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The jack-knife-test II over the largest subset of non-homologous sequences only : plants

Contact:
Birgit Eisenhaber (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)
Carolyn Schultz (University of Adelaide/Australia)
Paul Dupree and Georg Borner (University of Cambridge/UK)

Summary Table:

  Prediction Quality Rate Percentage
1:P 175/179 97.76%
1:S 3/179 1.68%
1:S (positive Total Score) 3/179 1.68%
1:S (negative Total Score) - 0.00%
1:I 1/179 0.56%
1:N - 0.00%
Not Predicted 1/179 0.56%
Predicted 178/179 99.44%

N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
1 AGP1_PYRCO 145 1:P 121 12.63 -1.18 11.45 5.341578e-06
2 AGP_BRANA 136 1:P 113 13.83 -3.07 10.76 7.513275e-06
3 AGP_LYCES 215 1:P 192 14.09 -3.53 10.56 8.247694e-06
4 AGP_GOSBA 214 1:P 188 13.97 -7.57 6.40 5.193681e-05
5 AGP1_ARATH 131 1:P 108 11.81 -0.06 11.75 4.588968e-06
6 AGP5_ARATH 133 1:P 109 20.29 -1.04 19.25 5.332161e-08
7 AGP7_ARATH 130 1:P 106 19.68 -1.06 18.62 8.217956e-08
8 AGP9_ARATH 191 1:P 172 12.83 -2.67 10.16 9.987064e-06
9 AG10_ARATH 127 1:P 107 15.92 -2.54 13.38 1.951067e-06
10 AG11_ARATH 136 1:P 112 15.76 -3.53 12.23 3.588187e-06
11 AG15_ARATH 61 1:P 35 21.13 -1.77 19.36 4.963278e-08
12 AG21_ARATH 58 1:P 36 15.61 -2.56 13.05 2.330130e-06
13 AG22_ARATH 63 1:P 38 12.46 -1.57 10.89 7.038866e-06
14 AG27_ARATH 125 1:P 98 12.16 -4.76 7.40 3.428578e-05
15 NP_186870.1 452 1:P 426 11.20 -5.09 6.11 5.822022e-05
16 NP_188311.1 653 1:P 628 11.66 -3.72 7.94 2.730615e-05
17 NO16_MEDTR 180 1:P 153 17.22 -0.89 16.33 3.576312e-07
18 NO5_PEA 135 1:P 111 19.85 -0.89 18.96 6.527496e-08
19 O23120 144 1:P 120 12.00 -1.06 10.94 6.856690e-06
20 Q9SUC9 304 1:P 282 17.51 -6.74 10.77 7.461399e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
21 O22272 194 1:P 164 16.89 -5.99 10.90 7.014071e-06
22 O49586 278 1:P 255 17.44 -1.09 16.35 3.533587e-07
23 Q9T0I0 256 1:P 233 14.06 -1.25 12.81 2.645458e-06
24 Q9LE56 180 1:P 158 20.09 -1.09 19.00 6.341594e-08
25 Q9SQN9 192 1:P 166 18.73 -4.14 14.59 9.978570e-07
26 Q9T076 349 1:P 326 14.52 -0.28 14.24 1.214256e-06
27 Q9ZWA8 247 1:P 224 14.59 -0.40 14.19 1.252481e-06
28 O64696 401 1:P 382 12.73 -1.30 11.43 5.378054e-06
29 Q40315 259 1:P 236 18.45 -0.82 17.63 1.578746e-07
30 Q9ZTU7 176 1:P 153 22.06 -0.11 21.95 7.509377e-09
31 Q9SPI6 165 1:P 141 16.44 -2.57 13.87 1.490252e-06
32 Q9LEF2 137 1:P 112 20.11 -0.16 19.95 3.288502e-08
33 Q41072 264 1:P 235 17.28 -0.28 17.00 2.358604e-07
34 O49645 140 1:P 118 15.23 -0.04 15.19 7.055321e-07
35 Q9FMI9 173 1:P 144 16.52 -2.92 13.60 1.733190e-06
36 Q9FM36 130 1:P 109 15.70 -0.05 15.65 5.365458e-07
37 Q9FKT1 168 1:P 144 13.85 -1.67 12.18 3.685851e-06
38 Q9ZWN0 169 1:S 144 7.66 -6.45 1.21 3.387283e-04
