DOUTfinder results (result-link)
Domain ranking
Analysis based on a 80% non-redundant protein set composed of 19 sequences
| Subsignificant domain hits | |||
|---|---|---|---|
| Probable domain homologs | |||
| Acetyltransf_1 D=233.6 | PF00583 CDD|25558 Acyltransferase | 9 sub 9 prot | Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions... |
| Other domains appearing more than once | |||
| ZnF_C2H2 | SM00355 CDD|14973 | 5 sub 5 prot | zinc finger; .... |
| Domain (hitnumber): DUF738 (2), | |||
- » Multiple clan-members of the following clans are found in the set:
Acyltransferase: DUF738 Acetyltransf_1
Details
- » Html tabular summary
of the identified domain hits (proteins, E-values, scores, positions, coverage). - » Simple text
rps-blast results for the non-redundant masked input set. - » Fasta formated
non-redundant masked sequence set. - » Fasta formated
input sequence set.
Visualization
Significant domain hits:
- » Significant- solid red boxes with E < 0.01
- » Supported by a significant hit in the protein set (orange)
- » Probable distant domain homolog with 5% expected false positives (blue)
- » Potential similarity with 10% expected false positives (cyan)
RPS-BLAST 2.2.13 [Nov-27-2005]
Database=PSSMs from the Pfam-A seed alignment database (Jan 2006) derived from NCBI
| Found once ZM | |
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| Found once Transketolase_C | |
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| Found once FTP | |
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| Found once ICln_channel | |
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| Found once Int_alpha | |
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| Found once HTH_XRE | |
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| Found once IL2 | |
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| Probable Acetyltransf_1 | |
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| Found once CheW | |
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| Found once Sigma70_r4 | |
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| Found once RolB_RolC | |
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| Appears 5 ZnF_C2H2 | |
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| Probable Acetyltransf_1 | |
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| Found once Pox_A12 | |
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| Found once C1 | |
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| Found once CASH | |
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| Found once CLa | |
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| Appears 5 ZnF_C2H2 | |
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| Probable Acetyltransf_1 | |
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| Found once CLECT | |
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| Found once HATPase_c | |
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| Found once HTH_ASNC | |
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| Appears 5 ZnF_C2H2 | |
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| Found once MADS | |
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| Found once DUF1304 | |
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| Appears 2 DUF738 | |
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| Found once PKD | |
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| Found once GGL | |
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| Found once FYVE | |
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| Found once CCP | |
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| Probable Acetyltransf_1 | |
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| Appears 5 ZnF_C2H2 | |
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| Found once CARP | |
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| Found once RPOL9 | |
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| Probable Acetyltransf_1 | |
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| Found once BIR | |
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| Found once TOPRIM | |
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| Probable Acetyltransf_1 | |
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| Appears 5 ZnF_C2H2 | |
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| Found once ZnF_U1 | |
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| Found once HintC | |
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| Found once PHD | |
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| Found once GvpK | |
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| Probable Acetyltransf_1 | |
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| Found once DNA_pol3_beta_2 | |
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| Found once FokI_C | |
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| Found once Fumerase_C | |
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| Found once ParB | |
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| Found once HMG | |
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| Found once RPOL9 | |
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| Found once Ku78 | |
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| Probable Acetyltransf_1 | |
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| Appears 2 DUF738 | |
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| Found once PolyA | |
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| Found once Ubox | |
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| Found once PsbW | |
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| Probable Acetyltransf_1 | |
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