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Functional classification of Neurospora crassa hits

Contact:
Birgit Eisenhaber (IMP/Austria)
Georg Schneider (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)

Summary Table:

Protein Families Number of Proteins with predicted N-terminal Signal Peptide Number of Proteins without predicted N-terminal Signal Peptide
Agglutinin-like - 1
Other Cell Wall Proteins 1 -
Copper/zinc superoxide dismutases (SODC) 1 -
Cutinases - 1
Fasciclins 1 -
GAS1 4 -
Glycosyl transferases group 1 - 1
Lysophospholipases - 1
Pectin metabolism related 1 -
Peptidases 5 1
Plastocyanin-like 1 -
SCP-like 1 -
Signaling receptor-like 1 -
SPS2-like 1 -
Sugar Hydrolases 14 2
Thaumatins - 1
Transporters - 1
Other Functions 5 11
Hypothetical Proteins/Unknown Function 51 27

Agglutinin-like



without predicted N-terminal signal peptide


NCU03773.1 hypothetical protein (86838 - 88452) 






Other Cell Wall Proteins


NCU01418.1 hypothetical protein (9629 - 8885) (SED1_YEAST homolog)





Copper/zinc superoxide dismutase (SODC) (PF00080, sodcu)


NCU03013.1 hypothetical protein ( related to cytosolic Cu/Zn superoxide dismutase [imported]





Cutinases


without predicted N-terminal signal peptide


NCU09663.1 hypothetical protein (62722 - 63811)






Fasciclin (PF02469, Fasciclin domain)


NCU09568.1 hypothetical protein (35577 - 34409)





GAS1 (PF03198, Glycolipid anchored surface protein (GAS1))


NCU06781.1 hypothetical protein (36667 - 34984) 
NCU07253.1 hypothetical protein (4440 - 5967)
NCU01162.1 hypothetical protein (23125 - 24679) 
NCU06850.1 hypothetical protein (35267 - 36686)  (S>0)





Glycos_transf_1 (PF00534, Glycosyl transferases group 1)


without predicted N-terminal signal peptide


NCU03503.1 hypothetical protein (23959 - 22477)






Lysophospholipases (PLA2_B, PF01735)


without predicted N-terminal signal peptide


NCU03141.1 hypothetical protein ( (AF045574) lysophospholipase [ [Neurospora crassa] ) (30803 - 32901) 


 



Pectate lyase (pec_lyase, PF00544)


NCU06326.1 hypothetical protein (136290 - 135066) (S>0)





Peptidases


Eukaryotic aspartyl protease (PF00026)


NCU09155.1 hypothetical protein (32283 - 34043)
NCU07063.1 hypothetical protein (10422 - 12173) 
NCU02956.1 hypothetical protein (8146 - 6508)
NCU03168.1 hypothetical protein (37309 - 38898) 



without predicted N-terminal signal peptide


NCU00338.1 hypothetical protein (435220 - 436561) 


 

Peptidase_C50 (PF03568, Peptidase family C50)


NCU00205.1 hypothetical protein (22818 - 29375) (S>0)





Cu_bind_like (PF02298, Plastocyanin-like domain)


NCU04496.1 predicted protein (118186 - 118965)





SCP (PF00188, SCP-like extracellular protein)


NCU05618.1 hypothetical protein (1066 - 122)





Signaling receptor-like


NCU00473.1 hypothetical protein (89564 - 90754) (MAP3K-like protein kinase)





SPS2-like


NCU08936.1 hypothetical protein (20878 - 19499) (EC33_YEAST homolog)





Sugar Hydrolases


glycosyl hydrolases (families 13 (alpha amylase), 16, 17, 18, 31, 76; PF00128, PF00722,
PF00332, PF00704, PF01055, PF03663)


NCU08131.1 hypothetical protein (33353 - 31612) ; alpha amylase
NCU09117.1 hypothetical protein (11071 - 12284) ; Glyco_hydro_16 
NCU05686.1 hypothetical protein (24099 - 25654) ; Glyco_hydro_16 
NCU05974.1 hypothetical protein (5932 - 4771) ; Glyco_hydro_16
NCU09175.1 hypothetical protein (72149 - 73381) ; Glyco_hydro_17
NCU06381.1 hypothetical protein (14462 - 13104) ; Glyco_hydro_17 
NCU02184.1 hypothetical protein (62358 - 57985) ; Glyco_hydro_18
NCU02583.1 hypothetical protein (264748 - 268132) ; Glyco_hydro_31
NCU00086.1 hypothetical protein (10836 - 12047) ; Glyco_hydro_76



without predicted N-terminal signal peptide


NCU06504.1 predicted protein (119836 - 120846) ; Glyco_hydro_16
NCU00061.1 predicted protein (941 - 2797) ; Glyco_hydro_16


