BLASTP 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= consensus (201 letters) Database: nr95_Pfam18 2,959,546 sequences; 830,037,145 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor... 324 8e-88 gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmone... 318 4e-86 DUF949_Q83M88_30-229_PF06104.2 317 1e-85 gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia p... 285 4e-76 DUF949_Q66E07_28-227_PF06104.2 281 6e-75 gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia c... 265 5e-70 gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesor... 264 1e-69 DUF949_Q98FX6_1-193_PF06104.2 262 5e-69 DUF949_Q6D1H5_32-231_PF06104.2 261 5e-69 gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [M... 261 6e-69 DUF949_Q92JZ0_45-245_PF06104.2 260 1e-68 gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizob... 260 1e-68 gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melite... 257 1e-67 DUF949_Q8YJP4_41-241_PF06104.2 255 4e-67 DUF949_Q7CSY6_66-266_PF06104.2 247 1e-64 gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Brady... 245 4e-64 gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefacien... 245 6e-64 gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Barto... 243 1e-63 gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella qui... 243 2e-63 gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photo... 242 4e-63 gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodo... 240 1e-62 gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [M... 240 2e-62 gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefacien... 240 2e-62 gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salm... 239 2e-62 DUF949_Q6G1P2_42-242_PF06104.2 239 3e-62 DUF949_Q7N7F5_31-231_PF06104.2 239 3e-62 DUF949_Q89XW3_52-252_PF06104.2 239 4e-62 DUF949_Q6G1H8_42-242_PF06104.2 239 4e-62 gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitr... 238 5e-62 DUF949_Q57JI8_39-239_PF06104.2 237 2e-61 DUF949_Q7CS68_57-257_PF06104.2 236 4e-61 gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF94... 231 8e-60 gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein ... 227 2e-58 gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein ... 205 6e-52 gi|54297427|ref|YP_123796.1| Legionella secretion system protein... 100 3e-20 DUF949_Q60B45_95-280_PF06104.2 98 1e-19 DUF949_Q83XL8_75-191_PF06104.2 96 4e-19 gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methy... 96 4e-19 DUF949_Q6LJZ6_66-236_PF06104.2 95 8e-19 gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Pho... 95 1e-18 gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella bur... 83 4e-15 DUF949_Q83CG1_72-171_PF06104.2 72 7e-12 gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 71 1e-11 gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 66 5e-10 gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesor... 65 7e-10 ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 65 1e-09 gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 64 3e-09 gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 62 8e-09 gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein ... 60 3e-08 gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Ery... 60 4e-08 gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 59 5e-08 gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdello... 59 5e-08 gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 59 6e-08 gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 59 7e-08 gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 59 1e-07 gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protei... 58 2e-07 ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 57 2e-07 gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia s... 57 2e-07 gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] 57 4e-07 gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulf... 57 4e-07 ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 56 7e-07 ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 55 7e-07 gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein ... 55 7e-07 gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdello... 55 8e-07 gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein ... 54 2e-06 gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 54 2e-06 ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 54 3e-06 ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 54 3e-06 ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 53 5e-06 gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pse... 53 5e-06 gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudo... 53 5e-06 gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein ... 52 6e-06 gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 52 6e-06 ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 52 7e-06 gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [S... 52 9e-06 gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella b... 51 2e-05 gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 50 5e-05 gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 49 5e-05 gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted p... 49 5e-05 gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseu... 49 1e-04 gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylo... 47 2e-04 gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella a... 47 3e-04 gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted p... 47 4e-04 gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 46 5e-04 gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella d... 46 6e-04 gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein ... 45 8e-04 gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewan... 45 9e-04 gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibri... 45 0.001 gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella f... 45 0.001 gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 45 0.001 gi|37675934|ref|NP_936330.1| uncharacterized protein conserved i... 45 0.001 ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 44 0.002 ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 44 0.002 ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 44 0.003 gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquife... 44 0.003 gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdello... 44 0.003 gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein ... 43 0.004 gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibri... 43 0.004 ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 42 0.007 gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovi... 42 0.007 gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protei... 40 0.027 gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protei... 40 0.029 gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted p... 40 0.036 gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_20... 39 0.065 gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 39 0.077 gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [T... 38 0.13 gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legio... 38 0.14 gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax f... 37 0.24 gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Woli... 37 0.24 gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein ... 37 0.31 gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 37 0.31 >gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor [Escherichia coli CFT073] Length = 246 Score = 324 bits (831), Expect = 8e-88 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 30 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 88 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 89 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 148 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 149 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 208 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 209 RKPPTVSVVNGRYVVSKPLSH 229 >gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica serovar Typhi Ty2] Length = 246 Score = 318 bits (816), Expect = 4e-86 Identities = 158/198 (79%), Positives = 171/198 (86%), Gaps = 1/198 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 KE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY IC +SGGLGPKRR+GDF+S Sbjct: 33 KEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKS 91 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFYSVQ NQL PDSR+Y AINIGFPNAYDRAHGY GKYLMIHGACVSVGCYAMTD+ I Sbjct: 92 PEGFYSVQRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGI 151 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 DEIF FV A V GQPSVQVSIYPFRMTDANMQRH+ S DFW QLKPGYDYFEQT KP Sbjct: 152 DEIFQFVTAALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKP 211 Query: 184 PTVSVCNGRYVFSKPLSH 201 PTVS+ +GRYV SKPLSH Sbjct: 212 PTVSIVDGRYVVSKPLSH 229 >DUF949_Q83M88_30-229_PF06104.2 Length = 200 Score = 317 bits (812), Expect = 1e-85 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 1 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 60 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 120 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 179 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 180 RKPPTVSVANGRYVVSKPLSH 200 >gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Medievalis str. 91001] Length = 250 Score = 285 bits (730), Expect = 4e-76 Identities = 136/197 (69%), Positives = 163/197 (82%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 33 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFY + L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 92 KSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 151 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ N+QRHRNS +FW+QL+PGY YF + R Sbjct: 152 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNR 211 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 212 MPPPVSVSNGQYVLSPP 228 >DUF949_Q66E07_28-227_PF06104.2 Length = 200 Score = 281 bits (720), Expect = 6e-75 Identities = 138/197 (70%), Positives = 164/197 (83%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 2 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFYS+ L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 61 KSPEGFYSINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 120 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ NMQRHRNS +FW+QL+PGY YF + R Sbjct: 121 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNR 180 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 181 MPPPVSVSNGQYVLSPP 197 >gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 244 Score = 265 bits (677), Expect = 5e-70 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ AK+G EY+L++ YPICK+SGGLGPKR EGD Sbjct: 32 PIAKELKQQLLGSPIYIQIFKEERIFELY-AKVGNEYRLLEQYPICKYSGGLGPKRVEGD 90 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 91 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 150 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 151 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 210 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 211 NQPPAITVFNGQYVVNPPL 229 >gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099] Length = 395 Score = 264 bits (674), Expect = 1e-69 Identities = 122/185 (65%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S V RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 5 SSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRP 64 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +Q+NP S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RD Sbjct: 65 SQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRD 124 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC R Sbjct: 125 AFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKR 184 Query: 193 YVFSK 197 YVF++ Sbjct: 185 YVFNQ 189 >DUF949_Q98FX6_1-193_PF06104.2 Length = 193 Score = 262 bits (669), Expect = 5e-69 Identities = 122/185 (65%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S V RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 5 SSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRP 64 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +Q+NP S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RD Sbjct: 65 SQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRD 124 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC R Sbjct: 125 AFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKR 184 Query: 193 YVFSK 197 YVF++ Sbjct: 185 YVFNQ 189 >DUF949_Q6D1H5_32-231_PF06104.2 Length = 200 Score = 261 bits (668), Expect = 5e-69 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ AK+G EY+L++ YPICK+SGGLGPKR EGD Sbjct: 1 PIAKELKQQLLGSPIYIQIFKEERIFELY-AKVGNEYRLLEQYPICKYSGGLGPKRVEGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 60 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 120 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 179 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 180 NQPPAITVFNGQYVVNPPL 198 >gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 439 Score = 261 bits (668), Expect = 6e-69 Identities = 115/185 (62%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +P+ +R+FKEE LE+WK K G Y L+KSY ICKWSG LGPK EGD Q+PEGFY+++P Sbjct: 61 APIMMRVFKEEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAPEGFYTIRP 120 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP+S Y+L+ NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q++EI+AF RD Sbjct: 121 QQMNPNSSYHLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVEEIYAFARD 180 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ + Q +PFRMT NM R+RN PNY FW+ LK GYD+FE T+ PP V VC R Sbjct: 181 AFRGGQEAFQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPPKVDVCEAR 240 Query: 193 YVFSK 197 YVF++ Sbjct: 241 YVFNR 245 >DUF949_Q92JZ0_45-245_PF06104.2 Length = 201 Score = 260 bits (665), Expect = 1e-68 Identities = 117/185 (63%), Positives = 144/185 (77%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY + P Sbjct: 13 SPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFYPLYP 72 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 NQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA RD Sbjct: 73 NQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFALARD 132 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+VC + Sbjct: 133 AFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNVCERK 192 Query: 193 YVFSK 197 YVF++ Sbjct: 193 YVFNQ 197 >gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizobium meliloti] Length = 480 Score = 260 bits (665), Expect = 1e-68 Identities = 117/185 (63%), Positives = 144/185 (77%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY + P Sbjct: 57 SPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFYPLYP 116 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 NQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA RD Sbjct: 117 NQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFALARD 176 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+VC + Sbjct: 177 AFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNVCERK 236 Query: 193 YVFSK 197 YVF++ Sbjct: 237 YVFNQ 241 >gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melitensis 16M] Length = 403 Score = 257 bits (656), Expect = 1e-67 Identities = 121/186 (65%), Positives = 142/186 (76%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 53 SPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRP 112 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ EI+AF RD Sbjct: 113 AQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRD 172 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP V VC R Sbjct: 173 AFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKR 232 Query: 193 YVFSKP 198 YVF+ P Sbjct: 233 YVFNVP 238 >DUF949_Q8YJP4_41-241_PF06104.2 Length = 201 Score = 255 bits (652), Expect = 4e-67 Identities = 121/186 (65%), Positives = 142/186 (76%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 13 SPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRP 72 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ EI+AF RD Sbjct: 73 AQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRD 132 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP V VC R Sbjct: 133 AFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKR 192 Query: 193 YVFSKP 198 YVF+ P Sbjct: 193 YVFNVP 198 >DUF949_Q7CSY6_66-266_PF06104.2 Length = 201 Score = 247 bits (631), Expect = 1e-64 Identities = 113/185 (61%), Positives = 138/185 (74%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PEGFY++ P Sbjct: 13 SPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFYNLTP 72 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI EI+ F RD Sbjct: 73 AHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFARD 132 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP V+VC + Sbjct: 133 AFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVNVCEKK 192 Query: 193 YVFSK 197 YVF++ Sbjct: 193 YVFNQ 197 >gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110] Length = 526 Score = 245 bits (626), Expect = 4e-64 Identities = 108/194 (55%), Positives = 142/194 (73%), Gaps = 3/194 (1%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 V K++ Q SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Sbjct: 56 VEKDMDLQ---SPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDR 112 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD Sbjct: 113 QAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDE 172 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR Sbjct: 173 QIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTR 232 Query: 182 KPPTVSVCNGRYVF 195 + P V C +YVF Sbjct: 233 QEPKVDFCEKKYVF 246 >gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefaciens str. C58] Length = 452 Score = 245 bits (625), Expect = 6e-64 Identities = 113/185 (61%), Positives = 138/185 (74%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PEGFY++ P Sbjct: 78 SPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFYNLTP 137 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI EI+ F RD Sbjct: 138 AHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFARD 197 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP V+VC + Sbjct: 198 AFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVNVCEKK 257 Query: 193 YVFSK 197 YVF++ Sbjct: 258 YVFNQ 262 >gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] Length = 247 Score = 243 bits (621), Expect = 1e-63 Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + LI Y ICKWSG LGP Sbjct: 36 PLPREVQNRMVLYNVDPYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGDFQ+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S G Sbjct: 96 KYKEGDFQTPEGFYTISASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+M+D + +I+AF RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GY Sbjct: 156 CYSMSDKNMAQIYAFARDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D FE+ RKPPTV V RYVF+ Sbjct: 216 DLFEKNRKPPTVDVYEKRYVFN 237 >gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 247 Score = 243 bits (621), Expect = 2e-63 Identities = 110/202 (54%), Positives = 142/202 (70%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGP Sbjct: 36 PLPQEVQNKMVLHNIDPYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGD Q+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVG Sbjct: 96 KYKEGDLQTPEGFYTISADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAM D + +I+AF RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GY Sbjct: 156 CYAMGDKNMAQIYAFARDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D+FE+ RKPPTV V RYVFS Sbjct: 216 DFFEENRKPPTVDVYKKRYVFS 237 >gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 242 bits (618), Expect = 4e-63 Identities = 114/184 (61%), Positives = 141/184 (76%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 41 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 101 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 160 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 161 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 220 Query: 191 GRYV 194 G+YV Sbjct: 221 GQYV 224 >gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009] Length = 491 Score = 240 bits (613), Expect = 1e-62 Identities = 107/183 (58%), Positives = 136/183 (74%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +R+FK+E +LE+WK G +QL+KSYPIC+WSG LGPK REGD Q+PEGFYS+ P Sbjct: 72 SPILVRLFKQEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISP 131 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S GCYAMTD QI EI+A R+ Sbjct: 132 GQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRE 191 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 +F GGQ + Q+ YPF+MT N +HRN+PN FWK LK GYD+FE TR+ P V C + Sbjct: 192 SFFGGQRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHK 251 Query: 193 YVF 195 YVF Sbjct: 252 YVF 254 >gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 335 Score = 240 bits (612), Expect = 2e-62 Identities = 105/191 (54%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P +PV +RIFK+E +LE+WK G++ L+K+YP+C+WSG LGPK++ GD Q+PEG Sbjct: 47 KSMSPSAPVLVRIFKQESELEVWKRDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEG 106 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YYL+ N+G+PN + A GYTG+ LM+HGAC S GC+A+TD + EI Sbjct: 107 FYHVSARMLNPNSQYYLSFNLGYPNRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEI 166 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R+A GGQ S QV +PFRMT NM ++RN PN+ FW LK GYD FE TR+ P V Sbjct: 167 YAVAREALKGGQGSFQVQAFPFRMTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKV 226 Query: 187 SVCNGRYVFSK 197 S C GRYVF + Sbjct: 227 SYCEGRYVFDR 237 >gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefaciens str. C58] Length = 351 Score = 240 bits (612), Expect = 2e-62 Identities = 110/190 (57%), Positives = 135/190 (71%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+PEG Sbjct: 63 KSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAPEG 122 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ EI Sbjct: 123 FYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGEI 182 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P V Sbjct: 183 YAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQPKV 242 Query: 187 SVCNGRYVFS 196 SVC RYVF+ Sbjct: 243 SVCGRRYVFN 252 >gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella typhimurium LT2] Length = 239 Score = 239 bits (611), Expect = 2e-62 Identities = 111/196 (56%), Positives = 141/196 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 39 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 98 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 99 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 158 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 159 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 218 Query: 181 RKPPTVSVCNGRYVFS 196 R+ PT++V N RY S Sbjct: 219 RRLPTITVENRRYKIS 234 >DUF949_Q6G1P2_42-242_PF06104.2 Length = 201 Score = 239 bits (610), Expect = 3e-62 Identities = 109/186 (58%), Positives = 136/186 (73%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + LI Y ICKWSG LGPK +EGDFQ+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S GCY+M+D + +I+AF Sbjct: 71 SASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GYD FE+ RKPPTV V Sbjct: 131 RDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYE 190 Query: 191 GRYVFS 196 RYVF+ Sbjct: 191 KRYVFN 196 >DUF949_Q7N7F5_31-231_PF06104.2 Length = 201 Score = 239 bits (610), Expect = 3e-62 Identities = 114/184 (61%), Positives = 141/184 (76%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 11 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 71 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 131 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 190 Query: 191 GRYV 194 G+YV Sbjct: 191 GQYV 194 >DUF949_Q89XW3_52-252_PF06104.2 Length = 201 Score = 239 bits (609), Expect = 4e-62 Identities = 108/194 (55%), Positives = 142/194 (73%), Gaps = 3/194 (1%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 V K++ Q SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Sbjct: 5 VEKDMDLQ---SPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDR 61 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD Sbjct: 62 QAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDE 121 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR Sbjct: 122 QIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTR 181 Query: 182 KPPTVSVCNGRYVF 195 + P V C +YVF Sbjct: 182 QEPKVDFCEKKYVF 195 >DUF949_Q6G1H8_42-242_PF06104.2 Length = 201 Score = 239 bits (609), Expect = 4e-62 Identities = 108/186 (58%), Positives = 134/186 (72%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGPK +EGD Q+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVGCYAM D + +I+AF Sbjct: 71 SADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GYD+FE+ RKPPTV V Sbjct: 131 RDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYK 190 Query: 191 GRYVFS 196 RYVFS Sbjct: 191 KRYVFS 196 >gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255] Length = 492 Score = 238 bits (608), Expect = 5e-62 Identities = 106/183 (57%), Positives = 137/183 (74%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ IR+FK+E +LE+WK G++ L+KSYPIC+WSG LGPK REGD Q+PEGFYS+ P Sbjct: 59 SPILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGPKTREGDRQAPEGFYSITP 118 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYL+ N G+PN +D++ G TG LM+HG C S GCYAMTD QI EI+A R+ Sbjct: 119 AQMNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRE 178 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 +F GGQ + Q+ YPFRMT AN+ +HRN+PN FWK +K G D+FE TR+ P V+ C + Sbjct: 179 SFFGGQRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCERK 238 Query: 193 YVF 195 YVF Sbjct: 239 YVF 241 >DUF949_Q57JI8_39-239_PF06104.2 Length = 201 Score = 237 bits (604), Expect = 2e-61 Identities = 111/196 (56%), Positives = 141/196 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 1 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 61 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 120 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 121 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 180 Query: 181 RKPPTVSVCNGRYVFS 196 R+ PT++V N RY S Sbjct: 181 RRLPTITVENRRYKIS 196 >DUF949_Q7CS68_57-257_PF06104.2 Length = 201 Score = 236 bits (601), Expect = 4e-61 Identities = 110/190 (57%), Positives = 135/190 (71%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+PEG Sbjct: 7 KSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAPEG 66 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ EI Sbjct: 67 FYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGEI 126 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P V Sbjct: 127 YAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQPKV 186 Query: 187 SVCNGRYVFS 196 SVC RYVF+ Sbjct: 187 SVCGRRYVFN 196 >gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14] Length = 502 Score = 231 bits (589), Expect = 8e-60 Identities = 103/183 (56%), Positives = 133/183 (72%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ IR+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Q+PEGFYS+ P Sbjct: 74 SPILIRLFKQEAELEVWKQNRSGKFALLKTYPICRWSGDLGPKTREGDRQAPEGFYSISP 133 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S GCYAMTD QI EI+A R+ Sbjct: 134 AQMNPRSAYYLSFNTGYPNAFDKSLGRTGSELMVHGDCSSRGCYAMTDEQIAEIYALGRE 193 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 +F GGQ + Q YPF MT N+ +HRN+PN FWK +K G D+FE T + P V C + Sbjct: 194 SFFGGQHAFQFQAYPFHMTPVNLAKHRNNPNMPFWKMIKEGSDHFEVTHQAPKVEFCEHK 253 Query: 193 YVF 195 YVF Sbjct: 254 YVF 256 >gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 238 Score = 227 bits (578), Expect = 2e-58 Identities = 101/187 (54%), Positives = 135/187 (72%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+P++IRIFK+ LE+W G ++L K+Y IC SG LGPK R GD Q+PEGFY V Sbjct: 52 GAPIFIRIFKQSATLEVWLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQAPEGFYFVN 111 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 + NP S+++L+ N+G+PNAYDRAHG TG LM+HG CVS+GCYAMTD+ I+EI+A + Sbjct: 112 AQRFNPWSKFHLSFNLGYPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGIEEIYALAQ 171 Query: 132 DAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNG 191 + GQP +V I+PFR++D ++R +N+ Y FW LK G+DYFEQT+ PP V+V N Sbjct: 172 KSLEDGQPFFRVHIFPFRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMPPNVNVQNK 231 Query: 192 RYVFSKP 198 RYVFS P Sbjct: 232 RYVFSAP 238 >gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 205 bits (521), Expect = 6e-52 Identities = 90/167 (53%), Positives = 121/167 (72%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIG 88 ++A+ G Y L+K+YPI +WS LGPK ++GD Q+PEGFY++ P Q+NP+S YYL+ ++G Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62 Query: 89 FPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 +PNA DRA G TG Y+M+HG C S GC+AMTDA + EI+A R+AF GGQ + Q YPF Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNGGQRAFQFQSYPF 122 Query: 149 RMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVF 195 RMT AN+ + RN PN FW+ LK G DYFE ++ P V+ C +YVF Sbjct: 123 RMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169 >gi|54297427|ref|YP_123796.1| Legionella secretion system protein A [Legionella pneumophila str. Paris] Length = 243 Score = 100 bits (248), Expect = 3e-20 Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 20/183 (10%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P + + FK ERK+ELW E+ I YP+ +SG LGPK RE D Q PEG Y + Sbjct: 66 PPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKL 125 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGCYAMTDAQID 124 NP S +L++ I +PN++DR GY G + IHG +SVGC A+ D ID Sbjct: 126 V--NFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAID 183 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS----PNY--DFWKQLKPGYDYFE 178 ++F R G ++QV I P D Q+ S P + + +KQ+ F+ Sbjct: 184 QLFILARRV---GLKNIQVIIAP---NDLRYQKPSTSTFAQPRWLPELYKQISESLKPFK 237 Query: 179 QTR 181 +T+ Sbjct: 238 KTK 240 >DUF949_Q60B45_95-280_PF06104.2 Length = 186 Score = 98.2 bits (243), Expect = 1e-19 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 12/144 (8%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 P V + K+E+KLELW A+ G +Y+LI+ Y I SG GPK R+GD Q PEG Y Sbjct: 10 FPPREVVLVGLKQEKKLELW-ARDGSDYRLIRHYDIQAASGSAGPKLRQGDKQVPEGVYR 68 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAH----GYT--GKYLMIHGACVSVGCYAMTDAQI 123 + LNP+S Y+L++ + +PN +D H G T G + IHG VS GC AM D I Sbjct: 69 IV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAGCLAMGDEAI 126 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 +E+F G+ +V+V I P Sbjct: 127 EELFVLTAQV---GKENVKVVIAP 147 >DUF949_Q83XL8_75-191_PF06104.2 Length = 117 Score = 96.3 bits (238), Expect = 4e-19 Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 8/118 (6%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS 79 FK ERK+ELW E+ I YP+ +SG LGPK RE D Q PEG Y + NP S Sbjct: 1 FKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NFNPFS 58 Query: 80 RYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 +L++ I +PN++DR GY G + IHG +SVGC A+ D ID++F R Sbjct: 59 SMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILAR 116 >gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath] Length = 292 Score = 96.3 bits (238), Expect = 4e-19 Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 12/144 (8%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 P V + K+E+KLELW A+ G +Y+LI+ Y I SG GPK R+GD Q PEG Y Sbjct: 104 FPPREVVLVGLKQEKKLELW-ARDGSDYRLIRHYDIQAASGSAGPKLRQGDKQVPEGVYR 162 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGCYAMTDAQI 123 + LNP+S Y+L++ + +PN +D H G + IHG VS GC AM D I Sbjct: 163 IV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAGCLAMGDEAI 220 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 +E+F G+ +V+V I P Sbjct: 221 EELFVLTAQV---GKENVKVVIAP 241 >DUF949_Q6LJZ6_66-236_PF06104.2 Length = 171 Score = 95.1 bits (235), Expect = 8e-19 Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 12/145 (8%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q P + + KEE ++ELW AK G + IK Y I K SG GPK REGD Q PEG Y Sbjct: 9 QYPPEQIAMFALKEEMQVELW-AKDGEAWVYIKRYDIAKISGKSGPKLREGDHQVPEGIY 67 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGCYAMTDAQ 122 V LNP+S+Y+L++ + +PN +D + G + IHG SVGC AM D Sbjct: 68 QVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGCLAMGDIA 125 Query: 123 IDEIFAFVRDAFVGGQPSVQVSIYP 147 I+E+F V A + +VQV I P Sbjct: 126 IEELFLLVERAQI---QNVQVVISP 147 >gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] Length = 246 Score = 94.7 bits (234), Expect = 1e-18 Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 12/145 (8%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q P + + KEE ++ELW AK G + IK Y I K SG GPK REGD Q PEG Y Sbjct: 74 QYPPEQIAMFALKEEMQVELW-AKDGEAWVYIKRYDIAKISGKSGPKLREGDHQVPEGIY 132 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGCYAMTDAQ 122 V LNP+S+Y+L++ + +PN +D + G + IHG SVGC AM D Sbjct: 133 QVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGCLAMGDIA 190 Query: 123 IDEIFAFVRDAFVGGQPSVQVSIYP 147 I+E+F V A + +VQV I P Sbjct: 191 IEELFLLVERAQI---QNVQVVISP 212 >gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella burnetii RSA 493] Length = 233 Score = 83.2 bits (204), Expect = 4e-15 Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K P + + +FK +++LW AK G ++ I+S+PI SGG GPK +GD Sbjct: 54 PYFKRAGVSYPPKDISLLVFKNSHRVQLW-AKDRGPWRYIRSFPILASSGGPGPKLHDGD 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + NP SR+ L++ + +PN+ DR + G + IHG+ S+G Sbjct: 113 HQVPEGVYKIV--GFNPASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIG 170 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C + + I+++F A++ G+ ++V I P Sbjct: 171 CIPIGNKAIEQLFVL---AYLVGERHIKVIIAP 200 >DUF949_Q83CG1_72-171_PF06104.2 Length = 100 Score = 72.0 bits (175), Expect = 7e-12 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 9/103 (8%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 +FK +++LW AK G ++ I+S+PI SGG GPK +GD Q PEG Y + NP Sbjct: 1 VFKNSHRVQLW-AKDRGPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPA 57 Query: 79 SRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGC 115 SR+ L++ + +PN+ DR + G + IHG+ S+GC Sbjct: 58 SRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGC 100 >gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 171 Score = 71.2 bits (173), Expect = 1e-11 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 30/152 (19%) Query: 12 GSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ I + K +RK+ L K +++KSY + + GPK+ EGD ++PEG Y + Sbjct: 34 GPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDGRTPEGMYFI 88 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHG----------ACVSVGC 115 ++ NP SRY+L++ I +P+A D A G + IHG A + GC Sbjct: 89 --DRFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRALNRADWTAGC 146 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 A+TD +I+EIF +R P V + IYP Sbjct: 147 IAVTDEEIEEIFTMLR-------PGVPIFIYP 171 >gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 213 Score = 66.2 bits (160), Expect = 5e-10 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 19/112 (16%) Query: 39 LIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG 98 ++K+Y I + LG K+ EGD ++PEG Y + ++ NPDSRY+L+I I +PN +D Sbjct: 97 VLKAYRIGLGNEPLGHKQFEGDGKTPEGLYYI--DRRNPDSRYHLSIGISYPNPHDAVLA 154 Query: 99 -----YTGKYLMIHGACV------------SVGCYAMTDAQIDEIFAFVRDA 133 G + IHG + GC A+TDA++++I+A VRD Sbjct: 155 SELGRSAGSDIFIHGQGPEGRALSRLRQDWTAGCIAVTDAEVEDIYAMVRDG 206 >gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099] Length = 163 Score = 65.5 bits (158), Expect = 7e-10 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + + N Sbjct: 28 VRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML--DWRN 80 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACVSV--------------GCYA 117 P+S + +I+I +PNA D A G +MIHG GC A Sbjct: 81 PNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCIA 140 Query: 118 MTDAQIDEIFAFVRDA 133 +TD+ +DEI+A V D Sbjct: 141 VTDSDMDEIWAMVADG 156 >ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 Length = 139 Score = 65.1 bits (157), Expect = 1e-09 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + + N Sbjct: 6 VRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML--DWRN 58 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACVSV--------------GCYA 117 P+S + +I+I +PNA D A G +MIHG GC A Sbjct: 59 PNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCIA 118 Query: 118 MTDAQIDEIFAFVRDA 133 +TD+ +DEI+A V D Sbjct: 119 VTDSDMDEIWAMVADG 134 >gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 175 Score = 63.5 bits (153), Expect = 3e-09 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + ++K +R LEL + LI+SY + +GPK R GDF++PEG Y + L Sbjct: 40 VVVYKSKRLLELRSGQ-----NLIRSYRVALGRNPVGPKVRAGDFRTPEGIYRLDRRSLQ 94 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGACV--------------SVGCYA 117 SR++ +I+I +PN D R G + G +MIHG + GC A Sbjct: 95 --SRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFDWTKGCIA 152 Query: 118 MTDAQIDEIFAFVRDA 133 +T+A++ EI+ VR+ Sbjct: 153 VTNAEMTEIWHLVRNG 168 >gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 334 Score = 62.0 bits (149), Expect = 8e-09 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 26/134 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I K +R+L L+ + +KSY I GPK REGD ++PEG Y + + N Sbjct: 199 ILIEKGDRRLTLFSRN-----EALKSYRIALGGAPSGPKEREGDNKTPEGAYVI--DSKN 251 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHG--------------ACVSVGCYA 117 +S+Y+L+++I +PN D+ G +MIHG A + GC A Sbjct: 252 GNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTRGCVA 311 Query: 118 MTDAQIDEIFAFVR 131 ++D +I+EI+ V+ Sbjct: 312 VSDEEIEEIYKLVQ 325 >gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 167 Score = 60.1 bits (144), Expect = 3e-08 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 18/98 (18%) Query: 52 LGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMI 106 LG KR EGD ++PEG Y + + N S Y+L+++I +P+A DRA+ G + I Sbjct: 65 LGHKRFEGDERTPEGRYVI--DHGNARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFI 122 Query: 107 HGACVSV-----------GCYAMTDAQIDEIFAFVRDA 133 HG S+ GC A+++A+IDEI+A V D Sbjct: 123 HGQPNSLASGRIEGDWTDGCIALSNAEIDEIWALVGDG 160 >gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Erythrobacter litoralis HTCC2594] Length = 169 Score = 59.7 bits (143), Expect = 4e-08 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 18/98 (18%) Query: 52 LGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMI 106 LG KR EGD ++PEG Y++ + NP+S YYL++ + +PNA DRA+ G + + Sbjct: 67 LGHKRFEGDERTPEGRYTI--DTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFL 124 Query: 107 HG-----------ACVSVGCYAMTDAQIDEIFAFVRDA 133 HG + GC A T+A++DE++ VRD Sbjct: 125 HGQPNWLPAGRMPGDWTDGCIAFTNAEMDELWRLVRDG 162 >gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 333 Score = 59.3 bits (142), Expect = 5e-08 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 39 LIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG 98 ++K+Y I +GPK R+GD ++PEG Y++ N DSRY+ A++I +PN DR Sbjct: 215 VLKTYRIALGGDPIGPKERQGDNKTPEGAYTIDAR--NRDSRYHRALHISYPNERDRKRA 272 Query: 99 YT-----GKYLMIHG------------ACV--SVGCYAMTDAQIDEI 126 G +MIHG A V + GC A+TD +I+EI Sbjct: 273 RELGVSPGGNIMIHGIKNGFSWVGDAHAGVDWTKGCIAVTDEEIEEI 319 >gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 59.3 bits (142), Expect = 5e-08 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K+ ++L L + GE L+K YP+ +G K+ EGD ++PEG YS+ + N Sbjct: 63 IVVSKDRKELYL----ISGE-TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSI--DYKN 115 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGACV----------------SVGC 115 P S+Y A+++ +PN D +A G + G +MIHG + GC Sbjct: 116 PQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQGC 175 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI++ V++ Sbjct: 176 VAVTNPEIEEIYSLVKE 192 >gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 172 Score = 59.3 bits (142), Expect = 6e-08 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ERKL L Q +KSY + GPKRREGD ++PEG Y + + + Sbjct: 37 ILVVKSERKLMLLSRG-----QPLKSYKVSLGKRPTGPKRREGDQRTPEGLYWIDWRKAS 91 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACV--------------SVGCYA 117 +Y L+++I +PN D+A G +M+HG + + GC A Sbjct: 92 --DKYNLSMHISYPNIRDQAQARAEGVPPGGMIMLHGTPLDENYPEWYFHGLDWTEGCIA 149 Query: 118 MTDAQIDEIFAFVRDA 133 M + I E+++ V+D Sbjct: 150 MRNDDIREVWSLVKDG 165 >gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 162 Score = 58.9 bits (141), Expect = 7e-08 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 27/142 (19%) Query: 12 GSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G PV I + K RK+ L E +++ Y + +G K+ EGD ++PEG Y + Sbjct: 21 GPPVTSIVVNKGSRKMYLLN-----ESKVLTEYKVGLGFAPVGHKQVEGDGRTPEGTYLI 75 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHG--------------ACV 111 ++ NP S++YL++ I +PN+ DRAH + G + IHG Sbjct: 76 --DRRNPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRRAARVRDW 133 Query: 112 SVGCYAMTDAQIDEIFAFVRDA 133 + GC A+T+ +I+EI++ V + Sbjct: 134 TAGCIAVTNDEIEEIWSMVNNG 155 >gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 140 Score = 58.5 bits (140), Expect = 1e-07 Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 20/130 (15%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K R++ L + + +++SY I +G K +EGD ++PEG Y++ ++ N Sbjct: 11 IVVYKSRREMLLLRGE-----SILRSYRIALGRDPIGHKFQEGDGRTPEGCYTI--DRRN 63 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHG--------ACVSVGCYAMTDAQI 123 P S+Y+L+++I +P A D R G G +MIHG + + GC A+++ ++ Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123 Query: 124 DEIFAFVRDA 133 DEI++ V D Sbjct: 124 DEIWSLVPDG 133 >gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protein conserved in bacteria [Psychrobacter cryohalolentis K5] Length = 187 Score = 57.8 bits (138), Expect = 2e-07 Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 28/147 (19%) Query: 5 ELKQQLPGSPVYIRIF--KEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 E KQ + + + ++F K R L+L + ++IKSY I +G K+++GD + Sbjct: 38 ENKQAMLNNIMIDKVFVDKSARTLQLLS-----DNKVIKSYHIALGGNPVGHKQQQGDKR 92 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHG--------A 109 +P G Y + + N S++Y +I++ +PNA D+A + G +MIHG A Sbjct: 93 TPTGSYIL--DYKNEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLA 150 Query: 110 CVSV------GCYAMTDAQIDEIFAFV 130 ++ GC A+TD ++DEI A V Sbjct: 151 AINQQRDWTDGCIAVTDNEMDEIMAAV 177 >ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 Length = 141 Score = 57.4 bits (137), Expect = 2e-07 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K+ ++L L + GE L+K YP+ +G K+ EGD ++PEG YS+ + N Sbjct: 6 IVVSKDRKELYL----ISGE-TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSI--DYKN 58 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGACV----------------SVGC 115 P S+Y A+++ +PN D +A G + G +MIHG + GC Sbjct: 59 PQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQGC 118 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI++ V++ Sbjct: 119 VAVTNPEIEEIYSLVKE 135 >gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] Length = 160 Score = 57.4 bits (137), Expect = 2e-07 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 27/144 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + ++K ER + L +++SY I G K EGD ++PEG Y + ++ N Sbjct: 31 VLVYKGERMMYLMHNN-----DVLESYEIELGFAPEGHKLEEGDGRTPEGEYMI--DRRN 83 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACV--------SVGCYAMTDAQI 123 P+S++YL+I I +PN D A G + IHG +VGC A+T+A++ Sbjct: 84 PNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNAEM 143 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 +I+A V + G P +SIYP Sbjct: 144 RQIYAMVEN----GTP---ISIYP 160 >gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] Length = 167 Score = 56.6 bits (135), Expect = 4e-07 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 26/143 (18%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 L G + + K ERKL L ++KSY + GPK EGD ++PEGFY Sbjct: 24 LEGKVDKVLVLKSERKLLLLNKG-----NVLKSYRVSLGKRPTGPKLAEGDNRTPEGFYW 78 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV------------- 111 + + + + Y L+++I +PNA D A G +MIHG + Sbjct: 79 IDWRKTS--NNYNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLD 136 Query: 112 -SVGCYAMTDAQIDEIFAFVRDA 133 + GC AM + + E+++ V+D Sbjct: 137 WTNGCIAMNNTDMREVWSVVKDG 159 >gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 309 Score = 56.6 bits (135), Expect = 4e-07 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 12/113 (10%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I K++R+L L MG ++I++Y + +GPK R+GD ++PEG Y ++ N Sbjct: 174 ILIEKKDRRLSL--LSMG---EVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIEGR--N 226 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACVSVGCYAMTDAQID 124 SRY+L++ I +PN D+ G +MIHG + A++D Sbjct: 227 KGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVD 279 >ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 Length = 139 Score = 55.8 bits (133), Expect = 7e-07 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 12/113 (10%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I K++R+L L MG ++I++Y + +GPK R+GD ++PEG Y ++ N Sbjct: 6 ILIEKKDRRLSL--LSMG---EVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIEGR--N 58 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACVSVGCYAMTDAQID 124 SRY+L++ I +PN D+ G +MIHG + A++D Sbjct: 59 KGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVD 111 >ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 Length = 139 Score = 55.5 bits (132), Expect = 7e-07 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K ERKL L ++KSY + GPK EGD ++PEGFY + + + Sbjct: 6 VLVLKSERKLLLLNKG-----NVLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTS 60 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV--------------SVGCYA 117 + Y L+++I +PNA D A G +MIHG + + GC A Sbjct: 61 --NNYNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIA 118 Query: 118 MTDAQIDEIFAFVRDA 133 M + + E+++ V+D Sbjct: 119 MNNTDMREVWSVVKDG 134 >gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 166 Score = 55.5 bits (132), Expect = 7e-07 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 22/135 (16%) Query: 12 GSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G PV +++ K +RK+ L ++++ Y + G K+ EGD ++PEG Y + Sbjct: 30 GPPVTSVQVHKADRKMYLLNGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFI 84 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV---------SVGCY 116 ++ NP S Y+L++ I +PN D+ + G + IHG + GC Sbjct: 85 --DRQNPRSTYHLSLGISYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCI 142 Query: 117 AMTDAQIDEIFAFVR 131 A+TD +++E+++ VR Sbjct: 143 AITDDEVEEVYSMVR 157 >gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 55.5 bits (132), Expect = 8e-07 Identities = 40/137 (29%), Positives = 76/137 (55%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K++R+L L + G+ L+++Y + +G K+ EGD ++PEG YS+ + N Sbjct: 78 IVVSKDKRQLYL----VSGD-TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSI--DYKN 130 Query: 77 PDSRYYLAINIGFPN----AYDRAHGYT-GKYLMIHGACV----------------SVGC 115 P S++ ++++ +PN AY ++ G + G +MIHG ++GC Sbjct: 131 PKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGC 190 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI+A V++ Sbjct: 191 IAVTNKEIEEIYALVKE 207 >gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] Length = 171 Score = 54.3 bits (129), Expect = 2e-06 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 26/134 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 ++I K ER++ L + + IK Y + G K +EGD ++PEG Y + + Sbjct: 36 VKIDKSERRMYLLENG-----KTIKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYKK-- 88 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHG-----ACVSV---------GCYA 117 DS +Y A++I +PN D + G++ G +MIHG A VS GC A Sbjct: 89 EDSSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGCIA 148 Query: 118 MTDAQIDEIFAFVR 131 +T++++D+ + V+ Sbjct: 149 LTNSEMDQFMSLVK 162 >gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 187 Score = 53.9 bits (128), Expect = 2e-06 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K R+L+L GGE +K+Y I G K +EGD ++PEGFY + + Sbjct: 52 VLVLKSARQLQLIS---GGE--ALKTYRISLGKNPKGTKLQEGDQRTPEGFYWI--DWRK 104 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACV--------------SVGCYA 117 P + Y L+++I +PN D A + G +M+HG V + GC A Sbjct: 105 PSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIA 164 Query: 118 MTDAQIDEIFAFVRDA 133 + + + EI+ V+D Sbjct: 165 LKNNDMREIWDLVKDG 180 >ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 Length = 141 Score = 53.5 bits (127), Expect = 3e-06 Identities = 40/137 (29%), Positives = 76/137 (55%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K++R+L L + G+ L+++Y + +G K+ EGD ++PEG YS+ + N Sbjct: 6 IVVSKDKRQLYL----VSGD-TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSI--DYKN 58 Query: 77 PDSRYYLAINIGFPN----AYDRAHGYT-GKYLMIHGACV----------------SVGC 115 P S++ ++++ +PN AY ++ G + G +MIHG ++GC Sbjct: 59 PKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGC 118 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI+A V++ Sbjct: 119 IAVTNKEIEEIYALVKE 135 >ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 Length = 138 Score = 53.5 bits (127), Expect = 3e-06 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K ER+L+L + +K+Y I G K REGD ++PEG Y + + Sbjct: 5 VLVIKSERRLQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWL--DWRK 57 Query: 77 PDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGACV--------------SVGCYA 117 R+ LA++I +PN D RA G +MIHG + + GC A Sbjct: 58 QSDRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIA 117 Query: 118 MTDAQIDEIFAFVRDA 133 M + + E++ VRD Sbjct: 118 MRNRDMQEVWDLVRDG 133 >ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 Length = 139 Score = 52.8 bits (125), Expect = 5e-06 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 21/117 (17%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 +++K Y + G K+ EGD ++PEG Y + ++ NP+S ++L++ I +PN+ D A+ Sbjct: 22 KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLI--DRRNPNSAFHLSLGISYPNSRDVAY 79 Query: 98 GYT-----GKYLMIHGAC--------------VSVGCYAMTDAQIDEIFAFVRDAFV 135 G + IHG + GC A+ + +I+EI+A VRD V Sbjct: 80 AQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWTAGCIAVKNDEIEEIYAMVRDGTV 136 >gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pseudomonas syringae pv. tomato str. DC3000] Length = 208 Score = 52.8 bits (125), Expect = 5e-06 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K R+L+L GGE +K+Y + G K +EGD ++PEGFY + + Sbjct: 73 VLVLKSARQLQLIS---GGE--ALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWL--DWRK 125 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV--------------SVGCYA 117 P + Y L+++I +PN D A G +MIHG V + GC A Sbjct: 126 PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIA 185 Query: 118 MTDAQIDEIFAFVRDA 133 + + + EI+ V+D Sbjct: 186 LKNNDMREIWDLVKDG 201 >gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudomonas putida KT2440] Length = 184 Score = 52.8 bits (125), Expect = 5e-06 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K ER+L+L + +K+Y I G K REGD ++PEG Y + + Sbjct: 49 VLVIKSERRLQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWL--DWRK 101 Query: 77 PDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGACV--------------SVGCYA 117 R+ LA++I +PN D RA G +MIHG + + GC A Sbjct: 102 QSDRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIA 161 Query: 118 MTDAQIDEIFAFVRDA 133 M + + E++ VRD Sbjct: 162 MRNRDMQEVWDLVRDG 177 >gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 124 Score = 52.4 bits (124), Expect = 6e-06 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 22/118 (18%) Query: 33 MGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNA 92 M GE ++K Y + + G K++EGD ++PEG YS+ + DS +Y A++I +PNA Sbjct: 1 MKGE-TVVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYKK--EDSAFYRAMHISYPNA 57 Query: 93 YD----RAHGYT-GKYLMIHGACVSV--------------GCYAMTDAQIDEIFAFVR 131 D +A G + G ++M+HG + GC A+T++ +DE V+ Sbjct: 58 EDVRKAKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCIALTNSDMDEFMDKVK 115 >gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 192 Score = 52.4 bits (124), Expect = 6e-06 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 26/129 (20%) Query: 21 KEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSR 80 K ER L L+ GG +KSY I +G K R+GD ++PEG YS+ ++ NP S Sbjct: 61 KGERLLHLYS---GG--AAVKSYRIALGFNPVGAKLRQGDGKTPEGRYSI--SERNPQSS 113 Query: 81 YYLAINIGFPNAYDR-----AHGYTGKYLMIHGACVSV--------------GCYAMTDA 121 Y+L++ I +P+ DR A G + IHG S+ GC A+T+ Sbjct: 114 YHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGCIAVTND 173 Query: 122 QIDEIFAFV 130 +I+E++ V Sbjct: 174 EIEELWKAV 182 >ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 Length = 138 Score = 52.4 bits (124), Expect = 7e-06 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K R+L+L GGE +K+Y + G K +EGD ++PEGFY + + Sbjct: 5 VLVLKSARQLQLIS---GGE--ALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWL--DWRK 57 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV--------------SVGCYA 117 P + Y L+++I +PN D A G +MIHG V + GC A Sbjct: 58 PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIA 117 Query: 118 MTDAQIDEIFAFVRDA 133 + + + EI+ V+D Sbjct: 118 LKNNDMREIWDLVKDG 133 >gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 202 Score = 52.0 bits (123), Expect = 9e-06 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 21/117 (17%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 +++K Y + G K+ EGD ++PEG Y + ++ NP+S ++L++ I +PN+ D A+ Sbjct: 83 KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLI--DRRNPNSAFHLSLGISYPNSRDVAY 140 Query: 98 GYT-----GKYLMIHGAC--------------VSVGCYAMTDAQIDEIFAFVRDAFV 135 G + IHG + GC A+ + +I+EI+A VRD V Sbjct: 141 AQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWTAGCIAVKNDEIEEIYAMVRDGTV 197 >gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 188 Score = 50.8 bits (120), Expect = 2e-05 Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 28/129 (21%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 +++K Y I G K +EGD ++P+G Y++ + PDS YY +I+I +PN D+ Sbjct: 69 KILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYKK--PDSAYYKSIHISYPNEEDKLR 126 Query: 98 GYT-----GKYLMIHGACV--------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G +MIHG + GC A+T+A++DE++ V + G Sbjct: 127 AKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDE----GT 182 Query: 139 PSVQVSIYP 147 P + I+P Sbjct: 183 P---IEIWP 188 >gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 186 Score = 49.7 bits (117), Expect = 5e-05 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K R L L + + + I+SY I + G K+ EGD ++PEG Y + + N Sbjct: 49 ILVIKSTRALHLLR-----DGETIRSYDISLGAAPEGHKQSEGDERTPEGRYEI--DWRN 101 Query: 77 PDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIH------GACVSV--------GCYA 117 P+S +L+++I +PNA D+A G +MIH GA ++ GC A Sbjct: 102 PNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCIA 161 Query: 118 MTDAQIDEIFAFVRDA 133 +T+A++ EI++ V D Sbjct: 162 VTNAEMREIWSLVPDG 177 >gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 209 Score = 49.3 bits (116), Expect = 5e-05 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 19/96 (19%) Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIH 107 G K REGD ++PEG + + ++LN S Y+L++ I +P + R G +MIH Sbjct: 107 GDKSREGDGRTPEGIFRI--DRLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIH 164 Query: 108 GACVSV------------GCYAMTDAQIDEIFAFVR 131 G V GC A+ +A+I+EIFA R Sbjct: 165 GQPNQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHAR 200 >gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] Length = 325 Score = 49.3 bits (116), Expect = 5e-05 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 49 SGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMI 106 +G +G K+ EGD ++P GFY + + NP YY A +PN D+ G TG + I Sbjct: 98 TGLMGDKQVEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156 Query: 107 HGACV---------SVGCYAMTDAQIDEIFAFVRD 132 HG + + GC A+ + ++E V+D Sbjct: 157 HGYPLDGTRLDEFKTRGCIALFNENLEEFAKVVQD 191 >gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5] Length = 167 Score = 48.5 bits (114), Expect = 1e-04 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 21/113 (18%) Query: 40 IKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY 99 +K+Y I GPK EGD ++PEG Y + + + RY LA++I +PN D A Sbjct: 50 LKTYRISLGKKPKGPKLMEGDKRTPEGLYWLDWRKTS--DRYNLAMHISYPNITDAARSR 107 Query: 100 -----TGKYLMIHGACVSV--------------GCYAMTDAQIDEIFAFVRDA 133 G +MIHG + GC AM + + E++ V+D Sbjct: 108 REGVDPGGMIMIHGTPDTEEFPEQYFHTLDWTDGCIAMRNVDMREVWGLVKDG 160 >gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 325 Score = 47.4 bits (111), Expect = 2e-04 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 49 SGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMI 106 +G +G K+ EGD ++P GFY + + NP YY A +PN D+ G TG + I Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156 Query: 107 HGACV---------SVGCYAMTDAQIDEIFAFVRD 132 HG + + GC A+ + +++ V+D Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAKVVQD 191 >gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 165 Score = 46.6 bits (109), Expect = 3e-04 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 28/129 (21%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYD--- 94 +LIKSY I G K +EGD ++P+G Y + + DS YY +I+I +PN D Sbjct: 46 ELIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDFKK--ADSAYYRSIHISYPNDEDILR 103 Query: 95 -RAHGYT-GKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +A G + G +MIHG + GC A+T+ +DE++ + Sbjct: 104 AKALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLI-------D 156 Query: 139 PSVQVSIYP 147 P + I+P Sbjct: 157 PGTPIEIWP 165 >gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] Length = 316 Score = 46.6 bits (109), Expect = 4e-04 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 10/79 (12%) Query: 49 SGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMI 106 +G +G K +EGD ++P GFY + + NP +YY A +PN D+ TG + I Sbjct: 89 TGLMGDKEKEGDLKTPVGFYELG-MKFNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWI 147 Query: 107 HGACVSVGCYAMTDAQIDE 125 HG Y + ++DE Sbjct: 148 HG-------YPLDGTRLDE 159 >gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 188 Score = 45.8 bits (107), Expect = 5e-04 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 22/112 (19%) Query: 38 QLIKSYPICKWSG-GLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYD-- 94 +++K+Y I S G K+REGD ++PEG Y + + NP S +L++++ +PNA D Sbjct: 64 RILKTYRIAMGSNWNQGHKQREGDERTPEGTYRI--DWRNPRSIAHLSLHVSYPNAEDSE 121 Query: 95 --RAHGYT-GKYLMIHGAC--------------VSVGCYAMTDAQIDEIFAF 129 R GY+ G +MIHG + GC A+T+ ++ EI++ Sbjct: 122 RARQAGYSPGGNIMIHGLPNGWGAMGRLHRLLDWTDGCIAVTNDEMREIWSL 173 >gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 181 Score = 45.8 bits (107), Expect = 6e-04 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 28/129 (21%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR-- 95 + IKSY I G K +EGD ++P+G Y + + DS +Y +I+I +PN D+ Sbjct: 62 KTIKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDYKK--SDSAFYKSIHISYPNEEDKLR 119 Query: 96 --AHGYT-GKYLMIHGACV--------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 A G + G +MIHG + GC A+T+ ++DE++ + + Sbjct: 120 ADALGISPGGMIMIHGENPKSTLPPEEAQKYNWTNGCIAVTNKEMDELWRMI-------E 172 Query: 139 PSVQVSIYP 147 P + I+P Sbjct: 173 PGTPIEIWP 181 >gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 171 Score = 45.4 bits (106), Expect = 8e-04 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 22/114 (19%) Query: 40 IKSYPICKWSGGL-GPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG 98 +KSY I G GPK EGD ++PEGFY + + + ++ L+++I +PN D A Sbjct: 53 LKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRKTS--EKFNLSMHISYPNISDSARA 110 Query: 99 Y-----TGKYLMIHGACVSV--------------GCYAMTDAQIDEIFAFVRDA 133 G +MIHG S GC AM + + E++ V D Sbjct: 111 RREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNLVPDG 164 >gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewanella oneidensis MR-1] Length = 171 Score = 45.4 bits (106), Expect = 9e-04 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 28/129 (21%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 +++K Y I G K EGD ++P+G Y + + DS YY +I+I +PN D+ Sbjct: 52 KVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILDYKK--SDSAYYKSIHISYPNEEDKLR 109 Query: 98 GYT-----GKYLMIHGACV--------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G +MIHG + GC A+T+A++DE++ V + G Sbjct: 110 AKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWTDGCIAITNAEMDEVWKAVDE----GT 165 Query: 139 PSVQVSIYP 147 P + I+P Sbjct: 166 P---IEIWP 171 >gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633] Length = 165 Score = 45.1 bits (105), Expect = 0.001 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 26/133 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ + + Sbjct: 30 VKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTL--DYVI 82 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCYA 117 DS +Y +++I +P+A D + G + IHG + GC A Sbjct: 83 EDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCIA 142 Query: 118 MTDAQIDEIFAFV 130 +T+ ++DE V Sbjct: 143 LTNEEMDEFIQLV 155 >gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 167 Score = 44.7 bits (104), Expect = 0.001 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 28/129 (21%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 +++KSY I G K +EGD ++P+G Y + + DS +Y +I+I +PN D+ Sbjct: 48 RVVKSYLIAMGDVPSGHKLKEGDQRTPQGRYVLDYKK--SDSAFYKSIHISYPNEEDKLR 105 Query: 98 G-----YTGKYLMIHGACV--------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G +MIHG + GC A+T+ ++DE++ + DA G Sbjct: 106 ADALGIRAGGMIMIHGENPRSTLPPEEAQKYNWTNGCIAVTNKEMDELWQMI-DA---GT 161 Query: 139 PSVQVSIYP 147 P + I+P Sbjct: 162 P---IEIWP 167 >gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 415 Score = 44.7 bits (104), Expect = 0.001 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 13/104 (12%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---PNQLNPDSRYYLAINIGFPN 91 G +LI Y I G K ++GD ++P G Y V P + PD A+ I +PN Sbjct: 172 GMPKLIADYYISSGKKG-AEKIKQGDKRTPAGLYYVTEYIPGEKLPDLYGAGAMPINYPN 230 Query: 92 AYDRAHGYTGKYLMIHGAC---------VSVGCYAMTDAQIDEI 126 +DR H TG + +HG S GC A+T+ +E+ Sbjct: 231 EWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLDFEEL 274 >gi|37675934|ref|NP_936330.