The plant learning set

Contact:
Birgit Eisenhaber (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)
Carolyn Schultz (University of Adelaide/Australia)
Paul Dupree and Georg Borner (University of Cambridge/UK)

N Protein Source Signal Peptide

1 AGP1_NICAL 1 yes

2 AGP1_PYRCO 1 yes

3 AGP_PINTA 2, 10 yes

4 AGP_BRANA 2 yes

5 AGP_LYCES 2, 3 yes

6 AGP_GOSBA 2 yes

7 AGP1_ARATH 2, 2a, 2b yes

8 AGP2_ARATH 2, 2a, 2b yes

9 AGP3_ARATH 2, 2a, 2b, 10 yes

10 AGP4_ARATH 2, 2a, 2b, 8 yes

11 AGP5_ARATH 2, 2a, 2b, 10, 11 yes

12 AGP6_ARATH 2a, 2b yes

13 AGP7_ARATH 2a, 2b, 10, 11 yes

14 AGP8_ARATH 2a yes

15 AGP9_ARATH 2a, 2b yes

16 AG10_ARATH 2a yes

17 AG11_ARATH 2a, 2b yes

18 AG12_ARATH 2a, 2b, 7 yes

19 AG13_ARATH 2a, 2b yes

20 AG14_ARATH 2a, 2b, 7 yes

N Protein Source Signal Peptide

21 AG15_ARATH 2a, 2b, 7, 10, 11 yes

22 AG21_ARATH 2b, 7, 10, 11 yes

23 AG22_ARATH 2b, 7 yes

24 AG27_ARATH 2b, 8a yes

25 NP_568930.1 4, 10, 11 yes

26 BAB02996.1 5, 10 yes

27 NP_186870.1 5 yes

28 T06041 5, 10 yes

29 NP_188311.1 5, 10, 11 yes

30 NO16_MEDTR 9 yes

31 NO5_PEA 9 yes

32 O23120 10, 11 yes

33 Q9SUC9 10, 11 yes

34 O22272 10, 11 yes

35 O49586 2b, 10, 11 yes

36 O48915 10, 11 yes

37 Q9T0I0 10, 11 yes

38 Q9LE56 10, 11 yes

39 Q9SQN9 10, 11 yes

40 Q9T076 8, 10, 11 yes

N Protein Source Signal Peptide

41 Q9ZWA8 2b, 8, 10, 11 yes

42 O64696 10, 11 yes

43 Q40315 10 yes

44 Q9ZTU7 10 yes

45 Q9SPI6 10 yes

46 Q9LEF2 10 yes

47 Q41072 10 yes

48 O49645 10 yes

49 Q96403 10 yes

50 Q9FMI9 10, 11 yes

51 Q9FM36 10, 11 yes

52 Q9FKT1 10, 11 yes

53 Q9ZWN0 10 yes

54 Q9FJ12 10, 11 yes

55 Q9ZNX8 10 yes

56 Q9FHN6 10, 11 yes

57 Q9FHD5 8, 10, 11 yes

58 Q9LVN0 10, 11 yes

59 Q9LVB5 10, 11 yes

60 Q9LTY9, 11 10 yes

N Protein Source Signal Peptide

61 Q9FGT5 8, 10 yes

62 Q9FGH4 8, 10, 11 yes

63 Q9FXS4 10 yes

64 Q9SY22 10, 11 yes

65 O82227 10, 11 yes

66 O82260 10, 11 yes

67 O82761 10, 11 yes

68 O82318 10, 11 yes

69 Q9ZVC7 10 yes

70 Q9SLG3 10, 11 yes

71 Q9SKU7 10, 11 yes

72 Q9ZQ23 2b, 10, 11 yes

73 Q9SR10 10, 11 yes

74 Q9SQR1 10, 11 yes

75 Q9FZD0 10, 11 yes

76 Q9AUW1 10, 12 yes

77 Q9LM00 10 yes

78 Q9XHM2 10 yes

79 Q9SP18 10 yes

80 Q9FPD6 10, 11 yes

N Protein Source Signal Peptide

81 Q9SD15 10, 11 yes

82 Q9SD14 10, 11 yes

83 Q9LYH4 10, 11 yes

84 Q9LXW3 10, 11 yes

85 Q9LJU1 10, 11 yes

86 Q9LJT9 10, 11 yes

87 Q9LJ42 10 yes

88 Q9LX04 10, 12 yes

89 Q9AXA4 10, 12 yes

90 Q41178 10 yes

91 Q39777 10 yes

92 O04529 10, 11 yes

93 Q9C9B1 10, 11 yes

94 Q9C8S1 10, 11 yes

95 Q9FFH6 2b, 10, 11 yes

96 Q9FHX5 10, 11 yes

97 Q9ASI5 10, 12 yes

98 Q9M7Y1 10, 11 yes

99 Q9FT76 10, 11 yes

100 Q94LQ4 10, 12 yes

N Protein Source Signal Peptide

101 Q94HS3 10, 12 yes

102 Q94HS1 10, 12 yes

103 Q94AQ4 10, 11 yes

104 Q949E8 10, 12 yes

105 Q93ZH0 8, 10, 11 yes

106 Q93Z89 10 yes

107 Q93YI5 10 yes

108 Q93XX5 10, 11 yes

109 Q9S7S5 10, 11 yes

110 Q93Z04 10 yes

111 Q9M267 10, 11 yes

112 Q07634 10 yes

113 Q8W0R0 10 yes

114 Q8VYV9 10 yes

115 Q8VY12 10 yes

116 T20M3.11 10 yes

117 F15H11.23 11 yes

118 T20P8.18 11 yes

119 MOE17.14 11 yes

120 MPE11.5 11 yes

N Protein Source Signal Peptide

121 F24M12.370 11 yes

122 T4D2.120 11 yes

123 T15B16.19 11 yes

124 FCAALL.170 11 yes

125 F20O9.4 11 yes

126 T16L4.1 11 yes

127 T10C21.20 11 yes

128 T1A4.70 11 yes

129 T11H3.100 11 yes

130 1885.m00146 11 yes

