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The jack-knife-test I over the whole plant learning set

Contact:
Birgit Eisenhaber (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)
Carolyn Schultz (University of Adelaide/Australia)
Paul Dupree and Georg Borner (University of Cambridge/UK)

Summary Table:

  Prediction Quality Rate Percentage
1:P 202/219 92.24%
1:S 7/219 3.20%
1:S (positive Total Score) 4/219 1.83%
1:S (negative Total Score) 3/219 1.37%
1:I 7/219 3.20%
1:N 3/219 1.37%
Not Predicted 13/219 5.94%
Predicted 206/219 94.06%

N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
1 AGP1_NICAL 132 1:P 108 19.46 -3.33 16.13 4.025127e-07
2 AGP1_PYRCO 145 1:P 121 11.20 -1.18 10.02 1.066431e-05
3 AGP_PINTA 168 1:P 145 17.09 -0.36 16.73 2.784239e-07
4 AGP_BRANA 136 1:P 113 12.66 -2.97 9.69 1.249052e-05
5 AGP_LYCES 215 1:P 192 12.05 -3.47 8.58 2.065695e-05
6 AGP_GOSBA 214 1:P 188 11.14 -7.52 3.62 1.492890e-04
7 AGP1_ARATH 131 1:P 107 11.57 -0.58 10.99 6.692239e-06
8 AGP2_ARATH 126 1:P 102 20.13 -1.05 19.08 5.995435e-08
9 AGP3_ARATH 139 1:P 116 12.46 -0.85 11.61 4.930256e-06
10 AGP4_ARATH 135 1:P 111 21.29 -2.11 19.18 5.619944e-08
11 AGP5_ARATH 133 1:P 109 19.75 -1.15 18.60 8.326596e-08
12 AGP6_ARATH 150 1:P 126 16.21 -6.05 10.16 1.000126e-05
13 AGP7_ARATH 130 1:P 106 18.81 -1.15 17.66 1.548293e-07
14 AGP8_ARATH 323 1:P 295 15.97 -1.33 14.64 9.715563e-07
15 AGP9_ARATH 191 1:P 172 11.37 -2.67 8.70 1.955672e-05
16 AG10_ARATH 127 1:P 107 15.04 -2.77 12.27 3.511448e-06
17 AG11_ARATH 136 1:P 113 14.15 -2.27 11.88 4.292308e-06
18 AG12_ARATH 60 1:P 33 9.61 -7.02 2.59 2.141609e-04
19 AG13_ARATH 59 1:P 38 15.32 -4.72 10.60 8.095970e-06
20 AG14_ARATH 60 1:P 39 15.94 -6.09 9.85 1.157003e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
21 AG15_ARATH 61 1:P 35 20.03 -1.78 18.25 1.047944e-07
22 AG21_ARATH 58 1:P 36 15.29 -2.49 12.80 2.662916e-06
23 AG22_ARATH 63 1:P 38 9.58 -1.48 8.10 2.541158e-05
24 AG27_ARATH 125 1:N 93 1.76 -5.75 -3.99 1.523897e-03
25 NP_568930.1 456 1:P 431 17.78 -0.77 17.01 2.336437e-07
26 BAB02996.1 442 1:P 418 15.86 -0.79 15.07 7.555870e-07
27 NP_186870.1 452 1:S 426 5.86 -5.17 0.69 4.004922e-04
28 T06041 717 1:P 685 7.94 -4.20 3.74 1.431562e-04
29 NP_188311.1 653 1:P 628 8.93 -3.68 5.25 8.165650e-05
30 NO16_MEDTR 180 1:P 153 15.32 -0.83 14.49 1.054824e-06
31 NO5_PEA 135 1:P 111 18.62 -0.91 17.71 1.496727e-07
32 O23120 144 1:P 119 11.17 -0.37 10.80 7.339381e-06
33 Q9SUC9 304 1:P 282 16.45 -6.81 9.64 1.272566e-05
34 O22272 194 1:P 165 16.97 -6.54 10.43 8.804820e-06
35 O49586 278 1:P 253 16.86 -1.17 15.69 5.262112e-07
36 O48915 219 1:P 195 11.88 -1.08 10.80 7.363180e-06
37 Q9T0I0 256 1:P 233 12.74 -1.26 11.48 5.256031e-06