 


chitinase 3


NCU03530.1 hypothetical protein (42881 - 41902)



chitosanases


NCU02909.1 hypothetical protein (118511 - 120929)



glucanases


NCU01353.1 hypothetical protein (199494 - 201795)



rhamnogalacturonase


NCU05598.1 PUTATIVE RHAMNOGALACTURONASE PRECURSOR (RHAMNOGALACTURONAN LYASE) (RGASE) (ASCUS DEVELOPMENTPROTEIN 1) (ASD-I) (202668 - 200984)



Beta-glucosidases (SUN family, PF03856)


NCU09733.1 hypothetical protein (35929 - 34389)





Thaumatin (PF00314, Thaumatin family)


without predicted N-terminal signal peptide


NCU00572.1 hypothetical protein (98997 - 97433)


 



Transportes


without predicted N-terminal signal peptide


NCU05391.1 hypothetical protein ( (AL389900) related to finger protein XFG 68 [Neurospora crassa] ) (S>0) (phosphate transport protein MIR1)


 



Other Functions


NCU06703.1 hypothetical protein (88393 - 90492) (calcium channel MID1)
NCU04616.1 predicted protein (81898 - 79795) (collagen)
NCU00950.1 hypothetical protein (36336 - 34841)  (S>0) (Dus (PF01207, Dihydrouridine synthase))
NCU04066.1 predicted protein (246313 - 248060) (oxidoreductase)
NCU09785.1 hypothetical protein (6451 - 4840) (oxidoreductase)



without predicted N-terminal signal peptide


NCU06962.1 predicted protein (16752 - 14346) (PF00583, Acetyltransferase (GNAT) family)
NCU01856.1 predicted protein (829 - 2239)  (S>0) (PF00170, bZIP transcription factor)
NCU05383.1 hypothetical protein ( (AL451019) conserved hypothetical protein ) (S>0) (PF04082, Fungal specific transcription factor domain)
NCU09556.1 predicted protein (63805 - 65729) (PF00046, Homeobox domain)
NCU06733.1 hypothetical protein (25056 - 32626)  (N-terminal domain, PF00225, Kinesin motor domain)
NCU03099.1 hypothetical protein (9033 - 7672) (rrm, PF00076, RNA recognition motif)
NCU00696.1 hypothetical protein (427509 - 426403) (PF00018, SH3 domain)
NCU01575.1 hypothetical protein ( syntaxin 8 related protein [imported] ) (syntaxin)
NCU06777.1 predicted protein (26222 - 27157) (S>0) (syntaxin)
NCU00466.1 hypothetical protein (71342 - 73612) (PF00749, tRNA synthetases class I (E and Q), catalytic domain)
NCU01569.1 hypothetical protein ( (AL355930) conserved hypothetical protein (PF00400, WD domain, G-beta repeat)


 