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 161 Score = 44.7 bits (104), Expect = 0.001 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 26/135 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++++ K +R+L L M GE ++I+ Y I G K +EGD ++PEG Y++ + + Sbjct: 25 WVKVDKSKRRLYL----MSGE-EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTL--DYV 77 Query: 76 NPDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC--------------VSVGCY 116 +S +Y +++I +PN D + G + G + +HG + GC Sbjct: 78 TEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCI 137 Query: 117 AMTDAQIDEIFAFVR 131 A+T+ ++DE V+ Sbjct: 138 ALTNQEMDEFIRLVK 152 >ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 Length = 139 Score = 44.3 bits (103), Expect = 0.002 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 26/135 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++++ K +R+L L M GE ++I+ Y I G K +EGD ++PEG Y++ + + Sbjct: 5 WVKVDKSKRRLYL----MSGE-EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTL--DYV 57 Query: 76 NPDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC--------------VSVGCY 116 +S +Y +++I +PN D + G + G + +HG + GC Sbjct: 58 TEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCI 117 Query: 117 AMTDAQIDEIFAFVR 131 A+T+ ++DE V+ Sbjct: 118 ALTNQEMDEFIRLVK 132 >ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 Length = 139 Score = 43.9 bits (102), Expect = 0.002 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 26/133 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ + + Sbjct: 6 VKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTL--DYVI 58 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCYA 117 DS +Y +++I +P+A D + G + IHG + GC A Sbjct: 59 EDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCIA 118 Query: 118 MTDAQIDEIFAFV 130 +T+ ++DE V Sbjct: 119 LTNEEMDEFIQLV 131 >ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 Length = 139 Score = 43.9 bits (102), Expect = 0.003 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 21/115 (18%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 +++K Y I G K EGD ++P+G Y + + DS YY +I+I +PN D+ Sbjct: 22 KVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILDYKK--SDSAYYKSIHISYPNEEDKLR 79 Query: 98 GYT-----GKYLMIHGACV--------------SVGCYAMTDAQIDEIFAFVRDA 133 G +MIHG + GC A+T+A++DE++ V + Sbjct: 80 AKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWTDGCIAITNAEMDEVWKAVDEG 134 >gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5] Length = 397 Score = 43.9 bits (102), Expect = 0.003 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 9/64 (14%) Query: 52 LGPKRREGDFQSPEGFYS----VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLM 105 +G K REGD ++PEG Y + P QL S Y +A+ + +PN YD+ G TG + Sbjct: 169 IGDKEREGDGKTPEGVYYFTRFIPPEQL---SEIYGGIAVALNYPNPYDKLLGKTGSGIW 225 Query: 106 IHGA 109 +HG+ Sbjct: 226 LHGS 229 >gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100] Length = 209 Score = 43.5 bits (101), Expect = 0.003 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 22/111 (19%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 Q++ +Y + G K+ EGD ++PEG Y + S Y+L + I +PNA D A Sbjct: 89 QVLATYAVALGGNPQGHKKNEGDQRTPEGRYFFDLKK--AKSEYHLGLRINYPNARDLAE 146 Query: 98 GYT------GKYLMIHGACVS--------------VGCYAMTDAQIDEIFA 128 G ++IHG S GC A+ + +I+EI+A Sbjct: 147 AKKNGIKNPGDSILIHGLPNSWVKRKVIRHPRDWTKGCMAVRNYEIEEIYA 197 >gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 153 Score = 43.1 bits (100), Expect = 0.004 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 26/133 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ + + Sbjct: 18 VKVDKSKRRMYLME-----QGTILKEYRIALGASPKGHKQEEGDNRTPEGEYTL--DYVI 70 Query: 77 PDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGAC--------------VSVGCYA 117 DS +Y +++I +P+A D R G + IHG + GC A Sbjct: 71 EDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCIA 130 Query: 118 MTDAQIDEIFAFV 130 +T+ ++DE V Sbjct: 131 ITNEEMDEFIQLV 143 >gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str. N16961] Length = 194 Score = 43.1 bits (100), Expect = 0.004 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 33/148 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 +++ K +R++ L + ++I+ Y I G K++EGD ++PEG Y + + + Sbjct: 59 VKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLL--DFII 111 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC--------------VSVGCYA 117 DS +Y +I+I +PN D + G G + IHG + GC A Sbjct: 112 EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIA 171 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 +T+ ++DE + V QP V + I Sbjct: 172 ITNQEMDEFLSLV-------QPGVPILI 192 >ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 Length = 137 Score = 42.4 bits (98), Expect = 0.007 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 13/126 (10%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + KE+RKL +++ + G + Q I YP G G K + D ++PEG Y +Q Sbjct: 6 ILVDKEQRKLSVFE-RNGEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQERLSQ 63 Query: 77 PDSRYY----LAINIGFPNAYDRAHGYTGKYLMIHGACVSV-------GCYAMTDAQIDE 125 P + LA +PN +D+ TG + +H SV GC + + I + Sbjct: 64 PKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRNDVIKK 123 Query: 126 IFAFVR 131 + +++ Sbjct: 124 LADYIK 129 >gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100] Length = 332 Score = 42.4 bits (98), Expect = 0.007 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 13/126 (10%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + KE+RKL +++ + G + Q I YP G G K + D ++PEG Y +Q Sbjct: 52 ILVDKEQRKLSVFE-RNGEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQERLSQ 109 Query: 77 PDSRYY----LAINIGFPNAYDRAHGYTGKYLMIHGACVSV-------GCYAMTDAQIDE 125 P + LA +PN +D+ TG + +H SV GC + + I + Sbjct: 110 PKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRNDVIKK 169 Query: 126 IFAFVR 131 + +++ Sbjct: 170 LADYIK 175 >gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 171 Score = 40.4 bits (93), Expect = 0.027 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 18/103 (17%) Query: 43 YPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK 102 +P+ S G KR EGD ++P G Y++ + P + + I IG+P A R G TG Sbjct: 62 FPVALGSAGT-EKRAEGDRRTPLGAYALGTPR--PSAGFGTFIPIGYPTAEQRRAGRTGS 118 Query: 103 YLMIHG--------------ACVSVGCYAM-TDAQIDEIFAFV 130 + IHG A + GC A+ +D ++ + AFV Sbjct: 119 NVGIHGPARAMRWAGRLNTWADWTAGCVALGSDPEVAAVAAFV 161 >gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 175 Score = 40.4 bits (93), Expect = 0.029 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 29/124 (23%) Query: 27 ELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAIN 86 ELW G + + G+G KRR GD ++P G Y + P +Y I Sbjct: 53 ELWLCSGGAP---AAQFTVALGRSGVG-KRRRGDGRTPLGTYPL--GDPRPSPQYGTFIP 106 Query: 87 IGFPNAYDRAHGYTGKYLMIHG-------------------ACVSVGCYAMTDAQIDEIF 127 I +P A G+TG + IHG C++ G TD +D I Sbjct: 107 IAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCIATG----TDGDVDAIA 162 Query: 128 AFVR 131 AFVR Sbjct: 163 AFVR 166 >gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted protein, putative [Campylobacter lari RM2100] Length = 323 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 49 SGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMI 106 +G G K EGD ++P GFY + + P YY A +PN D+ G TG + I Sbjct: 97 TGLAGDKEIEGDLKTPIGFYELG-KKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWI 155 Query: 107 HG 108 HG Sbjct: 156 HG 157 >gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_2069 [Prosthecochloris aestuarii DSM 271] Length = 124 Score = 39.3 bits (90), Expect = 0.065 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 7/78 (8%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 LP + + K++R L L+ + ++KSY I G KR GD ++PEG Y+ Sbjct: 45 LPVEADSLVVSKDDRLLHLYS-----DGAVVKSYTIALGFSPRGAKRYLGDGRTPEGRYT 99 Query: 70 VQPNQLNPDSRYYLAINI 87 + NP SRY+L+++I Sbjct: 100 IIGR--NPQSRYHLSLSI 115 >gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 431 Score = 38.9 bits (89), Expect = 0.077 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 21/183 (11%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWK--AKMGGEYQLIKSYPICKWSGGLGPKRR-E 58 V + L Q P I + + +L L++ K G + + Y I G LG ++ E Sbjct: 154 VPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYITH--GKLGAEKLVE 211 Query: 59 GDFQSPEGFYSVQ---PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC----- 110 GD ++P G Y V P Q D A + +PN +D+ G G + +HG Sbjct: 212 GDKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGGSGIWLHGTPSNTFA 271 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS-VQVSIYPFRMTDANMQRHRNSPNYD 165 S GC +T+ +D + ++ VG P + S+ + D +R+ + D Sbjct: 272 RPPRASDGCVVLTNQDLDVV---AKNLQVGLTPVIISNSVEWLSLDDWAKERNELNKTID 328 Query: 166 FWK 168 W+ Sbjct: 329 AWR 331 >gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [Thiomicrospira denitrificans ATCC 33889] Length = 321 Score = 38.1 bits (87), Expect = 0.13 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 16/85 (18%) Query: 53 GPKRREGDFQSPEGFYSV-----QPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLM 105 G K +EGD ++P G Y + + +L+P +Y A +PN YD G G + Sbjct: 100 GDKIKEGDLRTPTGIYQITQKLSKETKLDP---FYGPFAFVTSYPNVYDTYKGKNGSGIW 156 Query: 106 IHGACV------SVGCYAMTDAQID 124 IHG + GC A+ ++ I+ Sbjct: 157 IHGLPAEDRDEFTRGCIAINNSSIE 181 >gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens] Length = 162 Score = 38.1 bits (87), Expect = 0.14 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 39 LIKSYPICKWSGGLGPKRREGDFQSPEGFYSV-QPNQLNPDSRYYLAINIGFPNAYDRAH 97 ++K++ + G+G K++ GD ++P G Y + P + N ++ + I I +P A Sbjct: 48 VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKSN---QFKVFIPILYPTKQQLAA 103 Query: 98 GYTGKYLMIHGACVSVGCYA 117 GYTG+ + IHG S G + Sbjct: 104 GYTGRDVGIHGPTQSPGVFG 123 >gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens DSM 15236] Length = 414 Score = 37.4 bits (85), Expect = 0.24 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Query: 39 LIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS--RYYL--AINIGFPNAYD 94 LI Y + GL K EGD ++P G Y + N L+P S +Y A+ I +PN D Sbjct: 177 LIADYYVSIGKSGLS-KNAEGDLRTPMGVYFITSN-LDPKSLKDFYGSGALPINYPNVLD 234 Query: 95 RAHGYTGKYLMIHG 108 G TG + +HG Sbjct: 235 NLRGKTGGGIWLHG 248 >gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes] Length = 322 Score = 37.4 bits (85), Expect = 0.24 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHG 108 G KR EGD ++P G Y + D Y LA +PN YD +G + IHG Sbjct: 102 GDKRIEGDLKTPIGVYDLTAKLTRLDQLYGPLAFVTSYPNLYDSLQKKSGSGIWIHG 158 >gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein conserved in bacteria [Desulfovibrio desulfuricans G20] Length = 429 Score = 37.0 bits (84), Expect = 0.31 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ-- 71 P ++ + K + L L++ E + + C G K+ EGD ++PEG Y V+ Sbjct: 42 PRFVAVDKSRQTLFLYRHSSPLE---VSATYTCTTGQATGDKQVEGDLRTPEGVYFVEHR 98 Query: 72 -PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSV------GCYAMTDAQID 124 L+ D +A + +PN D TG + IHG + GC A+ A I+ Sbjct: 99 IDKGLDWDLYGGIAYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADIE 158 >gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 223 Score = 37.0 bits (84), Expect = 0.31 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 39/146 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K +R+L L + L++ YPI G K GD ++PEG + + N Sbjct: 75 IYVYKSDRRLLLVNNGV-----LVREYPIGLGFSPNGDKFMRGDGRTPEGQFFICAK--N 127 Query: 77 PDSRYYLAINIGFP--------------------NAYDRAHG--------YTGKYLMIHG 108 P+SR+Y ++ + +P N + + G G + IHG Sbjct: 128 PNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVLGGDIFIHG 187 Query: 109 ACV----SVGCYAMTDAQIDEIFAFV 130 + GC A+ ++ +DE+F+ V Sbjct: 188 GGAGRDWTWGCVAVRNSAMDELFSIV 213 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Brady... 341 5e-93 gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [M... 339 4e-92 gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodo... 334 6e-91 gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitr... 332 2e-90 gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor... 332 4e-90 DUF949_Q89XW3_52-252_PF06104.2 330 1e-89 gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesor... 328 4e-89 gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF94... 328 5e-89 gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizob... 327 1e-88 DUF949_Q92JZ0_45-245_PF06104.2 325 3e-88 gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melite... 324 7e-88 DUF949_Q83M88_30-229_PF06104.2 323 1e-87 DUF949_Q98FX6_1-193_PF06104.2 323 2e-87 gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmone... 323 2e-87 gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella qui... 322 5e-87 gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Barto... 319 2e-86 DUF949_Q8YJP4_41-241_PF06104.2 317 8e-86 gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [M... 316 3e-85 gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefacien... 314 7e-85 gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia p... 313 1e-84 gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefacien... 313 2e-84 DUF949_Q6G1H8_42-242_PF06104.2 310 2e-83 DUF949_Q6G1P2_42-242_PF06104.2 310 2e-83 DUF949_Q7CSY6_66-266_PF06104.2 308 4e-83 DUF949_Q66E07_28-227_PF06104.2 308 5e-83 DUF949_Q7CS68_57-257_PF06104.2 307 9e-83 gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia c... 307 1e-82 gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salm... 306 3e-82 DUF949_Q57JI8_39-239_PF06104.2 303 2e-81 DUF949_Q6D1H5_32-231_PF06104.2 302 5e-81 gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein ... 301 7e-81 gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photo... 290 1e-77 DUF949_Q7N7F5_31-231_PF06104.2 287 2e-76 gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein ... 274 1e-72 gi|54297427|ref|YP_123796.1| Legionella secretion system protein... 201 7e-51 ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 175 7e-43 gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesor... 175 7e-43 DUF949_Q60B45_95-280_PF06104.2 172 4e-42 gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methy... 172 5e-42 gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] 171 7e-42 gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia s... 168 6e-41 gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella bur... 168 6e-41 gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 168 7e-41 gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 167 1e-40 ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 167 2e-40 gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 167 2e-40 gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protei... 166 2e-40 gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella b... 166 3e-40 gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudo... 164 8e-40 DUF949_Q6LJZ6_66-236_PF06104.2 164 1e-39 gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 164 1e-39 gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 164 2e-39 gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewan... 163 2e-39 gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 163 3e-39 gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pse... 162 4e-39 gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Pho... 162 4e-39 ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 162 6e-39 gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 162 6e-39 gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 161 9e-39 gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseu... 161 1e-38 gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella f... 160 2e-38 gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 159 4e-38 gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein ... 159 5e-38 ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 158 6e-38 ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 157 1e-37 gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella a... 157 1e-37 gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibri... 157 1e-37 gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein ... 156 2e-37 gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein ... 156 2e-37 gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 156 3e-37 gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [S... 156 4e-37 gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella d... 155 7e-37 gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdello... 155 7e-37 gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Ery... 154 9e-37 DUF949_Q83XL8_75-191_PF06104.2 154 1e-36 gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein ... 154 1e-36 gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdello... 154 2e-36 ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 153 2e-36 gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein ... 153 2e-36 gi|37675934|ref|NP_936330.1| uncharacterized protein conserved i... 152 3e-36 gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 152 5e-36 gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 152 5e-36 ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 151 1e-35 ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 151 1e-35 gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibri... 151 2e-35 ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 150 2e-35 ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 149 3e-35 gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 143 2e-33 gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulf... 142 5e-33 ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 140 2e-32 gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein ... 133 3e-30 gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdello... 132 4e-30 DUF949_Q83CG1_72-171_PF06104.2 122 4e-27 gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 110 2e-23 gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted p... 107 2e-22 gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylo... 100 2e-20 gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted p... 99 4e-20 gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquife... 78 1e-13 Sequences not found previously or not previously below threshold: gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 115 9e-25 gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 102 4e-21 gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax f... 97 2e-19 gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted p... 93 3e-18 gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 91 1e-17 gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 88 1e-16 gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovi... 87 2e-16 ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 86 6e-16 gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein ... 86 6e-16 gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_20... 85 1e-15 gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [T... 83 3e-15 gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Woli... 83 3e-15 gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protei... 77 2e-13 gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protei... 77 3e-13 gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protei... 76 4e-13 ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 73 4e-12 gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein ... 73 4e-12 gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methy... 71 2e-11 ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 70 4e-11 gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 68 1e-10 gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helic... 68 1e-10 gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legio... 65 9e-10 gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legio... 65 1e-09 gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 61 3e-08 gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitros... 59 7e-08 gi|28275296|ref|NP_783551.1| hypothetical protein SO4656.3 [Shew... 58 1e-07 ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 58 1e-07 gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/Y... 56 5e-07 ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 55 9e-07 gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family ... 55 9e-07 gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan bi... 53 3e-06 ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 52 1e-05 ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 49 1e-04 gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [B... 49 1e-04 gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermo... 48 1e-04 ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 48 1e-04 gi|50085556|ref|YP_047066.1| conserved hypothetical protein; put... 48 1e-04 ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 48 2e-04 gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subt... 48 2e-04 gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein ... 47 3e-04 gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Aci... 46 6e-04 gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:Er... 46 6e-04 ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 45 7e-04 gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acin... 45 0.001 gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera... 45 0.001 gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromo... 44 0.002 ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 44 0.002 gi|71367451|ref|ZP_00657976.1| similar to Uncharacterized protei... 44 0.003 gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobac... 43 0.004 ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 42 0.007 gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 42 0.009 ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 41 0.018 gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Baci... 41 0.018 gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/Y... 41 0.020 ErfK_YbiS_YhnG_Q5ZV58_5-145_PF03734.4 41 0.021 gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:Er... 40 0.028 gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesor... 40 0.030 ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 40 0.033 gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 40 0.043 gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. ... 39 0.099 ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 39 0.11 gi|18144285|dbj|BAB80332.1| hypothetical protein [Clostridium pe... 38 0.12 gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 38 0.13 gi|62896365|emb|CAH94386.1| putative thiamine biosynthesis lipop... 37 0.21 gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 37 0.27 >gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110] Length = 526 Score = 341 bits (876), Expect = 5e-93 Identities = 108/196 (55%), Positives = 142/196 (72%), Gaps = 3/196 (1%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 V K++ Q SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Sbjct: 56 VEKDMDLQ---SPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDR 112 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD Sbjct: 113 QAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDE 172 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR Sbjct: 173 QIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTR 232 Query: 182 KPPTVSVCNGRYVFSK 197 + P V C +YVF Sbjct: 233 QEPKVDFCEKKYVFDA 248 >gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 439 Score = 339 bits (869), Expect = 4e-92 Identities = 116/193 (60%), Positives = 147/193 (76%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K +P+ +R+FKEE LE+WK K G Y L+KSY ICKWSG LGPK EGD Q+P Sbjct: 53 KAKGMSTNAPIMMRVFKEEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAP 112 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+++P Q+NP+S Y+L+ NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q++ Sbjct: 113 EGFYTIRPQQMNPNSSYHLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVE 172 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ + Q +PFRMT NM R+RN PNY FW+ LK GYD+FE T+ PP Sbjct: 173 EIYAFARDAFRGGQEAFQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPP 232 Query: 185 TVSVCNGRYVFSK 197 V VC RYVF++ Sbjct: 233 KVDVCEARYVFNR 245 >gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009] Length = 491 Score = 334 bits (858), Expect = 6e-91 Identities = 108/191 (56%), Positives = 137/191 (71%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ +R+FK+E +LE+WK G +QL+KSYPIC+WSG LGPK REGD Q+PEG Sbjct: 66 KNMDLQSPILVRLFKQEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEG 125 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S GCYAMTD QI EI Sbjct: 126 FYSISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEI 185 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R++F GGQ + Q+ YPF+MT N +HRN+PN FWK LK GYD+FE TR+ P V Sbjct: 186 YALGRESFFGGQRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKV 245 Query: 187 SVCNGRYVFSK 197 C +YVF Sbjct: 246 DFCEHKYVFDA 256 >gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255] Length = 492 Score = 332 bits (853), Expect = 2e-90 Identities = 107/192 (55%), Positives = 138/192 (71%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K SP+ IR+FK+E +LE+WK G++ L+KSYPIC+WSG LGPK REGD Q+PE Sbjct: 52 AKDMELQSPILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGPKTREGDRQAPE 111 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFYS+ P Q+NP S YYL+ N G+PN +D++ G TG LM+HG C S GCYAMTD QI E Sbjct: 112 GFYSITPAQMNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAE 171 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+A R++F GGQ + Q+ YPFRMT AN+ +HRN+PN FWK +K G D+FE TR+ P Sbjct: 172 IYAVGRESFFGGQRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPK 231 Query: 186 VSVCNGRYVFSK 197 V+ C +YVF Sbjct: 232 VAFCERKYVFDP 243 >gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor [Escherichia coli CFT073] Length = 246 Score = 332 bits (851), Expect = 4e-90 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 30 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 88 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 89 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 148 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 149 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 208 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 209 RKPPTVSVVNGRYVVSKPLSH 229 >DUF949_Q89XW3_52-252_PF06104.2 Length = 201 Score = 330 bits (846), Expect = 1e-89 Identities = 108/196 (55%), Positives = 142/196 (72%), Gaps = 3/196 (1%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 V K++ Q SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Sbjct: 5 VEKDMDLQ---SPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDR 61 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD Sbjct: 62 QAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDE 121 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR Sbjct: 122 QIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTR 181 Query: 182 KPPTVSVCNGRYVFSK 197 + P V C +YVF Sbjct: 182 QEPKVDFCEKKYVFDA 197 >gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099] Length = 395 Score = 328 bits (842), Expect = 4e-89 Identities = 122/185 (65%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S V RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 5 SSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRP 64 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +Q+NP S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RD Sbjct: 65 SQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRD 124 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC R Sbjct: 125 AFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKR 184 Query: 193 YVFSK 197 YVF++ Sbjct: 185 YVFNQ 189 >gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14] Length = 502 Score = 328 bits (842), Expect = 5e-89 Identities = 104/191 (54%), Positives = 134/191 (70%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ IR+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Q+PEG Sbjct: 68 KDMELQSPILIRLFKQEAELEVWKQNRSGKFALLKTYPICRWSGDLGPKTREGDRQAPEG 127 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S GCYAMTD QI EI Sbjct: 128 FYSISPAQMNPRSAYYLSFNTGYPNAFDKSLGRTGSELMVHGDCSSRGCYAMTDEQIAEI 187 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R++F GGQ + Q YPF MT N+ +HRN+PN FWK +K G D+FE T + P V Sbjct: 188 YALGRESFFGGQHAFQFQAYPFHMTPVNLAKHRNNPNMPFWKMIKEGSDHFEVTHQAPKV 247 Query: 187 SVCNGRYVFSK 197 C +YVF Sbjct: 248 EFCEHKYVFDP 258 >gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizobium meliloti] Length = 480 Score = 327 bits (839), Expect = 1e-88 Identities = 117/185 (63%), Positives = 144/185 (77%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY + P Sbjct: 57 SPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFYPLYP 116 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 NQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA RD Sbjct: 117 NQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFALARD 176 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+VC + Sbjct: 177 AFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNVCERK 236 Query: 193 YVFSK 197 YVF++ Sbjct: 237 YVFNQ 241 >DUF949_Q92JZ0_45-245_PF06104.2 Length = 201 Score = 325 bits (835), Expect = 3e-88 Identities = 117/185 (63%), Positives = 144/185 (77%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY + P Sbjct: 13 SPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFYPLYP 72 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 NQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA RD Sbjct: 73 NQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFALARD 132 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+VC + Sbjct: 133 AFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNVCERK 192 Query: 193 YVFSK 197 YVF++ Sbjct: 193 YVFNQ 197 >gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melitensis 16M] Length = 403 Score = 324 bits (832), Expect = 7e-88 Identities = 121/186 (65%), Positives = 142/186 (76%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 53 SPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRP 112 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ EI+AF RD Sbjct: 113 AQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRD 172 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP V VC R Sbjct: 173 AFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKR 232 Query: 193 YVFSKP 198 YVF+ P Sbjct: 233 YVFNVP 238 >DUF949_Q83M88_30-229_PF06104.2 Length = 200 Score = 323 bits (830), Expect = 1e-87 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 1 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 60 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 120 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 179 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 180 RKPPTVSVANGRYVVSKPLSH 200 >DUF949_Q98FX6_1-193_PF06104.2 Length = 193 Score = 323 bits (829), Expect = 2e-87 Identities = 122/185 (65%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S V RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 5 SSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRP 64 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +Q+NP S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RD Sbjct: 65 SQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRD 124 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC R Sbjct: 125 AFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKR 184 Query: 193 YVFSK 197 YVF++ Sbjct: 185 YVFNQ 189 >gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica serovar Typhi Ty2] Length = 246 Score = 323 bits (828), Expect = 2e-87 Identities = 158/198 (79%), Positives = 171/198 (86%), Gaps = 1/198 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 KE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY IC +SGGLGPKRR+GDF+S Sbjct: 33 KEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKS 91 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFYSVQ NQL PDSR+Y AINIGFPNAYDRAHGY GKYLMIHGACVSVGCYAMTD+ I Sbjct: 92 PEGFYSVQRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGI 151 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 DEIF FV A V GQPSVQVSIYPFRMTDANMQRH+ S DFW QLKPGYDYFEQT KP Sbjct: 152 DEIFQFVTAALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKP 211 Query: 184 PTVSVCNGRYVFSKPLSH 201 PTVS+ +GRYV SKPLSH Sbjct: 212 PTVSIVDGRYVVSKPLSH 229 >gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 247 Score = 322 bits (825), Expect = 5e-87 Identities = 110/202 (54%), Positives = 142/202 (70%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGP Sbjct: 36 PLPQEVQNKMVLHNIDPYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGD Q+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVG Sbjct: 96 KYKEGDLQTPEGFYTISADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAM D + +I+AF RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GY Sbjct: 156 CYAMGDKNMAQIYAFARDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D+FE+ RKPPTV V RYVFS Sbjct: 216 DFFEENRKPPTVDVYKKRYVFS 237 >gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] Length = 247 Score = 319 bits (819), Expect = 2e-86 Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + LI Y ICKWSG LGP Sbjct: 36 PLPREVQNRMVLYNVDPYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGDFQ+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S G Sbjct: 96 KYKEGDFQTPEGFYTISASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+M+D + +I+AF RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GY Sbjct: 156 CYSMSDKNMAQIYAFARDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D FE+ RKPPTV V RYVF+ Sbjct: 216 DLFEKNRKPPTVDVYEKRYVFN 237 >DUF949_Q8YJP4_41-241_PF06104.2 Length = 201 Score = 317 bits (814), Expect = 8e-86 Identities = 121/186 (65%), Positives = 142/186 (76%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 13 SPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRP 72 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ EI+AF RD Sbjct: 73 AQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRD 132 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP V VC R Sbjct: 133 AFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKR 192 Query: 193 YVFSKP 198 YVF+ P Sbjct: 193 YVFNVP 198 >gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 335 Score = 316 bits (810), Expect = 3e-85 Identities = 105/191 (54%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P +PV +RIFK+E +LE+WK G++ L+K+YP+C+WSG LGPK++ GD Q+PEG Sbjct: 47 KSMSPSAPVLVRIFKQESELEVWKRDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEG 106 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YYL+ N+G+PN + A GYTG+ LM+HGAC S GC+A+TD + EI Sbjct: 107 FYHVSARMLNPNSQYYLSFNLGYPNRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEI 166 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R+A GGQ S QV +PFRMT NM ++RN PN+ FW LK GYD FE TR+ P V Sbjct: 167 YAVAREALKGGQGSFQVQAFPFRMTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKV 226 Query: 187 SVCNGRYVFSK 197 S C GRYVF + Sbjct: 227 SYCEGRYVFDR 237 >gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefaciens str. C58] Length = 351 Score = 314 bits (806), Expect = 7e-85 Identities = 110/192 (57%), Positives = 135/192 (70%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+P Sbjct: 61 SAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAP 120 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ Sbjct: 121 EGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVG 180 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 181 EIYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQP 240 Query: 185 TVSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 241 KVSVCGRRYVFN 252 >gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Medievalis str. 91001] Length = 250 Score = 313 bits (803), Expect = 1e-84 Identities = 136/197 (69%), Positives = 163/197 (82%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 33 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFY + L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 92 KSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 151 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ N+QRHRNS +FW+QL+PGY YF + R Sbjct: 152 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNR 211 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 212 MPPPVSVSNGQYVLSPP 228 >gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefaciens str. C58] Length = 452 Score = 313 bits (802), Expect = 2e-84 Identities = 113/186 (60%), Positives = 138/186 (74%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PEGFY++ Sbjct: 77 NSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFYNLT 136 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI EI+ F R Sbjct: 137 PAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFAR 196 Query: 132 DAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNG 191 DAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP V+VC Sbjct: 197 DAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVNVCEK 256 Query: 192 RYVFSK 197 +YVF++ Sbjct: 257 KYVFNQ 262 >DUF949_Q6G1H8_42-242_PF06104.2 Length = 201 Score = 310 bits (794), Expect = 2e-83 Identities = 108/186 (58%), Positives = 134/186 (72%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGPK +EGD Q+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVGCYAM D + +I+AF Sbjct: 71 SADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GYD+FE+ RKPPTV V Sbjct: 131 RDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYK 190 Query: 191 GRYVFS 196 RYVFS Sbjct: 191 KRYVFS 196 >DUF949_Q6G1P2_42-242_PF06104.2 Length = 201 Score = 310 bits (794), Expect = 2e-83 Identities = 109/186 (58%), Positives = 136/186 (73%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + LI Y ICKWSG LGPK +EGDFQ+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S GCY+M+D + +I+AF Sbjct: 71 SASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GYD FE+ RKPPTV V Sbjct: 131 RDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYE 190 Query: 191 GRYVFS 196 RYVF+ Sbjct: 191 KRYVFN 196 >DUF949_Q7CSY6_66-266_PF06104.2 Length = 201 Score = 308 bits (791), Expect = 4e-83 Identities = 113/186 (60%), Positives = 138/186 (74%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PEGFY++ Sbjct: 12 NSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFYNLT 71 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI EI+ F R Sbjct: 72 PAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFAR 131 Query: 132 DAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNG 191 DAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP V+VC Sbjct: 132 DAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVNVCEK 191 Query: 192 RYVFSK 197 +YVF++ Sbjct: 192 KYVFNQ 197 >DUF949_Q66E07_28-227_PF06104.2 Length = 200 Score = 308 bits (790), Expect = 5e-83 Identities = 138/197 (70%), Positives = 164/197 (83%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 2 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFYS+ L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 61 KSPEGFYSINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 120 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ NMQRHRNS +FW+QL+PGY YF + R Sbjct: 121 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNR 180 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 181 MPPPVSVSNGQYVLSPP 197 >DUF949_Q7CS68_57-257_PF06104.2 Length = 201 Score = 307 bits (788), Expect = 9e-83 Identities = 110/192 (57%), Positives = 135/192 (70%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+P Sbjct: 5 SAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAP 64 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ Sbjct: 65 EGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVG 124 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 125 EIYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQP 184 Query: 185 TVSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 185 KVSVCGRRYVFN 196 >gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 244 Score = 307 bits (787), Expect = 1e-82 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ AK+G EY+L++ YPICK+SGGLGPKR EGD Sbjct: 32 PIAKELKQQLLGSPIYIQIFKEERIFELY-AKVGNEYRLLEQYPICKYSGGLGPKRVEGD 90 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 91 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 150 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 151 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 210 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 211 NQPPAITVFNGQYVVNPPL 229 >gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella typhimurium LT2] Length = 239 Score = 306 bits (784), Expect = 3e-82 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 39 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 98 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 99 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 158 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 159 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 218 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 219 RRLPTITVENRRYKISP 235 >DUF949_Q57JI8_39-239_PF06104.2 Length = 201 Score = 303 bits (777), Expect = 2e-81 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 1 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 61 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 120 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 121 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 180 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 181 RRLPTITVENRRYKISP 197 >DUF949_Q6D1H5_32-231_PF06104.2 Length = 200 Score = 302 bits (773), Expect = 5e-81 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ AK+G EY+L++ YPICK+SGGLGPKR EGD Sbjct: 1 PIAKELKQQLLGSPIYIQIFKEERIFELY-AKVGNEYRLLEQYPICKYSGGLGPKRVEGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 60 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 120 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 179 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 180 NQPPAITVFNGQYVVNPPL 198 >gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 238 Score = 301 bits (772), Expect = 7e-81 Identities = 101/187 (54%), Positives = 135/187 (72%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+P++IRIFK+ LE+W G ++L K+Y IC SG LGPK R GD Q+PEGFY V Sbjct: 52 GAPIFIRIFKQSATLEVWLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQAPEGFYFVN 111 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 + NP S+++L+ N+G+PNAYDRAHG TG LM+HG CVS+GCYAMTD+ I+EI+A + Sbjct: 112 AQRFNPWSKFHLSFNLGYPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGIEEIYALAQ 171 Query: 132 DAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNG 191 + GQP +V I+PFR++D ++R +N+ Y FW LK G+DYFEQT+ PP V+V N Sbjct: 172 KSLEDGQPFFRVHIFPFRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMPPNVNVQNK 231 Query: 192 RYVFSKP 198 RYVFS P Sbjct: 232 RYVFSAP 238 >gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 290 bits (743), Expect = 1e-77 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 41 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 101 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 160 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 161 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 220 Query: 191 GRYVFSK 197 G+YV + Sbjct: 221 GQYVVNA 227 >DUF949_Q7N7F5_31-231_PF06104.2 Length = 201 Score = 287 bits (734), Expect = 2e-76 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 11 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 71 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 131 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 190 Query: 191 GRYVFSK 197 G+YV + Sbjct: 191 GQYVVNA 197 >gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 274 bits (701), Expect = 1e-72 Identities = 90/167 (53%), Positives = 121/167 (72%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIG 88 ++A+ G Y L+K+YPI +WS LGPK ++GD Q+PEGFY++ P Q+NP+S YYL+ ++G Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62 Query: 89 FPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 +PNA DRA G TG Y+M+HG C S GC+AMTDA + EI+A R+AF GGQ + Q YPF Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNGGQRAFQFQSYPF 122 Query: 149 RMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVF 195 RMT AN+ + RN PN FW+ LK G DYFE ++ P V+ C +YVF Sbjct: 123 RMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169 >gi|54297427|ref|YP_123796.1| Legionella secretion system protein A [Legionella pneumophila str. Paris] Length = 243 Score = 201 bits (513), Expect = 7e-51 Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 20/192 (10%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + P + + FK ERK+ELW E+ I YP+ +SG LGPK RE D Sbjct: 57 YFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDK 116 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGC 115 Q PEG Y + NP S +L++ I +PN++DR GY G + IHG +SVGC Sbjct: 117 QIPEGIYKLV--NFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGC 174 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS----PNY--DFWKQ 169 A+ D ID++F R G ++QV I P D Q+ S P + + +KQ Sbjct: 175 LAVGDLAIDQLFILAR---RVGLKNIQVIIAP---NDLRYQKPSTSTFAQPRWLPELYKQ 228 Query: 170 LKPGYDYFEQTR 181 + F++T+ Sbjct: 229 ISESLKPFKKTK 240 >ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 Length = 139 Score = 175 bits (444), Expect = 7e-43 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 2 KVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML-- 54 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + NP+S + +I+I +PNA D A G +MIHG + Sbjct: 55 DWRNPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTD 114 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+TD+ +DEI+A V D Sbjct: 115 GCIAVTDSDMDEIWAMVADG 134 >gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099] Length = 163 Score = 175 bits (444), Expect = 7e-43 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 24 KVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML-- 76 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + NP+S + +I+I +PNA D A G +MIHG + Sbjct: 77 DWRNPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTD 136 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+TD+ +DEI+A V D Sbjct: 137 GCIAVTDSDMDEIWAMVADG 156 >DUF949_Q60B45_95-280_PF06104.2 Length = 186 Score = 172 bits (437), Expect = 4e-42 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW A+ G +Y+LI+ Y I SG GPK R+GD Sbjct: 1 PYFERAGVAFPPREVVLVGLKQEKKLELW-ARDGSDYRLIRHYDIQAASGSAGPKLRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D H G + IHG VS G Sbjct: 60 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 118 CLAMGDEAIEELFVLTA---QVGKENVKVVIAP 147 >gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath] Length = 292 Score = 172 bits (437), Expect = 5e-42 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW A+ G +Y+LI+ Y I SG GPK R+GD Sbjct: 95 PYFERAGVAFPPREVVLVGLKQEKKLELW-ARDGSDYRLIRHYDIQAASGSAGPKLRQGD 153 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D H G + IHG VS G Sbjct: 154 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 211 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 212 CLAMGDEAIEELFVLTA---QVGKENVKVVIAP 241 >gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] Length = 167 Score = 171 bits (435), Expect = 7e-42 Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 33/158 (20%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 L G + + K ERKL L ++KSY + GPK EGD ++PEGFY Sbjct: 23 SLEGKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFY 77 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------- 110 + + + + Y L+++I +PNA D A G +MIHG Sbjct: 78 WIDWRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTL 135 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E+++ V+D + + I P Sbjct: 136 DWTNGCIAMNNTDMREVWSVVKDGTL-------IEIRP 166 >gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] Length = 160 Score = 168 bits (427), Expect = 6e-41 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 28/152 (18%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G V + ++K ER + L +++SY I G K EGD ++PEG Y Sbjct: 23 YDGPQVTRVLVYKGERMMYLMHNND-----VLESYEIELGFAPEGHKLEEGDGRTPEGEY 77 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVGC 115 + ++ NP+S++YL+I I +PN D A G + IHG +VGC Sbjct: 78 MI--DRRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGC 135 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 A+T+A++ +I+A V + +SIYP Sbjct: 136 IAVTNAEMRQIYAMVENG-------TPISIYP 160 >gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella burnetii RSA 493] Length = 233 Score = 168 bits (427), Expect = 6e-41 Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K P + + +FK +++LW AK G ++ I+S+PI SGG GPK +GD Sbjct: 54 PYFKRAGVSYPPKDISLLVFKNSHRVQLW-AKDRGPWRYIRSFPILASSGGPGPKLHDGD 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + NP SR+ L++ + +PN+ DR + G + IHG+ S+G Sbjct: 113 HQVPEGVYKIV--GFNPASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIG 170 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C + + I+++F A++ G+ ++V I P Sbjct: 171 CIPIGNKAIEQLFVL---AYLVGERHIKVIIAP 200 >gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 162 Score = 168 bits (427), Expect = 7e-41 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 27/147 (18%) Query: 9 QLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + G PV I + K RK+ L E +++ Y + +G K+ EGD ++PEG Sbjct: 18 RYNGPPVTSIVVNKGSRKMYLLN-----ESKVLTEYKVGLGFAPVGHKQVEGDGRTPEGT 72 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------ 110 Y + ++ NP S++YL++ I +PN+ DRAH G + IHG Sbjct: 73 YLI--DRRNPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRRAARV 130 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFV 135 + GC A+T+ +I+EI++ V + + Sbjct: 131 RDWTAGCIAVTNDEIEEIWSMVNNGTL 157 >gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 140 Score = 167 bits (424), Expect = 1e-40 Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 27/144 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K R++ L + + +++SY I +G K +EGD ++PEG Y++ ++ N Sbjct: 11 IVVYKSRREMLLLRGES-----ILRSYRIALGRDPIGHKFQEGDGRTPEGCYTI--DRRN 63 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------ACVSVGCYAMTDAQI 123 P S+Y+L+++I +P A D G +MIHG + + GC A+++ ++ Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 DEI++ V D + I P Sbjct: 124 DEIWSLVPDG-------TPIEILP 140 >ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 Length = 139 Score = 167 bits (424), Expect = 2e-40 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + + K ERKL L ++KSY + GPK EGD ++PEGFY + Sbjct: 1 GKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 + + + Y L+++I +PNA D A G +MIHG + Sbjct: 56 WRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFV 135 GC AM + + E+++ V+D + Sbjct: 114 NGCIAMNNTDMREVWSVVKDGTL 136 >gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 171 Score = 167 bits (423), Expect = 2e-40 Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 30/154 (19%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G P+ I + K +RK+ L K +++KSY + + GPK+ EGD ++PEG Y Sbjct: 32 YQGPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDGRTPEGMY 86 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG----------ACVSV 113 + ++ NP SRY+L++ I +P+A D A G + IHG A + Sbjct: 87 FI--DRFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRALNRADWTA 144 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+TD +I+EIF +R P V + IYP Sbjct: 145 GCIAVTDEEIEEIFTMLR-------PGVPIFIYP 171 >gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protein conserved in bacteria [Psychrobacter cryohalolentis K5] Length = 187 Score = 166 bits (422), Expect = 2e-40 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 28/151 (18%) Query: 4 KELKQQLPGSPVYIRIF--KEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 E KQ + + + ++F K R L+L ++IKSY I +G K+++GD Sbjct: 37 SENKQAMLNNIMIDKVFVDKSARTLQLLSDN-----KVIKSYHIALGGNPVGHKQQQGDK 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA------- 109 ++P G Y + + N S++Y +I++ +PNA D+A G +MIHG Sbjct: 92 RTPTGSYIL--DYKNEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHL 149 Query: 110 -------CVSVGCYAMTDAQIDEIFAFVRDA 133 + GC A+TD ++DEI A V Sbjct: 150 AAINQQRDWTDGCIAVTDNEMDEIMAAVEIG 180 >gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 188 Score = 166 bits (421), Expect = 3e-40 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 33/156 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G + I K E + L + + +++K Y I G K +EGD ++P+G Y++ Sbjct: 47 MGKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTL 101 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CV 111 + PDS YY +I+I +PN D+ G +MIHG Sbjct: 102 DYKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNW 159 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+A++DE++ V + + I+P Sbjct: 160 TDGCIAITNAEMDEVWKVVDEG-------TPIEIWP 188 >gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudomonas putida KT2440] Length = 184 Score = 164 bits (417), Expect = 8e-40 Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 33/164 (20%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 +Q + + + K ER+L+L + +K+Y I G K REGD + Sbjct: 35 PSPSQQAMQPLIDKVLVIKSERRLQLISRG-----EPLKTYRISLGKQPKGAKEREGDKK 89 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC------- 110 +PEG Y + + + R+ LA++I +PN D A G +MIHG Sbjct: 90 TPEGLYWLDWRKQS--DRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPE 147 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E++ VRD + + I P Sbjct: 148 WYFHTLDWTDGCIAMRNRDMQEVWDLVRDGTL-------IEIRP 184 >DUF949_Q6LJZ6_66-236_PF06104.2 Length = 171 Score = 164 bits (416), Expect = 1e-39 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 12/152 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW AK G + IK Y I K SG GPK REGD Sbjct: 2 MFEQVGVQYPPEQIAMFALKEEMQVELW-AKDGEAWVYIKRYDIAKISGKSGPKLREGDH 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 61 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 118 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM D I+E+F V A + +VQV I P Sbjct: 119 LAMGDIAIEELFLLVERAQI---QNVQVVISP 147 >gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 187 Score = 164 bits (415), Expect = 1e-39 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y I G K +EGD ++PEGFY + Sbjct: 48 PIDKVLVLKSARQLQLISGG-----EALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDW 102 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +M+HG + Sbjct: 103 RK--PSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN 160 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+ + + EI+ V+D Sbjct: 161 GCIALKNNDMREIWDLVKDG 180 >gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 172 Score = 164 bits (415), Expect = 2e-39 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 26/138 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ERKL L Q +KSY + GPKRREGD ++PEG Y + + Sbjct: 37 ILVVKSERKLMLLSRG-----QPLKSYKVSLGKRPTGPKRREGDQRTPEGLYWIDWRK-- 89 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCYA 117 +Y L+++I +PN D+A G +M+HG + GC A Sbjct: 90 ASDKYNLSMHISYPNIRDQAQARAEGVPPGGMIMLHGTPLDENYPEWYFHGLDWTEGCIA 149 Query: 118 MTDAQIDEIFAFVRDAFV 135 M + I E+++ V+D + Sbjct: 150 MRNDDIREVWSLVKDGTL 167 >gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewanella oneidensis MR-1] Length = 171 Score = 163 bits (413), Expect = 2e-39 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 33/155 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 31 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 85 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVS 112 + DS YY +I+I +PN D+ G +MIHG + Sbjct: 86 YKK--SDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 143 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+A++DE++ V + + I+P Sbjct: 144 DGCIAITNAEMDEVWKAVDEG-------TPIEIWP 171 >gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 175 Score = 163 bits (413), Expect = 3e-39 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 33/163 (20%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 ++ P + + ++K +R LEL + LI+SY + +GPK R GDF++ Sbjct: 27 QDPDLASPPTVDRVVVYKSKRLLELRSGQN-----LIRSYRVALGRNPVGPKVRAGDFRT 81 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC-------- 110 PEG Y + L SR++ +I+I +PN D A G +MIHG Sbjct: 82 PEGIYRLDRRSL--QSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGP 139 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+A++ EI+ VR+ + I P Sbjct: 140 SHASFDWTKGCIAVTNAEMTEIWHLVRNG-------TPIEILP 175 >gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pseudomonas syringae pv. tomato str. DC3000] Length = 208 Score = 162 bits (412), Expect = 4e-39 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 69 KIDKVLVLKSARQLQLISGG-----EALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 123 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 124 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 181 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+ + + EI+ V+D Sbjct: 182 GCIALKNNDMREIWDLVKDG 201 >gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] Length = 246 Score = 162 bits (411), Expect = 4e-39 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 12/152 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW AK G + IK Y I K SG GPK REGD Sbjct: 67 MFEQVGVQYPPEQIAMFALKEEMQVELW-AKDGEAWVYIKRYDIAKISGKSGPKLREGDH 125 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 126 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 183 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM D I+E+F V A + +VQV I P Sbjct: 184 LAMGDIAIEELFLLVERAQI---QNVQVVISP 212 >ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 Length = 138 Score = 162 bits (410), Expect = 6e-39 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 1 KIDKVLVLKSARQLQLISGG-----EALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 55 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 56 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 113 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+ + + EI+ V+D Sbjct: 114 GCIALKNNDMREIWDLVKDG 133 >gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 213 Score = 162 bits (410), Expect = 6e-39 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 32/156 (20%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G PV + + K R++ L ++K+Y I + LG K+ EGD ++PEG Y Sbjct: 72 YSGPPVTQVVVNKGARQMLLLNGN-----TVLKAYRIGLGNEPLGHKQFEGDGKTPEGLY 126 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG------------ACV 111 + ++ NPDSRY+L+I I +PN +D G + IHG Sbjct: 127 YI--DRRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSRLRQDW 184 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+TDA++++I+A VRD + I P Sbjct: 185 TAGCIAVTDAEVEDIYAMVRDG-------TPIMITP 213 >gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 334 Score = 161 bits (408), Expect = 9e-39 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 33/150 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I K +R+L L+ + +KSY I GPK REGD ++PEG Y + + N Sbjct: 199 ILIEKGDRRLTLFSRN-----EALKSYRIALGGAPSGPKEREGDNKTPEGAYVI--DSKN 251 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVSVGCYA 117 +S+Y+L+++I +PN D+ G +MIHG A + GC A Sbjct: 252 GNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTRGCVA 311 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 ++D +I+EI+ V Q V I P Sbjct: 312 VSDEEIEEIYKLV-------QIGTAVEIRP 334 >gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5] Length = 167 Score = 161 bits (408), Expect = 1e-38 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 27/144 (18%) Query: 10 LPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 L G + + + K +L+L + +K+Y I GPK EGD ++PEG Y Sbjct: 24 LDGKVIEKVLVLKSAHQLQLINGG-----KPLKTYRISLGKKPKGPKLMEGDKRTPEGLY 78 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------- 110 + + + RY LA++I +PN D A G +MIHG Sbjct: 79 WLDWRKTS--DRYNLAMHISYPNITDAARSRREGVDPGGMIMIHGTPDTEEFPEQYFHTL 136 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDA 133 + GC AM + + E++ V+D Sbjct: 137 DWTDGCIAMRNVDMREVWGLVKDG 160 >gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 167 Score = 160 bits (405), Expect = 2e-38 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 33/159 (20%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 Q + + K E +L + + + +++KSY I G K +EGD ++P+G Sbjct: 23 SQTTAKVDLVVVNKSESRLSVMR-----DGRVVKSYLIAMGDVPSGHKLKEGDQRTPQGR 77 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA------------- 109 Y + + DS +Y +I+I +PN D+ G +MIHG Sbjct: 78 YVLDYKK--SDSAFYKSIHISYPNEEDKLRADALGIRAGGMIMIHGENPRSTLPPEEAQK 135 Query: 110 -CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+ ++DE++ + + I+P Sbjct: 136 YNWTNGCIAVTNKEMDELWQMIDAG-------TPIEIWP 167 >gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 333 Score = 159 bits (403), Expect = 4e-38 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 26/143 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S I I K+ R++ L ++K+Y I +GPK R+GD ++PEG Y++ Sbjct: 193 PSLDKILIEKQARRMMLISKG-----AVLKTYRIALGGDPIGPKERQGDNKTPEGAYTID 247 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 N DSRY+ A++I +PN DR G +MIHG + Sbjct: 248 AR--NRDSRYHRALHISYPNERDRKRARELGVSPGGNIMIHGIKNGFSWVGDAHAGVDWT 305 Query: 113 VGCYAMTDAQIDEIFAFVRDAFV 135 GC A+TD +I+EI + + Sbjct: 306 KGCIAVTDEEIEEIDTLAPNGTI 328 >gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 171 Score = 159 bits (402), Expect = 5e-38 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 27/137 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG-GLGPKRREGDFQSPEGFYSVQPNQL 75 + + K +L+L + + +KSY I G GPK EGD ++PEGFY + + Sbjct: 35 VLVLKSAHQLQLIA-----DGKPLKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRKT 89 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCY 116 + ++ L+++I +PN D A G +MIHG + GC Sbjct: 90 SE--KFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCI 147 Query: 117 AMTDAQIDEIFAFVRDA 133 AM + + E++ V D Sbjct: 148 AMRNVDMREVWNLVPDG 164 >ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 Length = 138 Score = 158 bits (401), Expect = 6e-38 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 26/138 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + K ER+L+L + +K+Y I G K REGD ++PEG Y + + + Sbjct: 5 VLVIKSERRLQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKQS 59 Query: 77 PDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VSVGCYA 117 R+ LA++I +PN D A G +MIHG + GC A Sbjct: 60 --DRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIA 117 Query: 118 MTDAQIDEIFAFVRDAFV 135 M + + E++ VRD + Sbjct: 118 MRNRDMQEVWDLVRDGTL 135 >ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 Length = 139 Score = 157 bits (399), Expect = 1e-37 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 26/143 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I I K RK+ L + +++K Y + G K+ EGD ++PEG Y + Sbjct: 1 PAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLI- 54 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VS 112 ++ NP+S ++L++ I +PN+ D A+ G + IHG + Sbjct: 55 -DRRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFV 135 GC A+ + +I+EI+A VRD V Sbjct: 114 AGCIAVKNDEIEEIYAMVRDGTV 136 >gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 165 Score = 157 bits (398), Expect = 1e-37 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K E +++++ +LIKSY I G K +EGD ++P+G Y + Sbjct: 26 KVDLVVVNKAEAQMQVFYRG-----ELIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDF 80 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS YY +I+I +PN D G +MIHG + Sbjct: 81 KK--ADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTN 138 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+ +DE++ + P + I+P Sbjct: 139 GCIAVTNRDMDELWQLI-------DPGTPIEIWP 165 >gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str. N16961] Length = 194 Score = 157 bits (398), Expect = 1e-37 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 33/149 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +++ K +R++ L + ++I+ Y I G K++EGD ++PEG Y + + + Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLL--DFI 110 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVGCY 116 DS +Y +I+I +PN D G + IHG + GC Sbjct: 111 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 A+T+ ++DE + V QP V + I Sbjct: 171 AITNQEMDEFLSLV-------QPGVPILI 192 >gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 166 Score = 156 bits (396), Expect = 2e-37 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 29/154 (18%) Query: 9 QLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + G PV +++ K +RK+ L ++++ Y + G K+ EGD ++PEG Sbjct: 27 KYDGPPVTSVQVHKADRKMYLLNGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGV 81 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG---------ACVSV 113 Y + ++ NP S Y+L++ I +PN D+ G + IHG + Sbjct: 82 YFI--DRQNPRSTYHLSLGISYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTA 139 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+TD +++E+++ VR + I P Sbjct: 140 GCIAITDDEVEEVYSMVRLG-------TPIYILP 166 >gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 167 Score = 156 bits (396), Expect = 2e-37 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 30/162 (18%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDF 61 S + P +R+ K R+L L A + ++S+ I LG KR EGD Sbjct: 19 SASANEIRPEDIASVRVEKSARRLLLLDA----DGATLRSFSNIQLGDAPLGHKRFEGDE 74 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 ++PEG Y + N S Y+L+++I +P+A DRA+ G + IHG Sbjct: 75 RTPEGRYVIDHG--NARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFIHGQPNSLASG 132 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+++A+IDEI+A V D + I P Sbjct: 133 RIEGDWTDGCIALSNAEIDEIWALVGDG-------TPIEIVP 167 >gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 186 Score = 156 bits (395), Expect = 3e-37 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 26/136 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K R L L + + + I+SY I + G K+ EGD ++PEG Y + + N Sbjct: 49 ILVIKSTRALHLLR-----DGETIRSYDISLGAAPEGHKQSEGDERTPEGRYEI--DWRN 101 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCYA 117 P+S +L+++I +PNA D+A G +MIHG + GC A Sbjct: 102 PNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCIA 161 Query: 118 MTDAQIDEIFAFVRDA 133 +T+A++ EI++ V D Sbjct: 162 VTNAEMREIWSLVPDG 177 >gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 202 Score = 156 bits (394), Expect = 4e-37 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 26/145 (17%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + I I K RK+ L + +++K Y + G K+ EGD ++PEG Y Sbjct: 60 YGPAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYL 114 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC-------------- 110 + ++ NP+S ++L++ I +PN+ D A+ G + IHG Sbjct: 115 I--DRRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPD 172 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFV 135 + GC A+ + +I+EI+A VRD V Sbjct: 173 WTAGCIAVKNDEIEEIYAMVRDGTV 197 >gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 181 Score = 155 bits (392), Expect = 7e-37 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K ++ + + + + IKSY I G K +EGD ++P+G Y + Sbjct: 42 KVDLVVVNKSASRMSIIR-----DGKTIKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDY 96 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVSV 113 + DS +Y +I+I +PN D+ G +MIHG + Sbjct: 97 KK--SDSAFYKSIHISYPNEEDKLRADALGISPGGMIMIHGENPKSTLPPEEAQKYNWTN 154 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+ ++DE++ + +P + I+P Sbjct: 155 GCIAVTNKEMDELWRMI-------EPGTPIEIWP 181 >gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 155 bits (392), Expect = 7e-37 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ + N Sbjct: 78 IVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSI--DYKN 130 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------VSVGC 115 P S++ ++++ +PN D A+ G +MIHG ++GC Sbjct: 131 PKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGC 190 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI+A V++ Sbjct: 191 IAVTNKEIEEIYALVKE 207 >gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Erythrobacter litoralis HTCC2594] Length = 169 Score = 154 bits (391), Expect = 9e-37 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 36/164 (21%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREG 59 PVS E ++ + K +R L L++ + ++ Y + LG KR EG Sbjct: 25 PVSVEA-----PPVDFLLVDKSDRTLALYR-----DGAEVRRYTGLQFGDAPLGHKRFEG 74 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC---- 110 D ++PEG Y++ NP+S YYL++ + +PNA DRA+ G + +HG Sbjct: 75 DERTPEGRYTIDTR--NPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLP 132 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A T+A++DE++ VRD + I P Sbjct: 133 AGRMPGDWTDGCIAFTNAEMDELWRLVRDG-------TPIEIRP 169 >DUF949_Q83XL8_75-191_PF06104.2 Length = 117 Score = 154 bits (390), Expect = 1e-36 Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS 79 FK ERK+ELW E+ I YP+ +SG LGPK RE D Q PEG Y + NP S Sbjct: 1 FKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NFNPFS 58 Query: 80 RYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +L++ I +PN++DR GY G + IHG +SVGC A+ D ID++F R Sbjct: 59 SMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILARR 117 >gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 153 Score = 154 bits (390), Expect = 1e-36 Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 33/152 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 14 AVDLVKVDKSKRRMYLMEQG-----TILKEYRIALGASPKGHKQEEGDNRTPEGEYTL-- 66 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + + DS +Y +++I +P+A D G + IHG + Sbjct: 67 DYVIEDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTN 126 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+T+ ++DE V + I Sbjct: 127 GCIAITNEEMDEFIQLVEMG-------TPIQI 151 >gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 154 bits (389), Expect = 2e-36 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ + N Sbjct: 63 IVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSI--DYKN 115 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC----------------VSVGC 115 P S+Y A+++ +PN D +A G + G +MIHG + GC Sbjct: 116 PQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQGC 175 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI++ V++ Sbjct: 176 VAVTNPEIEEIYSLVKE 192 >ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 Length = 139 Score = 153 bits (388), Expect = 2e-36 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 26/141 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 1 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVS 112 + DS YY +I+I +PN D+ G +MIHG + Sbjct: 56 YKK--SDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDA 133 GC A+T+A++DE++ V + Sbjct: 114 DGCIAITNAEMDEVWKAVDEG 134 >gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] Length = 171 Score = 153 bits (388), Expect = 2e-36 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 26/139 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++I K ER++ L + + IK Y + G K +EGD ++PEG Y + + Sbjct: 35 LVKIDKSERRMYLLENG-----KTIKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYKK- 88 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVGCY 116 DS +Y A++I +PN D + G +MIHG + GC Sbjct: 89 -EDSSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGCI 147 Query: 117 AMTDAQIDEIFAFVRDAFV 135 A+T++++D+ + V+ Sbjct: 148 ALTNSEMDQFMSLVKVGTK 166 >gi|37675934|ref|NP_936330.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 161 Score = 152 bits (386), Expect = 3e-36 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 26/137 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ + + Sbjct: 25 WVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTL--DYV 77 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVGCY 116 +S +Y +++I +PN D G + +HG + GC Sbjct: 78 TEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCI 137 Query: 117 AMTDAQIDEIFAFVRDA 133 A+T+ ++DE V+ Sbjct: 138 ALTNQEMDEFIRLVKMG 154 >gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 192 Score = 152 bits (385), Expect = 5e-36 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 33/146 (22%) Query: 21 KEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSR 80 K ER L L+ +KSY I +G K R+GD ++PEG YS+ + NP S Sbjct: 61 KGERLLHLYSGG-----AAVKSYRIALGFNPVGAKLRQGDGKTPEGRYSIS--ERNPQSS 113 Query: 81 YYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VSVGCYAMTDA 121 Y+L++ I +P+ DR G + IHG + GC A+T+ Sbjct: 114 YHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGCIAVTND 173 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYP 147 +I+E++ V V IYP Sbjct: 174 EIEELWKAVPVG-------TPVIIYP 192 >gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 188 Score = 152 bits (385), Expect = 5e-36 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 27/137 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG-GLGPKRREGDFQSPEGFYSVQPNQL 75 I + K ++ + L + ++K+Y I S G K+REGD ++PEG Y + + Sbjct: 48 IVVSKGDKTMYLLRGDR-----ILKTYRIAMGSNWNQGHKQREGDERTPEGTYRI--DWR 100 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCY 116 NP S +L++++ +PNA D G +MIHG + GC Sbjct: 101 NPRSIAHLSLHVSYPNAEDSERARQAGYSPGGNIMIHGLPNGWGAMGRLHRLLDWTDGCI 160 Query: 117 AMTDAQIDEIFAFVRDA 133 A+T+ ++ EI++ + Sbjct: 161 AVTNDEMREIWSLTPNG 177 >ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 Length = 139 Score = 151 bits (381), Expect = 1e-35 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 26/137 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ + + Sbjct: 5 WVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTL--DYV 57 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVGCY 116 +S +Y +++I +PN D G + +HG + GC Sbjct: 58 TEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCI 117 Query: 117 AMTDAQIDEIFAFVRDA 133 A+T+ ++DE V+ Sbjct: 118 ALTNQEMDEFIRLVKMG 134 >ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 Length = 141 Score = 151 bits (381), Expect = 1e-35 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ + N Sbjct: 6 IVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSI--DYKN 58 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------VSVGC 115 P S++ ++++ +PN D A+ G +MIHG ++GC Sbjct: 59 PKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGC 118 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI+A V++ Sbjct: 119 IAVTNKEIEEIYALVKE 135 >gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633] Length = 165 Score = 151 bits (381), Expect = 2e-35 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 26 AVDLVKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTL-- 78 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + + DS +Y +++I +P+A D + G + IHG + Sbjct: 79 DYVIEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 138 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+T+ ++DE V Sbjct: 139 GCIALTNEEMDEFIQLVTMG 158 >ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 Length = 139 Score = 150 bits (380), Expect = 2e-35 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 26/140 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 2 AVDLVKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTL-- 54 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + + DS +Y +++I +P+A D + G + IHG + Sbjct: 55 DYVIEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 114 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC A+T+ ++DE V Sbjct: 115 GCIALTNEEMDEFIQLVTMG 134 >ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 Length = 141 Score = 149 bits (378), Expect = 3e-35 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ + N Sbjct: 6 IVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSI--DYKN 58 Query: 77 PDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC----------------VSVGC 115 P S+Y A+++ +PN D +A G + G +MIHG + GC Sbjct: 59 PQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQGC 118 Query: 116 YAMTDAQIDEIFAFVRD 132 A+T+ +I+EI++ V++ Sbjct: 119 VAVTNPEIEEIYSLVKE 135 >gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 209 Score = 143 bits (362), Expect = 2e-33 Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 37/169 (21%) Query: 1 PVSKELKQQLPGSPVY-----IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 P+ + Q P +P+ I + K R++ +++ G +++ I G K Sbjct: 56 PIFQRPPVQ-PEAPIASPVRRILVEKSARRMTVYQ--ESGPP---RTFRIALGFSPEGDK 109 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC 110 REGD ++PEG + + ++LN S Y+L++ I +P + R G +MIHG Sbjct: 110 SREGDGRTPEGIFRI--DRLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIHGQP 167 Query: 111 ------------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+ +A+I+EIFA R +V I P Sbjct: 168 NQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHARIG-------TEVEILP 209 >gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 309 Score = 142 bits (358), Expect = 5e-33 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 26/128 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y + Sbjct: 169 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVI- 222 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 223 -EGRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 281 Query: 113 VGCYAMTD 120 GC A+TD Sbjct: 282 QGCIAVTD 289 >ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 Length = 139 Score = 140 bits (353), Expect = 2e-32 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 26/128 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y + Sbjct: 1 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVI- 54 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 55 -EGRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 113 Query: 113 VGCYAMTD 120 GC A+TD Sbjct: 114 QGCIAVTD 121 >gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 124 Score = 133 bits (335), Expect = 3e-30 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 21/115 (18%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYD--R 95 ++K Y + + G K++EGD ++PEG YS+ + DS +Y A++I +PNA D + Sbjct: 5 TVVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYKK--EDSAFYRAMHISYPNAEDVRK 62 Query: 96 AHGY---TGKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDA 133 A G ++M+HG + GC A+T++ +DE V+ Sbjct: 63 AKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCIALTNSDMDEFMDKVKVG 117 >gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100] Length = 209 Score = 132 bits (334), Expect = 4e-30 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 34/155 (21%) Query: 1 PVSKEL--KQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG 53 P +KE K + +P+ ++ + K+ R L + + Q++ +Y + G Sbjct: 50 PRAKEFAEKARWDHAPISQKLDFVLVDKKRRMLHVMR-----HGQVLATYAVALGGNPQG 104 Query: 54 PKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIH 107 K+ EGD ++PEG Y + S Y+L + I +PNA D A G ++IH Sbjct: 105 HKKNEGDQRTPEGRYFFDLKK--AKSEYHLGLRINYPNARDLAEAKKNGIKNPGDSILIH 162 Query: 108 GAC--------------VSVGCYAMTDAQIDEIFA 128 G + GC A+ + +I+EI+A Sbjct: 163 GLPNSWVKRKVIRHPRDWTKGCMAVRNYEIEEIYA 197 >DUF949_Q83CG1_72-171_PF06104.2 Length = 100 Score = 122 bits (308), Expect = 4e-27 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 9/103 (8%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 +FK +++LW AK G ++ I+S+PI SGG GPK +GD Q PEG Y + NP Sbjct: 1 VFKNSHRVQLW-AKDRGPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPA 57 Query: 79 SRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGC 115 SR+ L++ + +PN+ DR + G + IHG+ S+GC Sbjct: 58 SRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGC 100 >gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 223 Score = 115 bits (288), Expect = 9e-25 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 39/146 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K +R+L L + L++ YPI G K GD ++PEG + + N Sbjct: 75 IYVYKSDRRLLLVNNGV-----LVREYPIGLGFSPNGDKFMRGDGRTPEGQFFICAK--N 127 Query: 77 PDSRYYLAINIGFPNAYDRAHG----------------------YT------GKYLMIHG 108 P+SR+Y ++ + +P+ G + IHG Sbjct: 128 PNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVLGGDIFIHG 187 Query: 109 ----ACVSVGCYAMTDAQIDEIFAFV 130 + GC A+ ++ +DE+F+ V Sbjct: 188 GGAGRDWTWGCVAVRNSAMDELFSIV 213 >gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 415 Score = 110 bits (276), Expect = 2e-23 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 14/122 (11%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---PN 73 I + +L L+ G +LI Y I G K ++GD ++P G Y V P Sbjct: 155 IAVDLTRSRLFLF-DNREGMPKLIADYYISSGKKG-AEKIKQGDKRTPAGLYYVTEYIPG 212 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAMTDAQID 124 + PD A+ I +PN +DR H TG + +HG S GC A+T+ + Sbjct: 213 EKLPDLYGAGAMPINYPNEWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLDFE 272 Query: 125 EI 126 E+ Sbjct: 273 EL 274 >gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] Length = 325 Score = 107 bits (267), Expect = 2e-22 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 14/128 (10%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + K ++ L ++ G Q + I +G +G K+ EGD ++P GFY + + Sbjct: 67 IVLTNKTDKILRVYSYSDGKIKQDFEQKAI--ITGLMGDKQVEGDLKTPVGFYELG-RKF 123 Query: 76 NPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAMTDAQID 124 NP YY A +PN D+ G TG + IHG + GC A+ + ++ Sbjct: 124 NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIALFNENLE 183 Query: 125 EIFAFVRD 132 E V+D Sbjct: 184 EFAKVVQD 191 >gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 431 Score = 102 bits (256), Expect = 4e-21 Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKA--KMGGEYQLIKSYPICKWSGGLGPKRREG 59 V + L Q P I + + +L L++ K G + + Y I G K EG Sbjct: 154 VPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYITHGKLG-AEKLVEG 212 Query: 60 DFQSPEGFYSVQ---PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----- 111 D ++P G Y V P Q D A + +PN +D+ G G + +HG Sbjct: 213 DKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGGSGIWLHGTPSNTFAR 272 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 S GC +T+ +D V G V +S Sbjct: 273 PPRASDGCVVLTNQDLD----VVAKNLQVGLTPVIIS 305 >gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 325 Score = 100 bits (251), Expect = 2e-20 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 14/128 (10%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + K ++ L ++ + G + + I +G +G K+ EGD ++P GFY + + Sbjct: 67 IVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKF 123 Query: 76 NPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAMTDAQID 124 NP YY A +PN D+ G TG + IHG + GC A+ + ++ Sbjct: 124 NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLE 183 Query: 125 EIFAFVRD 132 + V+D Sbjct: 184 KFAKVVQD 191 >gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] Length = 316 Score = 99.4 bits (247), Expect = 4e-20 Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 14/128 (10%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + ++ K ++ L+++ G + + + +G +G K +EGD ++P GFY + + Sbjct: 57 MIVKTNKNDKILKVFSYTNGKIKKEFEQKEV--ITGLMGDKEKEGDLKTPVGFYELG-MK 113 Query: 75 LNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAMTDAQI 123 NP +YY A +PN D+ TG + IHG + GC A+ + ++ Sbjct: 114 FNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCIALFNDKL 173 Query: 124 DEIFAFVR 131 ++ V Sbjct: 174 EDFAKIVA 181 >gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens DSM 15236] Length = 414 Score = 97.1 bits (241), Expect = 2e-19 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 19/139 (13%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I I +L L + + G LI Y + GL K EGD ++P G Y + N L Sbjct: 155 AIAIDASRSRLYLLENRPTG-LTLIADYYVSIGKSGLS-KNAEGDLRTPMGVYFITSN-L 211 Query: 76 NPDS--RYYLA--INIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAMTDAQ 122 +P S +Y + + I +PN D G TG + +HG + GC + + Sbjct: 212 DPKSLKDFYGSGALPINYPNVLDNLRGKTGGGIWLHGTPPGQFSRPPLATDGCVVLANPD 271 Query: 123 IDEIFAFVRDAFVGGQPSV 141 + A +R V P V Sbjct: 272 ---LMALIRTVEVRTTPVV 287 >gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted protein, putative [Campylobacter lari RM2100] Length = 323 Score = 93.2 bits (231), Expect = 3e-18 Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 14/134 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ + ++ G + + +G G K EGD ++P GFY Sbjct: 60 YEENVAIVLTNKSDKIIRVYHYNDGKVEKKFIQKDVL--TGLAGDKEIEGDLKTPIGFYE 117 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + + P YY A +PN D+ G TG + IHG + GC A+ Sbjct: 118 LG-KKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAV 176 Query: 119 TDAQIDEIFAFVRD 132 + +++ V D Sbjct: 177 QNDLLEDFNKLVAD 190 >gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 224 Score = 91.3 bits (226), Expect = 1e-17 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 46/163 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++KE+R+L + ++ + L++ YPI G K R+GD ++PEG + + + Sbjct: 76 IFVYKEKRRLYVIQSNV-----LVRDYPIGLGPHPSGDKDRDGDGRTPEGDFFIIVKGSS 130 Query: 77 PDSRYYLAINIGFPNAYDRAHGY----------------------------TGKYLMIHG 108 + ++ I +P Y G + IH Sbjct: 131 ERLK--KSLAISYPGRGHAEKAYFSGVITPLEFRDILRAADNRSAPPSGTVLGGKIFIHA 188 Query: 109 ----ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + G A+ D+ ++E+F VSI P Sbjct: 189 GGAHKDWTDGSIALYDSDMEELFTVASVG-------TPVSIRP 224 >gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 417 Score = 87.9 bits (217), Expect = 1e-16 Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 19/148 (12%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 P + + + +L ++ + + Y I G K EGD ++P G Y Sbjct: 150 MSPEQRYAVVVDTTKSRLYVY-QNRDSQLHHLVDYYITMGKNGS-EKFTEGDKRTPLGIY 207 Query: 69 SVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYA 117 PD A + +PN D+ HG G + +HG S GC Sbjct: 208 IADKKLEHKLPDFYGEAAYPLNYPNPLDKRHGKKGHGIWLHGTPQDVYSRPPKASDGCVV 267 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + + I + A V Q + V I Sbjct: 268 IANPDIKAL------APVLQQGATPVII 289 >gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100] Length = 332 Score = 87.5 bits (216), Expect = 2e-16 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 19/141 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-- 74 I + KE+RKL +++ G + Q I YP G G K + D ++PEG Y +Q Sbjct: 52 ILVDKEQRKLSVFERN-GEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQERLSQ 109 Query: 75 -LNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGACVSV-------GCYAMTDAQIDE 125 P S Y LA +PN +D+ TG + +H SV GC + + I + Sbjct: 110 PKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRNDVIKK 169 Query: 126 IFAFVRDAFVGGQPSVQVSIY 146 + +++ + I+ Sbjct: 170 LADYIKLG------ETPILIF 184 >ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 Length = 137 Score = 85.5 bits (211), Expect = 6e-16 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 13/128 (10%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-- 74 I + KE+RKL +++ G + Q I YP G G K + D ++PEG Y +Q Sbjct: 6 ILVDKEQRKLSVFERN-GEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQERLSQ 63 Query: 75 -LNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGACVSV-------GCYAMTDAQIDE 125 P S Y LA +PN +D+ TG + +H SV GC + + I + Sbjct: 64 PKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRNDVIKK 123 Query: 126 IFAFVRDA 133 + +++ Sbjct: 124 LADYIKLG 131 >gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein conserved in bacteria [Desulfovibrio desulfuricans G20] Length = 429 Score = 85.5 bits (211), Expect = 6e-16 Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 28/180 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P ++ + K + L L+ + ++ +Y C G K+ EGD ++PEG Y V+ Sbjct: 41 PPRFVAVDKSRQTLFLY--RHSSPLEVSATYT-CTTGQATGDKQVEGDLRTPEGVYFVEH 97 Query: 73 N---QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQI 123 L+ D +A + +PN D TG + IHG + GC A+ A I Sbjct: 98 RIDKGLDWDLYGGIAYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADI 157 Query: 124 DEIF--------AFVRDAFV--GGQPSVQVSIYPFRMTDANMQ------RHRNSPNYDFW 167 + + V G QP + R+ Q + R+ +DF+ Sbjct: 158 EVLGPGLERGLPVIVAQGVNATGAQPEAERGAATARLLAQRSQQWAAAWQARSDDFFDFY 217 >gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_2069 [Prosthecochloris aestuarii DSM 271] Length = 124 Score = 85.2 bits (210), Expect = 1e-15 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 LP + + K++R L L+ + ++KSY I G KR GD ++PEG Y Sbjct: 44 SLPVEADSLVVSKDDRLLHLYS-----DGAVVKSYTIALGFSPRGAKRYLGDGRTPEGRY 98 Query: 69 SVQPNQLNPDSRYYLAINIG 88 ++ NP SRY+L+++I Sbjct: 99 TII--GRNPQSRYHLSLSIS 116 >gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [Thiomicrospira denitrificans ATCC 33889] Length = 321 Score = 83.2 bits (205), Expect = 3e-15 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 32 KMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD--SRYY--LAINI 87 ++ K Y G K +EGD ++P G Y + +Y A Sbjct: 80 DENQNFKFKKKYS-AFTGKMKGDKIKEGDLRTPTGIYQITQKLSKETKLDPFYGPFAFVT 138 Query: 88 GFPNAYDRAHGYTGKYLMIHGACV------SVGCYAMTDAQID 124 +PN YD G G + IHG + GC A+ ++ I+ Sbjct: 139 SYPNVYDTYKGKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIE 181 >gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes] Length = 322 Score = 83.2 bits (205), Expect = 3e-15 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 12/111 (10%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS 79 K +L L++ +L + G KR EGD ++P G Y + +L Sbjct: 71 DKALSELSLYQLGGKKPERLAHTK--ALMGSKKGDKRIEGDLKTPIGVYDLTA-KLTRLD 127 Query: 80 RYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC-------VSVGCYAMTDA 121 + Y LA +PN YD +G + IHG + GC A+ + Sbjct: 128 QLYGPLAFVTSYPNLYDSLQKKSGSGIWIHGLPLNGDREINTKGCIAIDNQ 178 >gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5] Length = 397 Score = 78.2 bits (192), Expect = 1e-13 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 37/150 (24%) Query: 2 VSKELKQQLPGSPVYI---------RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 + K K+ PV + + K + L ++K K +L YP+ + Sbjct: 119 LEKRFKEA---PPVLVENPENHYVFLVEKMSQYLFVFKGK-----KLEGMYPVTTGMN-I 169 Query: 53 GPKRREGDFQSPEGFYS----VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMI 106 G K REGD ++PEG Y + P QL S Y +A+ + +PN YD+ G TG + + Sbjct: 170 GDKEREGDGKTPEGVYYFTRFIPPEQL---SEIYGGIAVALNYPNPYDKLLGKTGSGIWL 226 Query: 107 HGAC---------VSVGC-YAMTDAQIDEI 126 HG+ + GC A TD EI Sbjct: 227 HGSNEKDRDKLPFSTRGCVVAQTDVLKTEI 256 >gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protein [Helicobacter pylori 26695] Length = 330 Score = 77.1 bits (189), Expect = 2e-13 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 13/121 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 K + LE ++ + + I S G K EGD +P G Y Sbjct: 64 YQNKQFLFVANKSKPSLEFYEIE-NNMLKKINSSK-ALVGSKKGDKTLEGDLATPIGVYR 121 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMT 119 + +L +YY LA +PN YD TG + +HG + GC A+ Sbjct: 122 IT-QKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIE 180 Query: 120 D 120 + Sbjct: 181 N 181 >gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 171 Score = 77.1 bits (189), Expect = 3e-13 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 23/137 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P I + E +L L +A +P+ S G KR EGD ++P G Y++ Sbjct: 35 PPVDALILVDTAEHRLALCEAGAAAAV-----FPVALGSAGT-EKRAEGDRRTPLGAYAL 88 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCY 116 + P + + I IG+P A R G TG + IHG A + GC Sbjct: 89 GTPR--PSAGFGTFIPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCV 146 Query: 117 AMT-DAQIDEIFAFVRD 132 A+ D ++ + AFV Sbjct: 147 ALGSDPEVAAVAAFVER 163 >gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 175 Score = 76.3 bits (187), Expect = 4e-13 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 23/136 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P S + + + R+L L + + G+G KRR GD ++P G Y + Sbjct: 39 PRSRDAVVVVTDRRELWLCSGG-----APAAQFTVALGRSGVG-KRRRGDGRTPLGTYPL 92 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCY 116 + +P +Y I I +P A G+TG + IHG + GC Sbjct: 93 GDPRPSP--QYGTFIPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCI 150 Query: 117 AM-TDAQIDEIFAFVR 131 A TD +D I AFVR Sbjct: 151 ATGTDGDVDAIAAFVR 166 >ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 Length = 133 Score = 72.8 bits (178), Expect = 4e-12 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 11/82 (13%) Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYTGKYLMIH- 107 G K EGD ++PEG Y ++ + Y L A + +PN DR +G + IH Sbjct: 39 GDKVAEGDLRTPEGIYFIE-GKRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHS 97 Query: 108 -GACV----SVGCYAMTDAQID 124 G + + GC A+ ID Sbjct: 98 KGRDITPRETRGCIALNRGDID 119 >gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 429 Score = 72.8 bits (178), Expect = 4e-12 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 11/82 (13%) Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYTGKYLMIH- 107 G K EGD ++PEG Y ++ + Y L A + +PN DR +G + IH Sbjct: 79 GDKVAEGDLRTPEGIYFIE-GKRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHS 137 Query: 108 -GACV----SVGCYAMTDAQID 124 G + + GC A+ ID Sbjct: 138 KGRDITPRETRGCIALNRGDID 159 >gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methylococcus capsulatus str. Bath] Length = 177 Score = 70.9 bits (173), Expect = 2e-11 Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 45/166 (27%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q ++ + + L++ + ++ I G G +R D ++P G Y Sbjct: 14 QSENPDPWLLVETKPHVLKVMQGDT--PVEVFT--KIAIGQHGAGVDKRRNDNKTPLGEY 69 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY----------------------------T 100 + +N +S+++ + +PN G+ Sbjct: 70 RI--GWINENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQDTPL 127 Query: 101 GKYLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFV 135 G + IHG + GC A+T+ QID++ +VR + Sbjct: 128 GGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTL 173 >ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 Length = 160 Score = 69.8 bits (170), Expect = 4e-11 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 41/131 (31%) Query: 44 PICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY---- 99 I G G +R D ++P G Y + +N +S+++ + +PN G+ Sbjct: 29 KIAIGQHGAGVDKRRNDNKTPLGEYRI--GWINENSKFHRFFGLTYPNPEIAKRGFIRGL 86 Query: 100 ------------------------TGKYLMIHGA-----------CVSVGCYAMTDAQID 124 G + IHG + GC A+T+ QID Sbjct: 87 IDEQLVRHILRAHLVEATPPQDTPLGGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQID 146 Query: 125 EIFAFVRDAFV 135 ++ +VR + Sbjct: 147 QLTPWVRKGTL 157 >gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 68.2 bits (166), Expect = 1e-10 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 45/161 (27%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 +++ I E L++++ G+ ++ + P+ GG R++G +P G + + Sbjct: 31 EIWVLIDDREATLDIYR----GDTRIERFEPVSLGRGGTARVRKQGSNMTPTGEFHIN-- 84 Query: 74 QLNPDSRYYLAINIGFP-----------------------NAYDRAHGYT-----GKYLM 105 ++N +S++ + + + +P +AY R G Y+ Sbjct: 85 RINRESKFNIFLGLDYPKLETAREAMRAGLMSPAEYADFQDAYYRNGAPPQDTVLGGYIG 144 Query: 106 IHGAC-----------VSVGCYAMTDAQIDEIFAFVRDAFV 135 IHG + GC A+T+ QI+E+ V Sbjct: 145 IHGLGASDPDIHRRFHWTEGCVAVTNPQIEELTRLVSIGTR 185 >gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 313 Score = 68.2 bits (166), Expect = 1e-10 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 11/72 (15%) Query: 60 DFQSPEGFYSVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC------- 110 D +P G Y + L +YY LA + +PN YD++ TG + IHG Sbjct: 94 DLTTPIGSYDLNAR-LTGLDQYYGPLAFSTNYPNVYDQSLKKTGGGIWIHGLPLNGNRED 152 Query: 111 -VSVGCYAMTDA 121 + GC A+ + Sbjct: 153 INTRGCIAIDNE 164 >gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens] Length = 162 Score = 65.1 bits (158), Expect = 9e-10 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 25/131 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ-PNQL 75 I + ++R L + K ++K++ + G+G K++ GD ++P G Y + P + Sbjct: 31 INVLTKKRILNICKNG-----TVVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCYAMT-D 120 N ++ + I I +P A GYTG+ + IHG + GC A+ + Sbjct: 85 N---QFKVFIPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKN 141 Query: 121 AQIDEIFAFVR 131 I+ + +V+ Sbjct: 142 NYIEYVANWVK 152 >gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 162 Score = 64.7 bits (157), Expect = 1e-09 Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 25/131 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ-PNQL 75 I + ++R L + K ++K++ + G+G K++ GD ++P G Y + P + Sbjct: 31 INVLTKKRILNICKNG-----TVVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCYAMT-D 120 N ++ + I I +P A GY+G+ + IHG + GC A+ + Sbjct: 85 N---QFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKN 141 Query: 121 AQIDEIFAFVR 131 I+ + +V+ Sbjct: 142 NYIEYVANWVK 152 >gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 181 Score = 60.5 bits (146), Expect = 3e-08 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 47/153 (30%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDFQSPEGFYSVQP 72 V+I I E +L + + +++ ++ + G R GD Q+P G + + Sbjct: 23 DVWILIDTSEHRLSVMRKD-----KVLLTFDNVAIGRYGASRSRMRGDNQTPLGSFQIS- 76 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGK--------YLM------------------- 105 + R+Y I +PN + +M Sbjct: 77 -WVKQHDRFYRFYGINYPNREVADLALSEGRISRQVWENIMNAIESTGLSPQDTSLGGYI 135 Query: 106 -----------IHGA-CVSVGCYAMTDAQIDEI 126 +H + GC A+T+ QID++ Sbjct: 136 GIHGIGKGDQAVHSRFNWTNGCVALTNVQIDQL 168 >gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitrosomonas europaea ATCC 19718] Length = 182 Score = 59.0 bits (142), Expect = 7e-08 Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 45/166 (27%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 S ++I I E++L + M G+ + I G R +GD Q+P G + Sbjct: 19 SYANSDIWILIDTLEQRLSV----MRGDKAQLAFNNIAIGRYGASSSRMKGDNQTPLGSF 74 Query: 69 SVQPNQLNPDSRYYLAINIGFPN--AYDRAHGYT-------------------------- 100 + + RYY + FPN A D A Sbjct: 75 QIS--WIKQHHRYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPL 132 Query: 101 ----------GKYLMIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFV 135 +H + GC A+T+AQIDE+ ++++ Sbjct: 133 GGYIGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTK 178 >gi|28275296|ref|NP_783551.1| hypothetical protein SO4656.3 [Shewanella oneidensis MR-1] Length = 67 Score = 58.2 bits (140), Expect = 1e-07 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 21/60 (35%) Query: 100 TGKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 G +MIHG + GC A+T++++DEI+ V V + I Sbjct: 13 PGGLIMIHGQHNGLGWLSFASQFFNWTNGCIAVTNSEMDEIWQAVDVG-------VPIEI 65 >ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 Length = 160 Score = 57.8 bits (139), Expect = 1e-07 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 45/163 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S ++I I E++L + M G+ + I G R +GD Q+P G + + Sbjct: 1 NSDIWILIDTLEQRLSV----MRGDKAQLAFNNIAIGRYGASSSRMKGDNQTPLGSFQIS 56 Query: 72 PNQLNPDSRYYLAINIGFPN--AYDRAHGYT----------------------------- 100 + RYY + FPN A D A Sbjct: 57 --WIKQHHRYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPLGGY 114 Query: 101 -------GKYLMIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFV 135 +H + GC A+T+AQIDE+ ++++ Sbjct: 115 IGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTK 157 >gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 289 Score = 56.3 bits (135), Expect = 5e-07 Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 42/144 (29%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S V I + + L L++ + +L+KSYP+ P +P G +++ Sbjct: 179 PSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGK-PTTP--------TPRGTFTII 224 Query: 72 PNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDAQ 122 Q+NP + + + P+ +G IHG S GC M + Sbjct: 225 NKQVNPGGPFGTRWMGLSQPH-----YG-------IHGTNNPASIGTAASNGCIRMYNED 272 Query: 123 IDEIFAFVRDAFVGGQPSVQVSIY 146 ++E+F V V+IY Sbjct: 273 VNELFNLVSVG-------TPVTIY 289 >ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 Length = 135 Score = 55.1 bits (132), Expect = 9e-07 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 18/129 (13%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---- 71 + I K+E KL L K + I G K ++GD ++PEG + + Sbjct: 5 ILLISKDEMKLRLIDYKGQELFTA----DIACGKN-YGNKEKQGDLKTPEGTFKIIDIQD 59 Query: 72 -PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVGCYAMTDAQ 122 + I + N + R K + IH G + GC + +++ Sbjct: 60 ASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 119 Query: 123 IDEIFAFVR 131 ++++ + +R Sbjct: 120 LEQLVSLIR 128 >gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis NCTC 9343] Length = 183 Score = 55.1 bits (132), Expect = 9e-07 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 18/129 (13%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---- 71 + I K+E KL L K + I G K ++GD ++PEG + + Sbjct: 43 ILLISKDEMKLRLIDYKGQELFTA----DIACGKN-YGNKEKQGDLKTPEGTFKIIDIQD 97 Query: 72 -PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVGCYAMTDAQ 122 + I + N + R K + IH G + GC + +++ Sbjct: 98 ASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 157 Query: 123 IDEIFAFVR 131 ++++ + +R Sbjct: 158 LEQLVSLIR 166 >gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88] Length = 232 Score = 53.2 bits (127), Expect = 3e-06 Identities = 35/168 (20%), Positives = 59/168 (35%), Gaps = 52/168 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + G + I+ YPI P SP G + + N Sbjct: 42 ILVDISEFKMYLIEK---GSNKPIRRYPIA-GGKPETP--------SPYGTWKITSKSAN 89 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P G G IHG S GC M + ++E++ Sbjct: 90 WGSGFGTRWMGLNVP------WGQYG----IHGTNKPLSINNPDSKGCIRMFNKDVEELY 139 Query: 128 AFVRDAFVGGQPSVQVSIY--PFRMTDANMQRHRNSPNYDFWKQLKPG 173 +V + V IY P+ ++ ++ ++ LKPG Sbjct: 140 KYVDVGTI-------VVIYGGPYNLS------------WNNFRTLKPG 168 >ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 Length = 114 Score = 51.6 bits (123), Expect = 1e-05 Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 31/128 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + G + I+ YPI P SP G + + N Sbjct: 6 ILVDISEFKMYLIEK---GSNKPIRRYPIA-GGKPETP--------SPYGTWKITSKSAN 53 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P G G IHG S GC M + ++E++ Sbjct: 54 WGSGFGTRWMGLNVP------WGQYG----IHGTNKPLSINNPDSKGCIRMFNKDVEELY 103 Query: 128 AFVRDAFV 135 +V + Sbjct: 104 KYVDVGTI 111 >ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 Length = 110 Score = 48.6 bits (115), Expect = 1e-04 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 34/109 (31%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS---RYYLAINIGFPNAYD 94 +++K+YPI Q+P G + + Q NP Y+L++ Sbjct: 22 RVMKTYPIAVGKILT---------QTPTGEFYIINRQRNPGGPFGAYWLSL-------SK 65 Query: 95 RAHGYTGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFV 135 + +G IHG S GC M + + E+ + V + Sbjct: 66 QHYG-------IHGTNNPASIGKAVSKGCIRMHNKDVIELASIVPNGTR 107 >gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC 14580] Length = 165 Score = 48.6 bits (115), Expect = 1e-04 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 39/133 (29%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ L+K+YPI Q+P G + + Sbjct: 56 PYRIAVSLNGRTLRLYERDR-----LVKTYPIAVGKILT---------QTPRGEFVIVNR 101 Query: 74 QLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDAQ 122 Q NP Y+L++ + +G IHG S GC M + Sbjct: 102 QPNPGGPFGAYWLSL-------SKQHYG-------IHGTNNPSSIGKAVSRGCIRMHNRD 147 Query: 123 IDEIFAFVRDAFV 135 + E+ + V + Sbjct: 148 VLELASIVPNGTR 160 >gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermotoga maritima MSB8] Length = 395 Score = 48.2 bits (114), Expect = 1e-04 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 40/136 (29%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +PV I + KL L+ + L+K YP+ +P G Y V Sbjct: 262 NPVTIVVNLFSSKLALYY-----DGVLLKVYPVALGRSDA----------TPPGRYWVLR 306 Query: 73 NQLNPDSRY---YLA-------INIGFPNAYDRAHGYTGKYLMIHGA--CV------SVG 114 +++P + Y++ + + D + IHG S G Sbjct: 307 KEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRISHG 359 Query: 115 CYAMTDAQIDEIFAFV 130 C M + ++EI AF Sbjct: 360 CIRMFNRDVEEIDAFA 375 >ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 Length = 110 Score = 48.2 bits (114), Expect = 1e-04 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 39/133 (29%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ L+K+YPI Q+P G + + Sbjct: 3 PYRIAVSLNGRTLRLYERDR-----LVKTYPIAVGKILT---------QTPRGEFVIVNR 48 Query: 74 QLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDAQ 122 Q NP Y+L++ + ++ IHG S GC M + Sbjct: 49 QPNPGGPFGAYWLSL--------------SKQHYGIHGTNNPSSIGKAVSRGCIRMHNRD 94 Query: 123 IDEIFAFVRDAFV 135 + E+ + V + Sbjct: 95 VLELASIVPNGTR 107 >gi|50085556|ref|YP_047066.