Occurence of potentially GPI modified proteins in SWISSPROT (rel. 40, Viridiplantae)

Contact:
Birgit Eisenhaber (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)
Carolyn Schultz (University of Adelaide/Australia)
Paul Dupree and Georg Borner (University of Cambridge/UK)

Summary Table:

Predicted GPI Modification:	22	with N-terminal SP	no N-terminal SP
1:P	13	9	4
1:S (All Hits)	9	4	5
1:S (Hits with positive Total Score)	9	4	5
1:S (Hits with negative Total Score)	-	-	-

N Protein Length Quality Site Score PValue Alternative Site Score PValue Signal Peptide

1 BCB_ARATH 196 1:P 174 17.61 1.596242e-07 2:P 165 16.29 3.655177e-07 yes

2 BCP1_BRACM 119 1:P 88 14.57 1.011272e-06 2:P 91 12.05 3.931428e-06 yes

3 BCP_PEA 189 1:P 166 7.17 3.775497e-05 2:S 167 -1.60 7.973585e-04 yes

4 C71G_ARATH 497 1:P 479 2.90 1.927388e-04 - yes

5 CYB_MARPO 404 1:P 384 2.54 2.177181e-04 2:S 383 1.24 3.355935e-04 -

6 IAR1_ARATH 469 1:P 439 4.99 9.016024e-05 - yes

7 METE_CHLRE 814 1:P 793 5.34 7.876032e-05 - -

8 MP5A_LOLPR 308 1:P 283 3.03 1.839138e-04 2:S 285 0.55 4.180475e-04 -

9 N551_SOYBN 137 1:P 119 13.26 2.089456e-06 2:P 118 3.71 1.446297e-04 -

10 NO16_MEDTR 180 1:P 153 16.34 3.555076e-07 2:P 152 14.90 8.363340e-07 yes

11 NO20_MEDTR 268 1:P 244 14.53 1.032279e-06 - yes

12 NO5_PEA 135 1:P 111 18.97 6.495231e-08 2:P 110 2.44 2.258509e-04 yes

13 NO5_VICSA 124 1:P 99 17.72 1.482587e-07 2:P 100 16.50 3.224350e-07 yes

14 ELI5_HORVU 231 1:S 200 1.23 3.365179e-04 - yes

15 HXK1_ARATH 496 1:S 466 0.49 4.266452e-04 2:S 467 -0.29 5.426538e-04 -

16 LECR_CLALU 290 1:S 274 0.82 3.840521e-04 - yes

17 N552_SOYBN 187 1:S 165 1.05 3.570476e-04 2:S 170 -0.42 5.641493e-04 yes

18 NU2M_CHLRE 382 1:S 349 0.84 3.818754e-04 2:S 363 -1.92 8.724569e-04 yes

19 NU5C_LIGVU 738 1:S 711 0.47 4.284840e-04 - -

20 NU5C_SPIOL 742 1:S 717 0.12 4.785316e-04 - -

N Protein Length Quality Site Score PValue Alternative Site Score PValue Signal Peptide

21 NU5C_TOBAC 740 1:S 711 1.82 2.773216e-04 - -

22 SOD2_MESCR 156 1:S 140 0.57 4.164533e-04 - -

N	Protein	Length	Quality	Site	Score	PValue	Alternative Site	Score	PValue	Signal Peptide
1	BCB_ARATH	196	1:P	174	17.61	1.596242e-07	2:P 165	16.29	3.655177e-07	yes
2	BCP1_BRACM	119	1:P	88	14.57	1.011272e-06	2:P 91	12.05	3.931428e-06	yes
3	BCP_PEA	189	1:P	166	7.17	3.775497e-05	2:S 167	-1.60	7.973585e-04	yes
4	C71G_ARATH	497	1:P	479	2.90	1.927388e-04	-			yes
5	CYB_MARPO	404	1:P	384	2.54	2.177181e-04	2:S 383	1.24	3.355935e-04	-
6	IAR1_ARATH	469	1:P	439	4.99	9.016024e-05	-			yes
7	METE_CHLRE	814	1:P	793	5.34	7.876032e-05	-			-
8	MP5A_LOLPR	308	1:P	283	3.03	1.839138e-04	2:S 285	0.55	4.180475e-04	-
9	N551_SOYBN	137	1:P	119	13.26	2.089456e-06	2:P 118	3.71	1.446297e-04	-
10	NO16_MEDTR	180	1:P	153	16.34	3.555076e-07	2:P 152	14.90	8.363340e-07	yes
11	NO20_MEDTR	268	1:P	244	14.53	1.032279e-06	-			yes
12	NO5_PEA	135	1:P	111	18.97	6.495231e-08	2:P 110	2.44	2.258509e-04	yes
13	NO5_VICSA	124	1:P	99	17.72	1.482587e-07	2:P 100	16.50	3.224350e-07	yes
14	ELI5_HORVU	231	1:S	200	1.23	3.365179e-04	-			yes
15	HXK1_ARATH	496	1:S	466	0.49	4.266452e-04	2:S 467	-0.29	5.426538e-04	-
16	LECR_CLALU	290	1:S	274	0.82	3.840521e-04	-			yes
17	N552_SOYBN	187	1:S	165	1.05	3.570476e-04	2:S 170	-0.42	5.641493e-04	yes
18	NU2M_CHLRE	382	1:S	349	0.84	3.818754e-04	2:S 363	-1.92	8.724569e-04	yes
19	NU5C_LIGVU	738	1:S	711	0.47	4.284840e-04	-			-
20	NU5C_SPIOL	742	1:S	717	0.12	4.785316e-04	-			-

Occurence of potentially GPI modified proteins in SWISSPROT (rel. 40, Viridiplantae)

Contact: Birgit Eisenhaber (IMP/Austria) Michael Wildpaner (IMP/Austria) Frank Eisenhaber (IMP/Austria) Carolyn Schultz (University of Adelaide/Australia) Paul Dupree and Georg Borner (University of Cambridge/UK)

Summary Table:

Last modified: 5th November 2002

Contact:
Birgit Eisenhaber (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)
Carolyn Schultz (University of Adelaide/Australia)
Paul Dupree and Georg Borner (University of Cambridge/UK)