131 1921.m00146 12 yes

132 3407.m00213 12 yes

133 3430.m00132 12 yes

134 3430.m00133 12 yes

135 3459.m00160 12 yes

136 2728.m00152 12 yes

137 1947.m00148 12 yes

138 2736.m00141 12 yes

139 3540.m00086 12 yes

140 3544.m00160 12 yes

N Protein Source Signal Peptide

141 1977.m00162 12 yes

142 3553.m00183 12 yes

143 3553.m00192 12 yes

144 2773.m00130 12 yes

145 2008.m00150 12 yes

146 2013.m00288 12 yes

147 2032.m00149 12 yes

148 2084.m00148 12 yes

149 2084.m00154 12 yes

150 2114.m00198 12 yes

151 3590.m00146 12 yes

152 2815.m00153 12 yes

153 3646.m00200 12 yes

154 3662.m00131 12 yes

155 2244.m00180 12 yes

156 3685.m00134 12 yes

157 3685.m00135 12 yes

158 3728.m00156 12 yes

159 3733.m00137 12 yes

160 2887.m00097 12 yes

N Protein Source Signal Peptide

161 2887.m00100 12 yes

162 2896.m00106 12 yes

163 3780.m00146 12 yes

164 2323.m00184 12 yes

165 3806.m00137 12 yes

166 2330.m00180 12 yes

167 2964.m00128 12 yes

168 3835.m00134 12 yes

169 2366.m00156 12 yes

170 3863.m00230 12 yes

171 2434.m00145 12 yes

172 2439.m00145 12 yes

173 3032.m00075 12 yes

174 3038.m00130 12 yes

175 3038.m00133 12 yes

176 3903.m00197 12 yes

177 3920.m00220 12 yes

178 3920.m00222 12 yes

179 2457.m00129 12 yes

180 3050.m00125 12 yes

N Protein Source Signal Peptide

181 2506.m00134 12 yes

182 3108.m00136 12 yes

183 3108.m00137 12 yes

184 3108.m00145 12 yes

185 3111.m00145 12 yes

186 4130.m00165 12 yes

187 3131.m00122 12 yes

188 3214.m00173 12 yes

189 4145.m00200 12 yes

190 2534.m00201 12 yes

191 3223.m00186 12 yes

192 2567.m00164 12 yes

193 3257.m00090 12 yes

194 3274.m00177 12 yes

195 3321.m00225 12 yes

196 3323.m00125 12 yes

197 CAA74765.1 5, 8 yes

198 CAB82694.1 2b, 8 yes

199 AAB82617.1 2b, 8 yes

200 BAB09240.1 2b, 8 yes

N Protein Source Signal Peptide

201 AAD55298.1 8 yes

202 BAA97210.1 8, 10, 11 yes

203 BAB08565.1 8 yes

204 CAB36515.1 8, 10 yes

205 NP_197891.1 8, 11 yes

206 CAA78771.1 8, 9, 10, 11 yes

207 AAD23007.1 8, 10, 11 yes

208 AAC27480.1 8, 10, 11 yes

209 NP_176703 8 yes

210 CAB41712.1 6, 8 yes

211 NP_565269.1 8 yes

212 NP_187965.1 8 yes

213 AAF02148.1 8 yes

214 NP_197424.1 8 yes

215 BAB01476.1 8, 10, 11 yes

216 NP_194254.2 8 yes

217 NP_194843.1 8, 10, 11 yes

218 NP_172647.1 8 yes

219 NP_565406.1 8 yes

N Source Status

1 Youl JJ et al., Proc Natl Acad Sci U S A 1998 Jul 7;95(14):7921-6 experimental verified

2 Schultz CJ et al., trends in plant sciences 1998(3), 11, 426-431 predicted

2a Schultz CJ et al., Plant Cell 2000 Sep;12(9):1751-68 predicted, A.thaliana AGP10 experimental verified

2b Schultz CJ et al., Plant Physiol 2002 Aug;129(4):1448-63 predicted

3 Takos AM et al., Plant J 2000 Jan;21(1):43-52 experimental verified

4 Schindelman G et al., Genes Dev 2001 May 1;15(9):1115-27 experimental verified

5 C-terminal motif analysis within the family of Cobra-like sequences predicted

6 Sedbrook JC et al., Plant Cell 2002 Jul;14(7):1635-48 experimental verified

7 Schultz CJ et al. personal communication experimental verified

8 P.Dupree et al. personal communication experimental verified

8a P.Dupree et al. personal communication predicted

9 BIG-PI prediction SWISSPROT predicted

10 BIG-PI prediction SPTREMBL/pln.dat predicted

11 BIG-PI prediction A.thaliana genome predicted

12 BIG_PI prediction O.sativa genome predicted

Last modified: 23rd October 2002