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 462 Score = 48.2 bits (114), Expect = 1e-04 Identities = 35/157 (22%), Positives = 51/157 (32%), Gaps = 50/157 (31%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 ++ LP I K R+L L+ ++ Q+I S+P S D SP Sbjct: 320 VRNDLPEDIHLIIAHKGARQLYLFNSRN----QMIASFPATIGSS---------DTPSPT 366 Query: 66 GFYSVQPNQLNPDSRYY------------LAINIGFPNAYDRAHGYTGKYLM-------- 105 G Y V NP Y L++ G PNA + Sbjct: 367 GTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSF 418 Query: 106 -IHGACV--------SVGCYAMTDAQIDEIFAFVRDA 133 IHG S GC +T+ +++ VR Sbjct: 419 GIHGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSG 455 >ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 Length = 123 Score = 47.8 bits (113), Expect = 2e-04 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 40/136 (29%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +PV I + KL L+ + L+K YP+ +P G Y V Sbjct: 2 NPVTIVVNLFSSKLALYY-----DGVLLKVYPVALGRSDA----------TPPGRYWVLR 46 Query: 73 NQLNPDSRY---YLA-------INIGFPNAYDRAHGYTGKYLMIHGA--CV------SVG 114 +++P + Y++ + + D + IHG S G Sbjct: 47 KEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRISHG 99 Query: 115 CYAMTDAQIDEIFAFV 130 C M + ++EI AF Sbjct: 100 CIRMFNRDVEEIDAFA 115 >gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A Resolution Length = 164 Score = 47.8 bits (113), Expect = 2e-04 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 34/109 (31%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS---RYYLAINIGFPNAYD 94 ++ K+YPI Q+P G + + Q NP Y+L++ Sbjct: 74 RVXKTYPIAVGKILT---------QTPTGEFYIINRQRNPGGPFGAYWLSL--------- 115 Query: 95 RAHGYTGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFV 135 + + G IHG S GC + + E+ + V + Sbjct: 116 -SAAHYG----IHGTNNPASIGKAVSKGCIRXHNKDVIELASIVPNGTR 159 >gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 182 Score = 46.6 bits (110), Expect = 3e-04 Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 29/131 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + IR+ + R++ +++ K Q++KS+PI G ++P G Y V + Sbjct: 56 ISIRVKRGARQVYVYQDK-----QVLKSFPIAIGKSGW---------ETPLGNYQVIYMK 101 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-------TGKYLMIHGAC--------VSVGCYAMT 119 NP + + NI P A + +L HG VS GC M Sbjct: 102 KNPIFKNFKTGNIIMPGANNPLGKRVIVFKIYKKSHLAFHGTNQDKLIGKAVSHGCIRML 161 Query: 120 DAQIDEIFAFV 130 + + ++ V Sbjct: 162 NKDVIALYELV 172 >gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1] Length = 167 Score = 45.9 bits (108), Expect = 6e-04 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 51/156 (32%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G +E ++P G++ + Sbjct: 9 ILVDLETQRLYL--------PKHQKCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGA 58 Query: 74 ---------QLNPDSRYYLA-INIGFPNAYDRAHGY------------TGK-------YL 104 P Y + + FP D G+ Y+ Sbjct: 59 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 117 Query: 105 MIHGACVSV--------GCYAMTDAQIDEIFAFVRD 132 IHG + GC M + + E+F V + Sbjct: 118 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPE 153 >gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 332 Score = 45.9 bits (108), Expect = 6e-04 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 33/130 (25%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I I RKL L + +L+K YP+ +P G + V Sbjct: 143 LLIEIDVASRKLVL-----TEDGKLVKEYPVAVGKSKT---------PTPLGEWKVVHKG 188 Query: 75 LNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 LN + + + + P G G IHG S GC M + ++E Sbjct: 189 LNWGNGFGTRWMGLNVP------WGIYG----IHGTNKPGSIGSYASHGCIRMFNRHVEE 238 Query: 126 IFAFVRDAFV 135 ++ V Sbjct: 239 LYPLVPAGTR 248 >ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 Length = 156 Score = 45.5 bits (107), Expect = 7e-04 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 51/156 (32%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G +E ++P G++ + Sbjct: 6 ILVDLETQRLYL--------PKHQKCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGA 55 Query: 74 ---------QLNPDSRYYLA-INIGFPNAYDRAHGY------------TGK-------YL 104 P Y + + FP D G+ Y+ Sbjct: 56 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 114 Query: 105 MIHGACVSV--------GCYAMTDAQIDEIFAFVRD 132 IHG + GC M + + E+F V + Sbjct: 115 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPE 150 >gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 415 Score = 45.1 bits (106), Expect = 0.001 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 50/157 (31%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 ++ LP I K ++L L+ ++ Q+I S+P S D SP Sbjct: 273 VRNDLPEDIHLIIAHKGAKQLYLFNSRN----QMIASFPATIGST---------DTPSPT 319 Query: 66 GFYSVQPNQLNPDSRYY------------LAINIGFPNAYDRAHGYTGKYLM-------- 105 G Y V NP Y L++ G PNA + Sbjct: 320 GTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSF 371 Query: 106 -IHGACV--------SVGCYAMTDAQIDEIFAFVRDA 133 IHG S GC +T+ +++ VR Sbjct: 372 GIHGTPNPSLISKTASHGCIRLTNWDANDLGNKVRSG 408 >gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501] Length = 191 Score = 44.7 bits (105), Expect = 0.001 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 36/150 (24%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + E Q L V +ER++ ++ + Q+I +Y + G Sbjct: 55 PTAPENNQTLATHVVLNL---KERRVYVY-----QDDQVIANYRVAIGRPGW-------- 98 Query: 61 FQSPEGFYSV-----QPNQLNPDSRYYLAIN---------IGFPNAYDRA---HGYTGKY 103 ++P+G +SV P NP + A IGF + HG G++ Sbjct: 99 -ETPKGNFSVIQMVEDPQWKNPWNGRVSAPGPNSPLGERWIGFSREGGKYIGFHGTPGEH 157 Query: 104 LMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 +M G VS GC M + + E++ V++ Sbjct: 158 VM--GQAVSHGCVRMRNRDVKELYELVQNG 185 >gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromobacterium violaceum ATCC 12472] Length = 208 Score = 43.9 bits (103), Expect = 0.002 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 64/160 (40%) Query: 28 LWKAKMGGEYQLI-------KSYPICKWSGGLGPKRREGDFQSPEGFY------------ 68 +W +L+ K + + G+G G +Q+P G++ Sbjct: 50 VWVGVKSQTLRLLDDWGRIQKEFTVSTAKNGVG--ETSGSYQTPRGWHAVCEKLGAGAEA 107 Query: 69 --SVQPNQLNPDSRYYLAINIGFPN-------------------------AYDRAHGYTG 101 + Q+ P +Y +++ +PN +YDRA Sbjct: 108 NTIIFRRQVTPW-KYTPELHVQYPNKDWILTRILWLCGQEPGLNQGGNVDSYDRA----- 161 Query: 102 KYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDA 133 + IHGA S+GC M + + E+F V + Sbjct: 162 --IYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNG 199 >ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 Length = 160 Score = 43.9 bits (103), Expect = 0.002 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 64/160 (40%) Query: 28 LWKAKMGGEYQLI-------KSYPICKWSGGLGPKRREGDFQSPEGFY------------ 68 +W +L+ K + + G+G G +Q+P G++ Sbjct: 6 VWVGVKSQTLRLLDDWGRIQKEFTVSTAKNGVG--ETSGSYQTPRGWHAVCEKLGAGAEA 63 Query: 69 --SVQPNQLNPDSRYYLAINIGFPN-------------------------AYDRAHGYTG 101 + Q+ P +Y +++ +PN +YDRA Sbjct: 64 NTIIFRRQVTPW-KYTPELHVQYPNKDWILTRILWLCGQEPGLNQGGNVDSYDRA----- 117 Query: 102 KYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDA 133 + IHGA S+GC M + + E+F V + Sbjct: 118 --IYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNG 155 >gi|71367451|ref|ZP_00657976.1| similar to Uncharacterized protein conserved in bacteria [Nocardioides sp. JS614] Length = 243 Score = 43.6 bits (102), Expect = 0.003 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 16/89 (17%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV--------------QPNQ 74 W+ G + + + G G K+REGD +SP G Y + + Sbjct: 79 WERDGDGHWSKAREFRSTIGLRGWG-KQREGDNRSPVGVYRIKVTFTTGSENPGEMPWRR 137 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKY 103 P S + + N + A G T Sbjct: 138 RRPTSVVSSSAGPNY-NTWLEARGVTSGD 165 >gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426] Length = 165 Score = 43.2 bits (101), Expect = 0.004 Identities = 29/135 (21%), Positives = 45/135 (33%), Gaps = 36/135 (26%) Query: 10 LPGS---PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 LP P I I R+L L I++YPI +P G Sbjct: 49 LPPKGSIPYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVG 94 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAM 118 + + Q NP + A+ + + + G IHG VS GC M Sbjct: 95 DFVIVNRQPNPGGPF-GAMWLS------LSKVHYG----IHGTNDPSSIGKYVSKGCIRM 143 Query: 119 TDAQIDEIFAFVRDA 133 + + E+ + V + Sbjct: 144 HNKDVLELASIVPNG 158 >ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 Length = 110 Score = 42.4 bits (99), Expect = 0.007 Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 33/128 (25%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I R+L L I++YPI +P G + + Sbjct: 3 PYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVGDFVIVNR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + A+ + + + G IHG VS GC M + + E Sbjct: 49 QPNPGGPF-GAMWLS------LSKVHYG----IHGTNDPSSIGKYVSKGCIRMHNKDVLE 97 Query: 126 IFAFVRDA 133 + + V + Sbjct: 98 LASIVPNG 105 >gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 172 Score = 42.0 bits (98), Expect = 0.009 Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 43/153 (28%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREG 59 E+ + +P I + +ER+L L + I+ YP+ G G EG Sbjct: 27 PDEVSYRSDYAPGTILVKTKERRLYLIVDSD----RAIR-YPVGVGKAGKQWAGTAHIEG 81 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT--------------GKYLM 105 ++ P P ++ D+ P D G + G Sbjct: 82 KYRDPA---WAPPAEVKRDN----------PRIPDVIAGGSPSNPMGVAAMTLSGGGQYA 128 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFV 130 IHG VS GC M + ID+++ V Sbjct: 129 IHGTNRPQTVGHFVSYGCIRMYNNDIDDLYRRV 161 >ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 Length = 135 Score = 40.9 bits (95), Expect = 0.018 Identities = 32/147 (21%), Positives = 47/147 (31%), Gaps = 50/147 (34%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I K ++L L+ ++ Q+I S+P S D SP G Y V Sbjct: 5 LIIAHKGAKQLYLFNSRN----QMIASFPATIGST---------DTPSPTGTYKVVGVAR 51 Query: 76 NPDSRYY------------LAINIGFPNAYDRAHGYTGKYLM---------IHGACV--- 111 NP Y L++ G PNA + IHG Sbjct: 52 NPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSL 103 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ +++ VR Sbjct: 104 ISKTASHGCIRLTNWDANDLGNKVRSG 130 >gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Bacillus subtilis subsp. subtilis str. 168] Length = 176 Score = 40.9 bits (95), Expect = 0.018 Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 37/144 (25%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 LPG P Y+ + K +L + ++ Y + D +PEG +S Sbjct: 23 LPGDP-YVIVNKRTNELAVILDN-----KVEGVYSVATGKT---------DDLTPEGEFS 67 Query: 70 VQPNQLNPDSRYYLAINI--GFPNA--------YDRAHGYTGKYLMIHGAC--------V 111 V NP YY NI G P+ +D A G G+ IHG V Sbjct: 68 VTVKAENP---YYRKKNIEGGSPDNPLGARWIGFD-AKGTDGRIYGIHGTNREESVGKFV 123 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFV 135 S GC M + ++ +F + Sbjct: 124 SNGCIRMHNDEVVHLFQTIPVGTR 147 >gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 230 Score = 40.9 bits (95), Expect = 0.020 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 35/133 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 PV + + ER L +++ + ++ ++Y I P P G ++V Sbjct: 120 PPPVTVNVNVAERTLTVYR-----DGRIYRTYRIAL-ENPASP--------IPRGTFTVL 165 Query: 72 PNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 Q++P I + G + HG + M++ Sbjct: 166 NKQVDPGVEMGARWIGLS----------EAGFGI--HGTNTPEFIDVVSTGNSIVMSNED 213 Query: 123 IDEIFAFVRDAFV 135 + E+F V + Sbjct: 214 VSELFNLVPVGTI 226 >ErfK_YbiS_YhnG_Q5ZV58_5-145_PF03734.4 Length = 141 Score = 40.9 bits (95), Expect = 0.021 Identities = 27/130 (20%), Positives = 39/130 (30%), Gaps = 43/130 (33%) Query: 39 LIKSYPICKWSGGLGPKRREGDFQSPEG---FYSVQPNQLNPDS----------RYYLAI 85 LI +Y I G+G K G +P G YS+ L +S Y ++ Sbjct: 5 LIANYAISSGKNGVGEKINSG--CTPRGWHKIYSILGIDLPINSVMVAREWTGEIYSESL 62 Query: 86 NIGFPNAYDRAHGY------------TGKY-------LMIHGACVSV--------GCYAM 118 FP D G + IHG + GC + Sbjct: 63 ATQFP-ERDWILTRVLQLDGLEPGRNKGGDVDTLHRYIYIHGTPDTTQLGIPGSHGCIRL 121 Query: 119 TDAQIDEIFA 128 + I E+ A Sbjct: 122 NNDAIIELAA 131 >gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 283 Score = 40.5 bits (94), Expect = 0.028 Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 36/133 (27%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 K Q + I + K R+L G ++ K+YP+ P + Sbjct: 83 KREGQAWEQPRISIDVVK--RRL----TYTSGSFK--KTYPVAVGK-PQTP--------T 125 Query: 64 PEGFYSVQPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 P G +++ +NP + + + P IHG VS G Sbjct: 126 PLGNWTIVQKTVNPGGPFGARWMRLSVP----------WGGYGIHGTNRPSSIGKAVSHG 175 Query: 115 CYAMTDAQIDEIF 127 C M +A + E++ Sbjct: 176 CVRMYNADVIELY 188 >gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesorhizobium loti MAFF303099] Length = 426 Score = 40.1 bits (93), Expect = 0.030 Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 29/145 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK--RREGDFQS-PEGFY 68 P I I R+L L + + + Y I GL K GD Q P Sbjct: 286 YEPGTIVIDTSARRLYLVE-----SFSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIP 340 Query: 69 SVQPNQLNPD--SRYYLAINIGFPNA--------YDRAHGYTGKYLMIH--------GAC 110 ++ + P +Y + G N YD G +L IH G Sbjct: 341 TLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYD---GKKDTHLRIHGTIAPQSIGTS 397 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFV 135 S GC+ M + + ++++ VR Sbjct: 398 ASNGCFRMINEHVMDLYSRVRVGTK 422 >ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 Length = 127 Score = 40.1 bits (93), Expect = 0.033 Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 37/143 (25%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG P Y+ + K +L + ++ Y + D +PEG +SV Sbjct: 1 PGDP-YVIVNKRTNELAVILDN-----KVEGVYSVATGKT---------DDLTPEGEFSV 45 Query: 71 QPNQLNPDSRYYLAINI--GFPNA--------YDRAHGYTGKYLMIHGAC--------VS 112 NP YY NI G P+ +D A G G+ IHG VS Sbjct: 46 TVKAENP---YYRKKNIEGGSPDNPLGARWIGFD-AKGTDGRIYGIHGTNREESVGKFVS 101 Query: 113 VGCYAMTDAQIDEIFAFVRDAFV 135 GC M + ++ +F + Sbjct: 102 NGCIRMHNDEVVHLFQTIPVGTR 124 >gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 300 Score = 39.7 bits (92), Expect = 0.043 Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 34/128 (26%) Query: 25 KLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYY-- 82 +L L+ GG +++ S+P+ S EG ++P G Y V + NP ++ Sbjct: 111 ELRLYFVPEGGTPRIV-SFPVGTGS--------EG-KETPLGVYRVTEKRANP--AWHVP 158 Query: 83 LAINIGFP-----------NAYDRAHGY-TGKYLMIHGA--------CVSVGCYAMTDAQ 122 L+I P N T LMIHG VS GC + Sbjct: 159 LSIRQERPRLPAVVPPGPDNPLGSHALRLTDDGLMIHGTNRPWGVGRNVSHGCIRLYPED 218 Query: 123 IDEIFAFV 130 I +F V Sbjct: 219 IPVLFRLV 226 >gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666] Length = 176 Score = 38.6 bits (89), Expect = 0.099 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 13/53 (24%) Query: 103 YLMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 Y+ IHG +S+GC M +A I E+F V V + P Sbjct: 116 YIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGT-----EVWIQAGP 163 >ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 Length = 140 Score = 38.6 bits (89), Expect = 0.11 Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 29/145 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK--RREGDFQS-PEGFY 68 P I I R+L L ++ + + Y I GL K GD Q P Sbjct: 1 YEPGTIVIDTSARRLYLVES-----FSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIP 55 Query: 69 SVQPNQLNPD--SRYYLAINIGFPNA--------YDRAHGYTGKYLMIH--------GAC 110 ++ + P +Y + G N YD G +L IH G Sbjct: 56 TLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYD---GKKDTHLRIHGTIAPQSIGTS 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFV 135 S GC+ M + + ++++ VR Sbjct: 113 ASNGCFRMINEHVMDLYSRVRVGTK 137 >gi|18144285|dbj|BAB80332.1| hypothetical protein [Clostridium perfringens str. 13] Length = 454 Score = 38.2 bits (88), Expect = 0.12 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 46/147 (31%) Query: 26 LELWKAKMGGEYQLIKSYPICKWSGGLG--PKRREGDFQSPEGFYSVQ------------ 71 +E+++ GE+ I S + GL R + +P G S+ Sbjct: 283 IEIYEKNDSGEWNNIDSTTGRVGANGLAYIENRVQSTNTTPAGVMSITGAFGVKNNPGTK 342 Query: 72 -----------PNQLNPDSRYYLAIN----------IGFPNAYDRAH---------GYTG 101 + + +S Y IN I +P Y+ + G Sbjct: 343 LDYIKVNNNMYWDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKG 402 Query: 102 KYLMIH--GACVSVGCYAMTDAQIDEI 126 + +H G + GC +M ++ EI Sbjct: 403 GAIFVHCLGRGATGGCVSMPREKMIEI 429 >gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 160 Score = 38.2 bits (88), Expect = 0.13 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 8/37 (21%) Query: 103 YLMIHGACV--------SVGCYAMTDAQIDEIFAFVR 131 Y+ IHG S GC M +A + E+F V Sbjct: 114 YIYIHGTPECEPMGEAHSHGCIRMRNADVRELFDLVP 150 >gi|62896365|emb|CAH94386.1| putative thiamine biosynthesis lipoprotein precursor ApbE [Streptomyces griseus subsp. griseus] Length = 235 Score = 37.4 bits (86), Expect = 0.21 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 80 RYYLAINIGFPNAYDR-AHGYTGKYLMIH--GACVSVGCYAMTDAQIDEIFA 128 +Y A+ +GF YDR G G + +H G + GC ++ + EI A Sbjct: 163 QYARALVVGF--NYDRPVRGR-GAGIFLHVNGRGATAGCVSVPADAMAEILA 211 >gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 160 Score = 37.0 bits (85), Expect = 0.27 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 8/37 (21%) Query: 103 YLMIHGACVSV--------GCYAMTDAQIDEIFAFVR 131 Y+ IHG S GC M +A I E+F V Sbjct: 114 YIYIHGCPDSSEIGSPGSHGCIRMRNADIVELFDLVP 150 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Brady... 303 1e-81 gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [M... 301 6e-81 gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodo... 297 1e-79 gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor... 297 1e-79 gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitr... 295 4e-79 DUF949_Q89XW3_52-252_PF06104.2 293 1e-78 gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizob... 292 3e-78 gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmone... 290 1e-77 DUF949_Q92JZ0_45-245_PF06104.2 290 1e-77 gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF94... 290 1e-77 DUF949_Q83M88_30-229_PF06104.2 290 2e-77 gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melite... 287 1e-76 gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesor... 287 2e-76 gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefacien... 285 3e-76 gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [M... 285 5e-76 DUF949_Q98FX6_1-193_PF06104.2 282 3e-75 gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia p... 281 6e-75 DUF949_Q8YJP4_41-241_PF06104.2 281 7e-75 gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella qui... 279 2e-74 DUF949_Q7CS68_57-257_PF06104.2 278 4e-74 gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefacien... 278 6e-74 gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Barto... 278 7e-74 gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia c... 277 9e-74 DUF949_Q66E07_28-227_PF06104.2 277 1e-73 DUF949_Q7CSY6_66-266_PF06104.2 275 5e-73 gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salm... 274 1e-72 DUF949_Q6D1H5_32-231_PF06104.2 272 3e-72 DUF949_Q57JI8_39-239_PF06104.2 271 6e-72 DUF949_Q6G1P2_42-242_PF06104.2 270 1e-71 DUF949_Q6G1H8_42-242_PF06104.2 270 2e-71 gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein ... 268 4e-71 gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photo... 264 9e-70 DUF949_Q7N7F5_31-231_PF06104.2 261 9e-69 gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein ... 243 2e-63 gi|54297427|ref|YP_123796.1| Legionella secretion system protein... 181 7e-45 gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] 165 7e-40 gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudo... 164 1e-39 gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesor... 162 5e-39 ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 161 1e-38 gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 159 3e-38 gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protei... 158 6e-38 gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella b... 158 7e-38 gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseu... 157 1e-37 ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 157 1e-37 gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 157 1e-37 gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella f... 156 2e-37 gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 156 2e-37 DUF949_Q60B45_95-280_PF06104.2 156 3e-37 gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methy... 156 4e-37 gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia s... 156 4e-37 gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewan... 156 4e-37 gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 156 4e-37 gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 155 5e-37 gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella bur... 155 6e-37 gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pse... 154 9e-37 gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 154 1e-36 gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein ... 153 2e-36 gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella a... 153 3e-36 ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 152 3e-36 gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 152 4e-36 ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 152 4e-36 DUF949_Q6LJZ6_66-236_PF06104.2 151 1e-35 gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Ery... 150 2e-35 gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein ... 150 2e-35 gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein ... 150 2e-35 gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella d... 149 3e-35 gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [S... 149 5e-35 gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Pho... 149 6e-35 ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 148 6e-35 gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein ... 148 8e-35 gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein ... 147 1e-34 gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 147 1e-34 ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 147 2e-34 gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdello... 147 2e-34 gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 147 2e-34 gi|37675934|ref|NP_936330.1| uncharacterized protein conserved i... 146 3e-34 gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibri... 146 3e-34 ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 144 1e-33 gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibri... 144 1e-33 gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdello... 144 2e-33 gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 144 2e-33 gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 142 5e-33 gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulf... 142 6e-33 ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 142 6e-33 ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 141 8e-33 gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 141 1e-32 gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 139 3e-32 ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 139 5e-32 ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 136 3e-31 DUF949_Q83XL8_75-191_PF06104.2 134 1e-30 gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdello... 132 6e-30 gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 131 1e-29 gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein ... 130 2e-29 gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein ... 127 1e-28 gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 126 4e-28 gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 124 1e-27 gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted p... 119 3e-26 gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovi... 119 4e-26 gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 116 3e-25 gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax f... 116 3e-25 gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylo... 115 5e-25 ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 115 6e-25 gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted p... 113 3e-24 gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 113 3e-24 gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted p... 110 2e-23 gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methy... 110 2e-23 DUF949_Q83CG1_72-171_PF06104.2 109 3e-23 ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 106 3e-22 gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 104 1e-21 gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitros... 104 1e-21 gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protei... 104 2e-21 ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 102 6e-21 gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protei... 102 8e-21 gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 100 1e-20 gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan bi... 98 2e-19 gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Woli... 97 2e-19 gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protei... 97 3e-19 gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family ... 96 3e-19 ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 96 4e-19 gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [T... 94 2e-18 gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/Y... 94 2e-18 gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquife... 92 7e-18 gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein ... 92 7e-18 gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [B... 91 2e-17 gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein ... 91 2e-17 ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 90 3e-17 gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:Er... 90 3e-17 gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera... 90 3e-17 ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 90 3e-17 ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 86 6e-16 gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_20... 86 7e-16 gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Aci... 85 1e-15 ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 84 2e-15 gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legio... 84 2e-15 ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 84 3e-15 gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legio... 83 3e-15 gi|50085556|ref|YP_047066.1| conserved hypothetical protein; put... 81 1e-14 gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subt... 80 3e-14 gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobac... 80 3e-14 gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acin... 79 7e-14 gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermo... 78 1e-13 gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromo... 76 4e-13 ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 76 6e-13 ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 74 3e-12 gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helic... 73 3e-12 gi|28275296|ref|NP_783551.1| hypothetical protein SO4656.3 [Shew... 58 1e-07 gi|71367451|ref|ZP_00657976.1| similar to Uncharacterized protei... 58 2e-07 Sequences not found previously or not previously below threshold: ErfK_YbiS_YhnG_Q5WC42_54-163_PF03734.4 80 3e-14 gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacil... 79 4e-14 ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 79 7e-14 gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thio... 73 5e-12 gi|71674300|ref|ZP_00672047.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 72 5e-12 gi|23129994|ref|ZP_00111815.1| COG1376: Uncharacterized protein ... 72 1e-11 gi|67916612|ref|ZP_00510315.1| ErfK/YbiS/YcfS/YnhG [Clostridium ... 72 1e-11 gi|71674299|ref|ZP_00672046.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 71 1e-11 gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:Er... 71 2e-11 gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synec... 70 4e-11 ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 69 5e-11 ErfK_YbiS_YhnG_Q97GF1_43-153_PF03734.4 69 6e-11 gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Azoar... 68 1e-10 gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Cl... 68 1e-10 ErfK_YbiS_YhnG_Q55604_71-200_PF03734.4 68 1e-10 ErfK_YbiS_YhnG_Q5P0G8_3-160_PF03734.4 68 1e-10 ErfK_YbiS_YhnG_Q895S8_170-298_PF03734.4 67 2e-10 gi|68270035|ref|ZP_00576285.1| Peptidoglycan-binding domain 1:Er... 67 3e-10 gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120] 67 3e-10 gi|15025432|gb|AAK80371.1| Uncharacterized protein, ErfK family;... 67 3e-10 gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Syn... 66 4e-10 gi|67928661|ref|ZP_00521848.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 66 4e-10 gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legio... 66 7e-10 ErfK_YbiS_YhnG_Q8YS14_144-270_PF03734.4 66 7e-10 gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psych... 66 8e-10 gi|71363427|ref|ZP_00654071.1| ErfK/YbiS/YcfS/YnhG [Psychrobacte... 65 1e-09 gi|71548935|ref|ZP_00669159.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 64 2e-09 gi|68205981|ref|ZP_00558177.1| ErfK/YbiS/YcfS/YnhG [Desulfitobac... 63 4e-09 ErfK_YbiS_YhnG_Q5N3Q0_79-206_PF03734.4 63 4e-09 gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 62 6e-09 gi|68234377|ref|ZP_00573460.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 62 6e-09 ErfK_YbiS_YhnG_Q5ZV58_5-145_PF03734.4 62 8e-09 gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Baci... 62 9e-09 gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobac... 62 9e-09 gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/Y... 62 1e-08 ErfK_YbiS_YhnG_Q606Y7_79-237_PF03734.4 61 1e-08 gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 61 1e-08 gi|66857904|ref|ZP_00401942.1| Peptidoglycan-binding LysM:ErfK/Y... 61 1e-08 gi|68174074|ref|ZP_00547345.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 61 2e-08 gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 61 2e-08 ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 60 3e-08 gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. ... 60 4e-08 gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesor... 59 5e-08 gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methy... 59 5e-08 gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmo... 59 7e-08 gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Baci... 59 7e-08 gi|67675669|ref|ZP_00472424.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 59 8e-08 ErfK_YbiS_YhnG_Q5KXE9_24-150_PF03734.4 59 1e-07 gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 58 1e-07 gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Proc... 58 1e-07 gi|26247257|ref|NP_753297.1| Hypothetical protein ycfS precursor... 58 1e-07 gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legio... 57 2e-07 gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Baci... 57 2e-07 ErfK_YbiS_YhnG_Q73D94_22-142_PF03734.4 57 3e-07 gi|67676061|ref|ZP_00472813.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 57 3e-07 gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Ba... 57 3e-07 gi|29654387|ref|NP_820079.1| hypothetical protein CBU1080 [Coxie... 57 3e-07 gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Brady... 57 4e-07 ErfK_YbiS_YhnG_Q83CN1_2-158_PF03734.4 57 4e-07 gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesor... 57 4e-07 ErfK_YbiS_YhnG_Q8FYK9_271-406_PF03734.4 56 4e-07 ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 56 4e-07 gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [B... 56 5e-07 gi|23127349|ref|ZP_00109222.1| COG1376: Uncharacterized protein ... 56 5e-07 gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbi... 56 8e-07 ErfK_YbiS_YhnG_Q5ZV45_94-231_PF03734.4 56 8e-07 gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein ... 55 9e-07 gi|17936017|ref|NP_532807.1| hypothetical protein Atu2133 [Agrob... 55 9e-07 gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 55 9e-07 gi|71548630|ref|ZP_00668854.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 55 1e-06 ErfK_YbiS_YhnG_Q818U5_25-151_PF03734.4 55 1e-06 gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitros... 55 1e-06 ErfK_YbiS_YhnG_Q98G98_358-493_PF03734.4 54 2e-06 ErfK_YbiS_YhnG_Q7V696_87-217_PF03734.4 54 2e-06 gi|71837791|ref|ZP_00677554.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 54 2e-06 ErfK_YbiS_YhnG_Q8UDJ2_335-470_PF03734.4 54 2e-06 gi|67934041|ref|ZP_00527134.1| Peptidoglycan-binding domain 1:Er... 54 2e-06 ErfK_YbiS_YhnG_Q8Z7I2_99-240_PF03734.4 54 3e-06 gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein ... 54 3e-06 gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clos... 53 4e-06 gi|68189539|gb|EAN04205.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 53 4e-06 ErfK_YbiS_YhnG_Q89WV4_37-169_PF03734.4 53 4e-06 gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Brady... 53 4e-06 gi|37676018|ref|NP_936414.1| uncharacterized protein conserved i... 53 4e-06 gi|68189671|gb|EAN04335.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 53 5e-06 gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein ... 53 5e-06 gi|68174957|ref|ZP_00548215.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 53 5e-06 gi|71364962|ref|ZP_00655525.1| Peptidoglycan-binding domain 1:Er... 53 5e-06 ErfK_YbiS_YhnG_Q92K34_317-452_PF03734.4 52 6e-06 gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Brady... 52 6e-06 gi|15075231|emb|CAC46787.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 52 6e-06 gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein ... 52 7e-06 gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Ba... 52 7e-06 ErfK_YbiS_YhnG_Q67P27_207-347_PF03734.4 52 7e-06 ErfK_YbiS_YhnG_Q89M18_213-348_PF03734.4 52 7e-06 gi|46400440|emb|CAF23889.1| hypothetical protein [Parachlamydia ... 52 7e-06 gi|69937030|ref|ZP_00631751.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 52 8e-06 gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanth... 52 8e-06 ErfK_YbiS_YhnG_Q89E55_71-202_PF03734.4 52 9e-06 gi|69926066|ref|ZP_00623537.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 52 9e-06 gi|71836515|ref|ZP_00676284.1| Peptidoglycan-binding LysM:ErfK/Y... 52 9e-06 gi|58580802|ref|YP_199818.1| hypothetical protein XOO1179 [Xanth... 52 9e-06 ErfK_YbiS_YhnG_Q8FX96_108-243_PF03734.4 52 1e-05 gi|69950815|ref|ZP_00638633.1| Peptidoglycan-binding LysM:ErfK/Y... 52 1e-05 gi|75675776|ref|YP_318197.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 52 1e-05 gi|17989404|ref|NP_542037.1| PROTEIN YBIS PRECURSOR [Brucella me... 52 1e-05 gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yers... 52 1e-05 ErfK_YbiS_YhnG_Q82U48_98-240_PF03734.4 51 1e-05 gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] 51 1e-05 ErfK_YbiS_YhnG_Q98PA3_31-163_PF03734.4 51 2e-05 ErfK_YbiS_YhnG_Q8XPD9_262-385_PF03734.4 51 2e-05 gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 51 2e-05 gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Ba... 51 2e-05 gi|75855745|ref|ZP_00763388.1| COG1376: Uncharacterized protein ... 51 2e-05 gi|69930773|ref|ZP_00627470.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 51 2e-05 gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Brady... 51 2e-05 gi|39936101|ref|NP_948377.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 51 2e-05 ErfK_YbiS_YhnG_Q6MC10_156-311_PF03734.4 51 2e-05 gi|69945495|ref|ZP_00636533.1| Peptidoglycan-binding LysM:ErfK/Y... 51 2e-05 gi|71282503|ref|YP_270846.1| LysM domain /ErfK/YbiS/YcfS/YnhG do... 51 2e-05 gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Cand... 50 3e-05 ErfK_YbiS_YhnG_Q9KCV4_26-152_PF03734.4 50 3e-05 ErfK_YbiS_YhnG_Q8P5X3_187-321_PF03734.4 50 4e-05 gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Brady... 50 4e-05 gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 50 4e-05 gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Proc... 50 4e-05 gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibri... 50 4e-05 gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 50 4e-05 gi|68515740|gb|EAN39455.1| Peptidoglycan-binding LysM:ErfK/YbiS/... 50 4e-05 gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct] 50 5e-05 gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanth... 49 5e-05 ErfK_YbiS_YhnG_Q60AJ8_93-237_PF03734.4 49 5e-05 gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Baci... 49 5e-05 gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein ... 49 6e-05 gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein ... 49 6e-05 gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Brady... 49 6e-05 ErfK_YbiS_YhnG_Q7MFG2_93-232_PF03734.4 49 6e-05 ErfK_YbiS_YhnG_Q6ND97_41-173_PF03734.4 49 6e-05 gi|68232378|ref|ZP_00571527.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 49 7e-05 gi|7380643|emb|CAB85233.1| hypothetical protein [Neisseria menin... 49 7e-05 gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmo... 49 7e-05 ErfK_YbiS_YhnG_Q7V8E9_47-190_PF03734.4 49 7e-05 gi|17133905|dbj|BAB76467.1| all4768 [Nostoc sp. PCC 7120] 49 8e-05 gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesor... 49 8e-05 ErfK_YbiS_YhnG_Q89CV1_74-185_PF03734.4 49 8e-05 gi|15156344|gb|AAK87086.1| AGR_C_2380p [Agrobacterium tumefacien... 49 8e-05 gi|48848818|ref|ZP_00303063.1| COG1376: Uncharacterized protein ... 49 9e-05 ErfK_YbiS_YhnG_Q8PH92_78-212_PF03734.4 49 9e-05 gi|61101279|ref|ZP_00376735.1| hypothetical protein ELI1976 [Ery... 49 9e-05 ErfK_YbiS_YhnG_Q81XG3_27-152_PF03734.4 49 1e-04 gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesor... 48 1e-04 ErfK_YbiS_YhnG_Q6N5E1_100-211_PF03734.4 48 1e-04 gi|75186790|ref|ZP_00700057.1| COG1376: Uncharacterized protein ... 48 1e-04 gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesor... 48 1e-04 gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 48 1e-04 gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] 48 1e-04 ErfK_YbiS_YhnG_Q89BG8_76-215_PF03734.4 48 1e-04 gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Bruce... 48 2e-04 gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinor... 48 2e-04 gi|67153406|ref|ZP_00415151.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 48 2e-04 gi|75818411|ref|ZP_00748578.1| COG1376: Uncharacterized protein ... 47 2e-04 ErfK_YbiS_YhnG_Q8D0M4_96-235_PF03734.4 47 2e-04 ErfK_YbiS_YhnG_Q9JT27_44-178_PF03734.4 47 2e-04 gi|69926259|ref|ZP_00623730.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 47 2e-04 gi|67154504|ref|ZP_00416249.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 47 2e-04 gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigel... 47 3e-04 ErfK_YbiS_YhnG_Q883T0_95-232_PF03734.4 47 3e-04 gi|24375244|ref|NP_719287.1| LysM domain protein [Shewanella one... 47 3e-04 ErfK_YbiS_YhnG_Q8YN05_54-169_PF03734.4 47 3e-04 gi|48730422|ref|ZP_00264169.1| COG1376: Uncharacterized protein ... 47 3e-04 ErfK_YbiS_YhnG_Q9I5J7_55-167_PF03734.4 47 3e-04 gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii] 47 3e-04 ErfK_YbiS_YhnG_Q87G47_99-238_PF03734.4 47 4e-04 gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmo... 47 4e-04 ErfK_YbiS_YhnG_Q8UFV4_31-142_PF03734.4 47 4e-04 gi|61101139|ref|ZP_00376596.1| hypothetical protein ELI1837 [Ery... 46 4e-04 gi|52857863|ref|ZP_00341701.1| COG1686: D-alanyl-D-alanine carbo... 46 4e-04 gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacil... 46 5e-04 ErfK_YbiS_YhnG_Q92US7_190-325_PF03734.4 46 5e-04 gi|68004185|ref|ZP_00536684.1| Peptidoglycan-binding LysM:ErfK/Y... 46 5e-04 gi|15074019|emb|CAC45666.1| CONSERVED HYPOTHETICAL PROTEIN [Sino... 46 5e-04 gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacteriu... 46 5e-04 gi|68543641|ref|ZP_00583338.1| Peptidoglycan-binding LysM:ErfK/Y... 46 5e-04 ErfK_YbiS_YhnG_Q8CVY2_94-231_PF03734.4 46 5e-04 ErfK_YbiS_YhnG_Q98P76_240-375_PF03734.4 46 6e-04 gi|62423671|ref|ZP_00378830.1| COG3786: Uncharacterized protein ... 46 8e-04 ErfK_YbiS_YhnG_Q92R37_35-174_PF03734.4 46 9e-04 gi|22959005|ref|ZP_00006665.1| COG1376: Uncharacterized protein ... 46 9e-04 ErfK_YbiS_YhnG_Q57D03_90-229_PF03734.4 45 0.001 gi|71364613|ref|ZP_00655198.1| ErfK/YbiS/YcfS/YnhG [Psychrobacte... 45 0.001 gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia end... 45 0.001 gi|34497388|ref|NP_901603.1| hypothetical protein CV1933 [Chromo... 45 0.001 ErfK_YbiS_YhnG_Q6N9D2_60-191_PF03734.4 45 0.001 gi|15073711|emb|CAC45353.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 45 0.001 ErfK_YbiS_YhnG_Q9HZZ0_93-230_PF03734.4 45 0.001 gi|49610290|emb|CAG73734.1| putative exported protein [Erwinia c... 45 0.001 gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Brady... 45 0.001 gi|15074524|emb|CAC46170.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [... 45 0.001 ErfK_YbiS_YhnG_Q987T4_107-242_PF03734.4 45 0.001 ErfK_YbiS_YhnG_Q8Z5P0_93-230_PF03734.4 44 0.002 ErfK_YbiS_YhnG_Q7NWP8_32-170_PF03734.4 44 0.002 gi|15074222|emb|CAC45869.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 44 0.002 gi|22294409|dbj|BAC08239.1| tsr0688 [Thermosynechococcus elongat... 44 0.002 gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein ... 44 0.002 ErfK_YbiS_YhnG_Q92KL8_110-245_PF03734.4 44 0.002 gi|10173425|dbj|BAB04530.1| BH0811 [Bacillus halodurans C-125] 44 0.002 ErfK_YbiS_YhnG_Q92PX9_54-192_PF03734.4 44 0.002 gi|1742774|dbj|BAA15464.1| Probable carnitine operon oxidoreduct... 44 0.003 ErfK_YbiS_YhnG_Q9KEP1_54-138_PF03734.4 44 0.003 gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 44 0.003 ErfK_YbiS_YhnG_Q89DB0_182-313_PF03734.4 44 0.003 ErfK_YbiS_YhnG_Q89MP2_90-201_PF03734.4 44 0.003 ErfK_YbiS_YhnG_Q5PG17_96-233_PF03734.4 44 0.003 gi|69930975|ref|ZP_00627615.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 44 0.003 gi|12515680|gb|AAG56665.1| orf, hypothetical protein [Escherichi... 44 0.003 gi|17936219|ref|NP_533009.1| hypothetical protein Atu2336 [Agrob... 44 0.003 gi|26989044|ref|NP_744469.1| hypothetical protein PP2320 [Pseudo... 43 0.003 ErfK_YbiS_YhnG_Q5WH69_27-153_PF03734.4 43 0.003 ErfK_YbiS_YhnG_Q8D2K2_98-234_PF03734.4 43 0.004 ErfK_YbiS_YhnG_Q8EAY9_93-230_PF03734.4 43 0.004 ErfK_YbiS_YhnG_Q8DL11_2-82_PF03734.4 43 0.004 ErfK_YbiS_YhnG_Q92KF1_25-137_PF03734.4 43 0.004 ErfK_YbiS_YhnG_Q8FMX7_240-368_PF03734.4 43 0.004 gi|67938515|ref|ZP_00531039.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 43 0.004 gi|67918178|ref|ZP_00511779.1| ErfK/YbiS/YcfS/YnhG [Chlorobium l... 43 0.004 gi|56413653|ref|YP_150728.1| putative LysM domain [Salmonella en... 43 0.004 gi|15073891|emb|CAC45532.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 43 0.004 ErfK_YbiS_YhnG_Q6NAN8_135-266_PF03734.4 43 0.005 gi|15025657|gb|AAK80578.1| Uncharacterized protein, ErfK family ... 43 0.005 gi|71838162|ref|ZP_00677923.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 43 0.005 ErfK_YbiS_YhnG_Q9KNA7_90-229_PF03734.4 42 0.006 gi|15155625|gb|AAK86477.1| AGR_C_1197p [Agrobacterium tumefacien... 42 0.007 ErfK_YbiS_YhnG_Q8UCZ2_64-202_PF03734.4 42 0.008 gi|68247205|gb|EAN29293.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 42 0.008 ErfK_YbiS_YhnG_Q8UHL1_122-257_PF03734.4 42 0.008 gi|66856700|ref|ZP_00400762.1| Peptidoglycan-binding LysM:ErfK/Y... 42 0.008 gi|71837344|ref|ZP_00677109.1| Peptidoglycan-binding LysM:ErfK/Y... 42 0.008 ErfK_YbiS_YhnG_Q6N0G6_60-191_PF03734.4 42 0.009 ErfK_YbiS_YhnG_Q8KR47_93-230_PF03734.4 42 0.009 gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clos... 42 0.009 ErfK_YbiS_YhnG_Q6N1G4_67-202_PF03734.4 42 0.009 gi|48849271|ref|ZP_00303515.1| COG1376: Uncharacterized protein ... 42 0.010 gi|69929997|ref|ZP_00626874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 42 0.010 ErfK_YbiS_YhnG_Q92KJ2_100-241_PF03734.4 42 0.010 gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 42 0.010 gi|69927652|ref|ZP_00624813.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 42 0.010 gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobiu... 42 0.011 gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 42 0.011 ErfK_YbiS_YhnG_Q89FR3_116-247_PF03734.4 42 0.011 gi|49239475|emb|CAF25827.1| hypothetical protein [Bartonella qui... 42 0.012 gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 41 0.013 gi|27383268|ref|NP_774797.1| hypothetical protein bll8157 [Brady... 41 0.014 gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesor... 41 0.015 ErfK_YbiS_YhnG_Q92KL9_66-205_PF03734.4 41 0.016 gi|15073710|emb|CAC45352.1| PUTATIVE SIGNAL PEPTIDE PROTEIN [Sin... 41 0.016 gi|46192110|ref|ZP_00007275.2| COG1376: Uncharacterized protein ... 41 0.016 gi|68190182|gb|EAN04842.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 41 0.017 ErfK_YbiS_YhnG_Q6D900_96-233_PF03734.4 41 0.017 gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesor... 41 0.017 gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Pho... 41 0.018 gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Erwi... 41 0.019 gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 41 0.019 gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 41 0.021 ErfK_YbiS_YhnG_Q97FU5_105-228_PF03734.4 40 0.025 ErfK_YbiS_YhnG_Q6N3X7_92-223_PF03734.4 40 0.027 gi|68234309|ref|ZP_00573396.1| Putative peptidoglycan binding do... 40 0.027 ErfK_YbiS_YhnG_Q6D623_94-234_PF03734.4 40 0.028 gi|69937362|ref|ZP_00632028.1| Twin-arginine translocation pathw... 40 0.029 gi|46192901|ref|ZP_00005863.2| COG1376: Uncharacterized protein ... 40 0.030 gi|68002719|ref|ZP_00535287.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 40 0.031 gi|53688090|ref|ZP_00109223.2| COG1376: Uncharacterized protein ... 40 0.033 gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Barto... 40 0.035 gi|46190626|ref|ZP_00206527.1| COG1376: Uncharacterized protein ... 40 0.036 gi|76164940|gb|EAO59080.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aur... 40 0.037 ErfK_YbiS_YhnG_Q88KH0_95-232_PF03734.4 40 0.037 gi|38234386|ref|NP_940153.1| Putative lipoprotein [Corynebacteri... 40 0.038 gi|69930266|ref|ZP_00627006.1| conserved hypothetical protein [N... 40 0.041 gi|69299488|ref|ZP_00621475.1| Twin-arginine translocation pathw... 40 0.042 gi|67934945|ref|ZP_00527970.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 40 0.042 ErfK_YbiS_YhnG_Q6G2L0_77-216_PF03734.4 40 0.046 ErfK_YbiS_YhnG_Q899Q5_388-509_PF03734.4 40 0.048 gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photo... 39 0.049 ErfK_YbiS_YhnG_Q8X604_93-232_PF03734.4 39 0.050 gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 39 0.050 ErfK_YbiS_YhnG_Q89BJ1_28-145_PF03734.4 39 0.053 gi|68552645|ref|ZP_00592032.1| ErfK/YbiS/YcfS/YnhG [Prosthecochl... 39 0.054 ErfK_YbiS_YhnG_Q989D5_60-195_PF03734.4 39 0.061 gi|41326655|emb|CAF21137.1| secreted lipoprotein ErfK/YbiS/YcfS/... 39 0.062 gi|22958594|ref|ZP_00006262.1| COG1376: Uncharacterized protein ... 39 0.062 gi|20806941|ref|NP_622112.1| hypothetical protein TTE0432 [Therm... 39 0.065 ErfK_YbiS_YhnG_Q7N3U7_93-232_PF03734.4 39 0.066 gi|53802376|ref|YP_112943.1| LysM domain protein [Methylococcus ... 39 0.067 ErfK_YbiS_YhnG_Q5LRC4_82-215_PF03734.4 39 0.073 gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein ... 39 0.076 gi|68192907|gb|EAN07560.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 39 0.076 gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Brady... 39 0.076 ErfK_YbiS_YhnG_Q89UE9_98-229_PF03734.4 39 0.082 gi|23464689|ref|NP_695292.1| protein similar to YcbI of B. subti... 39 0.083 gi|29654687|ref|NP_820379.1| ErfK/YbiS/YcfS/YnhG family protein ... 39 0.086 gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus] 39 0.087 ErfK_YbiS_YhnG_Q5YMV0_180-308_PF03734.4 39 0.088 gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [S... 39 0.094 gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Brady... 39 0.096 gi|68189621|gb|EAN04286.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 39 0.096 gi|13471882|ref|NP_103449.1| probable carnitine operon oxidoredu... 39 0.100 ErfK_YbiS_YhnG_Q98KE1_92-230_PF03734.4 39 0.11 gi|15026778|gb|AAK81597.1| Uncharacterized conserved protein [Cl... 38 0.11 ErfK_YbiS_YhnG_Q6LJB5_89-230_PF03734.4 38 0.12 ErfK_YbiS_YhnG_Q8PB12_56-167_PF03734.4 38 0.12 gi|68191412|gb|EAN06068.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 38 0.12 ErfK_YbiS_YhnG_Q89VM1_60-191_PF03734.4 38 0.13 gi|15155831|gb|AAK86651.1| AGR_C_1541p [Agrobacterium tumefacien... 38 0.15 gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Noca... 38 0.15 gi|17937039|ref|NP_533828.1| hypothetical protein Atu3331 [Agrob... 38 0.15 gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Noca... 38 0.15 gi|68003733|ref|ZP_00536279.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 38 0.15 ErfK_YbiS_YhnG_Q8G821_57-179_PF03734.4 38 0.16 gi|21110266|gb|AAM38705.1| conserved hypothetical protein [Xanth... 38 0.16 gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanth... 38 0.16 gi|23006804|ref|ZP_00048959.1| COG1376: Uncharacterized protein ... 38 0.17 gi|27375732|ref|NP_767261.1| hypothetical protein blr0621 [Brady... 38 0.17 gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 38 0.18 gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulf... 37 0.20 ErfK_YbiS_YhnG_Q89E58_121-252_PF03734.4 37 0.21 gi|69929707|ref|ZP_00626584.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 37 0.21 gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Brady... 37 0.21 ErfK_YbiS_YhnG_Q6N230_94-225_PF03734.4 37 0.22 ErfK_YbiS_YhnG_YAT5_56-188_PF03734.4 37 0.22 gi|69926541|ref|ZP_00624012.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 37 0.22 gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Brady... 37 0.22 gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 37 0.23 ErfK_YbiS_YhnG_Q6NFS1_231-358_PF03734.4 37 0.26 ErfK_YbiS_YhnG_Q5YU65_123-251_PF03734.4 37 0.27 gi|68172053|ref|ZP_00545336.1| hypothetical protein Francci3DRAF... 37 0.27 ErfK_YbiS_YhnG_Q83BU9_47-172_PF03734.4 37 0.28 gi|56544165|gb|AAV90319.1| conserved hypothetical protein [Zymom... 37 0.28 ErfK_YbiS_YhnG_Q89RZ1_67-201_PF03734.4 37 0.30 gi|69937273|ref|ZP_00631965.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 37 0.30 gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Brady... 37 0.32 gi|68175646|ref|ZP_00548886.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 37 0.32 gi|15024797|gb|AAK79787.1| Fusion of predicted Zn-dependent amid... 37 0.33 gi|69935211|ref|ZP_00630191.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 37 0.33 gi|69297918|ref|ZP_00620214.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 37 0.33 ErfK_YbiS_YhnG_Q97I32_158-280_PF03734.4 37 0.33 ErfK_YbiS_YhnG_Q8UH41_160-301_PF03734.4 37 0.33 gi|3462874|gb|AAC34464.1| unknown [Rhizobium etli] 37 0.34 ErfK_YbiS_YhnG_O86068_2-104_PF03734.4 37 0.35 gi|13471264|ref|NP_102833.1| hypothetical protein mll1184 [Mesor... 37 0.35 ErfK_YbiS_YhnG_Q8UAP2_82-223_PF03734.4 37 0.38 gi|15155832|gb|AAK86652.1| AGR_C_1542p [Agrobacterium tumefacien... 37 0.39 gi|39983561|gb|AAR34954.1| ErfK/YbiS/YcfS/YnhG family protein [G... 36 0.44 gi|69300858|ref|ZP_00622319.1| similar to Uncharacterized protei... 36 0.46 gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Ta... 36 0.46 gi|15022829|gb|AAK77998.1| Uncharacterized conserved of ErfK fam... 36 0.47 ErfK_YbiS_YhnG_Q8NMT9_240-368_PF03734.4 36 0.49 gi|15608571|ref|NP_215949.1| POSSIBLE CONSERVED EXPORTED PROTEIN... 36 0.53 ErfK_YbiS_YhnG_Q74CU1_138-290_PF03734.4 36 0.54 gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodo... 36 0.55 gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Brady... 36 0.56 gi|75908663|ref|YP_322959.1| ErfK/YbiS/YcfS/YnhG [Anabaena varia... 36 0.56 ErfK_YbiS_YhnG_Q89MH4_65-200_PF03734.4 36 0.58 ErfK_YbiS_YhnG_Q5LWA4_42-184_PF03734.4 36 0.59 gi|18144285|dbj|BAB80332.1| hypothetical protein [Clostridium pe... 36 0.61 gi|33639293|emb|CAE08301.1| conserved hypothetical protein [Syne... 36 0.65 ErfK_YbiS_YhnG_Q6N3T2_113-244_PF03734.4 36 0.66 ErfK_YbiS_YhnG_Q92K56_83-221_PF03734.4 35 0.70 ErfK_YbiS_YhnG_Q98L44_27-141_PF03734.4 35 0.71 gi|46191772|ref|ZP_00008016.2| COG1376: Uncharacterized protein ... 35 0.71 gi|69929507|ref|ZP_00626384.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 35 0.73 gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesor... 35 0.73 ErfK_YbiS_YhnG_Q98JD1_93-231_PF03734.4 35 0.74 ErfK_YbiS_YhnG_Q97N27_150-284_PF03734.4 35 0.81 ErfK_YbiS_YhnG_Q6N3B5_55-166_PF03734.4 35 0.83 gi|15075086|emb|CAC46643.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [... 35 0.83 gi|17933973|ref|NP_530763.1| hypothetical protein Atu0048 [Agrob... 35 0.85 ErfK_YbiS_YhnG_O06825_123-269_PF03734.4 35 0.93 >gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110] Length = 526 Score = 303 bits (777), Expect = 1e-81 Identities = 109/203 (53%), Positives = 142/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKEL------KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PV +L K SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGP Sbjct: 46 PVPPKLLAAMVEKDMDLQSPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGP 105 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S G Sbjct: 106 KVREGDRQAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRG 165 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GY Sbjct: 166 CYAMTDEQIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGY 225 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V C +YVF Sbjct: 226 DHFEVTRQEPKVDFCEKKYVFDA 248 >gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 439 Score = 301 bits (772), Expect = 6e-81 Identities = 116/193 (60%), Positives = 147/193 (76%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K +P+ +R+FKEE LE+WK K G Y L+KSY ICKWSG LGPK EGD Q+P Sbjct: 53 KAKGMSTNAPIMMRVFKEEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAP 112 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+++P Q+NP+S Y+L+ NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q++ Sbjct: 113 EGFYTIRPQQMNPNSSYHLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVE 172 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ + Q +PFRMT NM R+RN PNY FW+ LK GYD+FE T+ PP Sbjct: 173 EIYAFARDAFRGGQEAFQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPP 232 Query: 185 TVSVCNGRYVFSK 197 V VC RYVF++ Sbjct: 233 KVDVCEARYVFNR 245 >gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009] Length = 491 Score = 297 bits (762), Expect = 1e-79 Identities = 112/203 (55%), Positives = 142/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKEL------KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PVS +L K SP+ +R+FK+E +LE+WK G +QL+KSYPIC+WSG LGP Sbjct: 54 PVSPKLVAAMQEKNMDLQSPILVRLFKQEAELEVWKQDRTGVFQLLKSYPICRWSGDLGP 113 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S G Sbjct: 114 KIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRG 173 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q+ YPF+MT N +HRN+PN FWK LK GY Sbjct: 174 CYAMTDEQIAEIYALGRESFFGGQRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGY 233 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V C +YVF Sbjct: 234 DHFEVTRQEPKVDFCEHKYVFDA 256 >gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor [Escherichia coli CFT073] Length = 246 Score = 297 bits (761), Expect = 1e-79 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 30 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 88 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 89 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 148 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 149 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 208 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 209 RKPPTVSVVNGRYVVSKPLSH 229 >gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255] Length = 492 Score = 295 bits (756), Expect = 4e-79 Identities = 110/203 (54%), Positives = 142/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKE------LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PVS + K SP+ IR+FK+E +LE+WK G++ L+KSYPIC+WSG LGP Sbjct: 41 PVSPKLVAAMTAKDMELQSPILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGP 100 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PN +D++ G TG LM+HG C S G Sbjct: 101 KTREGDRQAPEGFYSITPAQMNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRG 160 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q+ YPFRMT AN+ +HRN+PN FWK +K G Sbjct: 161 CYAMTDEQIAEIYAVGRESFFGGQRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGN 220 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V+ C +YVF Sbjct: 221 DHFEVTRQEPKVAFCERKYVFDP 243 >DUF949_Q89XW3_52-252_PF06104.2 Length = 201 Score = 293 bits (752), Expect = 1e-78 Identities = 106/191 (55%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Q+PEG Sbjct: 7 KDMDLQSPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDRQAPEG 66 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD QI EI Sbjct: 67 FYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEI 126 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 ++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR+ P V Sbjct: 127 YSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKV 186 Query: 187 SVCNGRYVFSK 197 C +YVF Sbjct: 187 DFCEKKYVFDA 197 >gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizobium meliloti] Length = 480 Score = 292 bits (749), Expect = 3e-78 Identities = 117/189 (61%), Positives = 144/189 (76%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY Sbjct: 53 MQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFY 112 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFA 128 + PNQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA Sbjct: 113 PLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFA 172 Query: 129 FVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSV 188 RDAF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+V Sbjct: 173 LARDAFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNV 232 Query: 189 CNGRYVFSK 197 C +YVF++ Sbjct: 233 CERKYVFNQ 241 >gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica serovar Typhi Ty2] Length = 246 Score = 290 bits (743), Expect = 1e-77 Identities = 158/198 (79%), Positives = 171/198 (86%), Gaps = 1/198 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 KE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY IC +SGGLGPKRR+GDF+S Sbjct: 33 KEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKS 91 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFYSVQ NQL PDSR+Y AINIGFPNAYDRAHGY GKYLMIHGACVSVGCYAMTD+ I Sbjct: 92 PEGFYSVQRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGI 151 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 DEIF FV A V GQPSVQVSIYPFRMTDANMQRH+ S DFW QLKPGYDYFEQT KP Sbjct: 152 DEIFQFVTAALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKP 211 Query: 184 PTVSVCNGRYVFSKPLSH 201 PTVS+ +GRYV SKPLSH Sbjct: 212 PTVSIVDGRYVVSKPLSH 229 >DUF949_Q92JZ0_45-245_PF06104.2 Length = 201 Score = 290 bits (743), Expect = 1e-77 Identities = 117/189 (61%), Positives = 144/189 (76%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY Sbjct: 9 MQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFY 68 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFA 128 + PNQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA Sbjct: 69 PLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFA 128 Query: 129 FVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSV 188 RDAF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+V Sbjct: 129 LARDAFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNV 188 Query: 189 CNGRYVFSK 197 C +YVF++ Sbjct: 189 CERKYVFNQ 197 >gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14] Length = 502 Score = 290 bits (743), Expect = 1e-77 Identities = 107/203 (52%), Positives = 138/203 (67%), Gaps = 6/203 (2%) Query: 1 PVSKEL------KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PV +L K SP+ IR+FK+E +LE+WK G++ L+K+YPIC+WSG LGP Sbjct: 56 PVPPKLVAAMTEKDMELQSPILIRLFKQEAELEVWKQNRSGKFALLKTYPICRWSGDLGP 115 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S G Sbjct: 116 KTREGDRQAPEGFYSISPAQMNPRSAYYLSFNTGYPNAFDKSLGRTGSELMVHGDCSSRG 175 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q YPF MT N+ +HRN+PN FWK +K G Sbjct: 176 CYAMTDEQIAEIYALGRESFFGGQHAFQFQAYPFHMTPVNLAKHRNNPNMPFWKMIKEGS 235 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE T + P V C +YVF Sbjct: 236 DHFEVTHQAPKVEFCEHKYVFDP 258 >DUF949_Q83M88_30-229_PF06104.2 Length = 200 Score = 290 bits (742), Expect = 2e-77 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 1 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 60 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 120 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 179 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 180 RKPPTVSVANGRYVVSKPLSH 200 >gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melitensis 16M] Length = 403 Score = 287 bits (735), Expect = 1e-76 Identities = 122/194 (62%), Positives = 144/194 (74%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+P Sbjct: 45 QAKGMPRTSPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAP 104 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+V+P Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ Sbjct: 105 EGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVA 164 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP Sbjct: 165 EIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPP 224 Query: 185 TVSVCNGRYVFSKP 198 V VC RYVF+ P Sbjct: 225 KVDVCEKRYVFNVP 238 >gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099] Length = 395 Score = 287 bits (734), Expect = 2e-76 Identities = 122/185 (65%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S V RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 5 SSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRP 64 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +Q+NP S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RD Sbjct: 65 SQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRD 124 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC R Sbjct: 125 AFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKR 184 Query: 193 YVFSK 197 YVF++ Sbjct: 185 YVFNQ 189 >gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefaciens str. C58] Length = 351 Score = 285 bits (731), Expect = 3e-76 Identities = 110/192 (57%), Positives = 135/192 (70%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+P Sbjct: 61 SAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAP 120 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ Sbjct: 121 EGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVG 180 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 181 EIYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQP 240 Query: 185 TVSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 241 KVSVCGRRYVFN 252 >gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 