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| Protein Families | Number of Proteins with predicted N-terminal Signal Peptide | Number of Proteins without predicted N-terminal Signal Peptide |
| Agglutinin-like | 2 | - |
| Other Cell Wall Proteins | 11 | 1 |
| Factor-Induced Gene 2 (FIG2) | 1 | - |
| Flocculins | 3 | - |
| GAS1 | 5 | - |
| Lysophospholipases | 3 | - |
| Peptidases | 4 | - |
| Receptor-like | 1 | - |
| SCP-like | 1 | - |
| Seripauperin and TIP1 family | 7 | - |
| SPS2-like | 2 | - |
| Sugar Hydrolases | 5 | 1 |
| Transporters | 1 | 2 |
| Yeast PIR protein repeats | 3 | - |
| Other Functions | - | 6 |
| Hypothetical Proteins/Unknown Function | 10 | 6 |

Last modified: 17th September 2003
Agglutinin-like
YJR004C (SAG1_YEAST Alpha-agglutinin precursor)
YNR044W
Other Cell Wall Proteins
YDR077W (cell surface glycoprotein; Sed1p)
YER150W (cell surface glycoprotein; Sed1p homolog)
YDR134C (CW12_YEAST homolog, also Flocculin)
YLR110C (CW12_YEAST, also Flocculin)
YLR390W-A (CW14_YEAST)
YDR534C (FIT1, FIT2, and FIT3 homolog)
YOR214C (Hamada et al. 1998)
YOR383C (FIT1, FIT2, and FIT3 homolog)
YNL300W (Hamada et al. 1998)
YNL327W (EGT2_YEAST homolog)
YOL155C (cell wall protein Awa1p)
without predicted N-terminal signal peptide
YOR382W (FIT1, FIT2, and FIT3 homolog)
Factor-Induced Gene 2
YCR089W (FIG2)
Flocculins (PF00624, Flocculin repeat)
YAL063C
YAR050W
YHR211W
GAS1 (PF03198, Glycolipid anchored surface protein (GAS1))
YMR215W
YMR307W
YOL030W
YLR343W (S>0)
YOL132W (S>0)
Lysophospholipases (PLA2_B, PF01735)
YMR006C
YMR008C
YOL011W
Peptidases
Eukaryotic aspartyl protease (PF00026)
YDR144C
YIR039C
YLR121C
YLR120C (S>0)
Recep_L_domain (PF01030, Receptor L domain)
YDR055W
SCP (PF00188, SCP-like extracellular protein)
YJL078C
Seripauperin and TIP1 family (SRP1_TIP1, PF00660)
YBR067C
YER011W
YIL011W
YJR150C
YJR151C
YOR009W
YOR010C
SPS2-like
YCL048W (SPS2-LIKE, Ecm33p homolog)
YDR522C (SPS2-LIKE, Ecm33p homolog)
Sugar Hydrolases
glycosyl hydrolases (families 16 and 76; PF00722, PF03663)
YEL040W (Glyco_hydro_16)
YGR189C (Glyco_hydro_16)
YKL046C (Glyco_hydro_76)
YMR238W (Glyco_hydro_76)
Glucoamylase
YIR019C
without predicted N-terminal signal peptide
YMR317W
Transportes
YKL175W (PF02535, ZIP Zinc transporter)
without predicted N-terminal signal peptide
YAL022C (PF01733, Nucleoside transporter)
YNR056C (S>0) (regulator of KAPA/DAPA transport)
Yeast PIR protein repeats (PF00399, yeast_PIR)
YHR126C
YKL096W
YKL096W-A
Other Functions
without predicted N-terminal signal peptide
YNL111C (S>0) (PF00173, Heme/Steroid binding domain)
YGR136W (PF00018, SH3 domain)
YOR075W (t_SNARE)
YER100W (PF00179, Ubiquitin-conjugating enzyme)
YDL195W (S>0) (PF00400, WD domain, G-beta repeat)
YDR263C (S>0) (PF00752, XPG N-terminal domain)
Hypothetical Proteins/Unknown Function
YLR040C
YLR042C
YLR194C
YMR122W-A
YMR200W
YMR251W-A
YNL190W
YOL052C-A
YPL130W (SPO19)
YGR228W (S>0)
without predicted N-terminal signal peptide
YLR220W (PF01988, DUF125)
YBL091C-A
YDL039C
YGR259C
YKL006C-A (Required for transport of proteins between an early and a later golgi compartment)
YKR033C