38 Q9LE56 180 1:P 158 19.52 -1.03 18.49 8.984574e-08
39 Q9SQN9 192 1:P 166 17.28 -3.97 13.31 2.028220e-06
40 Q9T076 349 1:P 326 12.98 -0.30 12.68 2.841242e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
41 Q9ZWA8 247 1:P 224 13.24 -0.40 12.84 2.609059e-06
42 O64696 401 1:P 382 11.24 -1.29 9.95 1.102353e-05
43 Q40315 259 1:P 236 17.58 -0.79 16.79 2.687668e-07
44 Q9ZTU7 176 1:P 153 21.46 -0.13 21.33 1.195400e-08
45 Q9SPI6 165 1:P 141 16.45 -2.61 13.84 1.515396e-06
46 Q9LEF2 137 1:P 112 17.70 -0.17 17.53 1.675695e-07
47 Q41072 264 1:P 235 13.84 -0.33 13.51 1.823247e-06
48 O49645 140 1:P 118 14.02 -0.04 13.98 1.406642e-06
49 Q96403 182 1:P 160 19.40 -1.58 17.82 1.391318e-07
50 Q9FMI9 173 1:P 144 15.01 -2.84 12.17 3.696922e-06
51 Q9FM36 130 1:P 109 14.60 -0.06 14.54 1.026316e-06
52 Q9FKT1 168 1:P 144 11.09 -1.71 9.38 1.440168e-05
53 Q9ZWN0 169 1:S 142 3.71 -4.51 -0.80 6.320763e-04
54 Q9FJ12 162 1:P 139 14.63 -0.36 14.27 1.194295e-06
55 Q9ZNX8 166 1:P 142 15.48 -0.89 14.59 9.980684e-07
56 Q9FHN6 592 1:P 564 12.02 -4.21 7.81 2.887733e-05
57 Q9FHD5 286 1:P 259 12.08 -4.85 7.23 3.687332e-05
58 Q9LVN0 750 1:P 728 14.18 -0.54 13.64 1.693869e-06
59 Q9LVB5 223 1:P 196 23.65 -0.69 22.96 3.398336e-09
60 Q9LTY9 132 1:P 108 19.51 -1.37 18.14 1.130641e-07
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
61 Q9FGT5 477 1:P 455 12.55 -1.81 10.74 7.567086e-06
62 Q9FGH4 476 1:P 454 10.17 -2.56 7.61 3.134270e-05
63 Q9FXS4 184 1:P 162 19.17 -0.62 18.55 8.603427e-08
64 Q9SY22 239 1:P 216 16.72 -0.16 16.56 3.102162e-07
65 O82227 207 1:P 182 13.57 -4.12 9.45 1.394172e-05
66 O82260 136 1:P 109 15.71 -3.57 12.14 3.762316e-06
67 O82761 200 1:P 177 14.67 -2.76 11.91 4.232256e-06
68 O82318 960 1:P 944 12.73 -9.22 3.51 1.556065e-04
69 Q9ZVC7 159 1:P 132 14.04 -3.04 11.00 6.673559e-06
70 Q9SLG3 339 1:P 314 5.26 -2.27 2.99 1.863092e-04
71 Q9SKU7 181 1:P 149 11.70 -0.18 11.52 5.155968e-06
72 Q9ZQ23 280 1:P 256 19.21 -1.48 17.73 1.480442e-07
73 Q9SR10 159 1:P 137 15.29 0.00 15.29 6.668049e-07
74 Q9SQR1 491 1:P 465 11.10 -1.77 9.33 1.470637e-05
75 Q9FZD0 197 1:P 172 12.56 -0.53 12.03 3.983735e-06
76 Q9AUW1 165 1:P 139 17.45 -0.60 16.85 2.582005e-07
77 Q9LM00 236 1:P 208 16.71 -0.39 16.32 3.591352e-07
78 Q9XHM2 191 1:P 168 14.87 -0.32 14.55 1.019704e-06
79 Q9SP18 498 1:P 475 18.05 -1.02 17.03 2.311789e-07
80 Q9FPD6 492 1:P 468 5.34 -2.78 2.56 2.164617e-04
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
81 Q9SD15 518 1:P 497 12.20 -2.57 9.63 1.282225e-05
82 Q9SD14 475 1:P 454 15.48 -5.76 9.72 1.227347e-05
83 Q9LYH4 181 1:P 153 9.88 -3.20 6.68 4.631821e-05
84 Q9LXW3 376 1:P 350 14.95 -2.38 12.57 3.007410e-06