335 Score = 285 bits (729), Expect = 5e-76 Identities = 105/191 (54%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P +PV +RIFK+E +LE+WK G++ L+K+YP+C+WSG LGPK++ GD Q+PEG Sbjct: 47 KSMSPSAPVLVRIFKQESELEVWKRDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEG 106 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YYL+ N+G+PN + A GYTG+ LM+HGAC S GC+A+TD + EI Sbjct: 107 FYHVSARMLNPNSQYYLSFNLGYPNRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEI 166 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R+A GGQ S QV +PFRMT NM ++RN PN+ FW LK GYD FE TR+ P V Sbjct: 167 YAVAREALKGGQGSFQVQAFPFRMTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKV 226 Query: 187 SVCNGRYVFSK 197 S C GRYVF + Sbjct: 227 SYCEGRYVFDR 237 >DUF949_Q98FX6_1-193_PF06104.2 Length = 193 Score = 282 bits (723), Expect = 3e-75 Identities = 122/185 (65%), Positives = 145/185 (78%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S V RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P Sbjct: 5 SSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRP 64 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +Q+NP S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RD Sbjct: 65 SQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRD 124 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC R Sbjct: 125 AFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKR 184 Query: 193 YVFSK 197 YVF++ Sbjct: 185 YVFNQ 189 >gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Medievalis str. 91001] Length = 250 Score = 281 bits (720), Expect = 6e-75 Identities = 136/197 (69%), Positives = 163/197 (82%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 33 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFY + L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 92 KSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 151 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ N+QRHRNS +FW+QL+PGY YF + R Sbjct: 152 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNR 211 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 212 MPPPVSVSNGQYVLSPP 228 >DUF949_Q8YJP4_41-241_PF06104.2 Length = 201 Score = 281 bits (720), Expect = 7e-75 Identities = 122/194 (62%), Positives = 144/194 (74%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+P Sbjct: 5 QAKGMPRTSPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAP 64 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+V+P Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ Sbjct: 65 EGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVA 124 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP Sbjct: 125 EIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPP 184 Query: 185 TVSVCNGRYVFSKP 198 V VC RYVF+ P Sbjct: 185 KVDVCEKRYVFNVP 198 >gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 247 Score = 279 bits (715), Expect = 2e-74 Identities = 110/202 (54%), Positives = 142/202 (70%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGP Sbjct: 36 PLPQEVQNKMVLHNIDPYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGD Q+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVG Sbjct: 96 KYKEGDLQTPEGFYTISADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAM D + +I+AF RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GY Sbjct: 156 CYAMGDKNMAQIYAFARDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D+FE+ RKPPTV V RYVFS Sbjct: 216 DFFEENRKPPTVDVYKKRYVFS 237 >DUF949_Q7CS68_57-257_PF06104.2 Length = 201 Score = 278 bits (713), Expect = 4e-74 Identities = 110/192 (57%), Positives = 135/192 (70%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+P Sbjct: 5 SAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAP 64 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ Sbjct: 65 EGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVG 124 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 125 EIYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQP 184 Query: 185 TVSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 185 KVSVCGRRYVFN 196 >gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefaciens str. C58] Length = 452 Score = 278 bits (712), Expect = 6e-74 Identities = 114/191 (59%), Positives = 139/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PEG Sbjct: 72 KGMDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEG 131 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY++ P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI EI Sbjct: 132 FYNLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEI 191 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 + F RDAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP V Sbjct: 192 YGFARDAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDV 251 Query: 187 SVCNGRYVFSK 197 +VC +YVF++ Sbjct: 252 NVCEKKYVFNQ 262 >gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] Length = 247 Score = 278 bits (711), Expect = 7e-74 Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + LI Y ICKWSG LGP Sbjct: 36 PLPREVQNRMVLYNVDPYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGDFQ+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S G Sbjct: 96 KYKEGDFQTPEGFYTISASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+M+D + +I+AF RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GY Sbjct: 156 CYSMSDKNMAQIYAFARDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D FE+ RKPPTV V RYVF+ Sbjct: 216 DLFEKNRKPPTVDVYEKRYVFN 237 >gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 244 Score = 277 bits (710), Expect = 9e-74 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ AK+G EY+L++ YPICK+SGGLGPKR EGD Sbjct: 32 PIAKELKQQLLGSPIYIQIFKEERIFELY-AKVGNEYRLLEQYPICKYSGGLGPKRVEGD 90 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 91 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 150 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 151 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 210 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 211 NQPPAITVFNGQYVVNPPL 229 >DUF949_Q66E07_28-227_PF06104.2 Length = 200 Score = 277 bits (709), Expect = 1e-73 Identities = 138/197 (70%), Positives = 164/197 (83%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 2 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFYS+ L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 61 KSPEGFYSINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 120 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ NMQRHRNS +FW+QL+PGY YF + R Sbjct: 121 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNR 180 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 181 MPPPVSVSNGQYVLSPP 197 >DUF949_Q7CSY6_66-266_PF06104.2 Length = 201 Score = 275 bits (703), Expect = 5e-73 Identities = 114/191 (59%), Positives = 139/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PEG Sbjct: 7 KGMDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEG 66 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY++ P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI EI Sbjct: 67 FYNLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEI 126 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 + F RDAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP V Sbjct: 127 YGFARDAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDV 186 Query: 187 SVCNGRYVFSK 197 +VC +YVF++ Sbjct: 187 NVCEKKYVFNQ 197 >gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella typhimurium LT2] Length = 239 Score = 274 bits (701), Expect = 1e-72 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 39 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 98 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 99 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 158 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 159 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 218 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 219 RRLPTITVENRRYKISP 235 >DUF949_Q6D1H5_32-231_PF06104.2 Length = 200 Score = 272 bits (697), Expect = 3e-72 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ AK+G EY+L++ YPICK+SGGLGPKR EGD Sbjct: 1 PIAKELKQQLLGSPIYIQIFKEERIFELY-AKVGNEYRLLEQYPICKYSGGLGPKRVEGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 60 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 120 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 179 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 180 NQPPAITVFNGQYVVNPPL 198 >DUF949_Q57JI8_39-239_PF06104.2 Length = 201 Score = 271 bits (694), Expect = 6e-72 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 1 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 61 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 120 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 121 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 180 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 181 RRLPTITVENRRYKISP 197 >DUF949_Q6G1P2_42-242_PF06104.2 Length = 201 Score = 270 bits (691), Expect = 1e-71 Identities = 109/186 (58%), Positives = 136/186 (73%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + LI Y ICKWSG LGPK +EGDFQ+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S GCY+M+D + +I+AF Sbjct: 71 SASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GYD FE+ RKPPTV V Sbjct: 131 RDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYE 190 Query: 191 GRYVFS 196 RYVF+ Sbjct: 191 KRYVFN 196 >DUF949_Q6G1H8_42-242_PF06104.2 Length = 201 Score = 270 bits (691), Expect = 2e-71 Identities = 108/186 (58%), Positives = 134/186 (72%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGPK +EGD Q+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVGCYAM D + +I+AF Sbjct: 71 SADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GYD+FE+ RKPPTV V Sbjct: 131 RDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYK 190 Query: 191 GRYVFS 196 RYVFS Sbjct: 191 KRYVFS 196 >gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 238 Score = 268 bits (687), Expect = 4e-71 Identities = 101/187 (54%), Positives = 135/187 (72%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+P++IRIFK+ LE+W G ++L K+Y IC SG LGPK R GD Q+PEGFY V Sbjct: 52 GAPIFIRIFKQSATLEVWLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQAPEGFYFVN 111 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 + NP S+++L+ N+G+PNAYDRAHG TG LM+HG CVS+GCYAMTD+ I+EI+A + Sbjct: 112 AQRFNPWSKFHLSFNLGYPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGIEEIYALAQ 171 Query: 132 DAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNG 191 + GQP +V I+PFR++D ++R +N+ Y FW LK G+DYFEQT+ PP V+V N Sbjct: 172 KSLEDGQPFFRVHIFPFRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMPPNVNVQNK 231 Query: 192 RYVFSKP 198 RYVFS P Sbjct: 232 RYVFSAP 238 >gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 264 bits (676), Expect = 9e-70 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 41 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 101 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 160 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 161 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 220 Query: 191 GRYVFSK 197 G+YV + Sbjct: 221 GQYVVNA 227 >DUF949_Q7N7F5_31-231_PF06104.2 Length = 201 Score = 261 bits (667), Expect = 9e-69 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 11 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 71 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 131 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 190 Query: 191 GRYVFSK 197 G+YV + Sbjct: 191 GQYVVNA 197 >gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 243 bits (620), Expect = 2e-63 Identities = 90/167 (53%), Positives = 121/167 (72%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIG 88 ++A+ G Y L+K+YPI +WS LGPK ++GD Q+PEGFY++ P Q+NP+S YYL+ ++G Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62 Query: 89 FPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 +PNA DRA G TG Y+M+HG C S GC+AMTDA + EI+A R+AF GGQ + Q YPF Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNGGQRAFQFQSYPF 122 Query: 149 RMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVF 195 RMT AN+ + RN PN FW+ LK G DYFE ++ P V+ C +YVF Sbjct: 123 RMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169 >gi|54297427|ref|YP_123796.1| Legionella secretion system protein A [Legionella pneumophila str. Paris] Length = 243 Score = 181 bits (461), Expect = 7e-45 Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 20/192 (10%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + P + + FK ERK+ELW E+ I YP+ +SG LGPK RE D Sbjct: 57 YFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDK 116 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGC 115 Q PEG Y + NP S +L++ I +PN++DR GY G + IHG +SVGC Sbjct: 117 QIPEGIYKLVN--FNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGC 174 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS----PNY--DFWKQ 169 A+ D ID++F R G ++QV I P D Q+ S P + + +KQ Sbjct: 175 LAVGDLAIDQLFILAR---RVGLKNIQVIIAP---NDLRYQKPSTSTFAQPRWLPELYKQ 228 Query: 170 LKPGYDYFEQTR 181 + F++T+ Sbjct: 229 ISESLKPFKKTK 240 >gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] Length = 167 Score = 165 bits (418), Expect = 7e-40 Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 33/158 (20%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 L G + + K ERKL L ++KSY + GPK EGD ++PEGFY Sbjct: 23 SLEGKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFY 77 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------- 110 + + + + Y L+++I +PNA D A G +MIHG Sbjct: 78 WIDWRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTL 135 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E+++ V+D + + I P Sbjct: 136 DWTNGCIAMNNTDMREVWSVVKDGTL-------IEIRP 166 >gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudomonas putida KT2440] Length = 184 Score = 164 bits (415), Expect = 1e-39 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 33/165 (20%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 +Q + + + K ER+L+L + +K+Y I G K REGD Sbjct: 34 TPSPSQQAMQPLIDKVLVIKSERRLQLISRG-----EPLKTYRISLGKQPKGAKEREGDK 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 ++PEG Y + + + R+ LA++I +PN D A G +MIHG Sbjct: 89 KTPEGLYWLDWRKQS--DRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYP 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E++ VRD + + I P Sbjct: 147 EWYFHTLDWTDGCIAMRNRDMQEVWDLVRDGTL-------IEIRP 184 >gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099] Length = 163 Score = 162 bits (410), Expect = 5e-39 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 33/154 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 22 AEKVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML 76 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------V 111 NP+S + +I+I +PNA D A G +MIHG Sbjct: 77 DWR--NPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDW 134 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + GC A+TD+ +DEI+A V D + I Sbjct: 135 TDGCIAVTDSDMDEIWAMVADG-------TPIEI 161 >ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 Length = 139 Score = 161 bits (407), Expect = 1e-38 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 33/153 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 1 EKVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYMLD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 NP+S + +I+I +PNA D A G +MIHG + Sbjct: 56 WR--NPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+TD+ +DEI+A V D + I Sbjct: 114 DGCIAVTDSDMDEIWAMVADG-------TPIEI 139 >gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 172 Score = 159 bits (404), Expect = 3e-38 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 33/153 (21%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I + K ERKL L Q +KSY + GPKRREGD ++PEG Y + Sbjct: 34 VDKILVVKSERKLMLLSRG-----QPLKSYKVSLGKRPTGPKRREGDQRTPEGLYWIDWR 88 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVG 114 + + +Y L+++I +PN D+A G +M+HG + G Sbjct: 89 KAS--DKYNLSMHISYPNIRDQAQARAEGVPPGGMIMLHGTPLDENYPEWYFHGLDWTEG 146 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM + I E+++ V+D + + I P Sbjct: 147 CIAMRNDDIREVWSLVKDGTL-------IEIRP 172 >gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protein conserved in bacteria [Psychrobacter cryohalolentis K5] Length = 187 Score = 158 bits (401), Expect = 6e-38 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 35/163 (21%) Query: 4 KELKQQLPGSP--VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 E KQ + + + + K R L+L ++IKSY I +G K+++GD Sbjct: 37 SENKQAMLNNIMIDKVFVDKSARTLQLLSDN-----KVIKSYHIALGGNPVGHKQQQGDK 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA------- 109 ++P G Y + N S++Y +I++ +PNA D+A G +MIHG Sbjct: 92 RTPTGSYILDYK--NEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHL 149 Query: 110 -------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + GC A+TD ++DEI A V + I Sbjct: 150 AAINQQRDWTDGCIAVTDNEMDEIMAAVEIG-------TPIEI 185 >gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 188 Score = 158 bits (400), Expect = 7e-38 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 33/156 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G + I K E + L + + +++K Y I G K +EGD ++P+G Y++ Sbjct: 47 MGKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTL 101 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CV 111 + PDS YY +I+I +PN D+ G +MIHG Sbjct: 102 DYKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNW 159 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+A++DE++ V + + I+P Sbjct: 160 TDGCIAITNAEMDEVWKVVDEG-------TPIEIWP 188 >gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5] Length = 167 Score = 157 bits (399), Expect = 1e-37 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 34/160 (21%) Query: 8 QQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + L G + + + K +L+L + +K+Y I GPK EGD ++PEG Sbjct: 22 ETLDGKVIEKVLVLKSAHQLQLINGG-----KPLKTYRISLGKKPKGPKLMEGDKRTPEG 76 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------- 110 Y + + + RY LA++I +PN D A G +MIHG Sbjct: 77 LYWLDWRKTS--DRYNLAMHISYPNITDAARSRREGVDPGGMIMIHGTPDTEEFPEQYFH 134 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E++ V+D + + I P Sbjct: 135 TLDWTDGCIAMRNVDMREVWGLVKDGTM-------IEIRP 167 >ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 Length = 139 Score = 157 bits (398), Expect = 1e-37 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + + K ERKL L ++KSY + GPK EGD ++PEGFY + Sbjct: 1 GKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 + + + Y L+++I +PNA D A G +MIHG + Sbjct: 56 WRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFV 135 GC AM + + E+++ V+D + Sbjct: 114 NGCIAMNNTDMREVWSVVKDGTL 136 >gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 334 Score = 157 bits (398), Expect = 1e-37 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I I K +R+L L+ + +KSY I GPK REGD ++PEG Y + Sbjct: 195 AVTRILIEKGDRRLTLFSRN-----EALKSYRIALGGAPSGPKEREGDNKTPEGAYVIDS 249 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVSV 113 N +S+Y+L+++I +PN D+ G +MIHG A + Sbjct: 250 K--NGNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTR 307 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A++D +I+EI+ V+ V I P Sbjct: 308 GCVAVSDEEIEEIYKLVQIG-------TAVEIRP 334 >gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 167 Score = 156 bits (396), Expect = 2e-37 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 33/159 (20%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 Q + + K E +L + + + +++KSY I G K +EGD ++P+G Sbjct: 23 SQTTAKVDLVVVNKSESRLSVMR-----DGRVVKSYLIAMGDVPSGHKLKEGDQRTPQGR 77 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA------------- 109 Y + + DS +Y +I+I +PN D+ G +MIHG Sbjct: 78 YVLDYKKS--DSAFYKSIHISYPNEEDKLRADALGIRAGGMIMIHGENPRSTLPPEEAQK 135 Query: 110 -CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+ ++DE++ + + I+P Sbjct: 136 YNWTNGCIAVTNKEMDELWQMIDAG-------TPIEIWP 167 >gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 187 Score = 156 bits (396), Expect = 2e-37 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y I G K +EGD ++PEGFY + Sbjct: 48 PIDKVLVLKSARQLQLISGG-----EALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDW 102 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +M+HG + Sbjct: 103 RK--PSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN 160 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+ + + EI+ V+D + + I P Sbjct: 161 GCIALKNNDMREIWDLVKDGTM-------IEIRP 187 >DUF949_Q60B45_95-280_PF06104.2 Length = 186 Score = 156 bits (395), Expect = 3e-37 Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW +Y+LI+ Y I SG GPK R+GD Sbjct: 1 PYFERAGVAFPPREVVLVGLKQEKKLELWARDGS-DYRLIRHYDIQAASGSAGPKLRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D H G + IHG VS G Sbjct: 60 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 118 CLAMGDEAIEELFVLTA---QVGKENVKVVIAP 147 >gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath] Length = 292 Score = 156 bits (394), Expect = 4e-37 Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW +Y+LI+ Y I SG GPK R+GD Sbjct: 95 PYFERAGVAFPPREVVLVGLKQEKKLELWARDGS-DYRLIRHYDIQAASGSAGPKLRQGD 153 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D H G + IHG VS G Sbjct: 154 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 211 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 212 CLAMGDEAIEELFVLTA---QVGKENVKVVIAP 241 >gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] Length = 160 Score = 156 bits (394), Expect = 4e-37 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 27/149 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + ++K ER + L +++SY I G K EGD ++PEG Y + Sbjct: 26 PQVTRVLVYKGERMMYLMHNND-----VLESYEIELGFAPEGHKLEEGDGRTPEGEYMID 80 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVGCYAM 118 NP+S++YL+I I +PN D A G + IHG +VGC A+ Sbjct: 81 RR--NPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAV 138 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 T+A++ +I+A V + +SIYP Sbjct: 139 TNAEMRQIYAMVENG-------TPISIYP 160 >gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewanella oneidensis MR-1] Length = 171 Score = 156 bits (394), Expect = 4e-37 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 33/155 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 31 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 85 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVS 112 + DS YY +I+I +PN D+ G +MIHG + Sbjct: 86 YKKS--DSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 143 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+A++DE++ V + + I+P Sbjct: 144 DGCIAITNAEMDEVWKAVDEG-------TPIEIWP 171 >gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 162 Score = 156 bits (394), Expect = 4e-37 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 27/152 (17%) Query: 9 QLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + G PV I + K RK+ L E +++ Y + +G K+ EGD ++PEG Sbjct: 18 RYNGPPVTSIVVNKGSRKMYLLN-----ESKVLTEYKVGLGFAPVGHKQVEGDGRTPEGT 72 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------ 110 Y + NP S++YL++ I +PN+ DRAH G + IHG Sbjct: 73 YLIDRR--NPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRRAARV 130 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+T+ +I+EI++ V + + + Sbjct: 131 RDWTAGCIAVTNDEIEEIWSMVNNGTLITLRA 162 >gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 140 Score = 155 bits (393), Expect = 5e-37 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 27/144 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K R++ L + + +++SY I +G K +EGD ++PEG Y++ N Sbjct: 11 IVVYKSRREMLLLRGES-----ILRSYRIALGRDPIGHKFQEGDGRTPEGCYTIDRR--N 63 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------ACVSVGCYAMTDAQI 123 P S+Y+L+++I +P A D G +MIHG + + GC A+++ ++ Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 DEI++ V D + I P Sbjct: 124 DEIWSLVPDG-------TPIEILP 140 >gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella burnetii RSA 493] Length = 233 Score = 155 bits (392), Expect = 6e-37 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K P + + +FK +++LW G ++ I+S+PI SGG GPK +GD Sbjct: 54 PYFKRAGVSYPPKDISLLVFKNSHRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGD 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + NP SR+ L++ + +PN+ DR + G + IHG+ S+G Sbjct: 113 HQVPEGVYKIV--GFNPASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIG 170 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C + + I+++F A++ G+ ++V I P Sbjct: 171 CIPIGNKAIEQLFVL---AYLVGERHIKVIIAP 200 >gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pseudomonas syringae pv. tomato str. DC3000] Length = 208 Score = 154 bits (391), Expect = 9e-37 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 69 KIDKVLVLKSARQLQLISGG-----EALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 123 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 124 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 181 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+ + + EI+ V+D + + I P Sbjct: 182 GCIALKNNDMREIWDLVKDGTM-------IEIRP 208 >gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 333 Score = 154 bits (390), Expect = 1e-36 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 33/155 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S I I K+ R++ L ++K+Y I +GPK R+GD ++PEG Y++ Sbjct: 193 PSLDKILIEKQARRMMLISKG-----AVLKTYRIALGGDPIGPKERQGDNKTPEGAYTID 247 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 N DSRY+ A++I +PN DR G +MIHG + Sbjct: 248 AR--NRDSRYHRALHISYPNERDRKRARELGVSPGGNIMIHGIKNGFSWVGDAHAGVDWT 305 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+TD +I+EI + + V I P Sbjct: 306 KGCIAVTDEEIEEIDTLAPNGTI-------VEIRP 333 >gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 171 Score = 153 bits (388), Expect = 2e-36 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 34/151 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG-GLGPKRREGDFQSPEGFYSVQPNQL 75 + + K +L+L + + +KSY I G GPK EGD ++PEGFY + + Sbjct: 35 VLVLKSAHQLQLIA-----DGKPLKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRKT 89 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCY 116 + ++ L+++I +PN D A G +MIHG + GC Sbjct: 90 SE--KFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCI 147 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM + + E++ V D + + I P Sbjct: 148 AMRNVDMREVWNLVPDGTM-------IEIRP 171 >gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 165 Score = 153 bits (387), Expect = 3e-36 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K E +++++ +LIKSY I G K +EGD ++P+G Y + Sbjct: 26 KVDLVVVNKAEAQMQVFYRG-----ELIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDF 80 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS YY +I+I +PN D G +MIHG + Sbjct: 81 KK--ADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTN 138 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+ +DE++ + P + I+P Sbjct: 139 GCIAVTNRDMDELWQLID-------PGTPIEIWP 165 >ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 Length = 138 Score = 152 bits (386), Expect = 3e-36 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 26/141 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 1 KIDKVLVLKSARQLQLISGG-----EALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 55 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 56 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 113 Query: 114 GCYAMTDAQIDEIFAFVRDAF 134 GC A+ + + EI+ V+D Sbjct: 114 GCIALKNNDMREIWDLVKDGT 134 >gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 175 Score = 152 bits (385), Expect = 4e-36 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 33/163 (20%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 ++ P + + ++K +R LEL + LI+SY + +GPK R GDF++ Sbjct: 27 QDPDLASPPTVDRVVVYKSKRLLELRSGQN-----LIRSYRVALGRNPVGPKVRAGDFRT 81 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC-------- 110 PEG Y + L SR++ +I+I +PN D A G +MIHG Sbjct: 82 PEGIYRLDRRSL--QSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGP 139 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+A++ EI+ VR+ + I P Sbjct: 140 SHASFDWTKGCIAVTNAEMTEIWHLVRNG-------TPIEILP 175 >ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 Length = 138 Score = 152 bits (385), Expect = 4e-36 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 26/141 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 + + K ER+L+L + +K+Y I G K REGD ++PEG Y + Sbjct: 2 IDKVLVIKSERRLQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWR 56 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVG 114 + + R+ LA++I +PN D A G +MIHG + G Sbjct: 57 KQS--DRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDG 114 Query: 115 CYAMTDAQIDEIFAFVRDAFV 135 C AM + + E++ VRD + Sbjct: 115 CIAMRNRDMQEVWDLVRDGTL 135 >DUF949_Q6LJZ6_66-236_PF06104.2 Length = 171 Score = 151 bits (382), Expect = 1e-35 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 12/152 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW AK G + IK Y I K SG GPK REGD Sbjct: 2 MFEQVGVQYPPEQIAMFALKEEMQVELW-AKDGEAWVYIKRYDIAKISGKSGPKLREGDH 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 61 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 118 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM D I+E+F V A + +VQV I P Sbjct: 119 LAMGDIAIEELFLLVERAQI---QNVQVVISP 147 >gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Erythrobacter litoralis HTCC2594] Length = 169 Score = 150 bits (380), Expect = 2e-35 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 32/164 (19%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREG 59 P + + + P ++ + K +R L L++ + ++ Y + LG KR EG Sbjct: 21 PTPQPVSVEAPP-VDFLLVDKSDRTLALYR-----DGAEVRRYTGLQFGDAPLGHKRFEG 74 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC---- 110 D ++PEG Y++ NP+S YYL++ + +PNA DRA+ G + +HG Sbjct: 75 DERTPEGRYTIDTR--NPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLP 132 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A T+A++DE++ VRD + I P Sbjct: 133 AGRMPGDWTDGCIAFTNAEMDELWRLVRDG-------TPIEIRP 169 >gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] Length = 171 Score = 150 bits (380), Expect = 2e-35 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 26/141 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 ++I K ER++ L + + IK Y + G K +EGD ++PEG Y + Sbjct: 33 IDLVKIDKSERRMYLLENG-----KTIKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYK 87 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVG 114 + DS +Y A++I +PN D + G +MIHG + G Sbjct: 88 K--EDSSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNG 145 Query: 115 CYAMTDAQIDEIFAFVRDAFV 135 C A+T++++D+ + V+ Sbjct: 146 CIALTNSEMDQFMSLVKVGTK 166 >gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 167 Score = 150 bits (380), Expect = 2e-35 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 30/162 (18%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDF 61 S + P +R+ K R+L L A + ++S+ I LG KR EGD Sbjct: 19 SASANEIRPEDIASVRVEKSARRLLLLDA----DGATLRSFSNIQLGDAPLGHKRFEGDE 74 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 ++PEG Y + N S Y+L+++I +P+A DRA+ G + IHG Sbjct: 75 RTPEGRYVIDHG--NARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFIHGQPNSLASG 132 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+++A+IDEI+A V D + I P Sbjct: 133 RIEGDWTDGCIALSNAEIDEIWALVGDG-------TPIEIVP 167 >gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 181 Score = 149 bits (378), Expect = 3e-35 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K ++ + + + + IKSY I G K +EGD ++P+G Y + Sbjct: 42 KVDLVVVNKSASRMSIIR-----DGKTIKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDY 96 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVSV 113 + DS +Y +I+I +PN D+ G +MIHG + Sbjct: 97 KKS--DSAFYKSIHISYPNEEDKLRADALGISPGGMIMIHGENPKSTLPPEEAQKYNWTN 154 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+ ++DE++ + +P + I+P Sbjct: 155 GCIAVTNKEMDELWRMI-------EPGTPIEIWP 181 >gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 202 Score = 149 bits (376), Expect = 5e-35 Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 26/156 (16%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + ++ + I I K RK+ L + +++K Y + G K+ EGD ++ Sbjct: 54 SKFRRYYGPAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKT 108 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC-------- 110 PEG Y + NP+S ++L++ I +PN+ D A+ G + IHG Sbjct: 109 PEGTYLIDRR--NPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKK 166 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+ + +I+EI+A VRD V + Sbjct: 167 AKKQPDWTAGCIAVKNDEIEEIYAMVRDGTVITLRA 202 >gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] Length = 246 Score = 149 bits (376), Expect = 6e-35 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 12/152 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW AK G + IK Y I K SG GPK REGD Sbjct: 67 MFEQVGVQYPPEQIAMFALKEEMQVELW-AKDGEAWVYIKRYDIAKISGKSGPKLREGDH 125 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 126 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 183 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM D I+E+F V A + +VQV I P Sbjct: 184 LAMGDIAIEELFLLVERAQI---QNVQVVISP 212 >ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 Length = 139 Score = 148 bits (375), Expect = 6e-35 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 26/143 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I I K RK+ L + +++K Y + G K+ EGD ++PEG Y + Sbjct: 1 PAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VS 112 NP+S ++L++ I +PN+ D A+ G + IHG + Sbjct: 56 RR--NPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFV 135 GC A+ + +I+EI+A VRD V Sbjct: 114 AGCIAVKNDEIEEIYAMVRDGTV 136 >gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 153 Score = 148 bits (374), Expect = 8e-35 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 33/152 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 14 AVDLVKVDKSKRRMYLMEQG-----TILKEYRIALGASPKGHKQEEGDNRTPEGEYTLDY 68 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +++I +P+A D G + IHG + Sbjct: 69 --VIEDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTN 126 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+T+ ++DE V + I Sbjct: 127 GCIAITNEEMDEFIQLVEMG-------TPIQI 151 >gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 166 Score = 147 bits (373), Expect = 1e-34 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 29/153 (18%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G PV +++ K +RK+ L ++++ Y + G K+ EGD ++PEG Y Sbjct: 28 YDGPPVTSVQVHKADRKMYLLNGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGVY 82 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG---------ACVSVG 114 + NP S Y+L++ I +PN D+ G + IHG + G Sbjct: 83 FIDRQ--NPRSTYHLSLGISYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAG 140 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C A+TD +++E+++ VR + I P Sbjct: 141 CIAITDDEVEEVYSMVRLG-------TPIYILP 166 >gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 213 Score = 147 bits (373), Expect = 1e-34 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 31/162 (19%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + K + + K R++ L ++K+Y I + LG K+ EGD + Sbjct: 66 PSKFKTYSGPPVTQVVVNKGARQMLLLNGN-----TVLKAYRIGLGNEPLGHKQFEGDGK 120 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------- 108 +PEG Y + NPDSRY+L+I I +PN +D G + IHG Sbjct: 121 TPEGLYYIDRR--NPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALS 178 Query: 109 ---ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+TDA++++I+A VRD + I P Sbjct: 179 RLRQDWTAGCIAVTDAEVEDIYAMVRDG-------TPIMITP 213 >ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 Length = 139 Score = 147 bits (372), Expect = 2e-34 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 33/153 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 1 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVS 112 + DS YY +I+I +PN D+ G +MIHG + Sbjct: 56 YKKS--DSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+T+A++DE++ V + + I Sbjct: 114 DGCIAITNAEMDEVWKAVDEG-------TPIEI 139 >gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 147 bits (371), Expect = 2e-34 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 28/149 (18%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 Q I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG Sbjct: 54 QAEELKVERIVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGL 108 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC------------ 110 YS+ NP S+Y A+++ +PN D +A G + G +MIHG Sbjct: 109 YSIDYK--NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLI 166 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFV 135 + GC A+T+ +I+EI++ V++ + Sbjct: 167 HPMNWTQGCVAVTNPEIEEIYSLVKEKTL 195 >gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 171 Score = 147 bits (371), Expect = 2e-34 Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 30/155 (19%) Query: 9 QLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 G P+ I + K +RK+ L K +++KSY + + GPK+ EGD ++PEG Sbjct: 31 TYQGPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDGRTPEGM 85 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG----------ACVS 112 Y + + NP SRY+L++ I +P+A D A G + IHG A + Sbjct: 86 YFID--RFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRALNRADWT 143 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+TD +I+EIF +R P V + IYP Sbjct: 144 AGCIAVTDEEIEEIFTMLR-------PGVPIFIYP 171 >gi|37675934|ref|NP_936330.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 161 Score = 146 bits (370), Expect = 3e-34 Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 33/153 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ Sbjct: 21 EQVDWVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLD 75 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 + +S +Y +++I +PN D G + +HG + Sbjct: 76 Y--VTEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWT 133 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+T+ ++DE V+ + I Sbjct: 134 NGCIALTNQEMDEFIRLVKMG-------TPIHI 159 >gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str. N16961] Length = 194 Score = 146 bits (369), Expect = 3e-34 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 33/152 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +++ K +R++ L + ++I+ Y I G K++EGD ++PEG Y + Sbjct: 55 QVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF 109 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +I+I +PN D G + IHG + Sbjct: 110 --IIEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTN 167 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+T+ ++DE + V QP V + I Sbjct: 168 GCIAITNQEMDEFLSLV-------QPGVPILI 192 >ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 Length = 139 Score = 144 bits (365), Expect = 1e-33 Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 33/153 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ Sbjct: 1 EQVDWVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 + +S +Y +++I +PN D G + +HG + Sbjct: 56 Y--VTEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC A+T+ ++DE V+ + I Sbjct: 114 NGCIALTNQEMDEFIRLVKMG-------TPIHI 139 >gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633] Length = 165 Score = 144 bits (364), Expect = 1e-33 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 26/141 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 26 AVDLVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY 80 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +++I +P+A D + G + IHG + Sbjct: 81 --VIEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 138 Query: 114 GCYAMTDAQIDEIFAFVRDAF 134 GC A+T+ ++DE V Sbjct: 139 GCIALTNEEMDEFIQLVTMGT 159 >gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 144 bits (363), Expect = 2e-33 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 28/141 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ N Sbjct: 78 IVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK--N 130 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------VSVGC 115 P S++ ++++ +PN D A+ G +MIHG ++GC Sbjct: 131 PKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGC 190 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 A+T+ +I+EI+A V++ + Sbjct: 191 IAVTNKEIEEIYALVKERTLV 211 >gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 192 Score = 144 bits (363), Expect = 2e-33 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 33/152 (21%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + K ER L L+ +KSY I +G K R+GD ++PEG YS+ Sbjct: 55 DSLVAQKGERLLHLYSGG-----AAVKSYRIALGFNPVGAKLRQGDGKTPEGRYSISER- 108 Query: 75 LNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VSVGC 115 NP S Y+L++ I +P+ DR G + IHG + GC Sbjct: 109 -NPQSSYHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGC 167 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 A+T+ +I+E++ V V IYP Sbjct: 168 IAVTNDEIEELWKAVPVG-------TPVIIYP 192 >gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 188 Score = 142 bits (359), Expect = 5e-33 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 28/147 (19%) Query: 9 QLPGSP-VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG-GLGPKRREGDFQSPEG 66 LP I + K ++ + L + +++K+Y I S G K+REGD ++PEG Sbjct: 39 ALPEQQADRIVVSKGDKTMYLLRGD-----RILKTYRIAMGSNWNQGHKQREGDERTPEG 93 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------- 110 Y + NP S +L++++ +PNA D G +MIHG Sbjct: 94 TYRIDWR--NPRSIAHLSLHVSYPNAEDSERARQAGYSPGGNIMIHGLPNGWGAMGRLHR 151 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAF 134 + GC A+T+ ++ EI++ + Sbjct: 152 LLDWTDGCIAVTNDEMREIWSLTPNGT 178 >gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 309 Score = 142 bits (358), Expect = 6e-33 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 33/155 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y + Sbjct: 169 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVI- 222 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 223 -EGRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 281 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+TD +I+EI + V V I P Sbjct: 282 QGCIAVTDEEIEEIAEAAPNGTV-------VEIRP 309 >ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 Length = 139 Score = 142 bits (358), Expect = 6e-33 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 26/141 (18%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 2 AVDLVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY 56 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +++I +P+A D + G + IHG + Sbjct: 57 --VIEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 114 Query: 114 GCYAMTDAQIDEIFAFVRDAF 134 GC A+T+ ++DE V Sbjct: 115 GCIALTNEEMDEFIQLVTMGT 135 >ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 Length = 141 Score = 141 bits (357), Expect = 8e-33 Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 28/144 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ Sbjct: 2 KVERIVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDY 56 Query: 73 NQLNPDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHGAC----------------V 111 NP S+Y A+++ +PN D +A G + G +MIHG Sbjct: 57 K--NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNW 114 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFV 135 + GC A+T+ +I+EI++ V++ + Sbjct: 115 TQGCVAVTNPEIEEIYSLVKEKTL 138 >gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 186 Score = 141 bits (355), Expect = 1e-32 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 33/149 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K R L L + + + I+SY I + G K+ EGD ++PEG Y + N Sbjct: 49 ILVIKSTRALHLLR-----DGETIRSYDISLGAAPEGHKQSEGDERTPEGRYEIDWR--N 101 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCYA 117 P+S +L+++I +PNA D+A G +MIHG + GC A Sbjct: 102 PNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCIA 161 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 +T+A++ EI++ V D ++I Sbjct: 162 VTNAEMREIWSLVPDG-------TPITIA 183 >gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 209 Score = 139 bits (352), Expect = 3e-32 Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 37/169 (21%) Query: 1 PVSKELKQQLPGSPVY-----IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 P+ + Q P +P+ I + K R++ +++ G +++ I G K Sbjct: 56 PIFQRPPVQ-PEAPIASPVRRILVEKSARRMTVYQ--ESGPP---RTFRIALGFSPEGDK 109 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC 110 REGD ++PEG + + +LN S Y+L++ I +P + R G +MIHG Sbjct: 110 SREGDGRTPEGIFRID--RLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIHGQP 167 Query: 111 ------------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+ +A+I+EIFA R +V I P Sbjct: 168 NQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHARIG-------TEVEILP 209 >ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 Length = 141 Score = 139 bits (350), Expect = 5e-32 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 28/141 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ N Sbjct: 6 IVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK--N 58 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------VSVGC 115 P S++ ++++ +PN D A+ G +MIHG ++GC Sbjct: 59 PKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGC 118 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 A+T+ +I+EI+A V++ + Sbjct: 119 IAVTNKEIEEIYALVKERTLV 139 >ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 Length = 139 Score = 136 bits (344), Expect = 3e-31 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 26/144 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y + Sbjct: 1 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVI- 54 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 55 -EGRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVG 136 GC A+TD +I+EI + V Sbjct: 114 QGCIAVTDEEIEEIAEAAPNGTVV 137 >DUF949_Q83XL8_75-191_PF06104.2 Length = 117 Score = 134 bits (338), Expect = 1e-30 Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS 79 FK ERK+ELW E+ I YP+ +SG LGPK RE D Q PEG Y + NP S Sbjct: 1 FKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVN--FNPFS 58 Query: 80 RYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +L++ I +PN++DR GY G + IHG +SVGC A+ D ID++F R Sbjct: 59 SMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILARR 117 >gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100] Length = 209 Score = 132 bits (332), Expect = 6e-30 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 34/155 (21%) Query: 1 PVSKEL--KQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG 53 P +KE K + +P+ ++ + K+ R L + + Q++ +Y + G Sbjct: 50 PRAKEFAEKARWDHAPISQKLDFVLVDKKRRMLHVMR-----HGQVLATYAVALGGNPQG 104 Query: 54 PKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIH 107 K+ EGD ++PEG Y + S Y+L + I +PNA D A G ++IH Sbjct: 105 HKKNEGDQRTPEGRYFFDLKKAK--SEYHLGLRINYPNARDLAEAKKNGIKNPGDSILIH 162 Query: 108 G--------------ACVSVGCYAMTDAQIDEIFA 128 G + GC A+ + +I+EI+A Sbjct: 163 GLPNSWVKRKVIRHPRDWTKGCMAVRNYEIEEIYA 197 >gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 431 Score = 131 bits (329), Expect = 1e-29 Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKA--KMGGEYQLIKSYPICKWSGGLGPKRREG 59 V + L Q P I + + +L L++ K G + + Y I G K EG Sbjct: 154 VPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYITHGKLGA-EKLVEG 212 Query: 60 DFQSPEGFYSVQ---PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----- 111 D ++P G Y V P Q D A + +PN +D+ G G + +HG Sbjct: 213 DKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGGSGIWLHGTPSNTFAR 272 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 S GC +T+ +D V G V +S Sbjct: 273 PPRASDGCVVLTNQDLD----VVAKNLQVGLTPVIIS 305 >gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein conserved in bacteria [Desulfovibrio desulfuricans G20] Length = 429 Score = 130 bits (327), Expect = 2e-29 Identities = 40/180 (22%), Positives = 67/180 (37%), Gaps = 28/180 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV-- 70 P ++ + K + L L++ ++ +Y G K+ EGD ++PEG Y V Sbjct: 41 PPRFVAVDKSRQTLFLYR--HSSPLEVSATYTCTTGQA-TGDKQVEGDLRTPEGVYFVEH 97 Query: 71 -QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQI 123 L+ D +A + +PN D TG + IHG + GC A+ A I Sbjct: 98 RIDKGLDWDLYGGIAYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADI 157 Query: 124 DEIF--------AFVRDAFV--GGQPSVQVSIYPFRMTDANMQ------RHRNSPNYDFW 167 + + V G QP + R+ Q + R+ +DF+ Sbjct: 158 EVLGPGLERGLPVIVAQGVNATGAQPEAERGAATARLLAQRSQQWAAAWQARSDDFFDFY 217 >gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 124 Score = 127 bits (321), Expect = 1e-28 Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 28/127 (22%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 ++K Y + + G K++EGD ++PEG YS+ + DS +Y A++I +PNA D Sbjct: 5 TVVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYKK--EDSAFYRAMHISYPNAEDVRK 62 Query: 98 GY-----TGKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G ++M+HG + GC A+T++ +DE V+ Sbjct: 63 AKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCIALTNSDMDEFMDKVKVG----- 117 Query: 139 PSVQVSI 145 + I Sbjct: 118 --TPIEI 122 >gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 417 Score = 126 bits (317), Expect = 4e-28 Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 19/148 (12%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 P + + + +L +++ + + Y I G K EGD ++P G Y Sbjct: 150 MSPEQRYAVVVDTTKSRLYVYQ-NRDSQLHHLVDYYITMGKNG-SEKFTEGDKRTPLGIY 207 Query: 69 SVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYA 117 PD A + +PN D+ HG G + +HG S GC Sbjct: 208 IADKKLEHKLPDFYGEAAYPLNYPNPLDKRHGKKGHGIWLHGTPQDVYSRPPKASDGCVV 267 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + + I + A V Q + V I Sbjct: 268 IANPDIKAL------APVLQQGATPVII 289 >gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 223 Score = 124 bits (313), Expect = 1e-27 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 46/163 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K +R+L L + L++ YPI G K GD ++PEG + + N Sbjct: 75 IYVYKSDRRLLLVNNGV-----LVREYPIGLGFSPNGDKFMRGDGRTPEGQFFICAK--N 127 Query: 77 PDSRYYLAINIGFPNAYDRAHG----------------------YT------GKYLMIHG 108 P+SR+Y ++ + +P+ G + IHG Sbjct: 128 PNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVLGGDIFIHG 187 Query: 109 ----ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+ ++ +DE+F+ V V + P Sbjct: 188 GGAGRDWTWGCVAVRNSAMDELFSIVSVG-------TPVEVMP 223 >gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] Length = 325 Score = 119 bits (300), Expect = 3e-26 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 14/134 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + K ++ L ++ G Q + +G +G K+ EGD ++P GFY Sbjct: 61 YDDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQK--AIITGLMGDKQVEGDLKTPVGFYE 118 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + + NP YY A +PN D+ G TG + IHG + GC A+ Sbjct: 119 LG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIAL 177 Query: 119 TDAQIDEIFAFVRD 132 + ++E V+D Sbjct: 178 FNENLEEFAKVVQD 191 >gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100] Length = 332 Score = 119 bits (299), Expect = 4e-26 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 19/145 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S I + KE+RKL +++ G + Q I YP G G K + D ++PEG Y +Q Sbjct: 48 SRYVILVDKEQRKLSVFERN-GEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQE 105 Query: 73 NQ---LNPDSRYY-LAINIGFPNAYDRAHGYTGKYLMIHGACV-------SVGCYAMTDA 121 P S Y LA +PN +D+ TG + +H S GC + + Sbjct: 106 RLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRND 165 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIY 146 I ++ +++ + I+ Sbjct: 166 VIKKLADYIKLG------ETPILIF 184 >gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 415 Score = 116 bits (291), Expect = 3e-25 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 14/130 (10%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---PN 73 I + +L L+ G +LI Y I G K ++GD ++P G Y V P Sbjct: 155 IAVDLTRSRLFLF-DNREGMPKLIADYYISSGKKGA-EKIKQGDKRTPAGLYYVTEYIPG 212 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAMTDAQID 124 + PD A+ I +PN +DR H TG + +HG S GC A+T+ + Sbjct: 213 EKLPDLYGAGAMPINYPNEWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLDFE 272 Query: 125 EIFAFVRDAF 134 E+ Sbjct: 273 ELEEKTSIGT 282 >gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens DSM 15236] Length = 414 Score = 116 bits (291), Expect = 3e-25 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 19/153 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + + + I I +L L + + G LI Y + GL K EGD Sbjct: 141 LPSQFLALSARNKHAIAIDASRSRLYLLENRPTG-LTLIADYYVSIGKSGLS-KNAEGDL 198 Query: 62 QSPEGFYSVQPNQLNPDS--RYYLA--INIGFPNAYDRAHGYTGKYLMIHGAC------- 110 ++P G Y + N L+P S +Y + + I +PN D G TG + +HG Sbjct: 199 RTPMGVYFITSN-LDPKSLKDFYGSGALPINYPNVLDNLRGKTGGGIWLHGTPPGQFSRP 257 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 + GC + + + A +R V P V Sbjct: 258 PLATDGCVVLANPD---LMALIRTVEVRTTPVV 287 >gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 325 Score = 115 bits (289), Expect = 5e-25 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 14/134 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ L ++ + G + + I +G K+ EGD ++P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITG--LMGDKKIEGDLKTPVGFYE 118 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + + NP YY A +PN D+ G TG + IHG + GC A+ Sbjct: 119 LG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 119 TDAQIDEIFAFVRD 132 + +++ V+D Sbjct: 178 FNNNLEKFAKVVQD 191 >ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 Length = 137 Score = 115 bits (289), Expect = 6e-25 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 19/144 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S I + KE+RKL +++ G + Q I YP G G K + D ++PEG Y +Q Sbjct: 2 SRYVILVDKEQRKLSVFERN-GEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQE 59 Query: 73 NQ---LNPDSRYY-LAINIGFPNAYDRAHGYTGKYLMIHGACV-------SVGCYAMTDA 121 P S Y LA +PN +D+ TG + +H S GC + + Sbjct: 60 RLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRND 119 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSI 145 I ++ +++ + I Sbjct: 120 VIKKLADYIKLG------ETPILI 137 >gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted protein, putative [Campylobacter lari RM2100] Length = 323 Score = 113 bits (283), Expect = 3e-24 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 14/134 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ + ++ G + + G K EGD ++P GFY Sbjct: 60 YEENVAIVLTNKSDKIIRVYHYNDGKVEKKFIQKDVLTG--LAGDKEIEGDLKTPIGFYE 117 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + + P YY A +PN D+ G TG + IHG + GC A+ Sbjct: 118 LG-KKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAV 176 Query: 119 TDAQIDEIFAFVRD 132 + +++ V D Sbjct: 177 QNDLLEDFNKLVAD 190 >gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 224 Score = 113 bits (283), Expect = 3e-24 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 46/163 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++KE+R+L + ++ + L++ YPI G K R+GD ++PEG + + + Sbjct: 76 IFVYKEKRRLYVIQSNV-----LVRDYPIGLGPHPSGDKDRDGDGRTPEGDFFIIVKGSS 130 Query: 77 PDSRYYLAINIGFPNAYDRAHGY----------------------------TGKYLMIHG 108 + ++ I +P Y G + IH Sbjct: 131 ERLK--KSLAISYPGRGHAEKAYFSGVITPLEFRDILRAADNRSAPPSGTVLGGKIFIHA 188 Query: 109 ----ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + G A+ D+ ++E+F VSI P Sbjct: 189 GGAHKDWTDGSIALYDSDMEELFTVASVG-------TPVSIRP 224 >gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] Length = 316 Score = 110 bits (277), Expect = 2e-23 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 14/133 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + ++ K ++ L+++ G + + + +G K +EGD ++P GFY Sbjct: 52 YTQDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEVITG--LMGDKEKEGDLKTPVGFYE 109 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + + NP +YY A +PN D+ TG + IHG + GC A+ Sbjct: 110 LG-MKFNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCIAL 168 Query: 119 TDAQIDEIFAFVR 131 + ++++ V Sbjct: 169 FNDKLEDFAKIVA 181 >gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methylococcus capsulatus str. Bath] Length = 177 Score = 110 bits (276), Expect = 2e-23 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 45/167 (26%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q ++ + + L++ + ++ I G G +R D ++P G Y Sbjct: 14 QSENPDPWLLVETKPHVLKVMQGDT--PVEVFT--KIAIGQHGAGVDKRRNDNKTPLGEY 69 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG----------------------------YT 100 + +N +S+++ + +PN G Sbjct: 70 RI--GWINENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQDTPL 127 Query: 101 GKYLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 G + IHG + GC A+T+ QID++ +VR + Sbjct: 128 GGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTLV 174 >DUF949_Q83CG1_72-171_PF06104.2 Length = 100 Score = 109 bits (274), Expect = 3e-23 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 9/103 (8%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 +FK +++LW G ++ I+S+PI SGG GPK +GD Q PEG Y + NP Sbjct: 1 VFKNSHRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPA 57 Query: 79 SRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGC 115 SR+ L++ + +PN+ DR + G + IHG+ S+GC Sbjct: 58 SRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGC 100 >ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 Length = 160 Score = 106 bits (266), Expect = 3e-22 Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 45/164 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++ + + L++ + ++ I G G +R D ++P G Y + Sbjct: 1 