Hypothetical Proteins/Unknown Function


NCU09072.1 predicted protein (10092 - 11165)
NCU09099.1 predicted protein (103304 - 104155)
NCU09133.1 predicted protein (51532 - 50699) 
NCU09263.1 predicted protein (86205 - 86981) 
NCU09647.1 hypothetical protein (15237 - 16291)
NCU09729.1 hypothetical protein (17369 - 20280)  (mucin)
NCU09851.1 predicted protein (19927 - 20805) 
NCU09868.1 predicted protein (38348 - 37953) 
NCU09929.1 hypothetical protein (32213 - 33132)
NCU06607.1 predicted protein (59524 - 61397) 
NCU07277.1 hypothetical protein (78551 - 76284) 
NCU07454.1 predicted protein (102740 - 103375) (interacting protein 1; MIP1 [Magnaporthe grisea])
NCU07485.1 predicted protein (28076 - 27267) 
NCU07776.1 hypothetical protein (22187 - 22824) 
NCU07962.1 predicted protein (49380 - 50110) 
NCU08090.1 predicted protein (136969 - 136601)
NCU08193.1 hypothetical protein (16848 - 16003) 
NCU08243.1 predicted protein (172323 - 169940) 
NCU08318.1 predicted protein (103406 - 102544) 
NCU00175.1 predicted protein (16505 - 15528) 
NCU00267.1 predicted protein (160807 - 160128) 
NCU00270.1 predicted protein (176410 - 175082)
NCU00322.1 predicted protein (380972 - 380443) 
NCU00881.1 predicted protein (74761 - 73824) 
NCU00937.1 predicted protein (89396 - 91353)
NCU00957.1 predicted protein (54572 - 55349)
NCU01351.1 hypothetical protein (195241 - 196412) 
NCU01403.1 predicted protein (9655 - 8183) 
NCU01425.1 predicted protein (27189 - 26278)
NCU01462.1 predicted protein (3475 - 2483) 
NCU01549.1 hypothetical protein (35971 - 39426) (related to hook3 human Golgi-mircrotubles)
NCU02041.1 predicted protein (65221 - 64445)
NCU02584.1 predicted protein (271139 - 272378) 
NCU02880.1 predicted protein (24021 - 24581)
NCU02884.1 predicted protein (37727 - 38563) 
NCU03210.1 predicted protein (75530 - 76721) (blast cell wall bacteria)
NCU03222.1 predicted protein (119457 - 120195) 
NCU03293.1 predicted protein (54552 - 55073)
NCU03602.1 hypothetical protein (46133 - 47509) 
NCU03775.1 hypothetical protein (92102 - 92730) 
NCU03873.1 predicted protein (29296 - 28659)
NCU04493.1 predicted protein (111096 - 111749) 
NCU04542.1 predicted protein (23586 - 24336) 
NCU04543.1 predicted protein (25806 - 26738)
NCU05229.1 hypothetical protein (35596 - 36429) (blast glycoprotein gp2 virus)
NCU05318.1 predicted protein (39718 - 38891) 
NCU05395.1 hypothetical protein (31022 - 31390) 
NCU05667.1 hypothetical protein (20495 - 19836) 
NCU06185.1 predicted protein (49416 - 48679) 
NCU02099.1 predicted protein (42387 - 40934) (S>0)
NCU03434.1 predicted protein (38874 - 39194) (S>0)



without predicted N-terminal signal peptide


NCU09030.1 predicted protein (37386 - 40674)
NCU09359.1 predicted protein (2591 - 1657)
NCU09375.1 predicted protein (12985 - 12163) 
NCU09479.1 hypothetical protein (5817 - 6685)
NCU09935.1 hypothetical protein (1348 - 2576)
NCU07582.1 predicted protein (7656 - 10890) 
NCU08244.1 predicted protein (174163 - 172576) 
NCU08541.1 predicted protein (49241 - 48831
NCU06367.1 hypothetical protein (111597 - 112804)
NCU00048.1 predicted protein (40055 - 41050) 
NCU00425.1 predicted protein (27790 - 28529) 
NCU01286.1 predicted protein (32565 - 33044)
NCU01410.1 hypothetical protein (21439 - 20503)
NCU01519.1 hypothetical protein ( hypothetical protein B5O22.50 [imported]
NCU02610.1 hypothetical protein (77309 - 76814) 
NCU02878.1 predicted protein (17307 - 19251)
NCU03889.1 predicted protein (16356 - 16718) (SNARE, transport Golgi blast)
NCU05170.1 predicted protein (27574 - 27975)
NCU05183.1 predicted protein (24303 - 20767) 
NCU05609.1 predicted protein (240773 - 239443)
NCU05772.1 hypothetical protein ( (AF321882) TOM6 [Neurospora crassa]
NCU06072.1 predicted protein (107161 - 104479) 
NCU08929.1 predicted protein (4045 - 4830) (S>0)
NCU08285.1 predicted protein (17877 - 17611)  (S>0)
NCU01487.1 predicted protein (91974 - 93401)  (S>0)
NCU03519.1 hypothetical protein (7435 - 8209)  (S>0)
NCU04487.1 predicted protein (92490 - 93810)  (S>0)


 



















Last modified: 8th September 2003