85 Q9LJU1 203 1:P 179 19.40 -1.58 17.82 1.391896e-07
86 Q9LJT9 255 1:P 231 13.09 -1.97 11.12 6.302174e-06
87 Q9LJ42 449 1:N 429 9.91 -14.69 -4.78 1.863483e-03
88 Q9LX04 593 1:P 570 20.05 -0.19 19.86 3.502602e-08
89 Q9AXA4 494 1:P 471 9.74 -3.82 5.92 6.277532e-05
90 Q41178 202 1:P 179 14.09 -1.45 12.64 2.905698e-06
91 Q39777 263 1:P 236 8.89 -1.36 7.53 3.245015e-05
92 O04529 378 1:P 356 9.80 -0.38 9.42 1.411425e-05
93 Q9C9B1 193 1:P 169 13.19 -2.29 10.90 6.999393e-06
94 Q9C8S1 407 1:S 385 3.76 -5.32 -1.56 7.879462e-04
95 Q9FFH6 247 1:P 224 15.69 -0.01 15.68 5.271058e-07
96 Q9FHX5 425 1:P 401 13.58 -0.14 13.44 1.888713e-06
97 Q9ASI5 159 1:P 129 9.41 -0.60 8.81 1.865216e-05
98 Q9M7Y1 147 1:P 127 14.31 -1.26 13.05 2.336474e-06
99 Q9FT76 164 1:P 138 14.70 -0.93 13.77 1.575889e-06
100 Q94LQ4 355 1:P 331 6.90 -4.16 2.74 2.032210e-04
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
101 Q94HS3 389 1:P 362 13.27 -0.85 12.42 3.261896e-06
102 Q94HS1 325 1:P 298 18.01 -12.05 5.96 6.186389e-05
103 Q94AQ4 84 1:P 59 17.51 -0.39 17.12 2.180321e-07
104 Q949E8 202 1:P 181 13.15 -0.85 12.30 3.466958e-06
105 Q93ZH0 416 1:P 392 14.78 -2.94 11.84 4.393196e-06
106 Q93Z89 357 1:P 330 10.80 -0.88 9.92 1.118680e-05
107 Q93YI5 198 1:P 172 15.41 -0.81 14.60 9.906115e-07
108 Q93XX5 426 1:P 404 8.51 -3.00 5.51 7.389798e-05
109 Q9S7S5 87 1:P 64 13.23 -1.41 11.82 4.421805e-06
110 Q93Z04 501 1:P 474 11.08 -0.65 10.43 8.785542e-06
111 Q9M267 117 1:P 88 13.95 -0.01 13.94 1.437336e-06
112 Q07634 119 1:P 91 13.75 -0.88 12.87 2.574486e-06
113 Q8W0R0 493 1:P 466 19.71 -5.34 14.37 1.127684e-06
114 Q8VYV9 513 1:P 493 16.79 -1.03 15.76 5.047580e-07
115 Q8VY12 438 1:S 409 11.10 -9.53 1.57 3.018407e-04
116 T20M3.11 485 1:P 461 13.29 -7.70 5.59 7.146509e-05
117 F15H11.23 135 1:P 111 14.28 -0.83 13.45 1.884122e-06
118 T20P8.18 176 1:P 149 14.04 -3.09 10.95 6.849019e-06
119 MOE17.14 62 1:P 35 20.44 -0.01 20.43 2.320556e-08
120 MPE11.5 128 1:I 104 15.28 -13.75 1.53 3.055977e-04
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
121 F24M12.370 529 1:P 504 9.35 -1.97 7.38 3.454778e-05
122 T4D2.120 483 1:P 451 8.34 -5.45 2.89 1.934138e-04
123 T15B16.19 144 1:P 113 5.18 -2.45 2.73 2.039522e-04
124 FCAALL.170 156 1:P 129 10.71 -2.15 8.56 2.082315e-05
125 F20O9.4 199 1:P 179 15.49 -4.08 11.41 5.444213e-06
126 T16L4.1 76 1:I 54 8.80 -10.42 -1.62 8.006180e-04
127 T10C21.20 102 1:P 75 9.47 -2.15 7.32 3.547508e-05
128 T1A4.70 116 1:P 89 11.18 -0.74 10.44 8.742071e-06
129 T11H3.100 186 1:P 164 18.24 -1.53 16.71 2.825199e-07
130 1885.m00146 148 1:P 127 12.16 -1.22 10.94 6.866793e-06
131 1921.m00146 65 1:P 39 17.34 -0.18 17.16 2.134782e-07
132 3407.m00213 150 1:P 121 13.47 -0.26 13.21 2.137275e-06