NPDPWLLVETKPHVLKVMQGDT--PVEVFT--KIAIGQHGAGVDKRRNDNKTPLGEYRI- 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG----------------------------YTGKY 103 +N +S+++ + +PN G G Sbjct: 56 -GWINENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQDTPLGGQ 114 Query: 104 LMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 + IHG + GC A+T+ QID++ +VR + Sbjct: 115 IGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTLV 158 >gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 181 Score = 104 bits (261), Expect = 1e-21 Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 47/164 (28%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDFQSPEGFYSVQ 71 V+I I E +L + + +++ ++ + G R GD Q+P G + + Sbjct: 22 QDVWILIDTSEHRLSVMRKD-----KVLLTFDNVAIGRYGASRSRMRGDNQTPLGSFQIS 76 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGK--------YLM------------------ 105 + R+Y I +PN + +M Sbjct: 77 --WVKQHDRFYRFYGINYPNREVADLALSEGRISRQVWENIMNAIESTGLSPQDTSLGGY 134 Query: 106 ------------IHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +H + GC A+T+ QID++ +V+ Sbjct: 135 IGIHGIGKGDQAVHSRFNWTNGCVALTNVQIDQLNPWVKLGTRV 178 >gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitrosomonas europaea ATCC 19718] Length = 182 Score = 104 bits (261), Expect = 1e-21 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 45/167 (26%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 S ++I I E++L + + G+ + I G R +GD Q+P G + Sbjct: 19 SYANSDIWILIDTLEQRLSVMR----GDKAQLAFNNIAIGRYGASSSRMKGDNQTPLGSF 74 Query: 69 SVQPNQLNPDSRYYLAINIGFPN--AYDRAHGYTG------------------------- 101 + + RYY + FPN A D A Sbjct: 75 QIS--WIKQHHRYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPL 132 Query: 102 -----------KYLMIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +H + GC A+T+AQIDE+ ++++ Sbjct: 133 GGYIGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTKV 179 >gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 175 Score = 104 bits (259), Expect = 2e-21 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 23/136 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P S + + + R+L L + + G+G KRR GD ++P G Y + Sbjct: 39 PRSRDAVVVVTDRRELWLCSGG-----APAAQFTVALGRSGVG-KRRRGDGRTPLGTYPL 92 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCY 116 + +P +Y I I +P A G+TG + IHG + GC Sbjct: 93 GDPRPSP--QYGTFIPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCI 150 Query: 117 AM-TDAQIDEIFAFVR 131 A TD +D I AFVR Sbjct: 151 ATGTDGDVDAIAAFVR 166 >ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 Length = 160 Score = 102 bits (254), Expect = 6e-21 Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 45/164 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S ++I I E++L + + G+ + I G R +GD Q+P G + + Sbjct: 1 NSDIWILIDTLEQRLSVMR----GDKAQLAFNNIAIGRYGASSSRMKGDNQTPLGSFQIS 56 Query: 72 PNQLNPDSRYYLAINIGFPN--AYDRAHGYTG---------------------------- 101 + RYY + FPN A D A Sbjct: 57 --WIKQHHRYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPLGGY 114 Query: 102 --------KYLMIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +H + GC A+T+AQIDE+ ++++ Sbjct: 115 IGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTKV 158 >gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 171 Score = 102 bits (254), Expect = 8e-21 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 23/137 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P I + E +L L +A +P+ S G KR EGD ++P G Y++ Sbjct: 35 PPVDALILVDTAEHRLALCEAGAAAAV-----FPVALGSAGT-EKRAEGDRRTPLGAYAL 88 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCY 116 + P + + I IG+P A R G TG + IHG A + GC Sbjct: 89 GTPR--PSAGFGTFIPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCV 146 Query: 117 AMT-DAQIDEIFAFVRD 132 A+ D ++ + AFV Sbjct: 147 ALGSDPEVAAVAAFVER 163 >gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 100 bits (251), Expect = 1e-20 Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 45/167 (26%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 +++ I E L++++ G+ ++ + P+ GG R++G +P G + Sbjct: 26 MAADDEIWVLIDDREATLDIYR----GDTRIERFEPVSLGRGGTARVRKQGSNMTPTGEF 81 Query: 69 SVQPNQLNPDSRYYLAINIGFP-----------------------NAYDRAHGYT----- 100 + ++N +S++ + + + +P +AY R Sbjct: 82 HIN--RINRESKFNIFLGLDYPKLETAREAMRAGLMSPAEYADFQDAYYRNGAPPQDTVL 139 Query: 101 GKYLMIHGAC-----------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 G Y+ IHG + GC A+T+ QI+E+ V Sbjct: 140 GGYIGIHGLGASDPDIHRRFHWTEGCVAVTNPQIEELTRLVSIGTRV 186 >gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88] Length = 232 Score = 97.5 bits (242), Expect = 2e-19 Identities = 34/168 (20%), Positives = 58/168 (34%), Gaps = 52/168 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + + I+ YPI P SP G + + N Sbjct: 42 ILVDISEFKMYLIEKGSN---KPIRRYPIA-GGKPETP--------SPYGTWKITSKSAN 89 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P G G IHG S GC M + ++E++ Sbjct: 90 WGSGFGTRWMGLNVP------WGQYG----IHGTNKPLSINNPDSKGCIRMFNKDVEELY 139 Query: 128 AFVRDAFVGGQPSVQVSIY--PFRMTDANMQRHRNSPNYDFWKQLKPG 173 +V + V IY P+ ++ ++ ++ LKPG Sbjct: 140 KYVDVGTI-------VVIYGGPYNLS------------WNNFRTLKPG 168 >gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes] Length = 322 Score = 97.1 bits (241), Expect = 2e-19 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 12/121 (9%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 K +L L++ +L + G KR EGD ++P G Y + Sbjct: 66 YLFIADKALSELSLYQLGGKKPERLAHTK--ALMGSKKGDKRIEGDLKTPIGVYDLTAK- 122 Query: 75 LNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC-------VSVGCYAMTDAQIDE 125 L + Y LA +PN YD +G + IHG + GC A+ + + Sbjct: 123 LTRLDQLYGPLAFVTSYPNLYDSLQKKSGSGIWIHGLPLNGDREINTKGCIAIDNQLLKT 182 Query: 126 I 126 I Sbjct: 183 I 183 >gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protein [Helicobacter pylori 26695] Length = 330 Score = 96.7 bits (240), Expect = 3e-19 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 13/122 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 K + LE ++ + + I S G K EGD +P G Y Sbjct: 64 YQNKQFLFVANKSKPSLEFYEIENN-MLKKINSSK-ALVGSKKGDKTLEGDLATPIGVYR 121 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMT 119 + +L +YY LA +PN YD TG + +HG + GC A+ Sbjct: 122 IT-QKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIE 180 Query: 120 DA 121 + Sbjct: 181 NP 182 >gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis NCTC 9343] Length = 183 Score = 96.4 bits (239), Expect = 3e-19 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 25/145 (17%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---- 71 + I K+E KL L K + I G K ++GD ++PEG + + Sbjct: 43 ILLISKDEMKLRLIDYKGQELFTA----DIACGKN-YGNKEKQGDLKTPEGTFKIIDIQD 97 Query: 72 -PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVGCYAMTDAQ 122 + I + N + R K + IH G + GC + +++ Sbjct: 98 ASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 157 Query: 123 IDEIFAFVRDAFVGGQPSVQVSIYP 147 ++++ + +R V I P Sbjct: 158 LEQLVSLIRV-------PTTVIITP 175 >ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 Length = 135 Score = 96.4 bits (239), Expect = 4e-19 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 18/132 (13%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ---- 71 + I K+E KL L K + I G K ++GD ++PEG + + Sbjct: 5 ILLISKDEMKLRLIDYKGQELFTA----DIACGKN-YGNKEKQGDLKTPEGTFKIIDIQD 59 Query: 72 -PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVGCYAMTDAQ 122 + I + N + R K + IH G + GC + +++ Sbjct: 60 ASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 119 Query: 123 IDEIFAFVRDAF 134 ++++ + +R Sbjct: 120 LEQLVSLIRVPT 131 >gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [Thiomicrospira denitrificans ATCC 33889] Length = 321 Score = 94.4 bits (234), Expect = 2e-18 Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 11/115 (9%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD- 78 K L L+ ++ K Y G K +EGD ++P G Y + Sbjct: 68 DKSLSSLNLYSLDENQNFKFKKKYSAFTGKM-KGDKIKEGDLRTPTGIYQITQKLSKETK 126 Query: 79 -SRYY--LAINIGFPNAYDRAHGYTGKYLMIHGACV------SVGCYAMTDAQID 124 +Y A +PN YD G G + IHG + GC A+ ++ I+ Sbjct: 127 LDPFYGPFAFVTSYPNVYDTYKGKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIE 181 >gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 289 Score = 93.7 bits (232), Expect = 2e-18 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 42/145 (28%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 S V I + + L L++ + +L+KSYP+ P +P G +++ Sbjct: 178 APSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGK-PTTP--------TPRGTFTI 223 Query: 71 QPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDA 121 Q+NP + + + P + IHG S GC M + Sbjct: 224 INKQVNPGGPFGTRWMGLSQP------------HYGIHGTNNPASIGTAASNGCIRMYNE 271 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIY 146 ++E+F V V+IY Sbjct: 272 DVNELFNLVSVG-------TPVTIY 289 >gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5] Length = 397 Score = 92.1 bits (228), Expect = 7e-18 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 21/138 (15%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + + + P + + K + L ++K K +L YP+ +G K REGD + Sbjct: 126 APPVLVENPENHYVFLVEKMSQYLFVFKGK-----KLEGMYPVTTGMN-IGDKEREGDGK 179 Query: 63 SPEGFY----SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-------- 110 +PEG Y + P QL+ +A+ + +PN YD+ G TG + +HG+ Sbjct: 180 TPEGVYYFTRFIPPEQLSEI-YGGIAVALNYPNPYDKLLGKTGSGIWLHGSNEKDRDKLP 238 Query: 111 -VSVGC-YAMTDAQIDEI 126 + GC A TD EI Sbjct: 239 FSTRGCVVAQTDVLKTEI 256 >gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 182 Score = 92.1 bits (228), Expect = 7e-18 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 29/135 (21%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + IR+ + R++ ++ + Q++KS+PI G ++P G Y V + Sbjct: 56 ISIRVKRGARQVYVY-----QDKQVLKSFPIAIGKSGW---------ETPLGNYQVIYMK 101 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-------TGKYLMIHGAC--------VSVGCYAMT 119 NP + + NI P A + +L HG VS GC M Sbjct: 102 KNPIFKNFKTGNIIMPGANNPLGKRVIVFKIYKKSHLAFHGTNQDKLIGKAVSHGCIRML 161 Query: 120 DAQIDEIFAFVRDAF 134 + + ++ V Sbjct: 162 NKDVIALYELVNIGT 176 >gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC 14580] Length = 165 Score = 91.0 bits (225), Expect = 2e-17 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 39/134 (29%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ +L+K+YPI Q+P G + + Sbjct: 56 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVGKILT---------QTPRGEFVIVNR 101 Query: 74 QLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 Q NP Y+L++ + ++ IHG VS GC M + Sbjct: 102 QPNPGGPFGAYWLSL--------------SKQHYGIHGTNNPSSIGKAVSRGCIRMHNRD 147 Query: 123 IDEIFAFVRDAFVG 136 + E+ + V + Sbjct: 148 VLELASIVPNGTRV 161 >gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 429 Score = 91.0 bits (225), Expect = 2e-17 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 12/131 (9%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K ++ +++ L ++P G K EGD ++PEG Y ++ Sbjct: 42 PRRILAVDKNHQRFLIFE--RHSPLALRGTFPCTTGQAD-GDKVAEGDLRTPEGIYFIEG 98 Query: 73 NQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--GACV----SVGCYAMTDAQI 123 + L+ +A + +PN DR +G + IH G + + GC A+ I Sbjct: 99 KRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGDI 158 Query: 124 DEIFAFVRDAF 134 D + + Sbjct: 159 DALAGTLAPGT 169 >ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 Length = 133 Score = 90.2 bits (223), Expect = 3e-17 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 12/131 (9%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K ++ +++ L ++P G K EGD ++PEG Y ++ Sbjct: 2 PRRILAVDKNHQRFLIFE--RHSPLALRGTFPCTTGQAD-GDKVAEGDLRTPEGIYFIEG 58 Query: 73 NQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--GACV----SVGCYAMTDAQI 123 + L+ +A + +PN DR +G + IH G + + GC A+ I Sbjct: 59 KRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGDI 118 Query: 124 DEIFAFVRDAF 134 D + + Sbjct: 119 DALAGTLAPGT 129 >gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 332 Score = 90.2 bits (223), Expect = 3e-17 Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I I RKL L + +L+K YP+ +P G + V L Sbjct: 144 LIEIDVASRKLVL-----TEDGKLVKEYPVAVGKSKT---------PTPLGEWKVVHKGL 189 Query: 76 NPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEI 126 N + + + + P G G IHG S GC M + ++E+ Sbjct: 190 NWGNGFGTRWMGLNVP------WGIYG----IHGTNKPGSIGSYASHGCIRMFNRHVEEL 239 Query: 127 FAFVRDAFVG 136 + V Sbjct: 240 YPLVPAGTRV 249 >gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501] Length = 191 Score = 90.2 bits (223), Expect = 3e-17 Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 32/148 (21%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + E Q L V +ER++ +++ Q+I +Y + G Sbjct: 55 PTAPENNQTLATHVVL---NLKERRVYVYQDD-----QVIANYRVAIGRPGW-------- 98 Query: 61 FQSPEGFYSV-----QPNQLNPDSRYYLAINIGFP--NAYDRAHGYTGKYLMIHGAC--- 110 ++P+G +SV P NP + A P + GKY+ HG Sbjct: 99 -ETPKGNFSVIQMVEDPQWKNPWNGRVSAPGPNSPLGERWIGFSREGGKYIGFHGTPGEH 157 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDA 133 VS GC M + + E++ V++ Sbjct: 158 VMGQAVSHGCVRMRNRDVKELYELVQNG 185 >ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 Length = 110 Score = 89.8 bits (222), Expect = 3e-17 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 39/134 (29%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ +L+K+YPI Q+P G + + Sbjct: 3 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVGKILT---------QTPRGEFVIVNR 48 Query: 74 QLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 Q NP Y+L++ + ++ IHG VS GC M + Sbjct: 49 QPNPGGPFGAYWLSL--------------SKQHYGIHGTNNPSSIGKAVSRGCIRMHNRD 94 Query: 123 IDEIFAFVRDAFVG 136 + E+ + V + Sbjct: 95 VLELASIVPNGTRV 108 >ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 Length = 114 Score = 85.6 bits (211), Expect = 6e-16 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 31/129 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + + I+ YPI P SP G + + N Sbjct: 6 ILVDISEFKMYLIEKGSN---KPIRRYPIA-GGKPETP--------SPYGTWKITSKSAN 53 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P G G IHG S GC M + ++E++ Sbjct: 54 WGSGFGTRWMGLNVP------WGQYG----IHGTNKPLSINNPDSKGCIRMFNKDVEELY 103 Query: 128 AFVRDAFVG 136 +V + Sbjct: 104 KYVDVGTIV 112 >gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_2069 [Prosthecochloris aestuarii DSM 271] Length = 124 Score = 85.6 bits (211), Expect = 7e-16 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 LP + + K++R L L+ + ++KSY I G KR GD ++PEG Y Sbjct: 44 SLPVEADSLVVSKDDRLLHLYS-----DGAVVKSYTIALGFSPRGAKRYLGDGRTPEGRY 98 Query: 69 SVQPNQLNPDSRYYLAINIG 88 ++ NP SRY+L+++I Sbjct: 99 TII--GRNPQSRYHLSLSIS 116 >gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1] Length = 167 Score = 84.8 bits (209), Expect = 1e-15 Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 51/156 (32%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G +E ++P G++ + Sbjct: 9 ILVDLETQRLYL--------PKHQKCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGA 58 Query: 74 ---------QLNPDSRYYLA-INIGFPNAYDRAHGY-------------------TGKYL 104 P Y + + FP D +Y+ Sbjct: 59 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 117 Query: 105 MIHGACVS--------VGCYAMTDAQIDEIFAFVRD 132 IHG + GC M + + E+F V + Sbjct: 118 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPE 153 >ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 Length = 156 Score = 84.4 bits (208), Expect = 2e-15 Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 51/156 (32%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G +E ++P G++ + Sbjct: 6 ILVDLETQRLYL--------PKHQKCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGA 55 Query: 74 ---------QLNPDSRYYLA-INIGFPNAYDRAHGY-------------------TGKYL 104 P Y + + FP D +Y+ Sbjct: 56 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 114 Query: 105 MIHGACVS--------VGCYAMTDAQIDEIFAFVRD 132 IHG + GC M + + E+F V + Sbjct: 115 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPE 150 >gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens] Length = 162 Score = 84.0 bits (207), Expect = 2e-15 Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 23/130 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ++R L + K ++K++ + G+G K++ GD ++P G Y + + + Sbjct: 31 INVLTKKRILNICKNG-----TVVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCYAMT-DA 121 +++ + I I +P A GYTG+ + IHG + GC A+ + Sbjct: 85 --NQFKVFIPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKNN 142 Query: 122 QIDEIFAFVR 131 I+ + +V+ Sbjct: 143 YIEYVANWVK 152 >ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 Length = 110 Score = 83.6 bits (206), Expect = 3e-15 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 39/135 (28%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I + + L L +++K+YPI Q+P G + + Sbjct: 3 PYHIAVSIGAKTLTL-----SLNNRVMKTYPIAVGKILT---------QTPTGEFYIINR 48 Query: 74 QLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 Q NP Y+L++ + ++ IHG VS GC M + Sbjct: 49 QRNPGGPFGAYWLSL--------------SKQHYGIHGTNNPASIGKAVSKGCIRMHNKD 94 Query: 123 IDEIFAFVRDAFVGG 137 + E+ + V + Sbjct: 95 VIELASIVPNGTRVT 109 >gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 162 Score = 83.3 bits (205), Expect = 3e-15 Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 23/130 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ++R L + K ++K++ + G+G K++ GD ++P G Y + + + Sbjct: 31 INVLTKKRILNICKNG-----TVVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCYAMT-DA 121 +++ + I I +P A GY+G+ + IHG + GC A+ + Sbjct: 85 --NQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKNN 142 Query: 122 QIDEIFAFVR 131 I+ + +V+ Sbjct: 143 YIEYVANWVK 152 >gi|50085556|ref|YP_047066.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 462 Score = 81.3 bits (200), Expect = 1e-14 Identities = 35/157 (22%), Positives = 51/157 (32%), Gaps = 50/157 (31%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 ++ LP I K R+L L+ ++ Q+I S+P S D SP Sbjct: 320 VRNDLPEDIHLIIAHKGARQLYLFNSRN----QMIASFPATIGSS---------DTPSPT 366 Query: 66 GFYSVQPNQLNPDSRYY------------LAINIGFPNAYDRAHGYTGKYLMI------- 106 G Y V NP Y L++ G PNA + I Sbjct: 367 GTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSF 418 Query: 107 --HGACV--------SVGCYAMTDAQIDEIFAFVRDA 133 HG S GC +T+ +++ VR Sbjct: 419 GIHGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSG 455 >gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A Resolution Length = 164 Score = 80.2 bits (197), Expect = 3e-14 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 39/135 (28%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I + + L L ++ K+YPI Q+P G + + Sbjct: 55 PYHIAVSIGAKTLTL-----SLNNRVXKTYPIAVGKILT---------QTPTGEFYIINR 100 Query: 74 QLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 Q NP Y+L++ + + IHG VS GC + Sbjct: 101 QRNPGGPFGAYWLSL--------------SAAHYGIHGTNNPASIGKAVSKGCIRXHNKD 146 Query: 123 IDEIFAFVRDAFVGG 137 + E+ + V + Sbjct: 147 VIELASIVPNGTRVT 161 >gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426] Length = 165 Score = 80.2 bits (197), Expect = 3e-14 Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 43/149 (28%) Query: 10 LPGS---PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 LP P I I R+L L I++YPI +P G Sbjct: 49 LPPKGSIPYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVG 94 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAM 118 + + Q NP + A+ + + + IHG VS GC M Sbjct: 95 DFVIVNRQPNPGGPF-GAMWLS----------LSKVHYGIHGTNDPSSIGKYVSKGCIRM 143 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + + E+ + V + +V I P Sbjct: 144 HNKDVLELASIVPNG-------TEVFIRP 165 >ErfK_YbiS_YhnG_Q5WC42_54-163_PF03734.4 Length = 110 Score = 79.8 bits (196), Expect = 3e-14 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 35/132 (26%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + + +L L ++K YPI Q+P G + + Sbjct: 3 PYEIHVSLSQHQLTLLHNGS-----VVKIYPIAVGKMLT---------QTPTGNFVIVNK 48 Query: 74 QLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQID 124 NP + + +++ + IHG VS GC M + ++ Sbjct: 49 APNPGGPFGTMWMSLS------------KLHYGIHGTNDPSSIGKSVSHGCIRMHNKDVE 96 Query: 125 EIFAFVRDAFVG 136 E+ A V Sbjct: 97 ELAATVPIGTRV 108 >gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacillus clausii KSM-K16] Length = 165 Score = 79.4 bits (195), Expect = 4e-14 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 38/139 (27%) Query: 10 LPGS---PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 LP P I + + +L L ++K YPI Q+P G Sbjct: 49 LPNPNTIPYEIHVSLSQHQLTLLHNGS-----VVKIYPIAVGKMLT---------QTPTG 94 Query: 67 FYSVQPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYA 117 + + NP + + +++ + IHG VS GC Sbjct: 95 NFVIVNKAPNPGGPFGTMWMSLS------------KLHYGIHGTNDPSSIGKSVSHGCIR 142 Query: 118 MTDAQIDEIFAFVRDAFVG 136 M + ++E+ A V Sbjct: 143 MHNKDVEELAATVPIGTRV 161 >ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 Length = 110 Score = 79.0 bits (194), Expect = 7e-14 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 33/131 (25%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I R+L L I++YPI +P G + + Sbjct: 3 PYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVGDFVIVNR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + A+ + + + IHG VS GC M + + E Sbjct: 49 QPNPGGPF-GAMWLS----------LSKVHYGIHGTNDPSSIGKYVSKGCIRMHNKDVLE 97 Query: 126 IFAFVRDAFVG 136 + + V + Sbjct: 98 LASIVPNGTEV 108 >gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 415 Score = 79.0 bits (194), Expect = 7e-14 Identities = 34/159 (21%), Positives = 51/159 (32%), Gaps = 50/159 (31%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 ++ LP I K ++L L+ ++ Q+I S+P S D S Sbjct: 271 PNVRNDLPEDIHLIIAHKGAKQLYLFNSRN----QMIASFPATIGS---------TDTPS 317 Query: 64 PEGFYSVQPNQLNPDSRYY------------LAINIGFPNAYDRAHGYTGKYLMI----- 106 P G Y V NP Y L++ G PNA + I Sbjct: 318 PTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKK 369 Query: 107 ----HGACV--------SVGCYAMTDAQIDEIFAFVRDA 133 HG S GC +T+ +++ VR Sbjct: 370 SFGIHGTPNPSLISKTASHGCIRLTNWDANDLGNKVRSG 408 >gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermotoga maritima MSB8] Length = 395 Score = 77.9 bits (191), Expect = 1e-13 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 44/157 (28%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +PV I + KL L+ + L+K YP+ +P G Y V Sbjct: 261 ENPVTIVVNLFSSKLALYY-----DGVLLKVYPVALGRSDA----------TPPGRYWVL 305 Query: 72 PNQLNPDSRY---YLA-------INIGFPNAYDRAHGYTGKYLMIHGA--CV------SV 113 +++P + Y++ + + D + IHG S Sbjct: 306 RKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRISH 358 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG----GQPSVQVSIY 146 GC M + ++EI AF IY Sbjct: 359 GCIRMFNRDVEEIDAFAGVGTEVVVVKEDKEFPERIY 395 >gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromobacterium violaceum ATCC 12472] Length = 208 Score = 76.3 bits (187), Expect = 4e-13 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 49/160 (30%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY------- 68 ++ + + + L L ++ K + + G+G G +Q+P G++ Sbjct: 49 WVWVGVKSQTLRLL----DDWGRIQKEFTVSTAKNGVG--ETSGSYQTPRGWHAVCEKLG 102 Query: 69 -------SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------------TGKY------ 103 + Q+ P +Y +++ +PN D G Sbjct: 103 AGAEANTIIFRRQVTPW-KYTPELHVQYPNK-DWILTRILWLCGQEPGLNQGGNVDSYDR 160 Query: 104 -LMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAF 134 + IHG S+GC M + + E+F V + Sbjct: 161 AIYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNGT 200 >ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 Length = 123 Score = 75.9 bits (186), Expect = 6e-13 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 40/143 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +PV I + KL L+ + L+K YP+ +P G Y V Sbjct: 1 ENPVTIVVNLFSSKLALYY-----DGVLLKVYPVALGRSDA----------TPPGRYWVL 45 Query: 72 PNQLNPDSRY---YLA-------INIGFPNAYDRAHGYTGKYLMIHGA--CV------SV 113 +++P + Y++ + + D + IHG S Sbjct: 46 RKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRISH 98 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC M + ++EI AF Sbjct: 99 GCIRMFNRDVEEIDAFAGVGTEV 121 >ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 Length = 160 Score = 73.6 bits (180), Expect = 3e-12 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 49/160 (30%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY------- 68 ++ + + + L L ++ K + + G+G G +Q+P G++ Sbjct: 5 WVWVGVKSQTLRLL----DDWGRIQKEFTVSTAKNGVG--ETSGSYQTPRGWHAVCEKLG 58 Query: 69 -------SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------------TGKY------ 103 + Q+ P +Y +++ +PN D G Sbjct: 59 AGAEANTIIFRRQVTPW-KYTPELHVQYPNK-DWILTRILWLCGQEPGLNQGGNVDSYDR 116 Query: 104 -LMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAF 134 + IHG S+GC M + + E+F V + Sbjct: 117 AIYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNGT 156 >gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 313 Score = 73.2 bits (179), Expect = 3e-12 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 13/116 (11%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 K L+L++ K Q I + P + G G K++EGD +P G Y + L Sbjct: 52 LFVSNKSTPSLQLYQLKDSK-LQEIGNSP-ALVAKGKGNKKKEGDLTTPIGSYDLNAR-L 108 Query: 76 NPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 +YY LA + +PN YD++ TG + IHG + GC A+ + Sbjct: 109 TGLDQYYGPLAFSTNYPNVYDQSLKKTGGGIWIHGLPLNGNREDINTRGCIAIDNE 164 >gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thiobacillus denitrificans ATCC 25259] Length = 164 Score = 72.9 bits (178), Expect = 5e-12 Identities = 32/160 (20%), Positives = 52/160 (32%), Gaps = 44/160 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ++L LW+ G+ LI+ YP+ + G G + G + +P G + V ++ Sbjct: 6 IDVDIARQRLYLWERFPDGDM-LIREYPVSTAANGAG--EQSGSYCTPRGRHRV-AQKIG 61 Query: 77 PDSRYYLAI------------NIGFPNA-YDRAHGY------------TGK-------YL 104 + Y A + N D G Y+ Sbjct: 62 AGAPLYAAFKARQATGEIWTPGLDAQNPGRDWILTRILWLEGLEPGRNQGGTVDSHDRYI 121 Query: 105 MIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG S GC M +A + E+F V Sbjct: 122 YIHGTNEEHRIGTPASHGCVRMKNADVAELFELVEVGTEV 161 >gi|71674300|ref|ZP_00672047.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 219 Score = 72.5 bits (177), Expect = 5e-12 Identities = 27/141 (19%), Positives = 45/141 (31%), Gaps = 29/141 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P + + I +R++ ++K QL SYPI G ++P G + V Sbjct: 89 PNETISLVIKLSDRRVYVYKND-----QLKTSYPIAIGKEGW---------ETPTGTHKV 134 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-------TGKYLMIHGACV--------SVGC 115 NP + I P + Y+ HG S GC Sbjct: 135 IQKIPNPSWTHPFTGEIIPPGPENPLGERWIGFWTDGTNYIGFHGTPNEETVGQAASHGC 194 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 M + + ++F V + Sbjct: 195 VRMFNQDVLDLFEKVTIGTIV 215 >gi|23129994|ref|ZP_00111815.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 351 Score = 71.7 bits (175), Expect = 1e-11 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 29/133 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 + + +R+ ++ ++I SYPI G ++P G + V Sbjct: 227 VVVDLSDRRTYVYAGD-----EVIASYPIAVGKKGW---------ETPTGSFQVIHMRHY 272 Query: 74 --QLNPDSRYYLAINIGFP--NAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 +P + P + + + HG VS GC M ++ Sbjct: 273 PIWRHPITGKVFQAGTDSPLGDRWIGFWSDGRNEIGFHGTPDIDLVGTAVSHGCLRMRNS 332 Query: 122 QIDEIFAFVRDAF 134 + ++ V Sbjct: 333 DVRMLYEQVSIGT 345 >gi|67916612|ref|ZP_00510315.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 255 Score = 71.7 bits (175), Expect = 1e-11 Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 35/133 (26%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 YI I +E KL L+K + L+K+YP+ P SPEG + + Sbjct: 59 YYIYINLDELKLYLYK-----DGVLLKTYPVS-GGKPETP--------SPEGTWKIISKS 104 Query: 75 LNPDSRYYLA-INIGFPNAYDRAHGYTGKYLMIHGA---------CVSVGCYAMTDAQID 124 + + + + + P G G IHG S GC M + Sbjct: 105 -DWGGNFGGSWMGLNVP------WGQYG----IHGTKYPWYIGRQNASHGCIRMYNKNAK 153 Query: 125 EIFAFVRDAFVGG 137 E++ V + Sbjct: 154 ELYDIVPYGTIVT 166 >gi|71674299|ref|ZP_00672046.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 216 Score = 71.3 bits (174), Expect = 1e-11 Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 ++ V + + ER++ +++ + + + SYP+ G + Sbjct: 78 FQKYLGIKAEELVRVVLRIGERRVYVYEGE-----KEVASYPVAVGKPGW---------E 123 Query: 63 SPEGFYSVQ-----PNQLNPDSRYYLAINIGFPN-----AYDRAHGYTGKYLMIHGAC-- 110 +P+G + V P NP + PN + + HG Sbjct: 124 TPKGNFKVIQMVENPKWQNPW---TGEVMPAGPNTALGLRWIGFWTDGKDSIGFHGTPTV 180 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V+ Sbjct: 181 GSIGSAASHGCVRMYNEDVIKLFQKVQVGTEV 212 >gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 283 Score = 70.9 bits (173), Expect = 2e-11 Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 43/152 (28%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 K Q + I + K R+L G ++ K+YP+ + Sbjct: 83 KREGQAWEQPRISIDVVK--RRLT----YTSGSFK--KTYPVAVGKPQT---------PT 125 Query: 64 PEGFYSVQPNQLNPDSRYY-LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 P G +++ +NP + + + P IHG VS G Sbjct: 126 PLGNWTIVQKTVNPGGPFGARWMRLSVPW----------GGYGIHGTNRPSSIGKAVSHG 175 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 C M +A + E++ V+I+ Sbjct: 176 CVRMYNADVIELYDRTPLG-------TPVNIF 200 >gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synechocystis sp. PCC 6803] Length = 204 Score = 69.8 bits (170), Expect = 4e-11 Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 34/144 (23%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 Q L V + ERK+ ++ +++ SYP+ G ++P+G Sbjct: 70 QALATHIVLVL---GERKVYAYQND-----KVLASYPVAVGKKGW---------ETPQGN 112 Query: 68 YSVQ-----PNQLNPDSRYYLAINIGFPN--AYDRAHGYTGKYLMIHGAC---------- 110 + V P NP + +A ++ P + + HG Sbjct: 113 FQVIQMVENPVWENPWNGKKVAASLDGPIGIRWIGFWSDGKNTIGFHGTPKKHEHFLGTA 172 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAF 134 S GC M + + +F V++ Sbjct: 173 ASHGCVRMRNQDVVALFNMVQNGT 196 >ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 Length = 135 Score = 69.4 bits (169), Expect = 5e-11 Identities = 32/151 (21%), Positives = 47/151 (31%), Gaps = 50/151 (33%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 I K ++L L+ ++ Q+I S+P S D SP G Y V Sbjct: 1 EDIHLIIAHKGAKQLYLFNSRN----QMIASFPATIGS---------TDTPSPTGTYKVV 47 Query: 72 PNQLNPDSRYY------------LAINIGFPNAYDRAHGYTGKYLMI---------HGAC 110 NP Y L++ G PNA + I HG Sbjct: 48 GVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSFGIHGTP 99 Query: 111 V--------SVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ +++ VR Sbjct: 100 NPSLISKTASHGCIRLTNWDANDLGNKVRSG 130 >ErfK_YbiS_YhnG_Q97GF1_43-153_PF03734.4 Length = 111 Score = 69.0 bits (168), Expect = 6e-11 Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 32/130 (24%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I + ++ +++ +L+K+Y I P SP G +++ Sbjct: 4 ILIVVDVVSNRMCVFQDD-----KLLKTYTIA-GGKPSTP--------SPIGTWTIVGKD 49 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEI 126 + + P G G IHG S GC M + + E+ Sbjct: 50 TWGEGFGGRWMGFNVP------WGKYG----IHGTIFPDSIGGNTSHGCIRMRNDDVREL 99 Query: 127 FAFVRDAFVG 136 + Sbjct: 100 YKITPVGTKV 109 >gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Azoarcus sp. EbN1] Length = 162 Score = 68.2 bits (166), Expect = 1e-10 Identities = 29/158 (18%), Positives = 46/158 (29%), Gaps = 47/158 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 IRI ++L L+ G + I+ YP+ G G R G +P G + ++ Sbjct: 6 IRISIAAQRLFLF----GPDGACIRCYPVSTGEKGAGEVRDSGC--TPRGLHRIRARIGA 59 Query: 74 ----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKYL 104 + + + P D +Y+ Sbjct: 60 NAPAGAVFRGRRRTGEVWSPGLAAQHPG-RDWILSRILWLCGCEPGRNRLGDVDSMRRYI 118 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAF 134 IHG S GC M + I E+F V Sbjct: 119 YIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVGT 156 >gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Clostridium tetani E88] Length = 312 Score = 68.2 bits (166), Expect = 1e-10 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 30/134 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I K++R L ++ + ++ K YP+ + +PEG +++ Sbjct: 173 YSMVINKDKRILTVY-----LDGKVYKKYPVAAGASPSY---------TPEGKFTIVSKL 218 Query: 75 LNPDSRYYLAI-NIGFPNAYDRAHGY-------TGKYLMIHG--------ACVSVGCYAM 118 +NP I + G IHG VS+GC M Sbjct: 219 INPTWISTRTGQVISGGTPQNPLGKRWLGLSIDGGSMYGIHGSNNPWSIGTNVSLGCIRM 278 Query: 119 TDAQIDEIFAFVRD 132 + ++E+F F+ Sbjct: 279 FNNDVEELFDFIPM 292 >ErfK_YbiS_YhnG_Q55604_71-200_PF03734.4 Length = 130 Score = 67.8 bits (165), Expect = 1e-10 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 34/143 (23%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 L V + ERK+ ++ +++ SYP+ G ++P+G + Sbjct: 1 ALATHIVLVL---GERKVYAYQND-----KVLASYPVAVGKKGW---------ETPQGNF 43 Query: 69 SVQ-----PNQLNPDSRYYLAINIGFPN--AYDRAHGYTGKYLMIHGAC----------V 111 V P NP + +A ++ P + + HG Sbjct: 44 QVIQMVENPVWENPWNGKKVAASLDGPIGIRWIGFWSDGKNTIGFHGTPKKHEHFLGTAA 103 Query: 112 SVGCYAMTDAQIDEIFAFVRDAF 134 S GC M + + +F V++ Sbjct: 104 SHGCVRMRNQDVVALFNMVQNGT 126 >ErfK_YbiS_YhnG_Q5P0G8_3-160_PF03734.4 Length = 158 Score = 67.8 bits (165), Expect = 1e-10 Identities = 29/158 (18%), Positives = 46/158 (29%), Gaps = 47/158 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 IRI ++L L+ G + I+ YP+ G G R G +P G + ++ Sbjct: 4 IRISIAAQRLFLF----GPDGACIRCYPVSTGEKGAGEVRDSGC--TPRGLHRIRARIGA 57 Query: 74 ----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKYL 104 + + + P D +Y+ Sbjct: 58 NAPAGAVFRGRRRTGEVWSPGLAAQHPG-RDWILSRILWLCGCEPGRNRLGDVDSMRRYI 116 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAF 134 IHG S GC M + I E+F V Sbjct: 117 YIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVGT 154 >ErfK_YbiS_YhnG_Q895S8_170-298_PF03734.4 Length = 129 Score = 67.5 bits (164), Expect = 2e-10 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 30/134 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I K++R L ++ + ++ K YP+ + +PEG +++ Sbjct: 4 YSMVINKDKRILTVY-----LDGKVYKKYPVAAGASPSY---------TPEGKFTIVSKL 49 Query: 75 LNPDSRYYLAI-NIGFPNAYDRAHGY-------TGKYLMIHG--------ACVSVGCYAM 118 +NP I + G IHG VS+GC M Sbjct: 50 INPTWISTRTGQVISGGTPQNPLGKRWLGLSIDGGSMYGIHGSNNPWSIGTNVSLGCIRM 109 Query: 119 TDAQIDEIFAFVRD 132 + ++E+F F+ Sbjct: 110 FNNDVEELFDFIPM 123 >gi|68270035|ref|ZP_00576285.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073] Length = 332 Score = 67.1 bits (163), Expect = 3e-10 Identities = 23/149 (15%), Positives = 42/149 (28%), Gaps = 39/149 (26%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG + I I E L + + ++ + YP+ SP G + + Sbjct: 138 PGKNLKIVIDTERLVLTILV-----DGRVFQKYPVAIGKY---------TSPSPVGEWKI 183 Query: 71 QPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 + + + P IHG S GC+ M + Sbjct: 184 VDKAYESGGAFGTRWMGLNVPW----------GNYGIHGTNRPWSIGWAASAGCFRMFNE 233 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRM 150 I+ I+ ++ P+ M Sbjct: 234 DIETIYPWIPVGTPVVVKG------PYTM 256 >gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120] Length = 272 Score = 67.1 bits (163), Expect = 3e-10 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 31/134 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R+ ++ + +I SYPI G ++P G ++V + + Sbjct: 148 VVVDLSDRRTYVYAGDI-----VIASYPIAIGKRGW---------ETPTGTFNVSHMEHD 193 Query: 77 PDSRYYLAINIGFPNAYDRAHGY--------TGKYLMIHGACVSV--------GCYAMTD 120 P R+ + I FP D G + HG + GC M + Sbjct: 194 PIWRHPITGKI-FPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGTAISHGCLRMRN 252 Query: 121 AQIDEIFAFVRDAF 134 + + ++ V Sbjct: 253 SDVRLLYDQVELGT 266 >gi|15025432|gb|AAK80371.1| Uncharacterized protein, ErfK family; contains peptidoglycan-binding domain [Clostridium acetobutylicum ATCC 824] Length = 235 Score = 66.7 bits (162), Expect = 3e-10 Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 32/132 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I + ++ +++ +L+K+Y I SP G +++ Sbjct: 44 KKILIVVDVVSNRMCVFQDD-----KLLKTYTIAGGKPST---------PSPIGTWTIVG 89 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 + + P G G IHG S GC M + + Sbjct: 90 KDTWGEGFGGRWMGFNVP------WGKYG----IHGTIFPDSIGGNTSHGCIRMRNDDVR 139 Query: 125 EIFAFVRDAFVG 136 E++ Sbjct: 140 ELYKITPVGTKV 151 >gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Synechococcus elongatus PCC 6301] Length = 208 Score = 66.3 bits (161), Expect = 4e-10 Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 29/135 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R++ +++ ++ I SYP+ G ++P G + V +N Sbjct: 84 LVLSLRQRRVTVYRDRLA-----IASYPVGIGKPGW---------ETPRGTFRVMSKIVN 129 Query: 77 PD--SRYYLAINIGFPN-----AYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDA 121 P + ++ PN + + HG VS GC M + Sbjct: 130 PTWQHPWNGSLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKNR 189 Query: 122 QIDEIFAFVRDAFVG 136 I +F V + + Sbjct: 190 DIRALFELVEEGAIV 204 >gi|67928661|ref|ZP_00521848.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 182 Score = 66.3 bits (161), Expect = 4e-10 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 28/147 (19%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + Q I + +RKL + + ++++ + P SP Sbjct: 27 AQDQNTRPARRIVVSIPDRKLAVMEDD-----RVLRVFETAVG-APKSP--------SPT 72 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFP---NAYDRAH-GYTGKYLMIHGACV--------SV 113 G Y++ + +P +Y I P N G + K IHG V S Sbjct: 73 GTYTIINSIADPT--WYTKGKIVPPGKCNPLGTRWLGLSVKGYGIHGTNVPSSIGRNASH 130 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC M + ++E+F V Sbjct: 131 GCIRMRNRDVEELFKMVAVGDQVELRG 157 >gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legionella pneumophila str. Lens] Length = 162 Score = 65.5 bits (159), Expect = 7e-10 Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 48/161 (29%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----- 70 +I I +++++ ++ LI +Y I G+G K G +P G++ + Sbjct: 7 FIFISIKKQEMNCFEKDH-----LIANYAISSGKNGVGEKINSGC--TPRGWHKIHSILG 59 Query: 71 -------QPNQLNPDSRYYL-AINIGFPNAYDRAHGY------------TGK-------Y 103 Y ++ FP D G Y Sbjct: 60 IDLPINSVMVAREWTGEIYSESLATQFP-ERDWILTRIIQLDGLEPGRNKGGDVDTLYRY 118 Query: 104 LMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVG 136 + IHG + GC + + I E+ A+ + Sbjct: 119 IYIHGTPDTTQLGIPGSHGCIRLNNDAIIELAAWATKNTLV 159 >ErfK_YbiS_YhnG_Q8YS14_144-270_PF03734.4 Length = 127 Score = 65.5 bits (159), Expect = 7e-10 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 31/134 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R+ ++ + +I SYPI G ++P G ++V + + Sbjct: 5 VVVDLSDRRTYVYAGDI-----VIASYPIAIGKRGW---------ETPTGTFNVSHMEHD 50 Query: 77 PDSRYYLAINIGFPNAYDRAHGY--------TGKYLMIHGACVSV--------GCYAMTD 120 P R+ + I FP D G + HG + GC M + Sbjct: 51 PIWRHPITGKI-FPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGTAISHGCLRMRN 109 Query: 121 AQIDEIFAFVRDAF 134 + + ++ V Sbjct: 110 SDVRLLYDQVELGT 123 >gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psychrobacter arcticum 273-4] Length = 173 Score = 65.5 bits (159), Expect = 8e-10 Identities = 31/173 (17%), Positives = 50/173 (28%), Gaps = 57/173 (32%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I I ++ L ++K + ++I YP+ G+G ++ G +P G + + Sbjct: 11 IVISIAQQTLTVYKRQ-----KVIAQYPVSTAKNGMGSQQDSGC--TPLGKHVIAEKIGA 63 Query: 74 ---------QLNPDSR-YYLAINIGFPNAYDRAHGY-----------------TGK---- 102 P Y + P D G Sbjct: 64 GMLSNAVFIGRVPTGETYNSELGASHP-ERDWILSRILWLSGLEEGVNKGSNSQGGCDTY 122 Query: 103 --YLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 Y+ IHG S GC M + I E+F V V+I Sbjct: 123 QRYIYIHGTPDSEPMGIPLSHGCVRMRNQDIIELFEQVDV-----DKGTPVNI 170 >gi|71363427|ref|ZP_00654071.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 171 Score = 64.8 bits (157), Expect = 1e-09 Identities = 28/162 (17%), Positives = 49/162 (30%), Gaps = 52/162 (32%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I I ++ L +++ + ++I YPI G+G ++ G +P G + + Sbjct: 11 IVISIAQQTLTVYRRQ-----KVIAEYPISTAKNGIGSQQDSGC--TPLGQHIIAEKIGG 63 Query: 74 ---------QLNPDSRYYLAINIGFPNA-YDRAHGY-----------------------T 100 Y A +G N D Sbjct: 64 NAPSHTVFIGRIATGEIYNA-ELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTY 122 Query: 101 GKYLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAF 134 +Y+ IHG S GC M + I E+F + + Sbjct: 123 HRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEGT 164 >gi|71548935|ref|ZP_00669159.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 159 Score = 64.4 bits (156), Expect = 2e-09 Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 47/162 (29%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + I + +++ L +++ YPI G G ++ G F +P G + ++ Sbjct: 1 MKIIVDISLQQMTL----QDVTGHIVRCYPISSAKNGTG--QQRGSFHTPLGKHIIRAKI 54 Query: 74 -----------QLNPDSRYYLA-INIGFPNAYDRAHGY-------------------TGK 102 + P Y + + PN D + Sbjct: 55 GQNVPVNTVFVRRRPTGEIYTSELAANHPN-RDWILTRILWLSGCEPGFNRLGSVDTMRR 113 Query: 103 YLMIHGACVSV--------GCYAMTDAQIDEIFAFVRDAFVG 136 Y+ IHG+ S GC M + + ++F V + Sbjct: 114 YIYIHGSPDSAEMGKPGSIGCIRMHNHDLLDLFERVSVGTLV 155 >gi|68205981|ref|ZP_00558177.1| ErfK/YbiS/YcfS/YnhG [Desulfitobacterium hafniense DCB-2] Length = 115 Score = 63.2 bits (153), Expect = 4e-09 Identities = 23/128 (17%), Positives = 37/128 (28%), Gaps = 42/128 (32%) Query: 27 ELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRY-YLAI 85 EL+ QL+ YP +P G Y+V +NP + + Sbjct: 19 ELYDGN-----QLLACYPCAVGKSST---------PTPLGNYAVATKVMNPGGAFGTRWL 64 Query: 86 NIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 + P IHG S+GC M + ++ ++ V Sbjct: 65 GLSLP------------DYGIHGTNKPASIGTQASLGCIRMHNHHVEALYDQVGAG---- 108 Query: 138 QPSVQVSI 145 V I Sbjct: 109 ---TPVII 113 >ErfK_YbiS_YhnG_Q5N3Q0_79-206_PF03734.4 Length = 128 Score = 62.8 bits (152), Expect = 4e-09 Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 29/135 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R++ +++ ++ I SYP+ G ++P G + V +N Sbjct: 6 LVLSLRQRRVTVYRDRLA-----IASYPVGIGKPGW---------ETPRGTFRVMSKIVN 51 Query: 77 PD--SRYYLAINIGFPN-----AYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDA 121 P + ++ PN + + HG VS GC M + Sbjct: 52 PTWQHPWNGSLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKNR 111 Query: 122 QIDEIFAFVRDAFVG 136 I +F V + + Sbjct: 112 DIRALFELVEEGAIV 126 >gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 300 Score = 62.5 bits (151), Expect = 6e-09 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 36/152 (23%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P + + E L L+ GG +++ S+P+ S G ++P G Y V Sbjct: 102 PGRLVVNLSE--LRLYFVPEGGTPRIV-SFPVGTGSEG---------KETPLGVYRVTEK 149 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTG--------------KYLMIHGAC--------V 111 + NP +++ ++I A G LMIHG V Sbjct: 150 RANP--AWHVPLSIRQERPRLPAVVPPGPDNPLGSHALRLTDDGLMIHGTNRPWGVGRNV 207 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 S GC + I +F V V Sbjct: 208 SHGCIRLYPEDIPVLFRLVSLGTPVAIVREPV 239 >gi|68234377|ref|ZP_00573460.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 393 Score = 62.5 bits (151), Expect = 6e-09 Identities = 27/144 (18%), Positives = 44/144 (30%), Gaps = 34/144 (23%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP- 72 P I + + KL L+ ++I + + D +P G + + Sbjct: 270 PYRIVVARGAHKLRLYSND-----KMIAEESVAIGT---------TDTPTPGGRFFLMEL 315 Query: 73 -NQLNPDSRYYL-AINIG-FPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 NP Y A + F + D G + IHG VS GC +++ Sbjct: 316 LKPSNPGGPYGPYAFGLSGFSTSLDSFGGRD-PVIGIHGTNEPGSIGRDVSHGCIRLSND 374 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSI 145 I + V V I Sbjct: 375 AITRLAQTVPLG-------TPVEI 391 >ErfK_YbiS_YhnG_Q5ZV58_5-145_PF03734.4 Length = 141 Score = 62.1 bits (150), Expect = 8e-09 Identities = 24/138 (17%), Positives = 39/138 (28%), Gaps = 43/138 (31%) Query: 39 LIKSYPICKWSGGLGPKRREGDFQSPEGFYSV------------QPNQLNPDSRYYL-AI 85 LI +Y I G+G K G +P G++ + Y ++ Sbjct: 5 LIANYAISSGKNGVGEKINSGC--TPRGWHKIYSILGIDLPINSVMVAREWTGEIYSESL 62 Query: 86 NIGFPNAYDRAHGY------------TGK-------YLMIHGACVS--------VGCYAM 118 FP D G Y+ IHG + GC + Sbjct: 63 ATQFP-ERDWILTRVLQLDGLEPGRNKGGDVDTLHRYIYIHGTPDTTQLGIPGSHGCIRL 121 Query: 119 TDAQIDEIFAFVRDAFVG 136 + I E+ A+ + Sbjct: 122 NNDAIIELAAWATKNTLV 139 >gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Bacillus subtilis subsp. subtilis str. 168] Length = 176 Score = 62.1 bits (150), Expect = 9e-09 Identities = 36/153 (23%), Positives = 52/153 (33%), Gaps = 35/153 (22%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ + LPG P I + K +L + ++ Y + D Sbjct: 14 PIWPLGENPLPGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGK---------TD 58 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINI--GFP-NAYDR------AHGYTGKYLMIHGAC- 110 +PEG +SV NP YY NI G P N A G G+ IHG Sbjct: 59 DLTPEGEFSVTVKAENP---YYRKKNIEGGSPDNPLGARWIGFDAKGTDGRIYGIHGTNR 115 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + ++ +F + Sbjct: 116 EESVGKFVSNGCIRMHNDEVVHLFQTIPVGTRV 148 >gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobacillus kaustophilus HTA426] Length = 168 Score = 62.1 bits (150), Expect = 9e-09 Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 41/153 (26%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + E K + + K KL L + + ++ YP+ D Sbjct: 20 PTAAEAK-------PLVIVNKAINKLALVR-----DGRIEAVYPVATGVN--------AD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINI--GFPN-------AYDRAHGYTGKYLMIHGAC- 110 +PEG ++V P YY NI G PN A G G+ IHG Sbjct: 60 L-TPEGMFTVTVKAKYP---YYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNN 115 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + ++ ++ V Sbjct: 116 PASIGQYVSQGCVRMHNRDVEHLYERVPIGANV 148 >gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 230 Score = 61.7 bits (149), Expect = 1e-08 Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 35/136 (25%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PV + + ER L +++ + ++ ++Y I P P G ++V Sbjct: 119 APPPVTVNVNVAERTLTVYR-----DGRIYRTYRIAL-ENPASP--------IPRGTFTV 164 Query: 71 QPNQLNPDSRYY-LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 Q++P I + IHG + M++ Sbjct: 165 LNKQVDPGVEMGARWIGLS------------EAGFGIHGTNTPEFIDVVSTGNSIVMSNE 212 Query: 122 QIDEIFAFVRDAFVGG 137 + E+F V + Sbjct: 213 DVSELFNLVPVGTIVT 228 >ErfK_YbiS_YhnG_Q606Y7_79-237_PF03734.4 Length = 159 Score = 61.3 bits (148), Expect = 1e-08 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 54/165 (32%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++LEL +A +++ Y + G+G KR G +P G++ V+ Sbjct: 4 DFLHISVPRQRLELIEAG-----KVVAHYRVSTAKNGVGEKR--GSECTPRGWHRVRAKI 56 Query: 74 -----------QLNPDSRYY------------------LAINIGFP--NAY---DRAHGY 99 P Y L + P N Y D A Sbjct: 57 GAGLPAGAVLVGRRPTGEIYTPLLAARHPGRDWILSRILWLGGLQPGFNRYGEVDTAW-- 114 Query: 100 TGKYLMIH--------GACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +Y+ IH G S GC +T A + ++F V + Sbjct: 115 --RYIYIHGSPDDGVDGTPQSHGCIRLTSADVIDLFDRVPVGALV 157 >gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 160 Score = 61.3 bits (148), Expect = 1e-08 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 47/157 (29%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + +++ + + + + YP+ G+G G +Q+P G + ++ Sbjct: 1 MKLQVSVARQLMSVI----DDAGTTLHEYPVSTALAGVG--EVSGSYQTPRGRHIIRAKI 54 Query: 74 -----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGK 102 + P + + FP+ D + Sbjct: 55 GGGLPENAVFVRRRPTGEIWTPELGEQFPD-RDWILTRILWLSGCEPGCNRLGCVDTMRR 113 Query: 103 YLMIHGACVS--------VGCYAMTDAQIDEIFAFVR 131 Y+ IHG S GC M +A I E+F V Sbjct: 114 YIYIHGCPDSSEIGSPGSHGCIRMRNADIVELFDLVP 150 >gi|66857904|ref|ZP_00401942.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C] Length = 285 Score = 61.3 bits (148), Expect = 1e-08 Identities = 30/167 (17%), Positives = 47/167 (28%), Gaps = 35/167 (20%) Query: 1 PVSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P+ LP S P I + E +L L +YP+ Sbjct: 70 PLVVPAAWILPPSAAPGSIVVNLSEMRLYLLPGGGAAPV----TYPVGIGKDRA------ 119 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR------------AHGYTGKYLMI 106 ++P G ++V + P ++ P DR A + ++I Sbjct: 120 ---KTPLGSFTVIGKTVAPTWYPPASMRRDDPTLPDRVPPGPDNPLGTHALRLSAGSILI 176 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 HG S GC + I +F V V I Sbjct: 177 HGTDEPFGIGRKFSHGCVRLYPEDIPRLFEVVPLKTPVRMVREPVKI 223 >gi|68174074|ref|ZP_00547345.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 231 Score = 60.5 bits (146), Expect = 2e-08 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 31/137 (22%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +P + + + +L+++ I P+ + D +P G + + Sbjct: 106 ETPYRLVVSRSRHRLQVFSNGTQ-----IAEEPVGIGTA---------DTPTPGGRFYLM 151 Query: 72 P--NQLNPDSRYYL-AINIGFPNAYDRAHGYTGKY---LMIHGAC--------VSVGCYA 117 +P+ Y A + N + + G + + +HG VS GC Sbjct: 152 ELLKPRDPNGPYGPYAFGL---NGFSTSLSSFGGHKPVIGVHGTNEPKLIGKDVSHGCIR 208 Query: 118 MTDAQIDEIFAFVRDAF 134 +++ I + V Sbjct: 209 LSNDAITRLAQTVPLGT 225 >gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 160 Score = 60.5 bits (146), Expect = 2e-08 Identities = 26/140 (18%), Positives = 41/140 (29%), Gaps = 43/140 (30%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV------------QPNQLNPDSR-YYL 83 L+K YP+ G G ++ + +P G + V P + Sbjct: 19 GHLLKEYPVSTALNGPG--EQKDSYCTPRGRHIVRAKIGAGQPLGAVFRGRRPTGEVWTP 76 Query: 84 AINIGFPNAYDRAHGY--------TG-----------KYLMIHGACV--------SVGCY 116 A++ P D G +Y+ IHG S GC Sbjct: 77 ALHAQHPG-RDWILTRILWLSGCEPGFNRLGNVDSMQRYIYIHGTPECEPMGEAHSHGCI 135 Query: 117 AMTDAQIDEIFAFVRDAFVG 136 M +A + E+F V Sbjct: 136 RMRNADVRELFDLVPVNTQV 155 >ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 Length = 127 Score = 60.1 bits (145), Expect = 3e-08 Identities = 34/143 (23%), Positives = 48/143 (33%), Gaps = 35/143 (24%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG P I + K +L + ++ Y + D +PEG +SV Sbjct: 1 PGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGK---------TDDLTPEGEFSV 45 Query: 71 QPNQLNPDSRYYLAINI--GFP-NAYDR------AHGYTGKYLMIHGAC--------VSV 113 NP YY NI G P N A G G+ IHG VS Sbjct: 46 TVKAENP---YYRKKNIEGGSPDNPLGARWIGFDAKGTDGRIYGIHGTNREESVGKFVSN 102 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC M + ++ +F + Sbjct: 103 GCIRMHNDEVVHLFQTIPVGTRV 125 >gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666] Length = 176 Score = 59.8 bits (144), Expect = 4e-08 Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 53/174 (30%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + I + ++ L L+ + L+++YP+ G G EG +P G + ++ Sbjct: 4 IRILVSLHDQALRLYCGGV-----LVRAYPVSTARNGPG--ELEGSACTPRGAHVIRAKI 56 Query: 74 -----------QLNPDSRYYLAINIGFPNA-YDRAHGY--------TGK----------- 102 P + + + N D GK Sbjct: 57 GAGCEAGTVFVARRPTGEMF-SAGLAEANPDRDWILTRILWLCGREPGKNRFGAVDTMRR 115 Query: 103 YLMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 Y+ IHG +S+GC M +A I E+F V V + P Sbjct: 116 YIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGT-----EVWIQAGPA 164 >gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesorhizobium loti MAFF303099] Length = 426 Score = 59.4 bits (143), Expect = 5e-08 Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 23/141 (16%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK--RREGDFQS-PEGFYSV 70 P I I R+L L + + + Y I GL K GD Q P ++ Sbjct: 288 PGTIVIDTSARRLYLVE-----SFSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIPTL 342 Query: 71 QPNQLNPD--SRYYLAINIGFPNAYDRAH-----GYTGKYLMIHGA--------CVSVGC 115 + P +Y + G N G +L IHG S GC Sbjct: 343 DMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASNGC 402 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 + M + + ++++ VR Sbjct: 403 FRMINEHVMDLYSRVRVGTKV 423 >gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methylococcus capsulatus str. Bath] Length = 241 Score = 59.4 bits (143), Expect = 5e-08 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 54/165 (32%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++LEL +A +++ Y + G+G KR G +P G++ V+ Sbjct: 82 DFLHISVPRQRLELIEAG-----KVVAHYRVSTAKNGVGEKR--GSECTPRGWHRVRAKI 134 Query: 74 -----------QLNPDSRYY------------------LAINIGFP--NAY---DRAHGY 99 P Y L + P N Y D A Sbjct: 135 GAGLPAGAVLVGRRPTGEIYTPLLAARHPGRDWILSRILWLGGLQPGFNRYGEVDTAW-- 192 Query: 100 TGKYLMIH--------GACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +Y+ IH G S GC +T A + ++F V + Sbjct: 193 --RYIYIHGSPDDGVDGTPQSHGCIRLTSADVIDLFDRVPVGALV 235 >gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 321 Score = 59.0 bits (142), Expect = 7e-08 Identities = 32/156 (20%), Positives = 47/156 (30%), Gaps = 39/156 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ + YPI G GD +P ++ + N Sbjct: 104 IVINLAELRLYYYQPGKN----TVTVYPIGIGQLG-------GDTLTPTMVTTISDKRAN 152 Query: 77 PD-------SRYYLAINIGFP------------NAYDRAHGYTGKYLMIHGAC------- 110 P Y A I P + R Y G YL +HG Sbjct: 153 PTWTPTANIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYL-LHGTNADFGIGM 211 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 VS GC + D I+ +F V + + Sbjct: 212 RVSSGCIRLRDGDIETLFRQVTPGTKVNIINTPIKA 247 >gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 253 Score = 59.0 bits (142), Expect = 7e-08 Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 34/157 (21%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + I + +L ++ K++P+ +PEG Sbjct: 17 SAFANTDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGN 62 Query: 68 YSVQPNQLNPDSRYYLA-INIGFPN--AYDRAHGYTGKYLMIHGAC--VS------VGCY 116 + + N Y+ I G PN R G IHG + GC Sbjct: 63 FCIITKFKNK--EYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCI 120 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 M D I ++ V Q +V I F + Sbjct: 121 RMHDRDIQWLYDRV-------QLQTKVIISRFHTSPE 150 >gi|67675669|ref|ZP_00472424.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 405 Score = 58.6 bits (141), Expect = 8e-08 Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 33/150 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + E +L + + GE Q +++Y I +P G + Q N Sbjct: 158 VVVNIPEMRLYYYPPRKEGEPQRVETYAISVGRMDWS---------TPLGETRITAKQEN 208 Query: 77 P-----------DSRYYLAINIGFP----NAYDRAHGYTG-KYLMIHGAC--------VS 112 P + + P N + G +IHG V+ Sbjct: 209 PPWYPPQSIIEEHAADGRELPDVVPPGPDNPLGKYKMRLGLPGYLIHGTNRPQGVGMRVT 268 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 GC M ++ +F + S Sbjct: 269 HGCIRMFPEDVEHLFGQLPVGTKVNLVSEP 298 >ErfK_YbiS_YhnG_Q5KXE9_24-150_PF03734.4 Length = 127 Score = 58.6 bits (141), Expect = 1e-07 Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 34/138 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + K KL L + + ++ YP+ D +PEG ++V Sbjct: 5 LVIVNKAINKLALVR-----DGRIEAVYPVATGVN--------ADL-TPEGMFTVTVKAK 50 Query: 76 NPDSRYYLAINI--GFPN-------AYDRAHGYTGKYLMIHGAC--------VSVGCYAM 118 P YY NI G PN A G G+ IHG VS GC M Sbjct: 51 YP---YYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQYVSQGCVRM 107 Query: 119 TDAQIDEIFAFVRDAFVG 136 + ++ ++ V Sbjct: 108 HNRDVEHLYERVPIGANV 125 >gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 172 Score = 58.2 bits (140), Expect = 1e-07 Identities = 30/145 (20%), Positives = 46/145 (31%), Gaps = 17/145 (11%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 E+ + +P I + +ER+L L YP+ G G E Sbjct: 26 RPDEVSYRSDYAPGTILVKTKERRLYLIVDSDRAI-----RYPVGVGKAGKQWAGTAHIE 80 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAIN-IGFPNAYDRAHGYTGKYLMIHGAC------- 110 G ++ P + + NP +A P G IHG Sbjct: 81 GKYRDPAWAPPAEVKRDNPRIPDVIAGGSPSNPMGVAAMTLSGGGQYAIHGTNRPQTVGH 140 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC M + ID+++ V Sbjct: 141 FVSYGCIRMYNNDIDDLYRRVSIGT 165 >gi|28275296|ref|NP_783551.1| hypothetical protein SO4656.3 [Shewanella oneidensis MR-1] Length = 67 Score = 58.2 bits (140), Expect = 1e-07 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 21/60 (35%) Query: 100 TGKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 G +MIHG + GC A+T++++DEI+ V V + I Sbjct: 13 PGGLIMIHGQHNGLGWLSFASQFFNWTNGCIAVTNSEMDEIWQAVDVG-------VPIEI 65 >gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 219 Score = 58.2 bits (140), Expect = 1e-07 Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 34/146 (23%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 P + + R++ + + + + + +P+ +P G Sbjct: 83 SASPEISTKVVLLLGRREISVIR-----DGEKLGPWPVAIGDPRT---------PTPTGV 128 Query: 68 YSVQPNQLNPDSRYYLA------INIGFPNAYDRAHG--YTGKYLM-IHGACV------- 111 + V+ +NP + + I + P DR G +G+ IHG Sbjct: 129 FKVENKVINPQYQSTKSGRVNPAIGVASP-LGDRWIGFLQSGQNQFGIHGTPWPYWVNAK 187 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAF 134 + GC M A + ++F V Sbjct: 188 AAVTNGCVRMLHAHVRQLFDVVEVGT 213 >gi|26247257|ref|NP_753297.1| Hypothetical protein ycfS precursor [Escherichia coli CFT073] Length = 377 Score = 57.8 bits (139), Expect = 1e-07 Identities = 34/156 (21%), Positives = 47/156 (30%), Gaps = 39/156 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + + YPI G GD +P +V + N Sbjct: 161 IVINIAELRLYYYPPGKNS----VTVYPIGIGQLG-------GDTLTPTMVTTVSDKRAN 209 Query: 77 PD-------SRYYLAINIGFP------------NAYDRAHGYTGKYLMIHGAC------- 110 P Y A I P + R Y G YL +HG Sbjct: 210 PTWTPTANIRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYL-LHGTNADFGIGM 268 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 VS GC + D I +F+ V + + I Sbjct: 269 RVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKI 304 >gi|71367451|ref|ZP_00657976.1| similar to Uncharacterized protein conserved in bacteria [Nocardioides sp. JS614] Length = 243 Score = 57.8 bits (139), Expect = 2e-07 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 16/89 (17%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV--------------QPNQ 74 W+ G + + + G G K+REGD +SP G Y + + Sbjct: 79 WERDGDGHWSKAREFRSTIGLRGWG-KQREGDNRSPVGVYRIKVTFTTGSENPGEMPWRR 137 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKY 103 P S + + N + A G T Sbjct: 138 RRPTSVVSSSAGPNY-NTWLEARGVTSGD 165 >gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens] Length = 244 Score = 57.4 bits (138), Expect = 2e-07 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 37/152 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + ++ +YP+ G ++P G + ++N Sbjct: 99 VVINLAEYRLYYFPPDDN----VVMTYPVGIGKKGW---------ETPLGLSRIISKEIN 145 Query: 77 PDSRYYL-------AINIGFPNAYDRA-HGYTGKY--------LMIHGAC--------VS 112 P R + +I P+ + H G++ ++IHG+ VS Sbjct: 146 PTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQHVLRLGWPAILIHGSNRVDGIGAKVS 205 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 GC M I+ +++ V + + Sbjct: 206 AGCIRMLPDDIEHLYSLVSVGTPVRIINAPLQ 237 >gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 186 Score = 57.4 bits (138), Expect = 2e-07 Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 34/138 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + K KL + ++ K +P+ K E +PEG + + Sbjct: 29 FIIVNKATNKLAYID-----DGKIQKVFPVATG------KTNEL---TPEGTFDIVMKAK 74 Query: 76 NPDSRYYLA--INIGFP-NAYDR------AHGYTGKYLMIHGAC--------VSVGCYAM 118 +P YY+A I G P N A G G IHG +S GC M Sbjct: 75 DP---YYIAKDIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRM 131 Query: 119 TDAQIDEIFAFVRDAFVG 136 ++ +F + Sbjct: 132 KKNDVEYLFDRIPIGTKV 149 >ErfK_YbiS_YhnG_Q73D94_22-142_PF03734.4 Length = 121 Score = 57.1 bits (137), Expect = 3e-07 Identities = 24/134 (17%), Positives = 39/134 (29%), Gaps = 27/134 (20%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I + +L ++ K++P+ +PEG + + Sbjct: 2 DHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGNFCIITK 47 Query: 74 QLNPDSRYYLA-INIGFPN--AYDRAHGYTGKYLMIHGAC--VS------VGCYAMTDAQ 122 N Y+ I G PN R G IHG + GC M D Sbjct: 48 FKNK--EYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRD 105 Query: 123 IDEIFAFVRDAFVG 136 I ++ V+ Sbjct: 106 IQWLYDRVQLQTKV 119 >gi|67676061|ref|ZP_00472813.