39 Q9FJ12 162 1:P 139 15.97 -0.37 15.60 5.550803e-07
40 Q9ZNX8 166 1:P 142 17.00 -0.90 16.10 4.115225e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
41 Q9FHN6 592 1:P 564 13.78 -4.31 9.47 1.381650e-05
42 Q9FHD5 286 1:P 261 11.40 -3.52 7.88 2.800175e-05
43 Q9LVN0 750 1:P 728 15.54 -0.45 15.09 7.459776e-07
44 Q9LTY9 132 1:P 108 19.61 -1.37 18.24 1.054775e-07
45 Q9FGT5 477 1:P 455 14.12 -1.82 12.30 3.465717e-06
46 Q9FGH4 476 1:P 453 12.65 -3.88 8.77 1.891306e-05
47 Q9FXS4 184 1:P 162 20.01 -0.60 19.41 4.774875e-08
48 Q9SY22 239 1:P 216 17.73 -0.16 17.57 1.640648e-07
49 O82260 136 1:P 108 19.68 -4.15 15.53 5.763261e-07
50 O82761 200 1:P 177 16.68 -2.37 14.31 1.167334e-06
51 O82318 960 1:P 943 12.02 -1.40 10.62 8.027312e-06
52 Q9ZVC7 159 1:P 132 14.11 -3.08 11.03 6.570342e-06
53 Q9SLG3 339 1:P 314 8.66 -2.26 6.40 5.188884e-05
54 Q9SKU7 181 1:P 153 13.96 -1.18 12.78 2.690049e-06
55 Q9SR10 159 1:P 137 16.24 0.00 16.24 3.770785e-07
56 Q9AUW1 165 1:P 139 18.61 -0.65 17.96 1.270148e-07
57 Q9SP18 498 1:P 475 18.85 -0.96 17.89 1.331789e-07
58 Q9FPD6 492 1:P 466 11.97 -0.87 11.10 6.364028e-06
59 Q9SD15 518 1:P 497 14.90 -2.47 12.43 3.235131e-06
60 Q9LYH4 181 1:P 154 11.34 -3.55 7.79 2.905715e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
61 Q9LXW3 376 1:P 350 16.49 -2.34 14.15 1.281460e-06
62 Q9LJU1 203 1:P 179 20.10 -1.40 18.70 7.799165e-08
63 Q9LJT9 255 1:P 231 14.34 -1.96 12.38 3.323863e-06
64 Q9LJ42 449 1:P 429 12.01 -2.73 9.28 1.504642e-05
65 Q9LX04 593 1:P 570 21.07 -0.21 20.86 1.694729e-08
66 Q9AXA4 494 1:P 471 11.45 -3.78 7.67 3.065567e-05
67 Q41178 202 1:P 179 14.11 -1.42 12.69 2.826171e-06
68 Q39777 263 1:P 235 14.95 -1.62 13.33 2.010242e-06
69 O04529 378 1:P 356 9.79 -0.38 9.41 1.417055e-05
70 Q9C9B1 193 1:P 169 13.15 -2.31 10.84 7.195017e-06
71 Q9C8S1 407 1:P 385 10.50 -5.22 5.28 8.058097e-05
72 Q9FFH6 247 1:P 224 15.69 -0.01 15.68 5.276350e-07
73 Q9FHX5 425 1:P 401 13.69 -0.15 13.54 1.788456e-06
74 Q9ASI5 159 1:P 129 13.15 -0.58 12.57 3.009814e-06
75 Q9M7Y1 147 1:P 127 15.63 -1.24 14.39 1.114859e-06
76 Q94LQ4 355 1:P 330 14.40 -3.37 11.03 6.564499e-06
77 Q94HS3 389 1:P 362 14.96 -0.84 14.12 1.296936e-06
78 Q94HS1 325 1:P 298 18.19 -12.05 6.14 5.755663e-05
79 Q94AQ4 84 1:P 58 17.63 -0.27 17.36 1.875997e-07
80 Q949E8 202 1:P 181 14.17 -0.87 13.30 2.041521e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
81 Q93ZH0 416 1:P 391 13.99 -1.63 12.36 3.348870e-06
82 Q93Z89 357 1:P 330 10.84 -0.87 9.97 1.092993e-05
83 Q93YI5 198 1:P 172 17.13 -0.87 16.26 3.730355e-07
84 Q93XX5 426 1:P 404 10.71 -2.86 7.85 2.829159e-05
85 Q9S7S5 87 1:P 64 14.68 -1.32 13.36 1.970478e-06
86 Q93Z04 501 1:P 474 12.82 -0.67 12.15 3.749420e-06
87 Q07634 119 1:P 91 14.78 -0.85 13.93 1.448584e-06
88 Q8W0R0 493 1:P 466 21.05 -5.33 15.72 5.145849e-07