133 3430.m00132 203 1:P 180 19.20 -0.53 18.67 7.920772e-08
134 3430.m00133 170 1:P 143 11.94 -1.70 10.24 9.621432e-06
135 3459.m00160 149 1:P 126 13.50 -1.24 12.26 3.528175e-06
136 2728.m00152 224 1:P 194 20.78 -2.84 17.94 1.292262e-07
137 1947.m00148 483 1:P 460 15.25 -2.83 12.42 3.247242e-06
138 2736.m00141 175 1:P 150 7.39 -3.18 4.21 1.205312e-04
139 3540.m00086 603 1:P 573 9.02 -2.18 6.84 4.336783e-05
140 3544.m00160 478 1:P 450 14.51 -0.01 14.50 1.050422e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
141 1977.m00162 182 1:P 152 15.23 -1.79 13.44 1.892829e-06
142 3553.m00183 177 1:P 154 10.66 -2.23 8.43 2.206256e-05
143 3553.m00192 491 1:P 467 15.69 -1.53 14.16 1.270954e-06
144 2773.m00130 173 1:P 148 17.53 -1.10 16.43 3.361355e-07
145 2008.m00150 170 1:P 143 13.82 -0.34 13.48 1.848594e-06
146 2013.m00288 696 1:P 665 18.65 -0.24 18.41 9.429410e-08
147 2032.m00149 179 1:P 154 18.56 -0.74 17.82 1.390640e-07
148 2084.m00148 188 1:P 165 14.52 -0.60 13.92 1.452554e-06
149 2084.m00154 171 1:P 145 17.22 -2.36 14.86 8.543174e-07
150 2114.m00198 155 1:P 128 13.82 -0.03 13.79 1.557352e-06
151 3590.m00146 698 1:P 673 17.71 -0.72 16.99 2.370413e-07
152 2815.m00153 423 1:I 395 12.93 -13.77 -0.84 6.396717e-04
153 3646.m00200 480 1:P 450 16.98 -1.16 15.82 4.851026e-07
154 3662.m00131 361 1:P 335 21.33 -0.82 20.51 2.189692e-08
155 2244.m00180 200 1:I 175 10.37 -11.49 -1.12 6.936957e-04
156 3685.m00134 156 1:P 126 14.91 -1.08 13.83 1.530603e-06
157 3685.m00135 131 1:P 103 13.70 -2.70 11.00 6.682785e-06
158 3728.m00156 374 1:P 351 12.23 -0.57 11.66 4.804573e-06
159 3733.m00137 247 1:P 225 15.08 -12.23 2.85 1.960497e-04
160 2887.m00097 399 1:P 376 11.97 -4.50 7.47 3.326876e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
161 2887.m00100 70 1:P 46 18.56 -5.40 13.16 2.204549e-06
162 2896.m00106 208 1:P 183 13.56 -0.38 13.18 2.175700e-06
163 3780.m00146 291 1:S 265 1.46 -3.44 -1.98 8.876564e-04
164 2323.m00184 468 1:P 437 15.51 -12.24 3.27 1.693060e-04
165 3806.m00137 221 1:S 194 5.77 -4.74 1.03 3.591786e-04
166 2330.m00180 145 1:P 128 10.33 -3.93 6.40 5.194191e-05
167 2964.m00128 461 1:P 430 15.51 -12.17 3.34 1.651401e-04
168 3835.m00134 128 1:P 97 9.22 -0.23 8.99 1.717909e-05
169 2366.m00156 181 1:P 157 12.39 -0.11 12.28 3.493382e-06
170 3863.m00230 211 1:P 186 12.93 -0.34 12.59 2.980594e-06
171 2434.m00145 351 1:P 324 12.33 -0.43 11.90 4.257699e-06
172 2439.m00145 767 1:P 740 16.49 -2.09 14.40 1.113191e-06
173 3032.m00075 411 1:P 382 17.34 -0.26 17.08 2.240405e-07
174 3038.m00130 188 1:P 162 18.59 -0.14 18.45 9.179913e-08
175 3038.m00133 190 1:P 165 16.09 -0.83 15.26 6.787406e-07
176 3903.m00197 516 1:P 489 7.95 -2.07 5.88 6.375557e-05
177 3920.m00220 271 1:P 246 13.50 -2.15 11.35 5.596862e-06
178 3920.m00222 257 1:P 236 18.03 -12.01 6.02 6.030571e-05
179 2457.m00129 183 1:P 161 15.46 -2.32 13.14 2.222682e-06
180 3050.m00125 253 1:P 233 13.68 -2.94 10.74 7.566023e-06
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
181 2506.m00134 69 1:P 40 16.23 -2.12 14.11 1.308340e-06
182 3108.m00136 172 1:P 147 15.02 -0.56 14.46 1.076543e-06
183 3108.m00137 181 1:P 156 17.62 -1.22 16.40 3.414623e-07
184 3108.m00145 537 1:P 512 6.53 -1.33 5.20 8.303140e-05
185 3111.m00145 778 1:P 753 13.92 -0.30 13.62 1.712957e-06
186 4130.m00165 492 1:P 470 16.85 -1.31 15.54 5.733008e-07
187 3131.m00122 331 1:P 306 20.65 -0.02 20.63 2.009458e-08
188 3214.m00173 551 1:P 523 19.48 -0.98 18.50 8.877655e-08
189 4145.m00200 468 1:P 443 18.74 -0.81 17.93 1.298271e-07
190 2534.m00201 266 1:P 238 15.95 -1.10 14.85 8.613207e-07
191 3223.m00186 165 1:P 142 11.85 -0.49 11.36 5.593285e-06
192 2567.m00164 247 1:P 220 13.33 -0.15 13.18 2.179366e-06
193 3257.m00090 235 1:P 213 21.13 -13.83 7.30 3.579574e-05
194 3274.m00177 278 1:P 253 16.75 -2.05 14.70 9.360773e-07
195 3321.m00225 181 1:P 154 12.32 -4.08 8.24 2.389835e-05
196 3323.m00125 63 1:P 36 16.27 -0.32 15.95 4.499056e-07
197 CAA74765.1 661 1:I 638 -2.86 -15.62 -18.48 2.436684e-02
198 CAB82694.1 422 1:P 398 14.09 -5.21 8.88 1.804750e-05
199 AAB82617.1 420 1:P 392 15.53 -1.34 14.19 1.248686e-06
200 BAB09240.1 424 1:P 398 8.02 -2.02 6.00 6.085236e-05
N   ID Length Prediction Quality Site Profile Score Function Score Total Score PValue
201 AAD55298.1 695 1:P 665 17.84 -1.15 16.69 2.866493e-07
202 BAA97210.1 696 1:P 672 17.26 -1.85 15.41 6.212832e-07
203 BAB08565.1 736 1:P 712 12.11 -5.20 6.91 4.203497e-05
204 CAB36515.1 770 1:P 746 13.97 -3.43 10.54 8.346148e-06
205 NP_197891.1 186 1:P 164 18.10 -1.55 16.55 3.113138e-07
206 CAA78771.1 196 1:P 174 18.39 -1.57 16.82 2.631497e-07
207 AAD23007.1 176 1:P 155 10.60 -2.44 8.16 2.474565e-05
208 AAC27480.1 202 1:P 178 16.41 -0.84 15.57 5.637099e-07
209 NP_176703 475 1:S 449 8.98 -8.30 0.68 4.022623e-04
210 CAB41712.1 587 1:P 562 14.83 -6.95 7.88 2.796432e-05
211 NP_565269.1 501 1:I 483 5.11 -10.23 -5.12 2.026685e-03
212 NP_187965.1 505 1:P 473 7.58 -4.45 3.13 1.775933e-04
213 AAF02148.1 252 1:P 226 13.46 -0.68 12.78 2.699791e-06
214 NP_197424.1 189 1:I 164 16.33 -15.15 1.18 3.428612e-04
215 BAB01476.1 203 1:P 181 17.97 -0.86 17.11 2.199230e-07
216 NP_194254.2 589 1:P 563 12.06 -5.09 6.97 4.115357e-05
217 NP_194843.1 484 1:P 458 6.51 -0.70 5.81 6.557791e-05
218 NP_172647.1 511 1:N 487 3.01 -5.82 -2.81 1.114793e-03
219 NP_565406.1 350 1:P 318 8.81 -0.78 8.03 2.618463e-05



Last modified: 28th October 2002