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 173 Score = 56.7 bits (136), Expect = 3e-07 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 48/159 (30%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----- 70 ++ I + L +W+A E ++ I + G+G ++EG Q+P G++ V Sbjct: 17 WLEIDLGAQSLTVWEADERRE-----TFAISSGARGIG--QQEGSGQTPVGWHYVRAAIG 69 Query: 71 -------QPNQLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 P + + +P D +Y Sbjct: 70 DGLPRGSVFRGRRPTGEVFSPDLARQYP-ERDWILTRILWLCGLERGVNRGGDVDSQRRY 128 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAF 134 + +HG S GC + DA + +FA Sbjct: 129 IYLHGTPDDQPMGVPASHGCIRLRDAALLSVFAAAPPGT 167 >gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 253 Score = 56.7 bits (136), Expect = 3e-07 Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 34/157 (21%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + I + +L ++ K++P+ +PEG Sbjct: 17 SAFADTDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGN 62 Query: 68 YSVQPNQLNPDSRYYLA-INIGFPN--AYDRAHGYTGKYLMIHGAC--VS------VGCY 116 + + N Y+ I G PN R G IHG + GC Sbjct: 63 FCIITKFKNK--EYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCI 120 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 M D I ++ V Q +V I F + Sbjct: 121 RMHDRDIQWLYDRV-------QLQTKVIISRFHTSPE 150 >gi|29654387|ref|NP_820079.1| hypothetical protein CBU1080 [Coxiella burnetii RSA 493] Length = 160 Score = 56.7 bits (136), Expect = 3e-07 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 48/158 (30%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN----- 73 + + L L++ Q+IK Y + G G ++P G++ ++ Sbjct: 7 VDIPSQTLTLFRDN-----QVIKRYRVSTARNGPGELI--NSEKTPRGWHIIRAKVGEGC 59 Query: 74 -------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKYLMI 106 + P Y A+ +P+ D +Y+ I Sbjct: 60 PPNTVFVERRPTGEVYSPALKRRYPD-RDWVLTRILWLSGLEVGKNRLGNVDTMRRYVYI 118 Query: 107 HG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 HG S GC M + I E+F V Sbjct: 119 HGSGDEIIMGKPGSRGCIRMHNHDIIELFDEVCAGDRV 156 >gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Bradyrhizobium japonicum USDA 110] Length = 353 Score = 56.7 bits (136), Expect = 4e-07 Identities = 27/152 (17%), Positives = 41/152 (26%), Gaps = 35/152 (23%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + P + + K + ++L+ LI YP S D SP Sbjct: 206 SAGEGAPAKADRVEVDKVRQTVKLFDKSN----ALIGFYPATVGSE---------DKPSP 252 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG--------------KYLMIHGAC 110 G V NP RY A + + G + IHG Sbjct: 253 SGTLKVTEVSKNPLYRYNPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAEGYGIHGTP 312 Query: 111 V--------SVGCYAMTDAQIDEIFAFVRDAF 134 S GC +T+ + + V Sbjct: 313 SPDKISKAESHGCVRLTNWDAERVAGSVAKGT 344 >ErfK_YbiS_YhnG_Q83CN1_2-158_PF03734.4 Length = 157 Score = 56.7 bits (136), Expect = 4e-07 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 48/158 (30%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN----- 73 + + L L++ Q+IK Y + G G ++P G++ ++ Sbjct: 6 VDIPSQTLTLFRDN-----QVIKRYRVSTARNGPGELI--NSEKTPRGWHIIRAKVGEGC 58 Query: 74 -------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKYLMI 106 + P Y A+ +P+ D +Y+ I Sbjct: 59 PPNTVFVERRPTGEVYSPALKRRYPD-RDWVLTRILWLSGLEVGKNRLGNVDTMRRYVYI 117 Query: 107 HG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 HG S GC M + I E+F V Sbjct: 118 HGSGDEIIMGKPGSRGCIRMHNHDIIELFDEVCAGDRV 155 >gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099] Length = 505 Score = 56.7 bits (136), Expect = 4e-07 Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 39/145 (26%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K ++++ + A +L+ +YP S D SP G ++V Sbjct: 359 PVARIVADKTKKEVYAYDA----SGKLVAAYPATIGSA---------DTPSPTGIHAVSR 405 Query: 73 NQLNPDSRYYLAINIGFPN-AYDRAH----GYTG--KYLMI---------HGACV----- 111 L+P+ Y NI F D+ G G + I HG Sbjct: 406 IALDPNYTYNP--NINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIG 463 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ E+ V Sbjct: 464 KTESHGCVRLTNWDARELAKLVSPG 488 >ErfK_YbiS_YhnG_Q8FYK9_271-406_PF03734.4 Length = 136 Score = 56.3 bits (135), Expect = 4e-07 Identities = 27/143 (18%), Positives = 41/143 (28%), Gaps = 35/143 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K +++ +L+ +YP S D SP G V+ Sbjct: 2 KVARIIADKGRKQV----RGYDENGKLVVAYPSTIGSS---------DNPSPSGIVQVER 48 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGAC-------- 110 +NP+ Y IN N G IHG Sbjct: 49 IAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGIHGTPAPSRIGKT 108 Query: 111 VSVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ +E+ V+ Sbjct: 109 SSHGCVRLTNWDAEELAKLVKPG 131 >ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 Length = 140 Score = 56.3 bits (135), Expect = 4e-07 Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 23/141 (16%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK--RREGDFQS-PEGFYSV 70 P I I R+L L + + + Y I GL K GD Q P ++ Sbjct: 3 PGTIVIDTSARRLYLVE-----SFSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIPTL 57 Query: 71 QPNQLNPD--SRYYLAINIGFPNAYDRAH-----GYTGKYLMIHGA--------CVSVGC 115 + P +Y + G N G +L IHG S GC Sbjct: 58 DMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASNGC 117 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 + M + + ++++ VR Sbjct: 118 FRMINEHVMDLYSRVRVGTKV 138 >gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [Brucella abortus biovar 1 str. 9-941] Length = 408 Score = 56.3 bits (135), Expect = 5e-07 Identities = 27/143 (18%), Positives = 41/143 (28%), Gaps = 35/143 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K +++ +L+ +YP S D SP G V+ Sbjct: 272 KVARIIADKGRKQV----RGYDENGKLVVAYPSTIGSS---------DNPSPSGIVQVER 318 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGAC-------- 110 +NP+ Y IN N G IHG Sbjct: 319 IAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGIHGTPAPSRIGKI 378 Query: 111 VSVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ +E+ V+ Sbjct: 379 SSHGCVRLTNWDAEELAKLVKPG 401 >gi|23127349|ref|ZP_00109222.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 179 Score = 55.9 bits (134), Expect = 5e-07 Identities = 27/136 (19%), Positives = 41/136 (30%), Gaps = 19/136 (13%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 E P +I I E++L W+ K +L+ SY I +P Sbjct: 55 ESDISQTSQPRWIEIDLSEQRLRAWEGK-----KLVYSYRISGGKRST---------PTP 100 Query: 65 EGFYSVQPNQLNPDSRYYLAINI-GFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTD 120 G + + R NI P GY H G VS GC + Sbjct: 101 IGRFRINSKYRTHRMRG-RGYNIPDVPYTMYFYRGYAIHGAYWHNRFGTPVSHGCVNLPV 159 Query: 121 AQIDEIFAFVRDAFVG 136 Q ++ + + Sbjct: 160 KQARNVYNWASYGTLV 175 >gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbiobacterium thermophilum IAM 14863] Length = 354 Score = 55.5 bits (133), Expect = 8e-07 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 39/158 (24%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGDFQSPE 65 P P I + K L ++ + +L+++ + GP E +P Sbjct: 206 PPEPTVIVVDKGLNVLWYYE-----DGELVQTARVSTGRHVAGPAPSPDNWTENLL-TPT 259 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY---------TGKYLM-IHGAC----- 110 G ++V + P YY I + + G L IHG Sbjct: 260 GRFTVTL--MVPGMPYYKE-GIDALDPANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEAL 316 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 S G M++ ++++++ V V I Sbjct: 317 GRWNSEGSIVMSNGEVEQLYERVELG-------TPVII 347 >ErfK_YbiS_YhnG_Q5ZV45_94-231_PF03734.4 Length = 138 Score = 55.5 bits (133), Expect = 8e-07 Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 37/142 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + ++ +YP+ G ++P G + ++N Sbjct: 6 VVINLAEYRLYYFPPDDN----VVMTYPVGIGKKGW---------ETPLGLSRIISKEIN 52 Query: 77 PDSRYYL-------AINIGFPNAYDRA-HGYTGKY--------LMIHGAC--------VS 112 P R + +I P+ + H G++ ++IHG+ VS Sbjct: 53 PTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQHVLRLGWPAILIHGSNRVDGIGAKVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAF 134 GC M I+ +++ V Sbjct: 113 AGCIRMLPEDIEHLYSLVSVGT 134 >gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str. Bath] Length = 361 Score = 55.1 bits (132), Expect = 9e-07 Identities = 30/163 (18%), Positives = 47/163 (28%), Gaps = 54/163 (33%) Query: 17 IRIFKEERKLELW-KAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + E +L + A G + + +YPI D++SP G V Sbjct: 98 IVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRM---------DWRSPLGLTKVVAKVK 148 Query: 76 NPDSRYYLAINIGFPNAYDRA-HGYTGK------------------------YLMIHGAC 110 +P R P A +A H G+ +IHG Sbjct: 149 DPVWR---------PPASIKAEHAKNGEILPDVVPAGPNNPLGQFAMRLGVPGYLIHGTD 199 Query: 111 ----------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 V+ GC M + ++F V + V Sbjct: 200 QDKSYGIGMRVTHGCIRMYPEDVAKLFPEVAVGTPVNLVNQPV 242 >gi|17936017|ref|NP_532807.1| hypothetical protein Atu2133 [Agrobacterium tumefaciens str. C58] Length = 472 Score = 55.1 bits (132), Expect = 9e-07 Identities = 32/153 (20%), Positives = 45/153 (29%), Gaps = 35/153 (22%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + G I K +++ + G + LI +YP S D SP Sbjct: 329 PGEAKKGQVARIVAHKGIKQVFAY----GQDGNLIAAYPATIGS---------TDTPSPS 375 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGAC- 110 G ++V+ LNP Y IN G IHG Sbjct: 376 GTHTVERIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKPTYGIHGTPE 435 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC +T+ E+ VR V Sbjct: 436 PSKIGKTNSHGCIRLTNWDATELAKMVRPGVVV 468 >gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 172 Score = 55.1 bits (132), Expect = 9e-07 Identities = 35/136 (25%), Positives = 48/136 (35%), Gaps = 21/136 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 +P I + ER+L L YP+ G G R EG +++P Sbjct: 37 APGTIVVKTSERRLYLIIDSDRAL-----RYPVGVGRAGKQWSGAARIEGKYRNPAWAPP 91 Query: 70 VQPNQLNPDSRYYLAINIGFP-NAYDRAHGY--TGKYLMIHGAC--------VSVGCYAM 118 + + NP R I G P N A G IHG VS GC M Sbjct: 92 AEVKRDNP--RIADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSIGRFVSYGCIRM 149 Query: 119 TDAQIDEIFAFVRDAF 134 +A ID+++ V Sbjct: 150 YNADIDDLYRRVSVGT 165 >gi|71548630|ref|ZP_00668854.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 323 Score = 55.1 bits (132), Expect = 1e-06 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 34/152 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + + G+ I ++P+ D+ +P G ++ Q + Sbjct: 103 LVINLPEMRLYYFPKPIKGQKPEIITHPVSIGRM---------DWNTPLGKTTIVRKQKD 153 Query: 77 PD-----SRYYLAINIGFP-----------NAYDRAHGYTG-KYLMIHGAC--------V 111 P S AI G P N + Y G +IHG V Sbjct: 154 PTWTPPQSLRKEAIEEGRPPLLDVVPAGPDNPLGKYALYLGLPGYLIHGTNKPLGVGMRV 213 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 + GC + I+E+F + + + Sbjct: 214 THGCMRLYPEDIEELFNLIPTGTPVQIVNQPI 245 >ErfK_YbiS_YhnG_Q818U5_25-151_PF03734.4 Length = 127 Score = 55.1 bits (132), Expect = 1e-06 Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 34/138 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + K KL + ++ K +P+ K E +PEG + V Sbjct: 5 FIIVNKATNKLAYID-----DGKIQKVFPVATG------KTNEL---TPEGTFDVVMKAK 50 Query: 76 NPDSRYYLA--INIGFP-NAYDR------AHGYTGKYLMIHGAC--------VSVGCYAM 118 +P YY+A I G P N A G G IHG +S GC M Sbjct: 51 DP---YYIAKDIPGGSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRM 107 Query: 119 TDAQIDEIFAFVRDAFVG 136 ++ +F + Sbjct: 108 KKNDVEYLFDRIPIGTKV 125 >gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitrosomonas europaea ATCC 19718] Length = 326 Score = 55.1 bits (132), Expect = 1e-06 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 34/152 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + G+ I ++P+ D+ +P G ++ Q + Sbjct: 103 LVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---------DWNTPLGRTTIVRKQKD 153 Query: 77 PD-----SRYYLAINIGFP-----------NAYDRAHGYTG-KYLMIHGAC--------V 111 P S AI G P N R Y G +IH V Sbjct: 154 PTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYALYLGLPGYLIHSTNKPFGVGMRV 213 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 + GC + I+E+F V + V Sbjct: 214 THGCMRLYPEDIEELFNLVPTGTPVQIVNQPV 245 >ErfK_YbiS_YhnG_Q98G98_358-493_PF03734.4 Length = 136 Score = 54.4 bits (130), Expect = 2e-06 Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 39/145 (26%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K ++++ + A +L+ +YP S D SP G ++V Sbjct: 2 PVARIVADKTKKEVYAYDA----SGKLVAAYPATIGSA---------DTPSPTGIHAVSR 48 Query: 73 NQLNPDSRYYLAINIGFPN-AYDRAH----GYTG--KYLMI---------HGACV----- 111 L+P+ Y NI F D+ G G + I HG Sbjct: 49 IALDPNYTYNP--NINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIG 106 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ E+ V Sbjct: 107 KTESHGCVRLTNWDARELAKLVSPG 131 >ErfK_YbiS_YhnG_Q7V696_87-217_PF03734.4 Length = 131 Score = 54.4 bits (130), Expect = 2e-06 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 34/137 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + R++ + + + + + +P+ +P G + V+ +N Sbjct: 6 VVLLLGRREISVIR-----DGEKLGPWPVAIGDPRT---------PTPTGVFKVENKVIN 51 Query: 77 PDSRYYLA------INIGFPNAYDRAHG--YTGKYLM-IHGACV----------SVGCYA 117 P + + I + P DR G +G+ IHG + GC Sbjct: 52 PQYQSTKSGRVNPAIGVASP-LGDRWIGFLQSGQNQFGIHGTPWPYWVNAKAAVTNGCVR 110 Query: 118 MTDAQIDEIFAFVRDAF 134 M A + ++F V Sbjct: 111 MLHAHVRQLFDVVEVGT 127 >gi|71837791|ref|ZP_00677554.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 292 Score = 54.0 bits (129), Expect = 2e-06 Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 30/135 (22%) Query: 1 PVSKELKQQLPGSPVY---IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 P+ K Q + Y I + E+ L ++ +L+ S P G Sbjct: 115 PMPK----QYEPARRYDKYILVDLTEQWLGAYENG-----RLVFSTPAATGKAG------ 159 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAIN--IGFP--NAYDRAHGYTGKYLMIH-----G 108 ++P G + + L S Y N +P NA G G +H G Sbjct: 160 ---NETPTGLFRITARHLTHTSSLYKTANDEEQYPMDNAMRFHVGPDGVSYWLHARDLPG 216 Query: 109 ACVSVGCYAMTDAQI 123 S GC + D ++ Sbjct: 217 RPASHGCIGLYDEEM 231 >ErfK_YbiS_YhnG_Q8UDJ2_335-470_PF03734.4 Length = 136 Score = 54.0 bits (129), Expect = 2e-06 Identities = 32/147 (21%), Positives = 44/147 (29%), Gaps = 35/147 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + G + LI +YP S D SP G ++V+ Sbjct: 1 GQVARIVAHKGIKQVFAY----GQDGNLIAAYPATIGS---------TDTPSPSGTHTVE 47 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGAC------- 110 LNP Y IN G IHG Sbjct: 48 RIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 107 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC +T+ E+ VR V Sbjct: 108 TNSHGCIRLTNWDATELAKMVRPGVVV 134 >gi|67934041|ref|ZP_00527134.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 317 Score = 54.0 bits (129), Expect = 2e-06 Identities = 24/123 (19%), Positives = 36/123 (29%), Gaps = 31/123 (25%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAY 93 +L+ Y S E D P G + ++ NP Y + + Sbjct: 198 DEGGKLLAFYSATIGS--------EHD-PLPIGEWKIKGVGRNPKFHYNAELFWDAKDRN 248 Query: 94 DRAHGYTG--------------KYLMIHGACV--------SVGCYAMTDAQIDEIFAFVR 131 DR G ++ IHG S GC +T+ E+ A VR Sbjct: 249 DRETLPPGPNNPVGLVWIDLSKEHYGIHGTPEPGKIGHTESHGCIRLTNWDALELAAMVR 308 Query: 132 DAF 134 Sbjct: 309 PGT 311 >ErfK_YbiS_YhnG_Q8Z7I2_99-240_PF03734.4 Length = 142 Score = 53.6 bits (128), Expect = 3e-06 Identities = 32/147 (21%), Positives = 45/147 (30%), Gaps = 39/147 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ + YPI G GD +P ++ + N Sbjct: 6 IVINLAELRLYYYQPGKN----TVTVYPIGIGQLG-------GDTLTPTMVTTISDKRAN 54 Query: 77 PD-------SRYYLAINIGFP------------NAYDRAHGYTGKYLMIHGAC------- 110 P Y A I P + R Y G YL +HG Sbjct: 55 PTWTPTTNIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYL-LHGTNAGFGIGM 113 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC + D I+ +F V Sbjct: 114 RVSSGCIRLRDGDIETLFRQVTPGTKV 140 >gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 194 Score = 53.6 bits (128), Expect = 3e-06 Identities = 30/137 (21%), Positives = 45/137 (32%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 P I + +R+L + G + Y + G G K G + P Sbjct: 61 EKPGTIVVSTSQRRLY-YVLGGGEAIR----YGVGVGRQGFSWSGTKTITGKKEWPAWRP 115 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 Q PD Y + G N Y G L IHG+ VS GC MT Sbjct: 116 PAQMLARRPDLPRY--MAGGQDNPLGARAMYLGSSLYRIHGSNEPETMGAAVSSGCIRMT 173 Query: 120 DAQIDEIFAFVRDAFVG 136 + + +++ V+ Sbjct: 174 NKDVVDLYDRVKVGTKV 190 >gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 386 Score = 53.2 bits (127), Expect = 4e-06 Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 33/144 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + + E+K +++ ++ L K++ EG ++P G ++VQ Sbjct: 264 YLVFVNIAEQKTYVYEGSKN-DWTLDKTFTCSTG--------IEG-KETPVGVFTVQNRA 313 Query: 74 ------QLNPDSRYYLAINIGF-----PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQ 122 + +YY+ + P D+ T + G S GC ++ Sbjct: 314 PWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDKT---TVSDPTL-GVPSSHGCIRLSVED 369 Query: 123 IDEIFAFVRDAFVGGQPSVQVSIY 146 ++ V++ + IY Sbjct: 370 SKWLYDNVQNGSK-------IIIY 386 >gi|68189539|gb|EAN04205.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 490 Score = 53.2 bits (127), Expect = 4e-06 Identities = 32/147 (21%), Positives = 46/147 (31%), Gaps = 43/147 (29%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I K +++ L+ +LI YP S D SP G + V+ Sbjct: 354 AVARIVADKSRKQVRLF----DEGGRLIGVYPATIGSS---------DTPSPTGIHQVER 400 Query: 73 NQLNPDSRYY-------------LAINIGFPN-----AYDRAHGYTGKYLMIHGAC---- 110 LNP+ Y L I G PN + T IHG Sbjct: 401 VALNPNYTYDPRKNFKQGNNDKVLTIPPG-PNGPVGSVWIALSKPT---YGIHGTPEPSK 456 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ E+ V+ Sbjct: 457 IGKTYSHGCVRLTNWDAQELAKRVKPG 483 >ErfK_YbiS_YhnG_Q89WV4_37-169_PF03734.4 Length = 133 Score = 53.2 bits (127), Expect = 4e-06 Identities = 28/143 (19%), Positives = 40/143 (27%), Gaps = 36/143 (25%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP I + ER+L L YP+ G K+ G + + Sbjct: 2 SPGTIVVKTNERRLYLILDDG-----HAVRYPVGVGKSG---KQWAGTTR-------IDG 46 Query: 73 NQLNPDSRYYLAINIGFPNAYD-------------RAHGYTGKYLMIHGACV-------- 111 NP + P D A G IHG V Sbjct: 47 KYRNPAWSPPAEVKRDKPQLPDVIPGGSPRNPMGVAAMTLAGGEYAIHGTNVPGSVGGFV 106 Query: 112 SVGCYAMTDAQIDEIFAFVRDAF 134 S GC M + I ++++ V Sbjct: 107 SYGCIRMLNDDITDLYSRVSVGT 129 >gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 53.2 bits (127), Expect = 4e-06 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 27/165 (16%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 S+ + LP P+ I I ++++ L+ LI + EG Sbjct: 65 SETAPEPLPKGPLQIIISIADQRVSLFDNG-----ALIARSSVSTG--------MEG-HP 110 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYA 117 +P G +SV Q S Y A + + T + +H G S GC Sbjct: 111 TPLGVFSVISKQRWHRSNIYSAAPMPY------MQRITWSGIALHAGVVPGHPASHGCIR 164 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP 162 + ++ + V P +T+ ++ + + S Sbjct: 165 LKSDFAVRLWHLTKRGTRVIIAHGDVQ--PVEITNPHLFQAKASS 207 >gi|37676018|ref|NP_936414.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 305 Score = 52.8 bits (126), Expect = 4e-06 Identities = 29/153 (18%), Positives = 47/153 (30%), Gaps = 39/153 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ ++G + +P+ G +PE S++ + N Sbjct: 98 IVINLAELRLYYFEPELGK----VHVFPVGIGRVG---------RDTPEMVTSIREKRPN 144 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGAC-------- 110 P + Y I P Y Y +IHG Sbjct: 145 PTWTPPASIRKEYREKGIELPKIIPAGPDNPLGEYALRLAYGSGDYLIHGTNKDFGIGLR 204 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 VS GC M I+ +F+ V + V Sbjct: 205 VSAGCIRMEPKDIEWLFSQVDKGQRVKIINQPV 237 >gi|68189671|gb|EAN04335.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 266 Score = 52.8 bits (126), Expect = 5e-06 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 27/153 (17%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------- 53 + +E++ P +P I + +ER L L + Y + G G Sbjct: 120 LPQEVRYDGPQAPGTIVVDTKERFLYLVLKDGQA-----RRYGVGVGKDGFGWTGTHKVT 174 Query: 54 PKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP-NAYDRAHGYTGKYLM-IHGAC- 110 KR D++ P + + N + + G P N Y G L IHG Sbjct: 175 AKREWPDWRPP--AEMIARERKN--GKILPTLVKGGPQNPLGARALYLGSTLYRIHGTNA 230 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + +++ V Sbjct: 231 PWTIGQAVSSGCIRMRNEDVIDLYERVSVGTKV 263 >gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 158 Score = 52.8 bits (126), Expect = 5e-06 Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 18/136 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 +P I + ER+L L + G+ I+ YP+ G G +G + P+ Sbjct: 25 APGSIVVSTSERRLYL----VNGDGTAIR-YPVAVGKPGKQWSGATEIDGKYYQPDWSPP 79 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-GKYLMIHGAC--------VSVGCYAMTD 120 + + NP L N A G IHG S GC M + Sbjct: 80 REVKRDNPRLP-NLIRGGSPSNPMGAAAMTLRGGEYAIHGTNRPSSIGTYASYGCIRMYN 138 Query: 121 AQIDEIFAFVRDAFVG 136 I ++ V Sbjct: 139 QDITDLIERVSVGTQV 154 >gi|68174957|ref|ZP_00548215.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 274 Score = 52.8 bits (126), Expect = 5e-06 Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 31/132 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP--NQ 74 +++ + +L L++ LI + + + D +P G Y + Sbjct: 154 LQVVRGAHQLRLYRGN-----TLISLFVVAVGT---------TDTPTPGGRYYLTELLRP 199 Query: 75 LNPDSRYY-LAINIGFPNAYDRAHGYTGKY---LMIHGAC--------VSVGCYAMTDAQ 122 NP Y A + + + + + +HG VS GC ++++ Sbjct: 200 RNPTGPYGPFAFGLS---GFSTSLASFEGHAPIIGLHGTDQPHTLGRDVSHGCIRLSNSD 256 Query: 123 IDEIFAFVRDAF 134 I + + Sbjct: 257 ITWLAGMLPLGT 268 >gi|71364962|ref|ZP_00655525.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 432 Score = 52.8 bits (126), Expect = 5e-06 Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 32/135 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + K ++ L + +L+ +YP S SP+G + + Sbjct: 306 VVANKADKTLYAYNDD-----KLVATYPTTVGSDST---------PSPQGTFKIVNKVKM 351 Query: 77 PDSRYY------LAINIGFPNAYDRAH----GYTGKYLMIHGAC--------VSVGCYAM 118 P + +++ P G + +HG+ S GC + Sbjct: 352 PWYKATVGEGADKKVHMLPPGPNSPVGVVWMGLSKPSYGLHGSPKPEGISRQASAGCVRL 411 Query: 119 TDAQIDEIFAFVRDA 133 T+ + E++A + + Sbjct: 412 TNWDVLEVYANIENG 426 >ErfK_YbiS_YhnG_Q92K34_317-452_PF03734.4 Length = 136 Score = 52.4 bits (125), Expect = 6e-06 Identities = 31/145 (21%), Positives = 43/145 (29%), Gaps = 37/145 (25%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + +LI +YP S D SP G V+ Sbjct: 1 GKVARIVADKARKQVLAY----DEAGKLIAAYPSTIGSS---------DTPSPSGTVHVE 47 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAH----GYTG--KYLMI---------HGACV----- 111 +P Y IN A DR G G + I HG Sbjct: 48 RIAFDPGYTYNPKINFQQ-GANDRILQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIG 106 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ E+ V Sbjct: 107 KTQSHGCVRLTNWDATELGKMVSTG 131 >gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 52.4 bits (125), Expect = 6e-06 Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 39/144 (27%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +P I + ER+L L Q ++ Y I G R G G + + Sbjct: 72 APGTIVVNTSERRLYLVLQN----GQALR-YGIGVGRDG----FRWG------GVHRITA 116 Query: 73 NQ-------------LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC-------- 110 + PD ++ I N Y G L IHG+ Sbjct: 117 KKEWPDWTPPSQMLARRPDLPRHMKGGIE--NPLGARAMYLGSTLYRIHGSNEPETIGQA 174 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC+ MT+ + ++++ V Sbjct: 175 VSSGCFRMTNDDVSDLYSRVSVGT 198 >gi|15075231|emb|CAC46787.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 454 Score = 52.4 bits (125), Expect = 6e-06 Identities = 31/145 (21%), Positives = 43/145 (29%), Gaps = 37/145 (25%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + +LI +YP S D SP G V+ Sbjct: 317 GKVARIVADKARKQVLAY----DEAGKLIAAYPSTIGSS---------DTPSPSGTVHVE 363 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAH----GYTG--KYLMI---------HGACV----- 111 +P Y IN A DR G G + I HG Sbjct: 364 RIAFDPGYTYNPKINFQQ-GANDRILQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIG 422 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDA 133 S GC +T+ E+ V Sbjct: 423 KTQSHGCVRLTNWDATELGKMVSTG 447 >gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein family [Psychrobacter arcticum 273-4] Length = 473 Score = 52.4 bits (125), Expect = 7e-06 Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 32/135 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + K ++ L + +L+ +YP S SP+G + + Sbjct: 347 VVANKADKTLYAYNDD-----KLVATYPTTVGSDST---------PSPQGTFKIVNKVKM 392 Query: 77 PDSRYY------LAINIGFPNAYDRAH----GYTGKYLMIHGAC--------VSVGCYAM 118 P + +++ P G + +HG+ S GC + Sbjct: 393 PWYKATVGEGTDKKVHMLPPGPNSPVGVVWMGLSKPSYGLHGSPKPEGISRQASAGCVRL 452 Query: 119 TDAQIDEIFAFVRDA 133 T+ + E++A + + Sbjct: 453 TNWDVLEVYANIENG 467 >gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 186 Score = 52.4 bits (125), Expect = 7e-06 Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 34/138 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + K KL + ++ K P+ K E +PEG + V Sbjct: 29 FIIVNKATNKLAYID-----DGKIQKVSPVATG------KTNEL---TPEGTFDVVMKAK 74 Query: 76 NPDSRYYLA--INIGFP-NAYDR------AHGYTGKYLMIHGAC--------VSVGCYAM 118 +P YY+A I G P N A G G IHG +S GC M Sbjct: 75 DP---YYIAKDIPGGSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRM 131 Query: 119 TDAQIDEIFAFVRDAFVG 136 ++ +F + Sbjct: 132 KKNDVEYLFDRIPIGTKV 149 >ErfK_YbiS_YhnG_Q67P27_207-347_PF03734.4 Length = 141 Score = 52.4 bits (125), Expect = 7e-06 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 39/157 (24%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGDFQSPEG 66 P I + K L ++ + +L+++ + GP E +P G Sbjct: 1 PEPTVIVVDKGLNVLWYYE-----DGELVQTARVSTGRHVAGPAPSPDNWTENLL-TPTG 54 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY---------TGKYLM-IHGAC------ 110 ++V + P YY I + + G L IHG Sbjct: 55 RFTVTL--MVPGMPYYKE-GIDALDPANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALG 111 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 S G M++ ++++++ V V I Sbjct: 112 RWNSEGSIVMSNGEVEQLYERVELG-------TPVII 141 >ErfK_YbiS_YhnG_Q89M18_213-348_PF03734.4 Length = 136 Score = 52.1 bits (124), Expect = 7e-06 Identities = 26/144 (18%), Positives = 39/144 (27%), Gaps = 35/144 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K + ++L+ LI YP S D SP G V Sbjct: 2 KADRVEVDKVRQTVKLFDKSN----ALIGFYPATVGSE---------DKPSPSGTLKVTE 48 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTG--------------KYLMIHGACV------- 111 NP RY A + + G + IHG Sbjct: 49 VSKNPLYRYNPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAEGYGIHGTPSPDKISKA 108 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAF 134 S GC +T+ + + V Sbjct: 109 ESHGCVRLTNWDAERVAGSVAKGT 132 >gi|46400440|emb|CAF23889.1| hypothetical protein [Parachlamydia sp. UWE25] Length = 325 Score = 52.1 bits (124), Expect = 7e-06 Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 35/149 (23%) Query: 14 PVYIRIFKEERKLELWK-AKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 Y+ + K+ + A + LIK+YP+ +P G YS+ Sbjct: 157 QFYLIVDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRL---DSSSSSGLLTPLGKYSLGD 213 Query: 73 N----QLNPDSRY---YLAINIGFPNAYDRAHGYTG------KYLMIHGACV-------- 111 + Y + F + G K IHG Sbjct: 214 RIATYKPKSMGIYQGKKTEMITVFGTRWIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAV 273 Query: 112 ----------SVGCYAMTDAQIDEIFAFV 130 S GC +T ++E+F+ + Sbjct: 274 DQIDSVGKYQSDGCIRLTTPDMEELFSII 302 >gi|69937030|ref|ZP_00631751.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 493 Score = 52.1 bits (124), Expect = 8e-06 Identities = 34/150 (22%), Positives = 48/150 (32%), Gaps = 44/150 (29%) Query: 11 PGSPVY-----IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 P P+ I + KE R++ + AK ++ YP S D SP Sbjct: 211 PAKPIRATVTRIIVDKETRRVAAYDAKGN----MVADYPATVGSA---------DTPSPH 257 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPN-AYDRAH----GYTG--KYLMI---------HGA 109 G + V LNP Y + F DR G G + I HG Sbjct: 258 GNHVVDAVALNPTYTYNP--HRNFKQGQNDRVLTIPPGPNGPVGNVWIDLSEPTYGIHGT 315 Query: 110 --------CVSVGCYAMTDAQIDEIFAFVR 131 S GC +T+ E+ V+ Sbjct: 316 ATPSQLFLNQSHGCVRLTNWDAWELAHMVK 345 >gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 324 Score = 52.1 bits (124), Expect = 8e-06 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 21/133 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + I K + L L+ A + ++ +P+ S +G + G + P+ Y Sbjct: 188 KPAKLVIDKSDSTLRLFDA----QGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKFHY 243 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRA-HGYTGKYLMIHGACV--------SVGCYA 117 + + + + L P L HG S GC Sbjct: 244 NPKLFWDAKPGEGKATLPPGPNNPVGRVWIDLSKPHYGL--HGTPEPGHVGKTESHGCVR 301 Query: 118 MTDAQIDEIFAFV 130 +T+ + + + V Sbjct: 302 LTNWDVVNLASVV 314 >ErfK_YbiS_YhnG_Q89E55_71-202_PF03734.4 Length = 132 Score = 52.1 bits (124), Expect = 9e-06 Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 39/144 (27%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +P I + ER+L L Q ++ Y I G R G G + + Sbjct: 2 APGTIVVNTSERRLYLVLQN----GQALR-YGIGVGRDG----FRWG------GVHRITA 46 Query: 73 NQ-------------LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC-------- 110 + PD ++ I N Y G L IHG+ Sbjct: 47 KKEWPDWTPPSQMLARRPDLPRHMKGGIE--NPLGARAMYLGSTLYRIHGSNEPETIGQA 104 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC+ MT+ + ++++ V Sbjct: 105 VSSGCFRMTNDDVSDLYSRVSVGT 128 >gi|69926066|ref|ZP_00623537.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 187 Score = 52.1 bits (124), Expect = 9e-06 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 40/157 (25%) Query: 1 PVSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 P+ ++ + Q +P I I ER+L L + + Q ++ Y I G R G Sbjct: 42 PIPRQLVHFQSRYAPGTIVISTGERRLYL----VLPDGQALR-YGIGVGRDG----FRWG 92 Query: 60 DFQSPEGFYSVQPNQ-------------LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM- 105 G + + + PD ++ I N Y G L Sbjct: 93 ------GVHRITAKKEWPSWTPPAQMLRRRPDLPRHMKGGID--NPLGARALYLGSTLYR 144 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAF 134 IHG+ VS GC+ MT+ + +++ V Sbjct: 145 IHGSNEPETIGHAVSSGCFRMTNEDVKDLYDRVSVGT 181 >gi|71836515|ref|ZP_00676284.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 471 Score = 52.1 bits (124), Expect = 9e-06 Identities = 31/151 (20%), Positives = 46/151 (30%), Gaps = 32/151 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +R L +K E +L S P+ G D+ +P G + V Q + Sbjct: 266 IVINIPDRTLYYFK-----EGKLTTSLPVALGQPQKGATY---DWMTPTGKFRVVAKQTD 317 Query: 77 PDSRYYLAINIGF------------PNAYDRAHGYTGK----YLMIHGAC--------VS 112 P +I P + Y K ++IH S Sbjct: 318 PTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHSTTRPGSIYRFAS 377 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 GC + Q+ + F VR G V Sbjct: 378 HGCIRVYPEQMKDFFNEVRVNTPGEIIYQPV 408 >gi|58580802|ref|YP_199818.1| hypothetical protein XOO1179 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 365 Score = 51.7 bits (123), Expect = 9e-06 Identities = 22/148 (14%), Positives = 42/148 (28%), Gaps = 51/148 (34%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG--GLGPKRREGDFQSPEGFYSV 70 P + + K + L L+ A + ++ +P+ S L P + + Sbjct: 229 KPAKLVVDKSDSTLRLFDA----DGKVYAQFPVSSGSKHDPL-----------PIRRWKI 273 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-----------TGKYLMI---------HGAC 110 NP +Y + +D G + I HG Sbjct: 274 LGVARNPVFKYNPTL------FWDAKKGEQKATLPPGPNNPVGRVWIDLSKPHYGLHGTP 327 Query: 111 V--------SVGCYAMTDAQIDEIFAFV 130 S GC +T+ + + + V Sbjct: 328 EPGHVGKTESHGCVRLTNWDVVNLASVV 355 >ErfK_YbiS_YhnG_Q8FX96_108-243_PF03734.4 Length = 136 Score = 51.7 bits (123), Expect = 1e-05 Identities = 22/141 (15%), Positives = 37/141 (26%), Gaps = 23/141 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ-------SP 64 P I I R L L +A + Y + G K + + +P Sbjct: 1 EKPGTIVIDTASRFLYLVQADG-----KARRYGVGVGKQGFSWKGTQRISRKAEWPTWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGA--CVS------VGC 115 + + + I N Y G L IHG + GC Sbjct: 56 PSEMIARERKKGRFLPARMDGGIN--NPLGARALYLGSTLYRIHGTNQPWTIGKAMSSGC 113 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 M + + +++ Sbjct: 114 IRMRNEDVTDLYERTPVGTRV 134 >gi|69950815|ref|ZP_00638633.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 305 Score = 51.7 bits (123), Expect = 1e-05 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 37/153 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS-VQPNQL 75 + I E +L + L PI G +PE + + VQ + Sbjct: 99 VVINSAEMRLYYYPKGKNTVEVL----PIGIGQIGKD---------TPENWVTTVQRKRA 145 Query: 76 NPD-------SRYYLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 NP + Y A I P N Y G +HG VS Sbjct: 146 NPTWTPTVNIRKSYAAKGITLPAVWPAGADNPMGLFALYVGNLYAVHGTNATFGIGLRVS 205 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + D I+ ++ V + + Sbjct: 206 SGCVRLRDEDIEHLYNSVPVGTRVEFINQPIKA 238 >gi|75675776|ref|YP_318197.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 493 Score = 51.7 bits (123), Expect = 1e-05 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 34/149 (22%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P P+ I + + ++++ L P+ G +P G +SV Sbjct: 104 PNGPIIIAVSIRRQTMKVYDGNG-----LFAETPVSTGMRG---------HSTPMGVFSV 149 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIH-----GACVSVGCYAMTDAQID 124 + ++ + NI + NA T + +H G S GC M Sbjct: 150 IQKRK-----WHRS-NI-YSNAPMPYMQRITWSGIAMHAGALPGYPASHGCIRMPLDFAV 202 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 +++ + R V I P +T A Sbjct: 203 KMWGWTRIGAR-------VIITPGEVTPA 224 >gi|17989404|ref|NP_542037.1| PROTEIN YBIS PRECURSOR [Brucella melitensis 16M] Length = 277 Score = 51.7 bits (123), Expect = 1e-05 Identities = 22/141 (15%), Positives = 37/141 (26%), Gaps = 23/141 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ-------SP 64 P I I R L L +A + Y + G K + + +P Sbjct: 141 EKPGTIVIDTASRFLYLVQADG-----KARRYGVGVGKQGFSWKGTQRISRKAEWPTWTP 195 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGA--CVS------VGC 115 + + + I N Y G L IHG + GC Sbjct: 196 PSEMIARERKKGRFLPARMDGGIN--NPLGARALYLGSTLYRIHGTNQPWTIGKAMSSGC 253 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 M + + +++ Sbjct: 254 IRMRNEDVTDLYERTPVGTRV 274 >gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yersinia pseudotuberculosis IP 32953] Length = 354 Score = 51.7 bits (123), Expect = 1e-05 Identities = 32/166 (19%), Positives = 47/166 (28%), Gaps = 41/166 (24%) Query: 6 LKQQLPGSPVY--IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 Q L I I E +L + G+ ++I YPI G + Sbjct: 88 PNQMLLPDTPREGIVINLAELRLYYY---PKGQNKVI-VYPIGIGQLG---------RDT 134 Query: 64 PEGFYSVQPNQLNPD-------SRYYLAINIGFPNA-----------YDRAHGYTGKYLM 105 P S+ NP + YLA I P+ + + Sbjct: 135 PTMVTSISQKIPNPTWTPTANIRKNYLAEGITLPSVVPAGPDNPMGQFALRLSAGRGEYL 194 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 IHG VS GC + I+ +F V + V Sbjct: 195 IHGTNADFGIGLRVSSGCIRLRPDDIEALFNSVPKGTRVQIINEPV 240 >ErfK_YbiS_YhnG_Q82U48_98-240_PF03734.4 Length = 143 Score = 51.3 bits (122), Expect = 1e-05 Identities = 31/154 (20%), Positives = 48/154 (31%), Gaps = 41/154 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + G+ I ++P+ D+ +P G ++ Q + Sbjct: 6 LVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---------DWNTPLGRTTIVRKQKD 56 Query: 77 PD-----SRYYLAINIGFP-----------NAYDRAHGYTG-KYLMIHGAC--------V 111 P S AI G P N R Y G +IH V Sbjct: 57 PTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYALYLGLPGYLIHSTNKPFGVGMRV 116 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + GC + I+E+F V V I Sbjct: 117 THGCMRLYPEDIEELFNLVPTG-------TPVQI 143 >gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] Length = 170 Score = 51.3 bits (122), Expect = 1e-05 Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 29/117 (24%) Query: 36 EYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR 95 E ++ K PI ++P G +++ P YY NI + + Sbjct: 45 EGKIQKIVPIATGKP---------SDKTPVGLFTITVKAEQP---YYRKKNIAGGDPKNP 92 Query: 96 AHGY---------TGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFV 135 G+ IHG V+ GC + + +++E++A + Sbjct: 93 LGTRWLGFDAKDTEGRTYGIHGTNRPESIGRYVTAGCIRLQNKEVEELYANIPLGTK 149 >ErfK_YbiS_YhnG_Q98PA3_31-163_PF03734.4 Length = 133 Score = 51.3 bits (122), Expect = 2e-05 Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 21/134 (15%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY--SV 70 I + K R + + G++ + +P S G + ++P Y Sbjct: 5 IEVDKGARLVRVL--DPSGKW--LAVFPASIGSAEKPAPSGEAEVKRVVRNPTYHYDPRF 60 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 + + +A P + + + IHG S GC +T+ Sbjct: 61 AFKGVKAKRPFTIAAGPNNPVVWIDL---SIESYGIHGTPEPGKIGTTFSHGCIRLTNWD 117 Query: 123 IDEIFAFVRDAFVG 136 +++ + V+ Sbjct: 118 AEDLASMVQKGTKV 131 >ErfK_YbiS_YhnG_Q8XPD9_262-385_PF03734.4 Length = 124 Score = 50.9 bits (121), Expect = 2e-05 Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 26/133 (19%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + + E+K +++ ++ L K++ EG ++P G ++VQ Sbjct: 3 YLVFVNIAEQKTYVYEGSKN-DWTLDKTFTCSTG--------IEG-KETPVGVFTVQNRA 52 Query: 74 ------QLNPDSRYYLAINIGF-----PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQ 122 + +YY+ + P D+ T + G S GC ++ Sbjct: 53 PWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDKT---TVSDPTL-GVPSSHGCIRLSVED 108 Query: 123 IDEIFAFVRDAFV 135 ++ V++ Sbjct: 109 SKWLYDNVQNGSK 121 >gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 175 Score = 50.9 bits (121), Expect = 2e-05 Identities = 28/147 (19%), Positives = 41/147 (27%), Gaps = 36/147 (24%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 SP I + ER+L L + ++ YP+ G K+ G + Sbjct: 40 DYSPGTIVVRTGERRLYL----VVEPGHAVR-YPVGVGKAG---KQWA-------GVTKI 84 Query: 71 QPNQLNPDSRYYLAINIGFPNAYD-------------RAHGYTGKYLMIHGAC------- 110 NP + P D A G IHG Sbjct: 85 DGKFRNPAWAPPAEVKRDVPTIPDVIPGGSPANPMGVAAMTLAGGEYAIHGTNRPQSIGG 144 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + I +++ V Sbjct: 145 FVSYGCIRMLNDDITDLYERVPVGTQV 171 >gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 153 Score = 50.9 bits (121), Expect = 2e-05 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 46/139 (33%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ + + + IKS+ + +P+G + + N Sbjct: 31 LIVNTQLNKMDYY-----QDGKFIKSFAVATGKAAT---------PTPKGTFQIVNKIKN 76 Query: 77 PDSRYY---------------LAINIGFPNAYDRAHGYTGKYLMIHGACV--------SV 113 YY + + Y + IHG ++ Sbjct: 77 R--PYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYA-------IHGTNNNQAIGKATTL 127 Query: 114 GCYAMTDAQIDEIFAFVRD 132 GC M + I +F V+ Sbjct: 128 GCIRMYNNDIHWLFERVQQ 146 >gi|75855745|ref|ZP_00763388.1| COG1376: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 301 Score = 50.9 bits (121), Expect = 2e-05 Identities = 27/153 (17%), Positives = 43/153 (28%), Gaps = 39/153 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + ++ +P+ G +P + + N Sbjct: 97 IVINLAELRLYYFPKGED----IVHVFPVGIGRIG---------RDTPVMTTRISQKRPN 143 Query: 77 PD-------SRYYLAINIGFPNA-----------YDRAHGYTGKYLMIHGAC-------- 110 P Y A I P + Y +IHG Sbjct: 144 PTWTPPASIRAEYKAKGIDLPTVVPAGPDNPLGMFALRLAYGNGEYLIHGTNKDFGIGMR 203 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 VS GC M + I+ +F VR+ + V Sbjct: 204 VSAGCIRMDPSDIEWLFEKVRNGEEVNIINQPV 236 >gi|69930773|ref|ZP_00627470.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 503 Score = 50.5 bits (120), Expect = 2e-05 Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 32/148 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P P+ I I + L+++ A L P+ G +P G +SV Sbjct: 104 PQGPIIIAISIRRQTLKVYDANG-----LFAETPVSTGMRG---------HSTPMGVFSV 149 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDE 125 Q S Y + + + +H G S GC M + + Sbjct: 150 IQKQKWHRSNIYSGAPMPYMQRITW------SGIAMHAGVLPGYPASHGCIRMPMSFAVK 203 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 ++ + R V I P +T A Sbjct: 204 MWRWTRIGAR-------VIITPGEVTPA 224 >gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Bradyrhizobium japonicum USDA 110] Length = 171 Score = 50.5 bits (120), Expect = 2e-05 Identities = 27/139 (19%), Positives = 39/139 (28%), Gaps = 36/139 (25%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 SP I + ER+L L YP+ G K+ G + + Sbjct: 36 DYSPGTIVVKTNERRLYLILDDG-----HAVRYPVGVGKSG---KQWAGTTR-------I 80 Query: 71 QPNQLNPDSRYYLAINIGFPNAYD-------------RAHGYTGKYLMIHGACV------ 111 NP + P D A G IHG V Sbjct: 81 DGKYRNPAWSPPAEVKRDKPQLPDVIPGGSPRNPMGVAAMTLAGGEYAIHGTNVPGSVGG 140 Query: 112 --SVGCYAMTDAQIDEIFA 128 S GC M + I ++++ Sbjct: 141 FVSYGCIRMLNDDITDLYS 159 >gi|39936101|ref|NP_948377.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 537 Score = 50.5 bits (120), Expect = 2e-05 Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 27/138 (19%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 E + P PV I + E++KL ++ A L P+ G +P Sbjct: 93 EKQATKPQGPVVIAVSIEQQKLRVYDANG-----LFAETPVSTGMRG---------HSTP 138 Query: 65 EGFYSVQPNQLNPDSRYYLA-INIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAM 118 G +SV S+Y+ + I G P Y + T + +H G S GC M Sbjct: 139 MGVFSVIQK-----SKYHRSNIYSGAPMPYMQR--ITWSGIALHAGALPGYPASHGCIRM 191 Query: 119 TDAQIDEIFAFVRDAFVG 136 +++ + R Sbjct: 192 PMTFAVKMWGWTRMGARV 209 >ErfK_YbiS_YhnG_Q6MC10_156-311_PF03734.4 Length = 156 Score = 50.5 bits (120), Expect = 2e-05 Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 35/149 (23%) Query: 14 PVYIRIFKEERKLELWK-AKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 Y+ + K+ + A + LIK+YP+ +P G YS+ Sbjct: 2 QFYLIVDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRL---DSSSSSGLLTPLGKYSLGD 58 Query: 73 N----QLNPDSRY---YLAINIGFPNAYDRAHGYTG------KYLMIHGACV-------- 111 + Y + F + G K IHG Sbjct: 59 RIATYKPKSMGIYQGKKTEMITVFGTRWIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAV 118 Query: 112 ----------SVGCYAMTDAQIDEIFAFV 130 S GC +T ++E+F+ + Sbjct: 119 DQIDSVGKYQSDGCIRLTTPDMEELFSII 147 >gi|69945495|ref|ZP_00636533.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 304 Score = 50.5 bits (120), Expect = 2e-05 Identities = 32/164 (19%), Positives = 48/164 (29%), Gaps = 38/164 (23%) Query: 7 KQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + L PI G +PE Sbjct: 87 QLILPNAPREGIVINVAEMRLYYYPKGKNIVEVL----PIGIGQIGKD---------TPE 133 Query: 66 GFYSVQPNQL-NPD-------SRYYLAINIGFP--------NAYDRAHGYTGKYLMIHGA 109 + + + NP + YLA P N Y G IHG Sbjct: 134 KWVTTVQRKRANPTWTPTPRIRKEYLAKGEVLPAVWPAGPDNPMGLFALYIGNLYAIHGT 193 Query: 110 CVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + GC + DA I+ +F V + + + Sbjct: 194 NATFGIGLRISQGCIRLRDADIEHLFNSVPEGTRVEFTNQPIKA 237 >gi|71282503|ref|YP_270846.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Colwellia psychrerythraea 34H] Length = 303 Score = 50.5 bits (120), Expect = 2e-05 Identities = 37/173 (21%), Positives = 55/173 (31%), Gaps = 39/173 (22%) Query: 6 LKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---------GP 54 Q L S I I E +L + + + +P+ GL G Sbjct: 88 PNQMLLPFISRKGIVINLPELRLYYYSPEENK----VHVFPVGIGRQGLSTPLTSTVIGE 143 Query: 55 KRREGDFQ-SPE---------GFY---SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG 101 KR++ D++ + E G Y V NP +Y L + Y Sbjct: 144 KRKDPDWRPTKEMQKRHFAEHGEYLPDVVPAGPNNPFGKYALRLGTS---EYLIHGSNKR 200 Query: 102 KYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDAN 154 + G S GC M D I +F V V+V P +M+ N Sbjct: 201 FGI---GMRASSGCIRMYDDDIKWLFDNVPVNTK-----VRVVNQPVKMSFEN 245 >gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 315 Score = 50.1 bits (119), Expect = 3e-05 Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 37/161 (22%) Query: 7 KQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + K L PI + +P Sbjct: 90 QLILPNTPHSGIVINNAEMRLYYYPEKKNTVIVL----PIAIGTIK---------NATPS 136 Query: 66 GFYSVQPNQLNPDSRYYLAI-----------NIGFP----NAYDRAHGYTGKYLMIHGAC 110 + + ++ P ++ FP N Y K IHG Sbjct: 137 HWITSITHKKKPIWIPTKSMRDEYIKHGEILPTIFPAGSSNPMGLYALYLEKNYAIHGTN 196 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 ++ GC + I+ +F V + V Sbjct: 197 RNFGIGLRITRGCIRLRPEDIEYLFNIVPVGTKVQFINEPV 237 >ErfK_YbiS_YhnG_Q9KCV4_26-152_PF03734.4 Length = 127 Score = 50.1 bits (119), Expect = 3e-05 Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 29/117 (24%) Query: 36 EYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR 95 E ++ K PI ++P G +++ P YY NI + + Sbjct: 20 EGKIQKIVPIATGKP---------SDKTPVGLFTITVKAEQP---YYRKKNIAGGDPKNP 67 Query: 96 AHGY---------TGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFV 135 G+ IHG V+ GC + + +++E++A + Sbjct: 68 LGTRWLGFDAKDTEGRTYGIHGTNRPESIGRYVTAGCIRLQNKEVEELYANIPLGTK 124 >ErfK_YbiS_YhnG_Q8P5X3_187-321_PF03734.4 Length = 135 Score = 49.7 bits (118), Expect = 4e-05 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 21/133 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + I K + L L+ A + ++ +P+ S +G + G + P+ Y Sbjct: 2 KPAKLVIDKSDSTLRLFDA----QGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKFHY 57 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRA-HGYTGKYLMIHGACV--------SVGCYA 117 + + + + L P L HG S GC Sbjct: 58 NPKLFWDAKPGEGKATLPPGPNNPVGRVWIDLSKPHYGL--HGTPEPGHVGKTESHGCVR 115 Query: 118 MTDAQIDEIFAFV 130 +T+ + + + V Sbjct: 116 LTNWDVVNLASVV 128 >gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Bradyrhizobium japonicum USDA 110] Length = 224 Score = 49.7 bits (118), Expect = 4e-05 Identities = 26/155 (16%), Positives = 41/155 (26%), Gaps = 31/155 (20%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------PKR 56 + + I I +L L + Y I GL ++ Sbjct: 68 QRVDYTTNEPVGTIVIDTAAHQLYLVEGDGKAM-----RYGIGVGKDGLAFAGTATIRRK 122 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLA-------INIGFPNAYDRAHGYTGKYLMIHGA 109 E +P P +LA N P A G IHG Sbjct: 123 AEWPHWTPTK----NMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGT 178 Query: 110 --------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC + + I ++++ V+ Sbjct: 179 TEPETIGRAVSSGCIRLINQDIIDLYSRVKIGSRV 213 >gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 283 Score = 49.7 bits (118), Expect = 4e-05 Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 21/147 (14%) Query: 1 PVSKELKQQLPGSPV--YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P + + G I I + L L + + ++ Y + G G K Sbjct: 138 PKFERQLVEYHGKEAAGTIVIDTSNKFLYLVQGG----GKALR-YGVGVGKPGFLWAGTK 192 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG------ 108 + P + + PD ++ N Y G L IHG Sbjct: 193 TISAKREWPAWTPPAEMLKRRPDLPRHMVGGPQ--NPLGARAMYLGSSLYRIHGSNEPWT 250 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDA 133 VS GC M + + +++ VR Sbjct: 251 IGTNVSSGCIRMRNRDVIDLYDRVRVG 277 >gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 192 Score = 49.7 bits (118), Expect = 4e-05 Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 45/149 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + R+L + + + LIKS+ + G ++P G + V + Sbjct: 52 LVLDRRSRRLLVLE-----DGSLIKSFSVAVGMPGW---------ETPTGEFQVLSKTPH 97 Query: 77 P----------------------DSRYYLAINIGFPNAYDRAHGYTG---------KYLM 105 P +Y N + DR G + Sbjct: 98 PIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRW 157 Query: 106 IHGACVSVGCYAMTDAQIDEIFAFVRDAF 134 G VS GC + + I ++ V+ Sbjct: 158 TVGRAVSHGCVRLFEEDIQSLYRLVKIGT 186 >gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibrio parahaemolyticus RIMD 2210633] Length = 308 Score = 49.7 bits (118), Expect = 4e-05 Identities = 27/153 (17%), Positives = 43/153 (28%), Gaps = 39/153 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + ++ +P+ G +P S+ + N Sbjct: 104 IVINLAELRLYYFPEGED----VVHVFPVGIGRIG---------RDTPVMTTSISQKRPN 150 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGAC-------- 110 P Y A + P + Y +IHG Sbjct: 151 PTWTPPASIRAEYRAKGVDLPAVVPAGPDNPLGLFALRLAYGNGEYLIHGTNKDFGIGMR 210 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 VS GC M + I+ +F VR + V Sbjct: 211 VSAGCIRMDPSDIEWLFDKVRRGEKVNIINQPV 243 >gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 321 Score = 49.7 bits (118), Expect = 4e-05 Identities = 28/163 (17%), Positives = 47/163 (28%), Gaps = 42/163 (25%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E ++ + ++ +YP+ G G SP G V Sbjct: 94 PGPREGIVINLAEYRMYYYPKGQN----VVHTYPLGVGREGWG---------SPIGVTKV 140 Query: 71 QPNQLNP---------------DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGACV--- 111 NP + G N G +IHG+ Sbjct: 141 TAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFG 200 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFR 149 S GC+ M + + E+ +V++ P++ Sbjct: 201 IGMRTSHGCFRMYNNNVLELADMAPVGT-----TVRIISEPYK 238 >gi|68515740|gb|EAN39455.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 304 Score = 49.7 bits (118), Expect = 4e-05 Identities = 28/153 (18%), Positives = 45/153 (29%), Gaps = 37/153 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + ++++ PI G +PE + + + Sbjct: 98 IVINIAEMRLYYYPKGK----KIVEVLPIGIGQVG---------RDTPENWVTTVQRKRA 144 Query: 76 NPD-------SRYYLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 NP + Y A + P N Y G IHG VS Sbjct: 145 NPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYIGNLYAIHGTNATFGIGLRVS 204 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + D I+ +F V + + Sbjct: 205 QGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKA 237 >gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct] Length = 324 Score = 49.7 bits (118), Expect = 5e-05 Identities = 25/150 (16%), Positives = 44/150 (29%), Gaps = 41/150 (27%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG + I E +L + ++ +YP+ G G SP + Sbjct: 92 PGPREGVVINLAEYRLYYYPKGQN----VVHTYPLGIGREGWG---------SPIANTRI 138 Query: 71 QPNQLNPDSRYYLA-----------INIGFP-------NAYDRAHGYTGKYLMIHGACV- 111 +P + + P Y G G +IHG+ Sbjct: 139 TAKTKDPAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGY--LIHGSNKK 196 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDAF 134 S GC+ M +A + +F+ + Sbjct: 197 FGIGTRTSHGCFRMYNADVTHLFSMISVGT 226 >gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 215 Score = 49.4 bits (117), Expect = 5e-05 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 21/130 (16%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ A + ++ +P+ S +G + G + P Y Sbjct: 79 KPAKLVVDKSDSTLRLFDA----DGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVFKY 134 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRA-HGYTGKYLMIHGACV--------SVGCYA 117 + + + + L P L HG S GC Sbjct: 135 NPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPHYGL--HGTPEPGHVGKTESHGCVR 192 Query: 118 MTDAQIDEIF 127 +T+ + + Sbjct: 193 LTNWDVVALA 202 >ErfK_YbiS_YhnG_Q60AJ8_93-237_PF03734.4 Length = 145 Score = 49.4 bits (117), Expect = 5e-05 Identities = 29/154 (18%), Positives = 45/154 (29%), Gaps = 54/154 (35%) Query: 17 IRIFKEERKLELW-KAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + E +L + A G + + +YPI D++SP G V Sbjct: 6 IVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRM---------DWRSPLGLTKVVAKVK 56 Query: 76 NPDSRYYLAINIGFPNAYDRA-HGYTGK------------------------YLMIHGAC 110 +P R P A +A H G+ +IHG Sbjct: 57 DPVWR---------PPASIKAEHAKNGEILPDVVPAGPNNPLGQFAMRLGVPGYLIHGTD 107 Query: 111 ----------VSVGCYAMTDAQIDEIFAFVRDAF 134 V+ GC M + ++F V Sbjct: 108 QDKSYGIGMRVTHGCIRMYPEDVAKLFPEVAVGT 141 >gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 153 Score = 49.4 bits (117), Expect = 5e-05 Identities = 18/139 (12%), Positives = 40/139 (28%), Gaps = 46/139 (33%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + IKS+ + +P+G + + N Sbjct: 31 LIVNTQLNKMDYYQNG-----KFIKSFTVATGKAAT---------PTPKGTFQIVNKIKN 76 Query: 77 PDSRYY---------------LAINIGFPNAYDRAHGYTGKYLMIHGACV--------SV 113 YY + + Y + IHG ++ Sbjct: 77 R--PYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYA-------IHGTNNNQAIGKWTTL 127 Query: 114 GCYAMTDAQIDEIFAFVRD 132 GC M + I +F + Sbjct: 128 GCIRMYNNDIHWLFERIPQ 146 >gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 199 Score = 49.4 bits (117), Expect = 6e-05 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 29/143 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG--------LGPKRREGDFQ 62 P +P I + ER+L L Y + G + KR D++ Sbjct: 65 PHAPGTIVVSTAERRLYLVLPNGEAL-----RYGVGVGRPGFTWGGTQTITMKREWPDWR 119 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSV 113 P + + PD Y+ I N Y G + IHG+ VS Sbjct: 120 PP-----AEMLRRRPDLPRYMKGGIE--NPLGARAMYLGNTIYRIHGSNEPETIGTAVSS 172 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC MT+ + +++ V+ Sbjct: 173 GCIRMTNEDVADLYGRVKVGARV 195 >gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 231 Score = 49.0 bits (116), Expect = 6e-05 Identities = 31/138 (22%), Positives = 45/138 (32%), Gaps = 19/138 (13%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGF 67 PG P I I + L L + Q I+ Y I G G K + P+ Sbjct: 98 PGRPGGIVIDTNAKFLYLIQ----PAGQAIR-YGIGVGRPGFVWTGTKTITAKREWPDWT 152 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAM 118 + + PD ++A G N Y G L IHG VS GC M Sbjct: 153 PPAEMLRRRPDLPRHMAGGPG--NPLGARAMYLGTSLFRIHGTNEPHTIGQNVSSGCIRM 210 Query: 119 TDAQIDEIFAFVRDAFVG 136 + + +++ Sbjct: 211 MNEDVIDLYERTSVGTRV 228 >gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Bradyrhizobium japonicum USDA 110] Length = 541 Score = 49.0 bits (116), Expect = 6e-05 Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 22/148 (14%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P P+ I + + +K+ ++ + P+ G +P G +SV Sbjct: 89 PQGPLVIVVSIDRQKVTVYDTNG-----VFAESPVSTGMKG---------HSTPMGVFSV 134 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 S Y + + + + + G S GC M A +++ + Sbjct: 135 IQKHKFHHSNIYSGAPMPYMQRITWSGVAMHAGV-LPGYPASHGCIRMPMAFAVKMWNWT 193 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRH 158 + V + P MT + Q Sbjct: 194 KMGAR-------VIVSPGEMTPHSFQHP 214 >ErfK_YbiS_YhnG_Q7MFG2_93-232_PF03734.4 Length = 140 Score = 49.0 bits (116), Expect = 6e-05 Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 39/146 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ ++G + +P+ G +PE S++ + N Sbjct: 6 IVINLAELRLYYFEPELGK----VHVFPVGIGRVG---------RDTPEMVTSIREKRPN 52 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGAC-------- 110 P + Y I P Y Y +IHG Sbjct: 53 PTWTPPASIRKEYREKGIELPKIIPAGPDNPLGEYALRLAYGSGDYLIHGTNKDFGIGLR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M I+ +F+ V Sbjct: 113 VSAGCIRMEPKDIEWLFSQVDKGQRV 138 >ErfK_YbiS_YhnG_Q6ND97_41-173_PF03734.4 Length = 133 Score = 49.0 bits (116), Expect = 6e-05 Identities = 27/145 (18%), Positives = 39/145 (26%), Gaps = 36/145 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP I + ER+L L + ++ YP+ G G + Sbjct: 2 SPGTIVVRTGERRLYL----VVEPGHAVR-YPVGVGKAGKQWA----------GVTKIDG 46 Query: 73 NQLNPDSRYYLAINIGFPNAYD-------------RAHGYTGKYLMIHGAC--------V 111 NP + P D A G IHG V Sbjct: 47 KFRNPAWAPPAEVKRDVPTIPDVIPGGSPANPMGVAAMTLAGGEYAIHGTNRPQSIGGFV 106 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + I +++ V Sbjct: 107 SYGCIRMLNDDITDLYERVPVGTQV 131 >gi|68232378|ref|ZP_00571527.