89 Q8VYV9 513 1:P 493 17.49 -1.00 16.49 3.237185e-07
90 Q8VY12 438 1:P 409 13.07 -8.79 4.28 1.176843e-04
91 T20M3.11 485 1:P 461 15.12 -7.27 7.85 2.839903e-05
92 F15H11.23 135 1:P 111 17.30 -0.87 16.43 3.351996e-07
93 MOE17.14 62 1:P 35 20.41 -0.01 20.40 2.373204e-08
94 MPE11.5 128 1:P 104 16.35 -13.84 2.51 2.204418e-04
95 F24M12.370 529 1:P 504 9.30 -1.82 7.48 3.322162e-05
96 T4D2.120 483 1:P 451 10.04 -5.55 4.49 1.087371e-04
97 T15B16.19 144 1:P 113 7.99 -2.44 5.55 7.270818e-05
98 FCAALL.170 156 1:P 128 10.63 -1.76 8.87 1.807958e-05
99 F20O9.4 199 1:P 179 16.23 -4.02 12.21 3.619434e-06
100 T16L4.1 76 1:P 55 7.42 -3.63 3.79 1.405609e-04
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
101 T10C21.20 102 1:P 75 10.99 -2.20 8.79 1.874413e-05
102 T1A4.70 116 1:P 89 12.68 -0.72 11.96 4.127162e-06
103 T11H3.100 186 1:P 164 18.80 -1.54 17.26 1.991287e-07
104 1885.m00146 148 1:P 127 13.50 -1.21 12.29 3.478533e-06
105 1921.m00146 65 1:P 39 18.39 -0.22 18.17 1.105391e-07
106 3407.m00213 150 1:P 121 17.48 -0.29 17.19 2.082271e-07
107 3430.m00133 170 1:P 143 11.84 -1.66 10.18 9.910377e-06
108 3459.m00160 149 1:P 126 15.11 -1.27 13.84 1.518794e-06
109 1947.m00148 483 1:P 460 15.32 -2.71 12.61 2.943404e-06
110 2736.m00141 175 1:P 151 7.74 -1.00 6.74 4.512990e-05
111 3544.m00160 478 1:P 450 16.04 -0.02 16.02 4.303807e-07
112 1977.m00162 182 1:P 152 16.71 -1.94 14.77 8.996137e-07
113 3553.m00183 177 1:P 154 10.64 -2.22 8.42 2.214504e-05
114 3553.m00192 491 1:P 467 18.44 -1.52 16.92 2.469609e-07
115 2773.m00130 173 1:P 148 17.54 -1.06 16.48 3.249492e-07
116 2008.m00150 170 1:P 143 13.73 -0.39 13.34 1.991747e-06
117 2013.m00288 696 1:P 665 19.70 -0.20 19.50 4.512212e-08
118 2032.m00149 179 1:P 154 18.61 -0.74 17.87 1.348049e-07
119 2084.m00148 188 1:P 163 15.27 -1.29 13.98 1.406875e-06
120 2114.m00198 155 1:P 128 16.90 -0.03 16.87 2.562523e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
121 3590.m00146 698 1:P 673 18.96 -0.79 18.17 1.105661e-07
122 2815.m00153 423 1:P 395 16.65 -13.33 3.32 1.664272e-04
123 3646.m00200 480 1:P 450 16.82 -1.21 15.61 5.512072e-07
124 3662.m00131 361 1:P 335 22.22 -0.75 21.47 1.081789e-08
125 2244.m00180 200 1:P 175 13.14 -10.69 2.45 2.250936e-04
126 3685.m00134 156 1:P 126 16.57 -1.16 15.41 6.218301e-07
127 3685.m00135 131 1:P 103 14.98 -2.75 12.23 3.591031e-06
128 3728.m00156 374 1:P 351 13.79 -0.57 13.22 2.126303e-06
129 3733.m00137 247 1:P 225 15.04 -12.22 2.82 1.978662e-04
130 2887.m00097 399 1:P 376 11.71 -4.31 7.40 3.434790e-05
131 2887.m00100 70 1:P 46 19.43 -5.26 14.17 1.266656e-06
132 3780.m00146 291 1:S 265 4.93 -3.39 1.54 3.041772e-04
133 3806.m00137 221 1:P 194 9.35 -4.70 4.65 1.024304e-04
134 2330.m00180 145 1:P 128 11.52 -3.91 7.61 3.135599e-05
