSALDVMDNSRFLEQLKFSIDDSSLNYYLYNW 723
>gi|13847340|gb|AZ976113.1|AZ976113 2M0251K20F Mouse 10kb plasmid UUGC2M library Mus musculus genomic clone UUGC2M0251K20 F. Length = 595 Score = 53.5 bits (127), Expect = 4e-06 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = -1 Query: 331 VTDFCSFYTLPSTILGNPNYTTLKAAYSYYNVATQT 366 +TDF SFYTLPST++ +P + +LKAAYS+YN+ T+T Sbjct: 151 LTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTET 44
>gi|11754859|gb|AZ632669.1|AZ632669 1M0487L20F Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC1M0487L20 F. Length = 534 Score = 52.0 bits (123), Expect = 1e-05 Identities = 22/38 (57%), Positives = 27/38 (70%) Frame = -2 Query: 136 ALRPPGYYQSWHIGVRAKTSKKLVAFISGVPARIRVRD 173 ALRPPG+ WH GVR +S+KLV FIS +PA I + D Sbjct: 131 ALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYD 18
>gi|2951104|emb|AJ227280.1|AJ227280 AJ227280 Ciona intestinalis adult Ciona intestinalis genomic clone 5A9. Length = 557 Score = 51.2 bits (121), Expect = 2e-05 Identities = 21/39 (53%), Positives = 28/39 (70%) Frame = +3 Query: 136 ALRPPGYYQSWHIGVRAKTSKKLVAFISGVPARIRVRDE 174 +LRPP + WH GVR + SKKLV FIS +PA ++V D+ Sbjct: 75 SLRPPNWVNDWHCGVRXRKSKKLVGFISAIPALVKVYDK 191
>gi|7984396|emb|AL262762.1|AL262762 C0BG062CE11SP1 G Tetraodon nigroviridis genomic clone 062J21 PUC-Ori. Length = 859 Score = 48.9 bits (115), Expect = 9e-05 Identities = 20/31 (64%), Positives = 27/31 (86%) Frame = +1 Query: 178 MAEINFLCVHKKLRSKRLAPVMIKEVTRRVH 208 M ++ FLCVHKKLR KR+ PV+I+E+TRRV+ Sbjct: 760 MVQVQFLCVHKKLRLKRMTPVLIRELTRRVN 852
Score = 46.6 bits (109), Expect = 5e-04 Identities = 21/40 (52%), Positives = 27/40 (67%) Frame = +2 Query: 132 FLRWALRPPGYYQSWHIGVRAKTSKKLVAFISGVPARIRV 171 FL AL+PP + WH G+R +S KLV FI+ VPA+I V Sbjct: 515 FLLRALQPPNWSAQWHCGIRVVSSNKLVGFIAAVPAKILV 634
>gi|11827941|gb|AZ690795.1|AZ690795 ENTIW07TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic. Length = 878 Score = 35.4 bits (80), Expect = 1.1 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +2 Query: 397 SFLKELKFGPGDGQLHYYLYNYRLKSALKPAELGLVL 433 ++L +L F PGDG L YYLYN+ ++P +L ++L Sbjct: 20 TYLADLLFVPGDGYLKYYLYNWACPK-VEPNKLAIIL 127
>gi|4411520|gb|AQ406155.1|AQ406155 HS_5047_B2_B07_SP6E RPCI-11 Human Male BAC Library Homo sapiens genomic clone Plate=623 Col=14 Row=D. Length = 421 Score = 34.3 bits (77), Expect = 2.4 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = -3 Query: 77 PLSEVKQEPYNLPSVYEWTT----CDMNSDDMCSEVYNLL 112 PL+E K Y+LPS W CD +SDD SE NL+ Sbjct: 287 PLAE*KXNSYHLPSADYWQKQHEPCDASSDDFSSEARNLI 168
>gi|3507873|gb|AQ130707.1|AQ130707 HS_3009_A2_D02_T7 CIT Approved Human Genomic Sperm Library D Homo sapiens genomic clone Plate=3009 Col=4 Row=G. Length = 527 Score = 33.9 bits (76), Expect = 3.2 Identities = 15/49 (30%), Positives = 28/49 (56%) Frame = -3 Query: 317 VVDSYLVESPETHDVTDFCSFYTLPSTILGNPNYTTLKAAYSYYNVATQ 365 ++ SY ESP+ H + CS++T+ + +L Y + A ++Y VA + Sbjct: 231 LIASYSSESPQIHRLLPVCSYFTVCNPLLHKNTYCS*AAPHTYSTVARE 85
>gi|7824334|emb|AL186230.1|AL186230 C0AG245BA05SP1 G Tetraodon nigroviridis genomic clone 245A10 PUC-Ori. Length = 824 Score = 32.3 bits (72), Expect = 9.2 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -3 Query: 252 ARMTMSRTIKLYKLPDAPITPGFRKMEPRDVPAV 285 ++ T +RTI+ + D+ P FR+ EPR++P+V Sbjct: 732 SQQTRTRTIRSVQKSDSEPIPSFREQEPRNIPSV 631
>gi|13803053|gb|AZ940973.1|AZ940973 2M0200J03R Mouse 10kb plasmid UUGC2M library Mus musculus genomic clone UUGC2M0200J03 R. Length = 673 Score = 32.3 bits (72), Expect = 9.2 Identities = 23/79 (29%), Positives = 34/79 (42%) Frame = -2 Query: 15 ADQIVEANPLVKDDTSLETIVRRFQDSMSEAKTHKFWETQPVGQFKDIGDTSLPEGPIEP 74 + Q+V + P + D ++T R + A THK ++ G K D P+ Sbjct: 330 SQQLVTSFPCSQTDRQIQTDTRAHACARVRAHTHKHKHSKGTGHMKCPAD*LPGSDPVTA 151 Query: 75 ATPLSEVKQEPYNLPSVYE 93 TP SEV Y+ P V E Sbjct: 150 *TPSSEVVFLIYSDPEVQE 94
Database: preblast_gss Posted date: Jun 29, 2001 6:01 PM Number of letters in database: 1,356,126,437 Number of sequences in database: 2,521,549 Lambda K H 0.319 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 677898061 Number of Sequences: 2521549 Number of extensions: 9011340 Number of successful extensions: 37137 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 37038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 37128 length of query: 434 length of database: 452,042,145 effective HSP length: 122 effective length of query: 312 effective length of database: 144,413,167 effective search space: 45056908104 effective search space used: 45056908104 frameshift window, decay const: 50, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 72 (32.3 bits)