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 132 Score = 49.0 bits (116), Expect = 7e-05 Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 31/135 (22%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ-- 71 P + + + E +L +++ ++ P+ + + +P G + + Sbjct: 9 PFELLVDRSEHQLTIFRDN-----TVVAKLPVGIGTEAI---------PTPTGTFYLTEL 54 Query: 72 --PNQLN-PDSRYYLAINIG-FPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMT 119 P N P + A + F + + +G + +HG VS+GC + Sbjct: 55 LRPGDPNGPWGPF--AFGLSGFSDVITQFNG-AEGIVGLHGTNRPDLVGSDVSMGCVRLR 111 Query: 120 DAQIDEIFAFVRDAF 134 +A + + V Sbjct: 112 NADLLRLVDVVPLGT 126 >gi|7380643|emb|CAB85233.1| hypothetical protein [Neisseria meningitidis Z2491] Length = 358 Score = 49.0 bits (116), Expect = 7e-05 Identities = 24/139 (17%), Positives = 36/139 (25%), Gaps = 36/139 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +++L L+ + +L K YP+ Q+ G + + N Sbjct: 49 VFINIPQQRLFLYT-----DGKLTKVYPVAVGRAMT---------QTNLGEHKIGAKAYN 94 Query: 77 P-----------DSRYYLAINIGFPNAYDRAHGYTGK---YLMIHGACV--------SVG 114 P I G N G L IHG S G Sbjct: 95 PVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHG 154 Query: 115 CYAMTDAQIDEIFAFVRDA 133 C M E + Sbjct: 155 CVRMKSPDALEFAKTIASG 173 >gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 309 Score = 49.0 bits (116), Expect = 7e-05 Identities = 35/192 (18%), Positives = 54/192 (28%), Gaps = 46/192 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I + E +L + A L PI G ++P + + + Sbjct: 98 IVVNVAEMRLYYYPAGTNTVEVL----PIGIGQAG---------RETPRNWVTAVERKQD 144 Query: 76 --------NPDSRYYL------AINIGFP-NAYDRAHGYTGKYLMIHGAC--------VS 112 N Y A+ P N Y G+ IHG VS Sbjct: 145 GPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVS 204 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKP 172 GC + + I +F V VQ+ P + + S + + L Sbjct: 205 QGCIRLRNDDIKYLFDHVPVGTR-----VQIIDRPVKFSVE----PDGSRWLEVHEPLSR 255 Query: 173 GYDYFEQTRKPP 184 FE +K P Sbjct: 256 NRAEFESDKKVP 267 >ErfK_YbiS_YhnG_Q7V8E9_47-190_PF03734.4 Length = 144 Score = 49.0 bits (116), Expect = 7e-05 Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 45/149 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + R+L + + + LIKS+ + G ++P G + V + Sbjct: 6 LVLDRRSRRLLVLE-----DGSLIKSFSVAVGMPGW---------ETPTGEFQVLSKTPH 51 Query: 77 P----------------------DSRYYLAINIGFPNAYDRAHGYTG---------KYLM 105 P +Y N + DR G + Sbjct: 52 PIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRW 111 Query: 106 IHGACVSVGCYAMTDAQIDEIFAFVRDAF 134 G VS GC + + I ++ V+ Sbjct: 112 TVGRAVSHGCVRLFEEDIQSLYRLVKIGT 140 >gi|17133905|dbj|BAB76467.1| all4768 [Nostoc sp. PCC 7120] Length = 171 Score = 48.6 bits (115), Expect = 8e-05 Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 17/127 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I ++L W+ K +L+ S+ I +P G + + Sbjct: 55 QPRRIEIDLSAQRLFAWEGK-----KLVYSFRISTGKRST---------PTPIGQFKINS 100 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P A GY H G VS GC + +++ + Sbjct: 101 KYRTNRMRGPGYDIPNVPYAMYFHRGYAIHGAYWHNRFGTPVSHGCVNLPVKLARKLYNW 160 Query: 130 VRDAFVG 136 + Sbjct: 161 TTPGTLV 167 >gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesorhizobium loti MAFF303099] Length = 376 Score = 48.6 bits (115), Expect = 8e-05 Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 42/155 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + K E ++ + + L+ ++P S + SP G ++V+ Sbjct: 240 GKAVRVEVDKAEGQVRAY----AEDGSLLAAFPATIGSE---------ENPSPSGMHTVR 286 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTG-----KYLMI---------HGACV------ 111 NP Y +N N G + I HG Sbjct: 287 AVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEPSFGIHGTPEPARIDK 346 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 S GC +T+ E+ + P V V Sbjct: 347 TGSHGCVRLTNWDAGELGKLLS-------PGVPVQ 374 >ErfK_YbiS_YhnG_Q89CV1_74-185_PF03734.4 Length = 112 Score = 48.6 bits (115), Expect = 8e-05 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 25/128 (19%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ I I ++++ L+ LI + EG +P G +SV Sbjct: 3 PLQIIISIADQRVSLFDNG-----ALIARSSVSTG--------MEG-HPTPLGVFSVISK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFA 128 Q S Y A + + T + +H G S GC + ++ Sbjct: 49 QRWHRSNIYSAAPMPY------MQRITWSGIALHAGVVPGHPASHGCIRLKSDFAVRLWH 102 Query: 129 FVRDAFVG 136 + Sbjct: 103 LTKRGTRV 110 >gi|15156344|gb|AAK87086.1| AGR_C_2380p [Agrobacterium tumefaciens str. C58] Length = 425 Score = 48.6 bits (115), Expect = 8e-05 Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 25/135 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ++ L L++ ++I + + G ++P G +S+ + Sbjct: 44 ILVSKSDQSLSLYENG-----EIIATSKVSTGKAG---------HETPSGIFSILEKRKY 89 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-GA----CVSVGCYAMTDAQIDEIFAFVR 131 +S Y A P + + ++G + +H G S GC + +F R Sbjct: 90 HESNIYSAA----PMPFMQRLTWSG--IALHEGKVPNYPASHGCVRLPSKFAKSLFGDTR 143 Query: 132 DAFVGGQPSVQVSIY 146 VS+ Sbjct: 144 AGVHVIITDRPVSLR 158 >gi|48848818|ref|ZP_00303063.1| COG1376: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 337 Score = 48.6 bits (115), Expect = 9e-05 Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 35/148 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 I + + L+ + A +L+ + + S E D P G + + Sbjct: 199 QPKAGRIVVSEHAGTLKAFDASN----KLVALFTVTTGS--------EHD-PLPLGNWKI 245 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTG--------------KYLMIHGACV----- 111 + NP RY ++ P++ G ++ IHG Sbjct: 246 YSSSFNPHFRYDASLFWDVPDSKGEHLLPPGPNGPVGVVWIDLSKEHYGIHGTPEPQTIG 305 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC +T+ + V A Sbjct: 306 RTESHGCVRLTNWDAARLALMVDGATKV 333 >ErfK_YbiS_YhnG_Q8PH92_78-212_PF03734.4 Length = 135 Score = 48.6 bits (115), Expect = 9e-05 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 21/130 (16%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ A + ++ +P+ S +G + G + P Y Sbjct: 2 KPAKLVVDKSDSTLRLFDA----DGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVFKY 57 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRA-HGYTGKYLMIHGACV--------SVGCYA 117 + + + + L P L HG S GC Sbjct: 58 NPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPHYGL--HGTPEPGHVGKTESHGCVR 115 Query: 118 MTDAQIDEIF 127 +T+ + + Sbjct: 116 LTNWDVVALA 125 >gi|61101279|ref|ZP_00376735.1| hypothetical protein ELI1976 [Erythrobacter litoralis HTCC2594] Length = 425 Score = 48.6 bits (115), Expect = 9e-05 Identities = 25/144 (17%), Positives = 40/144 (27%), Gaps = 34/144 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 I + K E L+ +K L+ + + S +F P G + + Sbjct: 290 QPEVDRIVVSKSEDTLKAYKGD-----TLVAMFTVSSGSS---------EFPLPLGEWDI 335 Query: 71 QPNQLNPDSRYYLA-INIGFPNAYDRAHGYTG-----------KYLMIHGACV------- 111 NP Y + G Y G G ++ IHG Sbjct: 336 VGEAYNPPYSYDPEVLGQGEGETYTLPPGPNGMVGVVWIDLSKEHYGIHGTPEPETIGRA 395 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAF 134 S GC +T+ + V Sbjct: 396 QSSGCVRLTNWDAARLSQMVSTDT 419 >ErfK_YbiS_YhnG_Q81XG3_27-152_PF03734.4 Length = 126 Score = 48.6 bits (115), Expect = 1e-04 Identities = 18/139 (12%), Positives = 40/139 (28%), Gaps = 46/139 (33%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + IKS+ + +P+G + + N Sbjct: 5 LIVNTQLNKMDYYQNG-----KFIKSFTVATGKAAT---------PTPKGTFKIVNKIKN 50 Query: 77 PDSRYY---------------LAINIGFPNAYDRAHGYTGKYLMIHGACV--------SV 113 YY + + Y + IHG ++ Sbjct: 51 R--PYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYA-------IHGTNNNQAIGKWTTL 101 Query: 114 GCYAMTDAQIDEIFAFVRD 132 GC M + I +F + Sbjct: 102 GCIRMYNNDIHWLFERIPQ 120 >gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesorhizobium loti MAFF303099] Length = 200 Score = 48.2 bits (114), Expect = 1e-04 Identities = 20/140 (14%), Positives = 43/140 (30%), Gaps = 31/140 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY--SV 70 I + K R + + G++ + +P S G + ++P Y Sbjct: 60 IEVDKGARLVRVL--DPSGKW--LAVFPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRF 115 Query: 71 QPNQLNPDSRYYLAINIGFP------NAYDRAHGYTGKYLMIHGAC--------VSVGCY 116 + + +A P + ++G IHG S GC Sbjct: 116 AFKGVKAKRPFTIAAGPNNPVGSVWIDLSIESYG-------IHGTPEPGKIGTTFSHGCI 168 Query: 117 AMTDAQIDEIFAFVRDAFVG 136 +T+ +++ + V+ Sbjct: 169 RLTNWDAEDLASMVQKGTKV 188 >ErfK_YbiS_YhnG_Q6N5E1_100-211_PF03734.4 Length = 112 Score = 48.2 bits (114), Expect = 1e-04 Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 27/129 (20%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 PV I + E++KL ++ A L P+ G +P G +SV Sbjct: 3 PVVIAVSIEQQKLRVYDANG-----LFAETPVSTGMRG---------HSTPMGVFSVIQK 48 Query: 74 QLNPDSRYYLA-INIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIF 127 S+Y+ + I G P Y + T + +H G S GC M +++ Sbjct: 49 -----SKYHRSNIYSGAPMPYMQR--ITWSGIALHAGALPGYPASHGCIRMPMTFAVKMW 101 Query: 128 AFVRDAFVG 136 + R Sbjct: 102 GWTRMGARV 110 >gi|75186790|ref|ZP_00700057.1| COG1376: Uncharacterized protein conserved in bacteria [Escherichia coli E24377A] Length = 311 Score = 48.2 bits (114), Expect = 1e-04 Identities = 24/151 (15%), Positives = 41/151 (27%), Gaps = 37/151 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-- 74 I + E +L + ++ +PI G ++P + + + Sbjct: 99 IVVNVAEMRLYYYPPDSN----TVEVFPIGIGQAG---------RETPRNWVTTVERKQE 145 Query: 75 -------LNPDSRYYL---AINIGFP----NAYDRAHGYTGKYLMIHGAC--------VS 112 N Y ++ P N Y G+ IHG VS Sbjct: 146 APTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVS 205 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 GC + + I +F V V Sbjct: 206 QGCIRLRNDDIKYLFDNVPVGTRVQIIDQPV 236 >gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesorhizobium loti MAFF303099] Length = 243 Score = 48.2 bits (114), Expect = 1e-04 Identities = 31/159 (19%), Positives = 46/159 (28%), Gaps = 43/159 (27%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +E+ P P I I + L L + + Y + G Sbjct: 97 LPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNG-----KARRYGVGTGKPGFEWS------ 145 Query: 62 QSPEGFYSVQPNQLNPD--------------SRY---YLAINIGFP-NAYDRAHGYTGKY 103 G + + + PD RY YLA I P A G T Sbjct: 146 ----GTHKITNKREWPDWRPPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYR 201 Query: 104 LMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAF 134 IHG VS GC M + + +++ V Sbjct: 202 --IHGTNQPWTIGGAVSSGCIRMRNEDVVDLYERVNVGT 238 >gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 193 Score = 48.2 bits (114), Expect = 1e-04 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 42/152 (27%) Query: 1 PVSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P+ +E G+ P I I ER+L L + G+ ++ Y I G Sbjct: 48 PIPRET-VMFEGNYAPGTIVISTRERRLYLVQ----GDGTALR-YGIGVGRDGFRWS--- 98 Query: 59 GDFQSPEGFYSVQPNQ-------------LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM 105 G + + + PD Y+A N Y G L Sbjct: 99 -------GTHRITAKREWPGWTPPAQMLRRRPDLPRYMAGGED--NPLGARAMYLGSTLY 149 Query: 106 -IHGAC--------VSVGCYAMTDAQIDEIFA 128 IHG+ VS GC+ MT+ + +++ Sbjct: 150 RIHGSNEPETIGQAVSSGCFRMTNDDVKDLYD 181 >gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] Length = 348 Score = 47.8 bits (113), Expect = 1e-04 Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 29/127 (22%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL--GPKRREGDFQSPEGF 67 P PV I + E+K +++ I L G K RE +P G Sbjct: 53 SPQGPVTIVVSLTEQKAYIYRNG------------IAIGVSTLSSGKKGRE----TPTGV 96 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQ 122 +S+ ++ S Y + + + + +H G S GC + A Sbjct: 97 FSILQKSVDHKSDLYNSAPMPYMQRLTW------DGIALHAGNLPGYPASHGCIRLPMAF 150 Query: 123 IDEIFAF 129 +++ Sbjct: 151 AKKLYGI 157 >ErfK_YbiS_YhnG_Q89BG8_76-215_PF03734.4 Length = 140 Score = 47.8 bits (113), Expect = 1e-04 Identities = 26/147 (17%), Positives = 39/147 (26%), Gaps = 31/147 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------PKRREGDFQSP 64 I I +L L + Y I GL ++ E +P Sbjct: 1 EPVGTIVIDTAAHQLYLVEGDGKAM-----RYGIGVGKDGLAFAGTATIRRKAEWPHWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLA-------INIGFPNAYDRAHGYTGKYLMIHGA-------- 109 P +LA N P A G IHG Sbjct: 56 TK----NMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGR 111 Query: 110 CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC + + I ++++ V+ Sbjct: 112 AVSSGCIRLINQDIIDLYSRVKIGSRV 138 >gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Brucella suis 1330] Length = 237 Score = 47.8 bits (113), Expect = 2e-04 Identities = 26/158 (16%), Positives = 46/158 (29%), Gaps = 30/158 (18%) Query: 1 PVSKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P + G P I I ++R L L + + Y I GL G Sbjct: 85 PKFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTA-----RRYGIAVGKQGLEFQGKAT 139 Query: 57 REGDFQSPEGFYSVQPNQLNPDS-----RYYLAINIGFPNAYDRA-----HGYTGKYLMI 106 + P + ++ R+ ++ G N G Y+ I Sbjct: 140 ISAKREWPR---WIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRI 196 Query: 107 HGA--CVS------VGCYAMTDAQIDEIFAFVRDAFVG 136 HG + GC+ M + + +++ V Sbjct: 197 HGTVQPWTIGSSASNGCFRMINEDVMDLYDRVTLGTEV 234 >gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinorhizobium meliloti 1021] Length = 327 Score = 47.8 bits (113), Expect = 2e-04 Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 35 GEYQLIKSYPICKWS----GGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP 90 + + +YP S G + +G + P Y N D+ L + G Sbjct: 209 EDGSPLAAYPASIGSEGSPSPTGTHKVKGVARMPPYEYDPDVNFKQGDNDEALTLPKGPN 268 Query: 91 NAYDRAH-GYTGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFV 135 N T IHG S GC +T+ +E+ A V+ V Sbjct: 269 NPVGTVWIDLTEPTYGIHGTPEPSLIDKAQSHGCVRLTNWDAEELAAMVKPGVV 322 >gi|67153406|ref|ZP_00415151.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 317 Score = 47.8 bits (113), Expect = 2e-04 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 49/156 (31%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE----GDFQSPEG 66 PG I I E ++ + ++ +YP+ G G E G + P Sbjct: 90 PGPREGIIINLAEYRMYYFPKDQN----VVHTYPLGIGREGWGSPVAETRITGKIKDP-A 144 Query: 67 FY-----------------SVQPNQL-NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG 108 +Y +V P NP + + + +IHG Sbjct: 145 WYPPKSIREEHAADGDPLPTVVPAGPDNPLGPFKFTLGLS--------------GYLIHG 190 Query: 109 AC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 + VS GC+ M + + ++ V Sbjct: 191 SNKKFGIGMRVSHGCFRMLNHNVLQLADMVPVGTKV 226 >gi|75818411|ref|ZP_00748578.1| COG1376: Uncharacterized protein conserved in bacteria [Vibrio cholerae V51] Length = 306 Score = 47.4 bits (112), Expect = 2e-04 Identities = 28/164 (17%), Positives = 44/164 (26%), Gaps = 43/164 (26%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K G I I E +L ++ G + +P+ G +P Sbjct: 88 PKVAYEG----IVINLAELRLYYFRPNEGK----VHIFPVGIGRIG---------RDTPV 130 Query: 66 GFYSVQPNQLNPD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIH 107 S+ + P + Y A I P Y Y +IH Sbjct: 131 MQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIH 190 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 G VS GC M I+ ++ V + + Sbjct: 191 GTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPI 234 >ErfK_YbiS_YhnG_Q8D0M4_96-235_PF03734.4 Length = 140 Score = 47.4 bits (112), Expect = 2e-04 Identities = 29/147 (19%), Positives = 43/147 (29%), Gaps = 39/147 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + G+ ++I YPI G +P S+ N Sbjct: 6 IVINLAELRLYYY---PKGQNKVI-VYPIGIGQLG---------RDTPTMVTSISQKIPN 52 Query: 77 PD-------SRYYLAINIGFPNA-----------YDRAHGYTGKYLMIHGAC-------- 110 P + YLA I P+ + +IHG Sbjct: 53 PTWTPTANIRKNYLAEGITLPSVVPAGPDNPMGQFALRLSAGRGEYLIHGTNADFGIGLR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 VS GC + I+ +F V Sbjct: 113 VSSGCIRLRPDDIEALFNSVPKGTRVQ 139 >ErfK_YbiS_YhnG_Q9JT27_44-178_PF03734.4 Length = 135 Score = 47.4 bits (112), Expect = 2e-04 Identities = 24/139 (17%), Positives = 36/139 (25%), Gaps = 36/139 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +++L L+ + +L K YP+ Q+ G + + N Sbjct: 6 VFINIPQQRLFLYT-----DGKLTKVYPVAVGRAMT---------QTNLGEHKIGAKAYN 51 Query: 77 P-----------DSRYYLAINIGFPNAYDRAHGYTGK---YLMIHGACV--------SVG 114 P I G N G L IHG S G Sbjct: 52 PVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHG 111 Query: 115 CYAMTDAQIDEIFAFVRDA 133 C M E + Sbjct: 112 CVRMKSPDALEFAKTIASG 130 >gi|69926259|ref|ZP_00623730.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 259 Score = 47.4 bits (112), Expect = 2e-04 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 29/154 (18%) Query: 1 PVSKELKQQLPGSPV--YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P ++ G I I + L L + G+ + ++ Y + G G K Sbjct: 114 PKFEKQLVDYHGKETAGTIVIDTSSKFLYLVQ----GDGKALR-YGVGVGKPGFLWAGVK 168 Query: 56 ----RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG-- 108 ++E +P + PD ++ N Y G L IHG Sbjct: 169 TVTAKKEWPGWTPPAEML----KRRPDLPRHMEGGPQ--NPLGARAMYLGSSLYRIHGSN 222 Query: 109 ------ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + +++ V Sbjct: 223 EPWTIGTNVSSGCIRMRNQDVIDLYGRVHVGARV 256 >gi|67154504|ref|ZP_00416249.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 174 Score = 47.0 bits (111), Expect = 2e-04 Identities = 23/168 (13%), Positives = 46/168 (27%), Gaps = 48/168 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV---- 70 ++ I ++ L + +L+ + + GP R G +P G + V Sbjct: 5 DFLHISLADQALY-----GFADGRLL--LRLAVSTALNGPGERSGSGCTPRGLHQVRAKI 57 Query: 71 --------QPNQLNPDSR-YYLAINIGFPNAYDRAHGY----TG---------------K 102 + ++ FP D +G + Sbjct: 58 GAGLPAGAVLRGRRWTGEVWTPELHEAFPG-RDWILSRILWLSGCEIGRNRLGPVDTFRR 116 Query: 103 YLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 Y+ +HG S GC + +A + E++ V Sbjct: 117 YIYLHGTPDSEPMGVPRSHGCVRLRNADLLELYPRVPLHCRVRIEEAP 164 >gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigella flexneri 2a str. 301] Length = 306 Score = 47.0 bits (111), Expect = 3e-04 Identities = 27/153 (17%), Positives = 40/153 (26%), Gaps = 37/153 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + L PI G +P + + ++ Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKD---------TPINWTTKVEHKKA 147 Query: 76 ----NPDSRY---YLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 P ++ Y A P N Y G+ IHG VS Sbjct: 148 GPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVS 207 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + + I +F V V Sbjct: 208 HGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKA 240 >ErfK_YbiS_YhnG_Q883T0_95-232_PF03734.4 Length = 138 Score = 46.7 bits (110), Expect = 3e-04 Identities = 27/142 (19%), Positives = 40/142 (28%), Gaps = 37/142 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E ++ + ++ +YP+ G G SP G V N Sbjct: 6 IVINLAEYRMYYYPKGQN----VVHTYPLGVGREGWG---------SPIGVTKVTAKTPN 52 Query: 77 PD-------SRYYLAINIGFPNAY----DRAHGYTGKYLM-----IHGACV--------S 112 P + A PN D G L IHG+ S Sbjct: 53 PTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGIGMRTS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAF 134 GC+ M + + E+ Sbjct: 113 HGCFRMYNNNVLELADMAPVGT 134 >gi|24375244|ref|NP_719287.1| LysM domain protein [Shewanella oneidensis MR-1] Length = 304 Score = 46.7 bits (110), Expect = 3e-04 Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 38/164 (23%) Query: 7 KQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + + ++ PI G +PE Sbjct: 87 QLILPNAPREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------TPE 133 Query: 66 GFYS-VQPNQLNPD-------SRYYLAINIGFP--------NAYDRAHGYTGKYLMIHGA 109 + + VQ + NP + Y A P N Y G IHG Sbjct: 134 NWVTSVQRKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIHGT 193 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 VS GC + I+ +F V + + Sbjct: 194 NASFGIGLRVSQGCVRLRHDDIEHLFKTVPIGTRVQFVNQPIKA 237 >ErfK_YbiS_YhnG_Q8YN05_54-169_PF03734.4 Length = 116 Score = 46.7 bits (110), Expect = 3e-04 Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 17/127 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I ++L W+ K +L+ S+ I +P G + + Sbjct: 2 QPRRIEIDLSAQRLFAWEGK-----KLVYSFRISTGKRST---------PTPIGQFKINS 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P A GY H G VS GC + +++ + Sbjct: 48 KYRTNRMRGPGYDIPNVPYAMYFHRGYAIHGAYWHNRFGTPVSHGCVNLPVKLARKLYNW 107 Query: 130 VRDAFVG 136 + Sbjct: 108 TTPGTLV 114 >gi|48730422|ref|ZP_00264169.1| COG1376: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 323 Score = 46.7 bits (110), Expect = 3e-04 Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 41/150 (27%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E +L + ++ ++P+ G G SP ++ Sbjct: 94 PGPREGIVINLAEYRLYYYPKGRN----VVYTFPLGIGREGWG---------SPIAHTTI 140 Query: 71 QPNQLNPD-------SRYYLAINIGFPN-----------AYDRAHGYTGKYLMIHGACV- 111 NP + A PN + G G +IHG+ Sbjct: 141 TAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGY--LIHGSNKK 198 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDAF 134 S GC+ M + + E+ + V Sbjct: 199 FGIGMRTSHGCFRMFNNNVLEMASMVPVGT 228 >ErfK_YbiS_YhnG_Q9I5J7_55-167_PF03734.4 Length = 113 Score = 46.7 bits (110), Expect = 3e-04 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 29/123 (23%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL--GPKRREGDFQSPEGFYSVQ 71 PV I + E+K +++ I L G K RE +P G +S+ Sbjct: 3 PVTIVVSLTEQKAYIYRNG------------IAIGVSTLSSGKKGRE----TPTGVFSIL 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEI 126 ++ S Y + + + + +H G S GC + A ++ Sbjct: 47 QKSVDHKSDLYNSAPMPYMQRLTW------DGIALHAGNLPGYPASHGCIRLPMAFAKKL 100 Query: 127 FAF 129 + Sbjct: 101 YGI 103 >gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii] Length = 299 Score = 46.7 bits (110), Expect = 3e-04 Identities = 38/192 (19%), Positives = 57/192 (29%), Gaps = 46/192 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-- 74 I + E +L + L PI G ++P + + + Sbjct: 98 IIVNAAEMRLYYYPPGSNTVEVL----PIGIGQAG---------RETPRNWVTAVERKQE 144 Query: 75 -----LNPDSRY-YLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 P++R Y A P N Y G+ IHG VS Sbjct: 145 GPTWSPTPNTRRAYAAEGKTLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNSNFGIGLRVS 204 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKP 172 GC + + I +F V VQ+ P ++T S + + L Sbjct: 205 QGCIRLRNNDIKYLFDNVPVGTR-----VQLIDQPVKVTTE----PDGSRWVEVHEPLSR 255 Query: 173 GYDYFEQTRKPP 184 FE TRK P Sbjct: 256 NRAEFESTRKVP 267 >ErfK_YbiS_YhnG_Q87G47_99-238_PF03734.4 Length = 140 Score = 46.7 bits (110), Expect = 4e-04 Identities = 26/146 (17%), Positives = 41/146 (28%), Gaps = 39/146 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + ++ +P+ G +P S+ + N Sbjct: 6 IVINLAELRLYYFPEGED----VVHVFPVGIGRIG---------RDTPVMTTSISQKRPN 52 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGAC-------- 110 P Y A + P + Y +IHG Sbjct: 53 PTWTPPASIRAEYRAKGVDLPAVVPAGPDNPLGLFALRLAYGNGEYLIHGTNKDFGIGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + I+ +F VR Sbjct: 113 VSAGCIRMDPSDIEWLFDKVRRGEKV 138 >gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 306 Score = 46.7 bits (110), Expect = 4e-04 Identities = 27/153 (17%), Positives = 39/153 (25%), Gaps = 37/153 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + L PI G +P + + + Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKD---------TPINWTTKVERKKA 147 Query: 76 ----NPDSRY---YLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 P ++ Y A P N Y G+ IHG VS Sbjct: 148 GPTWTPTAKMHTEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVS 207 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + + I +F V V Sbjct: 208 HGCVRLRNDDIKFLFENVPVGTRVQFIDEPVKA 240 >ErfK_YbiS_YhnG_Q8UFV4_31-142_PF03734.4 Length = 112 Score = 46.7 bits (110), Expect = 4e-04 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 25/107 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ++ L L++ ++I + + G ++P G +S+ + Sbjct: 6 ILVSKSDQSLSLYENG-----EIIATSKVSTGKAG---------HETPSGIFSILEKRKY 51 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-GA----CVSVGCYAM 118 +S Y A P + + ++G + +H G S GC + Sbjct: 52 HESNIYSAA----PMPFMQRLTWSG--IALHEGKVPNYPASHGCVRL 92 >gi|61101139|ref|ZP_00376596.1| hypothetical protein ELI1837 [Erythrobacter litoralis HTCC2594] Length = 315 Score = 46.3 bits (109), Expect = 4e-04 Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 27/121 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 V I I + + ++ + +L +S P+ G ++P G +++ + Sbjct: 66 VVIVISNASQHMHVF-----QDGRLWRSSPVSTGKRG---------KETPTGVFAILQKR 111 Query: 75 LNPDSRYYLA-INIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFA 128 ++ + + P + + T + IH G S GC + +++F Sbjct: 112 R-----FHRSNLYSNAPMPFMQRL--TWDGIAIHAGRLPGYPASHGCIRLPSNFANDLFR 164 Query: 129 F 129 Sbjct: 165 L 165 >gi|52857863|ref|ZP_00341701.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Lactobacillus gasseri] Length = 410 Score = 46.3 bits (109), Expect = 4e-04 Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 37/144 (25%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 ++IR+ +E + + K Y ++ + GG+ K + +P G Y +Q Sbjct: 279 KDLWIRVSLKENRTYIMSGKKP-IYTMLST-------GGVYHKNKSD---TPTGTYHIQH 327 Query: 73 N--------QLNPDSRYYLA--------INIGFPNAYD----RAHGYTGKYLMIHGACVS 112 +LN ++YY++ + P D + + S Sbjct: 328 ERGAAFYNHKLNEGAKYYVSWKDHGVYLFH-SVPTKSDGSIDKKEAKKLGKI-----PGS 381 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVG 136 GC ++ + A V Sbjct: 382 HGCIRLSIPDSKWLAATVPAGTKV 405 >gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacillus clausii KSM-K16] Length = 171 Score = 46.3 bits (109), Expect = 5e-04 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 40/150 (26%) Query: 9 QLPGSPVY------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 Q+PG + + + L L +A E P+ GD + Sbjct: 18 QMPGDTDWEVEKASVIVNVRTNTLALIEANHIAEIH-----PVATGKK--------GD-E 63 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR---------AHGYTGKYLMIHGAC--- 110 +P G ++V P YY NI +A + A G G+ +HG Sbjct: 64 TPLGQFTVLVKVEQP---YYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPG 120 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFV 135 S GC + + I+ ++ + Sbjct: 121 SIGYSASAGCIRLANPTIERLYQKIDIGSK 150 >ErfK_YbiS_YhnG_Q92US7_190-325_PF03734.4 Length = 136 Score = 46.3 bits (109), Expect = 5e-04 Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 35 GEYQLIKSYPICKWS----GGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP 90 + + +YP S G + +G + P Y N D+ L + G Sbjct: 20 EDGSPLAAYPASIGSEGSPSPTGTHKVKGVARMPPYEYDPDVNFKQGDNDEALTLPKGPN 79 Query: 91 NAYDRAH-GYTGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFV 135 N T IHG S GC +T+ +E+ A V+ V Sbjct: 80 NPVGTVWIDLTEPTYGIHGTPEPSLIDKAQSHGCVRLTNWDAEELAAMVKPGVV 133 >gi|68004185|ref|ZP_00536684.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 481 Score = 46.3 bits (109), Expect = 5e-04 Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 34/164 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +R L ++ ++ + + + D+ +P G + + + Sbjct: 274 IVINIPDRTLYYFRNG-----EVDRVLSVAVGKPKPVNDPEKRDWHTPTGNFRIIGKVKD 328 Query: 77 PDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC--------VS 112 P R +I G N + T ++IH S Sbjct: 329 PTWRVPPSIRKEMKERGKEVKTIVPPGKKNPLGKYALKTSIPGILIHSTNAPESVYSFSS 388 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQ 156 GC + +++ F V + G ++ P +MT A Q Sbjct: 389 HGCIRVFPEFMEDFFNSVTEETTG-----EIIYEPVKMTVAEGQ 427 >gi|15074019|emb|CAC45666.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 201 Score = 46.3 bits (109), Expect = 5e-04 Identities = 33/164 (20%), Positives = 51/164 (31%), Gaps = 43/164 (26%) Query: 3 SKELKQQLP----GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 + L+QQ+P P + I E R L L + + Y I GL E Sbjct: 22 PRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGG-----MALRYGIGVGKAGL---EFE 73 Query: 59 GDFQ----------SPEG--------FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT 100 G+ + +P Y ++P R L P A G Sbjct: 74 GEARVGRKAEWPRWTPTSDMVAREPERYGPLAGGMDPGLRNPLG-----PRALYLYQGNR 128 Query: 101 GKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG VS GC + + I ++++ V + Sbjct: 129 DTLFRIHGTTEAWSIGKAVSSGCIRLFNPDIIDLYSRVPEGSRV 172 >gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacterium efficiens YS-314] Length = 403 Score = 46.3 bits (109), Expect = 5e-04 Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 32/141 (22%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF-QSPEGFYSVQPNQLN 76 + + +E++ L+++ P+ R+ D +P G Y + N Sbjct: 246 VVDDNTKTMEVYHNG-----TLLRTIPVSLG--------RDTDEWATPNGIYIIGDR--N 290 Query: 77 PDSRY-YLAINIGFPN-----AYDRAHGYTGKYLMIHGACVS----------VGCYAMTD 120 P +G+ D A + + +H A S GC +T Sbjct: 291 PSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVSHGCINVTT 350 Query: 121 AQIDEIFAFVRDAFVGGQPSV 141 V+ + + Sbjct: 351 EAAQWFQNTVKRGDIVTVKNT 371 >gi|68543641|ref|ZP_00583338.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 304 Score = 46.3 bits (109), Expect = 5e-04 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 37/153 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS-VQPNQL 75 I I E +L + + ++ PI G +PE + + VQ + Sbjct: 98 IVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------TPENWVTSVQRKRA 144 Query: 76 NPD-------SRYYLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 NP + Y A P N Y G IHG VS Sbjct: 145 NPTWTPTPRIRKEYAAKGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIGLRVS 204 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + I+ +F V + + Sbjct: 205 QGCVRLRHEDIEHLFKNVPVGTRVQFVNQPIKA 237 >ErfK_YbiS_YhnG_Q8CVY2_94-231_PF03734.4 Length = 138 Score = 45.9 bits (108), Expect = 5e-04 Identities = 24/145 (16%), Positives = 40/145 (27%), Gaps = 37/145 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-- 74 I + E +L + ++ +PI G ++P + + + Sbjct: 6 IVVNVAEMRLYYYPPDSN----TVEVFPIGIGQAG---------RETPRNWVTTVERKQE 52 Query: 75 -------LNPDSRYYL---AINIGFP----NAYDRAHGYTGKYLMIHGAC--------VS 112 N Y ++ P N Y GK IHG VS Sbjct: 53 APTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGKLYAIHGTNANFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC + + I +F V Sbjct: 113 QGCIRLRNDDIKYLFDNVPVGTRVQ 137 >ErfK_YbiS_YhnG_Q98P76_240-375_PF03734.4 Length = 136 Score = 45.9 bits (108), Expect = 6e-04 Identities = 28/155 (18%), Positives = 46/155 (29%), Gaps = 42/155 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + K E ++ + + L+ ++P S + SP G ++V+ Sbjct: 1 GKAVRVEVDKAEGQVRAY----AEDGSLLAAFPATIGSE---------ENPSPSGMHTVR 47 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGACV------ 111 NP Y +N N G IHG Sbjct: 48 AVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEPSFGIHGTPEPARIDK 107 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 S GC +T+ E+ + P V V Sbjct: 108 TGSHGCVRLTNWDAGELGKLLS-------PGVPVQ 135 >gi|62423671|ref|ZP_00378830.1| COG3786: Uncharacterized protein conserved in bacteria [Brevibacterium linens BL2] Length = 271 Score = 45.5 bits (107), Expect = 8e-04 Identities = 21/128 (16%), Positives = 38/128 (29%), Gaps = 37/128 (28%) Query: 33 MGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN---QLNP------------ 77 G+++ K++ I G RREGD SP G +++ + +P Sbjct: 119 DDGDWKKRKTFDIHNGKKGWLADRREGDKTSPIGVFTLSDAGGYKKDPGTQLPYSQDDRL 178 Query: 78 --------DSRYYLAI----NIGF---PNAYDRAHGYT-----GKYLMIHGACV--SVGC 115 S Y I + P G + +H + GC Sbjct: 179 PSSATVAYGSEYERVFDYIIAIDYNRVPGTPPTDRTRPLGWDKGGGIWLHLDHDSGTNGC 238 Query: 116 YAMTDAQI 123 + + + Sbjct: 239 VTLKEKDL 246 >ErfK_YbiS_YhnG_Q92R37_35-174_PF03734.4 Length = 140 Score = 45.5 bits (107), Expect = 9e-04 Identities = 29/151 (19%), Positives = 43/151 (28%), Gaps = 39/151 (25%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ--------- 62 P + I E R L L + Y I GL EG+ + Sbjct: 1 EPPGTVVIDTENRFLYLVQGGGMAL-----RYGIGVGKAGL---EFEGEARVGRKAEWPR 52 Query: 63 -SPEG--------FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA---- 109 +P Y ++P R L P A G IHG Sbjct: 53 WTPTSDMVAREPERYGPLAGGMDPGLRNPLG-----PRALYLYQGNRDTLFRIHGTTEAW 107 Query: 110 ----CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC + + I ++++ V + Sbjct: 108 SIGKAVSSGCIRLFNPDIIDLYSRVPEGSRV 138 >gi|22959005|ref|ZP_00006665.1| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 183 Score = 45.5 bits (107), Expect = 9e-04 Identities = 23/141 (16%), Positives = 38/141 (26%), Gaps = 34/141 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I R L W + Y I S + + + G+ + ++ Sbjct: 54 AIVADTTSRALHFWSGDG-------RDYRIYPTSVPISEEL------TKRGYTEIVRKKV 100 Query: 76 NPDSRYYLAINIGFP----------NAYDRAHGYTG--KYLMIHGA--------CVSVGC 115 P + +P N Y G Y+ IHG S GC Sbjct: 101 GPSWTPTPSQMERYPDWKPVGPGPENPLGTHAMYLGWPAYI-IHGTHDTRKIGRPSSDGC 159 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 + + +I E+F Sbjct: 160 IGLYNEKIAELFELCPIGTQV 180 >ErfK_YbiS_YhnG_Q57D03_90-229_PF03734.4 Length = 140 Score = 45.1 bits (106), Expect = 0.001 Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 29/145 (20%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 P I I ++R L L + + Y I GL G + P Sbjct: 2 KPGTIVIDPKKRFLYLVETSTTA-----RRYGIAVGKQGLEFQGKATISAKREWPR---W 53 Query: 70 VQPNQLNPDS-----RYYLAINIGFPNAYDRA-----HGYTGKYLMIHGA--CVS----- 112 + ++ R+ ++ G N G Y+ IHG + Sbjct: 54 IPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTIGSSA 113 Query: 113 -VGCYAMTDAQIDEIFAFVRDAFVG 136 GC+ M + + +++ V Sbjct: 114 SNGCFRMINEDVMDLYDRVTLGTEV 138 >gi|71364613|ref|ZP_00655198.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 391 Score = 45.1 bits (106), Expect = 0.001 Identities = 24/136 (17%), Positives = 38/136 (27%), Gaps = 28/136 (20%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + K L + K L+ SYP S SP G ++V Sbjct: 263 PVSRVVADKATETLYAYDDKGI----LVASYPTTVGSTAT---------PSPTGTHTVAV 309 Query: 73 NQLNPDSRYYLA------INIGFPNAYDRAH-GYTGKYLMIHGACV--------SVGCYA 117 P+ Y + G N G + IHG+ S GC Sbjct: 310 KVHEPNYTYTAENGSKSILPPGPNNPVGSVWIGLSKPSYGIHGSPDPARISRQASAGCIR 369 Query: 118 MTDAQIDEIFAFVRDA 133 +T+ + ++ Sbjct: 370 LTNWDALALLGVIQSG 385 >gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 309 Score = 45.1 bits (106), Expect = 0.001 Identities = 22/151 (14%), Positives = 42/151 (27%), Gaps = 37/151 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + ++ + P+ G ++P + + + Sbjct: 102 ILINIAEMRLFYFPKN----FEKVVVLPVGIGEIG---------KETPSKWKTYVKRKKY 148 Query: 76 ----NPDSRYYL---AINI----GFP----NAYDRAHGYTGKYLMIHGAC--------VS 112 P + ++ I +P N Y IHG V+ Sbjct: 149 APTWTPTKDMHKEYSSLGIKLLKIYPSGKNNPMGLYALYLEDLYAIHGTNTNFGIGLRVT 208 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 GC + + I +F V + V Sbjct: 209 HGCIRLRNDDIKYLFNNVPVGTEVYFINEPV 239 >gi|34497388|ref|NP_901603.1| hypothetical protein CV1933 [Chromobacterium violaceum ATCC 12472] Length = 301 Score = 45.1 bits (106), Expect = 0.001 Identities = 21/165 (12%), Positives = 43/165 (26%), Gaps = 63/165 (38%) Query: 10 LPGSPVYI-------RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 +P V + + + +L L+ + +L + +P+ Q Sbjct: 23 MPAPDVAVNPIGRHLVLNLPQARLFLY-----QDGKLARIFPVAVGKMLT---------Q 68 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK-------------------- 102 +P G + + P + ++ P + +GK Sbjct: 69 TPTGSFDITGIYRAP------SWHV--PKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVR 120 Query: 103 ------YLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDA 133 L HG S GC + + E+ V Sbjct: 121 FGESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELARTVSRG 165 >ErfK_YbiS_YhnG_Q6N9D2_60-191_PF03734.4 Length = 132 Score = 45.1 bits (106), Expect = 0.001 Identities = 29/138 (21%), Positives = 46/138 (33%), Gaps = 39/138 (28%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +P I I ER+L L + G+ ++ Y I G G + + Sbjct: 2 APGTIVISTRERRLYLVQ----GDGTALR-YGIGVGRDGFRWS----------GTHRITA 46 Query: 73 NQ-------------LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC-------- 110 + PD Y+A N Y G L IHG+ Sbjct: 47 KREWPGWTPPAQMLRRRPDLPRYMAGGED--NPLGARAMYLGSTLYRIHGSNEPETIGQA 104 Query: 111 VSVGCYAMTDAQIDEIFA 128 VS GC+ MT+ + +++ Sbjct: 105 VSSGCFRMTNDDVKDLYD 122 >gi|15073711|emb|CAC45353.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 246 Score = 44.7 bits (105), Expect = 0.001 Identities = 27/149 (18%), Positives = 37/149 (24%), Gaps = 39/149 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P I I R L L + Y + G G + + Sbjct: 110 EKPGTIVIDTNNRFLYLVTGNGEA-----RRYGVGVGKPGFEWA----------GEHRIT 154 Query: 72 PN--QLNP------------DSRYYLAINIGFP-NAYDRAHGYTGKYLM-IHGAC----- 110 N Y A G P N Y G L IHG Sbjct: 155 RKAEWPNWTPPQEMIAREAARGHYLPARMDGGPENPLGARAMYLGSTLYRIHGTNAPWTI 214 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + +++ V+ Sbjct: 215 GYGVSSGCIRMRNEDVVDLYERVKVGTKV 243 >ErfK_YbiS_YhnG_Q9HZZ0_93-230_PF03734.4 Length = 138 Score = 44.7 bits (105), Expect = 0.001 Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 41/144 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + ++ +YP+ G G SP + + Sbjct: 6 VVINLAEYRLYYYPKGQN----VVHTYPLGIGREGWG---------SPIANTRITAKTKD 52 Query: 77 PDSRYYLA-----------INIGFP-------NAYDRAHGYTGKYLMIHGACV------- 111 P + + P Y G G +IHG+ Sbjct: 53 PAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGY--LIHGSNKKFGIGTR 110 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAF 134 S GC+ M +A + +F+ + Sbjct: 111 TSHGCFRMYNADVTHLFSMISVGT 134 >gi|49610290|emb|CAG73734.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 365 Score = 44.7 bits (105), Expect = 0.001 Identities = 26/153 (16%), Positives = 40/153 (26%), Gaps = 37/153 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + K ++ PI G +P + + + Sbjct: 101 IVINSAEMRLY-YYPKGSKTVVVL---PIGIGELGKD---------TPINWTTSVQRKKA 147 Query: 76 ----NPDSRYYLAINIG-------FP----NAYDRAHGYTGKYLMIHGAC--------VS 112 P ++ + FP N Y G IHG VS Sbjct: 148 GPTWTPTAKMHAEYAARGETLQKVFPAGPDNPMGLYALYIGNLYAIHGTNANFGIGLRVS 207 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + I +F V + V Sbjct: 208 HGCVRLRADDIKYLFNSVPVGTRVQFINEPVKA 240 >gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Bradyrhizobium japonicum USDA 110] Length = 314 Score = 44.7 bits (105), Expect = 0.001 Identities = 29/154 (18%), Positives = 44/154 (28%), Gaps = 29/154 (18%) Query: 1 PVSKELKQQLPGSPV--YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P ++ G I + + L L + Y I G G K Sbjct: 169 PKFEKQLVDYSGKESAGTIVVDTPNKFLYLVEGNGRAM-----RYGIGVGRPGFTWSGVK 223 Query: 56 ----RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG-- 108 +RE +P + PD + + G N Y G L IHG Sbjct: 224 AITAKREWPDWTPPAE-MIARR---PDLPRH--MEGGPENPLGARAMYLGSTLYRIHGSN 277 Query: 109 ------ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + +++ V Sbjct: 278 EPWTIGTNVSSGCIRMRNEDVIDLYGRVNVGTRV 311 >gi|15074524|emb|CAC46170.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti] Length = 193 Score = 44.7 bits (105), Expect = 0.001 Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 26/153 (16%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P + + G SP I + EER L + Y I G K R Sbjct: 41 PRYRRQEVAYYGGESPGTIVVNTEERYLYYVQGGGSAV-----RYGIGVGEEGRTLKGRA 95 Query: 59 GDFQ-------SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY---LMIHG 108 + +P ++ ++ + P + Y G +HG Sbjct: 96 KIGRKAEWPSWTPTAN-MIRRKPHLAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHG 154 Query: 109 AC--------VSVGCYAMTDAQIDEIFAFVRDA 133 VS GC +T+ I ++++ Sbjct: 155 TNEPWTIGQAVSSGCIRLTNDDIVDLYSRTPVG 187 >ErfK_YbiS_YhnG_Q987T4_107-242_PF03734.4 Length = 136 Score = 44.7 bits (105), Expect = 0.001 Identities = 29/148 (19%), Positives = 41/148 (27%), Gaps = 43/148 (29%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I + L L + + Y + G G + + Sbjct: 2 KPGTIVIDTTQNFLYLVEKNG-----KARRYGVGTGKPGFEWS----------GTHKITN 46 Query: 73 NQLNPD--------------SRY---YLAINIGFP-NAYDRAHGYTGKYLMIHGAC---- 110 + PD RY YLA I P A G T IHG Sbjct: 47 KREWPDWRPPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYR--IHGTNQPWT 104 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC M + + +++ V Sbjct: 105 IGGAVSSGCIRMRNEDVVDLYERVNVGT 132 >ErfK_YbiS_YhnG_Q8Z5P0_93-230_PF03734.4 Length = 138 Score = 44.4 bits (104), Expect = 0.002 Identities = 26/145 (17%), Positives = 39/145 (26%), Gaps = 37/145 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I + E +L + A L PI G ++P + + + Sbjct: 6 IVVNVAEMRLYYYPAGTNTVEVL----PIGIGQAG---------RETPRNWVTAVERKQD 52 Query: 76 --------NPDSRYYL------AINIGFP-NAYDRAHGYTGKYLMIHGAC--------VS 112 N Y A+ P N Y G+ HG VS Sbjct: 53 GPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC + + I +F VR Sbjct: 113 QGCIRLRNDDIKYLFDHVRVGTRVQ 137 >ErfK_YbiS_YhnG_Q7NWP8_32-170_PF03734.4 Length = 139 Score = 44.4 bits (104), Expect = 0.002 Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 56/151 (37%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + +L L+ + +L + +P+ Q+P G + + Sbjct: 6 LVLNLPQARLFLY-----QDGKLARIFPVAVGKMLT---------QTPTGSFDITGIYRA 51 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGK--------------------------YLMIHGAC 110 P + ++ P + +GK L HG Sbjct: 52 P------SWHV--PKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRFGESSLGLGFHGTN 103 Query: 111 V--------SVGCYAMTDAQIDEIFAFVRDA 133 S GC + + E+ V Sbjct: 104 APGSVPGFRSHGCVRLRNDDALELARTVSRG 134 >gi|15074222|emb|CAC45869.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 408 Score = 44.4 bits (104), Expect = 0.002 Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 26/111 (23%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + ++++ L ++ ++ + + G +P G +S+ Sbjct: 27 PLQVVVSRDQQSLVVYDGD-----TVVATSKVSTGKAG---------HATPTGIFSILEK 72 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA------CVSVGCYAM 118 + +S Y P + + ++G + +HG+ S GC + Sbjct: 73 RRRHESNIYS----NAPMPFMQRLTWSG--IALHGSNHVPDYPASHGCVRL 117 >gi|22294409|dbj|BAC08239.1| tsr0688 [Thermosynechococcus elongatus BP-1] Length = 84 Score = 44.4 bits (104), Expect = 0.002 Identities = 23/102 (22%), Positives = 32/102 (31%), Gaps = 26/102 (25%) Query: 48 WSGG-LGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINI-GFPNAYDRAHGYTGKYLM 105 W G G Q+P G + S + + G PN H Sbjct: 7 WKNPFTGAVIAGGHPQNPLGRRWIGF-----WSDGTNWVGLHGTPNPDSIGHA------- 54 Query: 106 IHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 VS GC M + I+E+F V+ V V + P Sbjct: 55 -----VSHGCVRMYNRDIEELFEKVQLG-------VPVIVVP 84 >gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5] Length = 330 Score = 44.4 bits (104), Expect = 0.002 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 41/150 (27%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E +L + ++ ++P+ G G SP S+ Sbjct: 100 PGPREGIVINLAEYRLYYYPKGRN----VVYTFPLGIGREGWG---------SPIAHTSI 146 Query: 71 QPNQLNPD-------SRYYLAINIGFPN-----------AYDRAHGYTGKYLMIHGACV- 111 NP + A PN + G G +IHG+ Sbjct: 147 TAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGY--LIHGSNKK 204 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDAF 134 S GC+ M + + E+ V Sbjct: 205 FGIGMRTSHGCFRMLNNNVLEMAGMVPVGT 234 >ErfK_YbiS_YhnG_Q92KL8_110-245_PF03734.4 Length = 136 Score = 44.4 bits (104), Expect = 0.002 Identities = 27/149 (18%), Positives = 37/149 (24%), Gaps = 39/149 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P I I R L L + Y + G G + + Sbjct: 1 EKPGTIVIDTNNRFLYLVTGNGEA-----RRYGVGVGKPGFEWA----------GEHRIT 45 Query: 72 PN--QLNP------------DSRYYLAINIGFP-NAYDRAHGYTGKYLM-IHGAC----- 110 N Y A G P N Y G L IHG Sbjct: 46 RKAEWPNWTPPQEMIAREAARGHYLPARMDGGPENPLGARAMYLGSTLYRIHGTNAPWTI 105 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + +++ V+ Sbjct: 106 GYGVSSGCIRMRNEDVVDLYERVKVGTKV 134 >gi|10173425|dbj|BAB04530.1| BH0811 [Bacillus halodurans C-125] Length = 152 Score = 44.0 bits (103), Expect = 0.002 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 12/68 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L + +++K YPI ++P G + + Sbjct: 56 PYRIDVSTNRRTLTL---RTQPAGEVVKVYPIAVGRIL---------HETPVGEFIIINK 103 Query: 74 QLNPDSRY 81 NP + Sbjct: 104 APNPGGPF 111 >ErfK_YbiS_YhnG_Q92PX9_54-192_PF03734.4 Length = 139 Score = 44.0 bits (103), Expect = 0.002 Identities = 24/140 (17%), Positives = 41/140 (29%), Gaps = 24/140 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ-------SP 64 SP I + EER L + Y I G K R + +P Sbjct: 1 ESPGTIVVNTEERYLYYVQGGGSAV-----RYGIGVGEEGRTLKGRAKIGRKAEWPSWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY---LMIHGAC--------VSV 113 ++ ++ + P + Y G +HG VS Sbjct: 56 TAN-MIRRKPHLAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQAVSS 114 Query: 114 GCYAMTDAQIDEIFAFVRDA 133 GC +T+ I ++++ Sbjct: 115 GCIRLTNDDIVDLYSRTPVG 134 >gi|1742774|dbj|BAA15464.1| Probable carnitine operon oxidoreductase CaiA (EC 1.3.99.-). [Escherichia coli] Length = 500 Score = 43.6 bits (102), Expect = 0.003 Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 39/144 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E +L + +++ YPI GL ++P V N Sbjct: 98 IIVNLAELRLYYYPPGEN----IVQVYPIGIGLQGL---------ETPVMETRVGQKIPN 144 Query: 77 PD-------SRYYLAINIGFP--------NAYDRA---HGYTGKYLMIHGA--------C 110 P + L I P N R + +IHG Sbjct: 145 PTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLR 204 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC M I +F+ VR Sbjct: 205 VSSGCIRMNAPDIKALFSSVRTGT 228 >ErfK_YbiS_YhnG_Q9KEP1_54-138_PF03734.4 Length = 85 Score = 43.6 bits (102), Expect = 0.003 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 12/68 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L + +++K YPI ++P G + + Sbjct: 3 PYRIDVSTNRRTLTL---RTQPAGEVVKVYPIAVGRIL---------HETPVGEFIIINK 50 Query: 74 QLNPDSRY 81 NP + Sbjct: 51 APNPGGPF 58 >gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 187 Score = 43.6 bits (102), Expect = 0.003 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 44/159 (27%) Query: 1 PVSK---ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 P+ + + + +P + I ER+L L Q ++ Y I G Sbjct: 42 PIPRQLVYFQSRY--APGTVVIRTGERRLYLVLPG----GQALR-YGIGVGRDGFRWS-- 92 Query: 58 EGDFQSPEGFYSVQPNQ-------------LNPDSRYYLAINIGFPNAYDRAHGYTGKYL 104 G + + + PD + G N Y G L Sbjct: 93 --------GVHRISAKKEWPSWTPPAQMLRRRPDLP--RFMRGGLENPLGARAMYLGSTL 142 Query: 105 M-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAF 134 IHG+ VS GC+ MT+ + +++ V Sbjct: 143 YRIHGSNEPETIGQAVSSGCFRMTNDDVVDLYNRVSVGT 181 >ErfK_YbiS_YhnG_Q89DB0_182-313_PF03734.4 Length = 132 Score = 43.6 bits (102), Expect = 0.003 Identities = 27/137 (19%), Positives = 40/137 (29%), Gaps = 27/137 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK----RREGDFQSPEGFY 68 I + + L L + Y I G G K +RE +P Sbjct: 5 TIVVDTPNKFLYLVEGNGRAM-----RYGIGVGRPGFTWSGVKAITAKREWPDWTPPAE- 58 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG--------ACVSVGCYAMT 119 + PD + + G N Y G L IHG VS GC M Sbjct: 59 MIARR---PDLPRH--MEGGPENPLGARAMYLGSTLYRIHGSNEPWTIGTNVSSGCIRMR 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + +++ V Sbjct: 114 NEDVIDLYGRVNVGTRV 130 >ErfK_YbiS_YhnG_Q89MP2_90-201_PF03734.4 Length = 112 Score = 43.6 bits (102), Expect = 0.003 Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 15/123 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ I + + +K+ ++ + P+ G +P G +SV Sbjct: 3 PLVIVVSIDRQKVTVYDTNG-----VFAESPVSTGMKG---------HSTPMGVFSVIQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 S Y + + + + + G S GC M A +++ + + Sbjct: 49 HKFHHSNIYSGAPMPYMQRITWSGVAMHAGV-LPGYPASHGCIRMPMAFAVKMWNWTKMG 107 Query: 134 FVG 136 Sbjct: 108 ARV 110 >ErfK_YbiS_YhnG_Q5PG17_96-233_PF03734.4 Length = 138 Score = 43.6 bits (102), Expect = 0.003 Identities = 26/145 (17%), Positives = 38/145 (26%), Gaps = 37/145 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + L PI G +P + + + Sbjct: 6 IIINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKD---------TPINWTTKVERKKA 52 Query: 76 ----NPDSRY---YLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 P ++ Y A P N Y G+ IHG VS Sbjct: 53 GPTWTPTAKMHTEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC + + I +F V Sbjct: 113 HGCVRLRNDDIKFLFENVPVGTRVQ 137 >gi|69930975|ref|ZP_00627615.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 320 Score = 43.6 bits (102), Expect = 0.003 Identities = 27/142 (19%), Positives = 44/142 (30%), Gaps = 35/142 (24%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q+P + + K+ + ++L+ G LI YP S + S G Sbjct: 161 QIPKKAAKVEVDKKRQTVKLFDKSNG----LIGFYPATVGSE---------EKPSLSGTL 207 Query: 69 SVQPNQLNPDSRYYLA-------------INIGFPNAYDRAH-GYTGKYLMIHGACV--- 111 V + NP Y A I G N +G+ +HG Sbjct: 208 KVTTVKRNPTYHYNPAYYFGGVHSRKPFTIAPGPNNPVGTVWISLSGEGYGVHGTSSPGK 267 Query: 112 -----SVGCYAMTDAQIDEIFA 128 S GC +T+ + + Sbjct: 268 VSKSESHGCIRLTNWDAERVAE 289 >gi|12515680|gb|AAG56665.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933] Length = 334 Score = 43.6 bits (102), Expect = 0.003 Identities = 37/202 (18%), Positives = 56/202 (27%), Gaps = 55/202 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E +L + + + YPI GL ++P V N Sbjct: 98 IIVNLAELRLYYYPPGEN----IXQVYPIGIGLQGL---------ETPVMETRVGQKIPN 144 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGA--------C 110 P + L I P Y + +IHG Sbjct: 145 PTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLR 204 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV--SIYPFRM---------TDANMQRHR 159 VS GC M I +F+ VR + V S+ P M + Q + Sbjct: 205 VSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQ 264 Query: 160 NSPNYDFWKQLKPGYDYFEQTR 181 P L G+ F+ + Sbjct: 265 TMPY-----TLPAGFTQFKDNK 281 >gi|17936219|ref|NP_533009.1| hypothetical protein Atu2336 [Agrobacterium tumefaciens str. C58] Length = 205 Score = 43.6 bits (102), Expect = 0.003 Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 30/142 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD----FQS--PEGFYS 69 + + R+L + Y + GL K GD +S P + Sbjct: 68 TVVVDTPARRLYYVMGEGRAM-----RYGVGVGRQGLALK---GDAYIGRKSEWPSWTPT 119 Query: 70 VQPNQLNP-DSRYYLAINIGFPN----AYDRAHGYTGKYLM--IHGAC--------VSVG 114 + +P + ++ + G PN A G M +HG +S G Sbjct: 120 ANMMRRDPRNLKFAGGMPGG-PNNPLGARALYLYRGGNDTMFRLHGTNQPQSIGHAMSSG 178 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C M + I ++++ V Sbjct: 179 CIRMLNHDIIDLYSRVPVGSRV 200 >gi|26989044|ref|NP_744469.1| hypothetical protein PP2320 [Pseudomonas putida KT2440] Length = 325 Score = 43.2 bits (101), Expect = 0.003 Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 23/141 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR--REGDFQSPEGFY 68 PG I I E ++ + ++ ++P+ G G ++P + Sbjct: 94 PGPREGIVINLAEYRMYYFPKGES----VVYTFPLGIGREGWGSPIANTRITAKTPNPTW 149 Query: 69 SVQPNQLNPDSRYYLAINIGFP-------NAYDRAHGYTGKYLMIHGACV--------SV 113 + + + + P + G G +IHG+ S Sbjct: 150 TPPASIRKEHAEDGDILPTVVPAGPDNPLGPFKFTLGVPGY--LIHGSNKKFGIGMRTSH 207 Query: 114 GCYAMTDAQIDEIFAFVRDAF 134 GC+ M + + E+ V Sbjct: 208 GCFRMFNNNVLELSKMVPVGT 228 >ErfK_YbiS_YhnG_Q5WH69_27-153_PF03734.4 Length = 127 Score = 43.2 bits (101), Expect = 0.003 Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 34/136 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + L L +A E P+ GD ++P G ++V Sbjct: 6 VIVNVRTNTLALIEANHIAEIH-----PVATGKK--------GD-ETPLGQFTVLVKVEQ 51 Query: 77 PDSRYYLAINIGFPNAYDR---------AHGYTGKYLMIHGAC--------VSVGCYAMT 119 P YY NI +A + A G G+ +HG S GC + Sbjct: 52 P---YYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPGSIGYSASAGCIRLA 108 Query: 120 DAQIDEIFAFVRDAFV 135 + I+ ++ + Sbjct: 109 NPTIERLYQKIDIGSK 124 >ErfK_YbiS_YhnG_Q8D2K2_98-234_PF03734.4 Length = 137 Score = 43.2 bits (101), Expect = 0.004 Identities = 21/144 (14%), Positives = 40/144 (27%), Gaps = 37/144 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + ++ + P+ G ++P + + + Sbjct: 5 ILINIAEMRLFYFPKN----FEKVVVLPVGIGEIG---------KETPSKWKTYVKRKKY 51 Query: 76 ----NPDSRYYL---AINI----GFP----NAYDRAHGYTGKYLMIHGAC--------VS 112 P + ++ I +P N Y IHG V+ Sbjct: 52 APTWTPTKDMHKEYSSLGIKLLKIYPSGKNNPMGLYALYLEDLYAIHGTNTNFGIGLRVT 111 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVG 136 GC + + I +F V Sbjct: 112 HGCIRLRNDDIKYLFNNVPVGTEV 135 >ErfK_YbiS_YhnG_Q8EAY9_93-230_PF03734.4 Length = 138 Score = 43.2 bits (101), Expect = 0.004 Identities = 29/145 (20%), Positives = 42/145 (28%), Gaps = 37/145 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS-VQPNQL 75 I I E +L + + ++ PI G +PE + + VQ + Sbjct: 6 IVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------TPENWVTSVQRKRA 52 Query: 76 NPD-------SRYYLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 NP + Y A P N Y G IHG VS Sbjct: 53 NPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC + I+ +F V Sbjct: 113 QGCVRLRHDDIEHLFKTVPIGTRVQ 137 >ErfK_YbiS_YhnG_Q8DL11_2-82_PF03734.4 Length = 81 Score = 43.2 bits (101), Expect = 0.004 Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 19/88 (21%) Query: 48 WSGG-LGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINI-GFPNAYDRAHGYTGKYLM 105 W G G Q+P G + S + + G PN H Sbjct: 6 WKNPFTGAVIAGGHPQNPLGRRWIGF-----WSDGTNWVGLHGTPNPDSIGHA------- 53 Query: 106 IHGACVSVGCYAMTDAQIDEIFAFVRDA 133 VS GC M + I+E+F V+ Sbjct: 54 -----VSHGCVRMYNRDIEELFEKVQLG 76 >ErfK_YbiS_YhnG_Q92KF1_25-137_PF03734.4 Length = 113 Score = 43.2 bits (101), Expect = 0.004 Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 26/111 (23%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + ++++ L ++ ++ + + G +P G +S+ Sbjct: 3 PLQVVVSRDQQSLVVYDGD-----TVVATSKVSTGKAG---------HATPTGIFSILEK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA------CVSVGCYAM 118 + +S Y P + + ++G + +HG+ S GC + Sbjct: 49 RRRHESNIYS----NAPMPFMQRLTWSG--IALHGSNHVPDYPASHGCVRL 93 >ErfK_YbiS_YhnG_Q8FMX7_240-368_PF03734.4 Length = 129 Score = 43.2 bits (101), Expect = 0.004 Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 32/137 (23%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF-QSPEGFYSVQPNQLN 76 + + +E++ L+++ P+ R+ D +P G Y + N Sbjct: 7 VVDDNTKTMEVYHNG-----TLLRTIPVSLG--------RDTDEWATPNGIYIIGDR--N 51 Query: 77 PDSRY-YLAINIGFPN-----AYDRAHGYTGKYLMIHGACVS----------VGCYAMTD 120 P +G+ D A + + +H A S GC +T Sbjct: 52 PSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVSHGCINVTT 111 Query: 121 AQIDEIFAFVRDAFVGG 137 V+ + Sbjct: 112 EAAQWFQNTVKRGDIVT 128 >gi|67938515|ref|ZP_00531039.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 270 Score = 43.2 bits (101), Expect = 0.004 Identities = 23/142 (16%), Positives = 41/142 (28%), Gaps = 25/142 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 PV E P + + ER++ ++ + +L+ P+ Sbjct: 139 PVDIEKASAYVPIPQVLDDSRGEREIRVYLDQQYFGAYEDGKLLFWGPVSSGKK------ 192 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 + G + V Q Y + I + NA IH G Sbjct: 193 ---SRPTWPGKFFVNYKQR-----YKRS--IKYHNAPMPYSINYSGGYFIHEQSLPGYPA 242 Query: 112 SVGCYAMTDAQIDEIFAFVRDA 133 S GC + ++F +V Sbjct: 243 SHGCIRLLMTDAKKLFNWVTIG 264 >gi|67918178|ref|ZP_00511779.1| ErfK/YbiS/YcfS/YnhG [Chlorobium limicola DSM 245] Length = 270 Score = 43.2 bits (101), Expect = 0.004 Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 31/143 (21%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 P+ + + P + + ER++ ++ + +L+ P+ Sbjct: 136 PIDVQKASRYVPVPELLANSRGEREIRIFLDRQYFGAYEKGRLLFWGPVSSGRK------ 189 Query: 57 REGDFQSPEGFYSVQPNQLNPDS-RYYLA---INIGFPNAYDRAHGYTGKYLM----IHG 108 +++P G + V Q + S +Y A +I F G Y M + G Sbjct: 190 ---TYRTPPGKFFVNYKQRHKLSIKYDNAPMPFSINF----------YGGYFMHQQSLPG 236 Query: 109 ACVSVGCYAMTDAQIDEIFAFVR 131 S GC + +++F +V+ Sbjct: 237 YPASHGCVRLLMTDAEKLFNWVK 259 >gi|56413653|ref|YP_150728.1| putative LysM domain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 333 Score = 43.2 bits (101), Expect = 0.004 Identities = 33/177 (18%), Positives = 47/177 (26%), Gaps = 47/177 (26%) Query: 1 PVSKE------LKQQLPGSPVY--IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K Q L + + E +L + ++ YPI GL Sbjct: 74 PVPKPGTLITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENR----VQVYPIGIGLQGL 129 Query: 53 GPKRREGDFQSPEGFYSVQPNQLNP-------DSRYYLAINIGFP-----------NAYD 94 ++P + NP + L I P Y Sbjct: 130 ---------ETPVMDTRIGQKIPNPMWTPTAGIRQRSLERGITLPPVIPAGPNNPLGRYA 180 Query: 95 RAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 + +IHG VS GC M I +FA VR + V Sbjct: 181 LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPV 237 >gi|15073891|emb|CAC45532.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 242 Score = 43.2 bits (101), Expect = 0.004 Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 31/154 (20%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRRE 58 +E+ +P I + +R L L + Y + G G + Sbjct: 90 YRQEVGDPFGEAPGTIVVDTADRYLYLVQPGGRAM-----RYGVGLGREGFAWSGRGLIQ 144 Query: 59 GDFQSPEGFYSVQPNQLN---PDSRYYLAINIGFPNAYDRAHGYTGKYLM---------I 106 + P+ PN++ P Y A N G P D G Y+ + Sbjct: 145 WKQKWPK---WTPPNEMIARQPVLAKYSADNGGMPPGLDNPLGSRALYIFQNGQDTLYRV 201 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRD 132 HG VS GC M + + +++ VR+ Sbjct: 202 HGTPEWQSIGKAVSSGCVRMVNQDVIDLYDRVRN 235 >ErfK_YbiS_YhnG_Q6NAN8_135-266_PF03734.4 Length = 132 Score = 42.8 bits (100), Expect = 0.005 Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 25/136 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFYSVQP 72 I I + L L + G+ + ++ Y + G G K + P P Sbjct: 5 TIVIDTPNKFLYLVQ----GDGKALR-YGVGVGRPGFTWSGVKTITAKREWPA---WTPP 56 Query: 73 NQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG--------ACVSVGCYAMTD 120 + PD ++ N Y G L IHG VS GC M + Sbjct: 57 KEMLARRPDLPRHMEGGPA--NPLGARAMYLGSSLYRIHGSNEPWTIGTNVSSGCIRMRN 114 Query: 121 AQIDEIFAFVRDAFVG 136 + +++ V Sbjct: 115 EDVIDLYGRVGVGTKV 130 >gi|15025657|gb|AAK80578.1| Uncharacterized protein, ErfK family [Clostridium acetobutylicum ATCC 824] Length = 229 Score = 42.8 bits (100), Expect = 0.005 Identities = 19/136 (13%), Positives = 47/136 (34%), Gaps = 23/136 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P+ I + E++++ ++ AK +L+ S+ G +P+G Y++ Sbjct: 104 AEKPLRIDVDLEKQRVNIYDAKS----RLVNSFVCSSGMNGYD---------TPKGEYTI 150 Query: 71 QPN-------QLNPDSRYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 + + N + Y++ + +D+ + G S GC + Sbjct: 151 KERGYSFYSQKYNEGAYYWVQFMGNYLFHSVPFDKNKNIEPNEVNKLGNKASHGCIRLPI 210 Query: 121 AQIDEIFAFVRDAFVG 136 I+ + + Sbjct: 211 DNAKWIYDNIPRGTLV 226 >gi|71838162|ref|ZP_00677923.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 192 Score = 42.8 bits (100), Expect = 0.005 Identities = 30/165 (18%), Positives = 47/165 (28%), Gaps = 38/165 (23%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 S++ P +P I I L L++ G+ + Y + GL Sbjct: 32 TSQDPAASRPAAPYIIEISISRTLLTLYERHGTGKMFPVAQYRVGSAMRGLTTY------ 85 Query: 62 QSPEGFYSVQPNQLNPD-------SRYYLAINIGFPNA---------------YDRAHGY 99 P G V Q +P + + I P A + Sbjct: 86 --PLGPGRVTAIQFDPWWHPTAYSRQVFRERGISLPRAVPPGHPLNYMGPFKISLSHRTW 143 Query: 100 TGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 G IHG V+ GC+ M + E+ +R V Sbjct: 144 KGAIYRIHGNNNPRRVGRRVTGGCFVMHNRDGLELARRIRVGTVV 188 >ErfK_YbiS_YhnG_Q9KNA7_90-229_PF03734.4 Length = 140 Score = 42.4 bits (99), Expect = 0.006 Identities = 26/146 (17%), Positives = 40/146 (27%), Gaps = 39/146 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ G + +P+ G +P S+ + Sbjct: 6 IVINLAELRLYYFRPNEGK----VHIFPVGIGRIG---------RDTPVMQTSISSKRKY 52 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGAC-------- 110 P + Y A I P Y Y +IHG Sbjct: 53 PTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIHGTNKDFGVGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M I+ ++ V Sbjct: 113 VSAGCIRMDPKDIEWLYQQVERGEKV 138 >gi|15155625|gb|AAK86477.1| AGR_C_1197p [Agrobacterium tumefaciens str. C58] Length = 275 Score = 42.4 bits (99), Expect = 0.007 Identities = 28/159 (17%), Positives = 40/159 (25%), Gaps = 39/159 (24%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + + + Q P I I R L L A + