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Analysis of volume compensation in the omega-site region

Contact:
Birgit Eisenhaber (IMP/Austria)
Georg Schneider (IMP/Austria)
Michael Wildpaner (IMP/Austria)
Frank Eisenhaber (IMP/Austria)

# 
# ------------------------------------------------------------------- #
# 
# package *-> main.Linux_i686 <-*
# *******************************
# 
# copyright by Birgit Eisenhaber, September 1997
#              E-mail Birgit.Eisenhaber@imp.univie.ac.at
#              WWW    http://mendel.imp.univie.ac.at
#              Post   IMP, Dr. Bohr-Gasse 7, A-1030 Vienna, Austria
#              Tel.   +43-1-79730557, FAX +43-1-7987153
# All rights reserved.
# 
# name of executable           : main.Linux_i686
# time of program compilation  : Aug 11 2003 (15:49:25)
# time of program execution    : Mon Aug 11 15:49:28 2003
# version of the code          : Revision: 4.1 (Date: 2003/05/20 14:22:12)
# 
ReadAapLib: AAProperty library opened
Number of entries in AapLib: <682>
-->ReadGPILib: GPI library opened
number of entries of file 1                   :   254
number of accepted entries of file 1          :   254
total number of entries                       :   254

-->Statistic_confidence of GPILib 1 : 
number of accepted entries                    :   254
number of entries with certain GPI-site       :     5
number of entries with potential GPI-site     :   249
number of entries with GPI-site by similarity :     0

-->GPIStatistic_Length: GPILibNumber = 1
Lmin                :  17 ( entry: 7609, file: 1 )
Lmax                :  33 ( entry: AAC35942, file: 1 )
deltaL              :   5
number of intervals :   4
interval of length   from     to    number of entries
                 1     17     22                   72
                 2     23     27                  133
                 3     28     32                   48
                 4     33     37                    1
total number of entries                       :   254

-->Statistic_taxonomy of GPILib 1 / total number of entries 254
   254 ..Fungi

-->Switch_Off_Tax: number of entries before procedure : 254
-->Flags of all entries except Fungi switched off
-->Switch_Off_Tax: number of entries after procedure : 254

-->Switch_Off_Len: number of entries before procedure : 254
   AAC35942	1 X00009  33 AAAGLTVPSLTMAPVVVGAVTLLSTVFGAGLVLL
-->Flags of all entries with AALen-GPIPos > 32 switched off
-->Flags of all entries with AALen-GPIPos < 17 switched off
-->Switch_Off_Len: number of entries after procedure : 253

possible largest subset found: Q =  233
possible largest subset found: Q =  227
possible largest subset found: Q =  222
possible largest subset found: Q =  216
possible largest subset found: Q =  206
possible largest subset found: Q =  192
largest subset found: q = 192
number of 0's in found largest subset: 0
-->Mean and Dispersion of property  at position(s) -1 
   number of selected entries: 192
   Mean : 113.526042
   Dispersion:  29.214015
-->Mean and Dispersion of property  at position(s) 0 
   number of selected entries: 192
   Mean : 94.903125
   Dispersion:  23.481105
-->Mean and Dispersion of property  at position(s) 1 
   number of selected entries: 192
   Mean : 90.171354
   Dispersion:  23.465112
-->Mean and Dispersion of property  at position(s) 2 
   number of selected entries: 192
   Mean : 88.003125
   Dispersion:  16.411345
-->Mean and Dispersion of property  at position(s) -1 0 
   number of selected entries: 192
   Mean : 208.429167
   Dispersion:  39.603300
   Fisher criterion F = 0.895691
-->Mean and Dispersion of property  at position(s) -1 1 
   number of selected entries: 192
   Mean : 203.697396
   Dispersion:  36.772152
   Fisher criterion F = 1.038367
-->Mean and Dispersion of property  at position(s) -1 2 
   number of selected entries: 192
   Mean : 201.529167
   Dispersion:  32.131847
   Fisher criterion F = 1.087496
-->Mean and Dispersion of property  at position(s) 0 1 
   number of selected entries: 192
   Mean : 185.074479
   Dispersion:  31.224105
   Fisher criterion F = 1.130294
-->Mean and Dispersion of property  at position(s) 0 2 
   number of selected entries: 192
   Mean : 182.906250
   Dispersion:  27.507278
   Fisher criterion F = 1.084642
-->Mean and Dispersion of property  at position(s) 1 2 
   number of selected entries: 192
   Mean : 178.174479
   Dispersion:  26.730564
   Fisher criterion F = 1.147540
-->Mean and Dispersion of property  at position(s) -1 0 1 
   number of selected entries: 192
   Mean : 298.600521
   Dispersion:  44.046847
   Fisher criterion F = 1.007890
-->Mean and Dispersion of property  at position(s) -1 0 2 
   number of selected entries: 192
   Mean : 296.432292
   Dispersion:  41.028941
   Fisher criterion F = 0.994522
-->Mean and Dispersion of property  at position(s) -1 1 2 
   number of selected entries: 192
   Mean : 291.700521
   Dispersion:  37.759335
   Fisher criterion F = 1.173685
-->Mean and Dispersion of property  at position(s) 0 1 2 
   number of selected entries: 192
   Mean : 273.077604
   Dispersion:  32.784327
   Fisher criterion F = 1.275856
-->Mean and Dispersion of property  at position(s) -1 0 1 2 
   number of selected entries: 192
   Mean : 386.603646
   Dispersion:  44.154918
   Fisher criterion F = 1.141106
-->Mean and Dispersion of property  at position(s) 3 
   number of selected entries: 192
   Mean : 123.878646
   Dispersion:  36.412782
-->Mean and Dispersion of property  at position(s) 4 
   number of selected entries: 192
   Mean : 134.448437
   Dispersion:  39.682025
-->Mean and Dispersion of property  at position(s) 5 
   number of selected entries: 192
   Mean : 140.414062
   Dispersion:  38.651105
-->Mean and Dispersion of property  at position(s) 6 
   number of selected entries: 192
   Mean : 129.755729
   Dispersion:  38.407907
-->Mean and Dispersion of property  at position(s) 7 
   number of selected entries: 192
   Mean : 127.479167
   Dispersion:  37.413449
-->Mean and Dispersion of property  at position(s) 8 
   number of selected entries: 192
   Mean : 122.914583
   Dispersion:  40.288408
-->Mean and Dispersion of property  at position(s) 3 4 5 6 7 8 
   number of selected entries: 192
   Mean : 778.890625
   Dispersion:  97.320968
   Fisher criterion F = 0.938887



Last modified: 11th August 2003