135 2964.m00128 461 1:P 431 16.56 -12.44 4.12 1.246879e-04
136 3835.m00134 128 1:P 99 12.08 -0.32 11.76 4.571703e-06
137 2366.m00156 181 1:P 158 13.51 -0.04 13.47 1.855693e-06
138 3863.m00230 211 1:P 185 14.60 -1.98 12.62 2.935473e-06
139 2434.m00145 351 1:P 324 14.19 -0.44 13.75 1.598030e-06
140 2439.m00145 767 1:P 740 17.80 -2.14 15.66 5.345605e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
141 3032.m00075 411 1:P 382 17.41 -0.26 17.15 2.147268e-07
142 3038.m00130 188 1:P 163 18.90 -0.46 18.44 9.247470e-08
143 3038.m00133 190 1:P 165 17.21 -0.77 16.44 3.327858e-07
144 3903.m00197 516 1:P 489 7.90 -2.04 5.86 6.432894e-05
145 3920.m00220 271 1:P 246 14.88 -1.98 12.90 2.525073e-06
146 2457.m00129 183 1:P 161 17.13 -2.29 14.84 8.627119e-07
147 3050.m00125 253 1:P 228 17.72 -6.04 11.68 4.751525e-06
148 2506.m00134 69 1:P 40 16.39 -2.16 14.23 1.221046e-06
149 3108.m00136 172 1:P 147 18.54 -0.54 18.00 1.238943e-07
150 3108.m00137 181 1:P 156 18.74 -1.18 17.56 1.644362e-07
151 3108.m00145 537 1:P 512 6.46 -1.21 5.25 8.164021e-05
152 3111.m00145 778 1:P 753 17.10 -0.29 16.81 2.647498e-07
153 4130.m00165 492 1:P 471 17.61 -1.25 16.36 3.500985e-07
154 3131.m00122 331 1:P 306 21.86 -0.02 21.84 8.171073e-09
155 3214.m00173 551 1:P 523 19.74 -0.97 18.77 7.437114e-08
156 2534.m00201 266 1:P 238 15.90 -1.08 14.82 8.745122e-07
157 3223.m00186 165 1:P 142 12.79 -0.48 12.31 3.445637e-06
158 2567.m00164 247 1:P 221 14.15 -0.57 13.58 1.752708e-06
159 3257.m00090 235 1:P 214 21.32 -13.44 7.88 2.795662e-05
160 3274.m00177 278 1:P 253 17.91 -2.11 15.80 4.904260e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
161 3321.m00225 181 1:P 153 16.66 -4.00 12.66 2.867207e-06
162 CAA74765.1 661 1:I 637 6.02 -22.98 -16.96 1.960217e-02
163 CAB82694.1 422 1:P 398 15.40 -5.08 10.32 9.261541e-06
164 BAB09240.1 424 1:P 398 9.96 -1.84 8.12 2.518874e-05
165 AAD55298.1 695 1:P 665 17.92 -1.19 16.73 2.786404e-07
166 BAA97210.1 696 1:P 672 20.16 -1.89 18.27 1.035383e-07
167 BAB08565.1 736 1:P 712 12.01 -4.65 7.36 3.486914e-05
168 CAB36515.1 770 1:P 746 13.91 -3.12 10.79 7.398320e-06
169 AAD23007.1 176 1:P 154 13.07 -3.85 9.22 1.543966e-05
170 AAC27480.1 202 1:P 178 17.68 -0.84 16.84 2.610939e-07
171 NP_176703 475 1:S 449 9.03 -8.14 0.89 3.757015e-04
172 CAB41712.1 587 1:P 562 16.93 -7.10 9.83 1.166788e-05
173 NP_565269.1 501 1:P 470 7.39 -3.51 3.88 1.359403e-04
174 NP_187965.1 505 1:P 473 7.54 -4.40 3.14 1.771030e-04
175 NP_197424.1 189 1:P 164 17.78 -15.19 2.59 2.140655e-04
176 NP_194254.2 589 1:P 563 14.43 -4.98 9.45 1.391133e-05
177 NP_194843.1 484 1:P 460 9.07 -2.18 6.89 4.247477e-05
178 NP_172647.1 511 1:P 487 5.88 -1.81 4.07 1.270422e-04
179 NP_565406.1 350 1:P 318 11.33 -0.77 10.56 8.248735e-06



Last modified: 28th October 2002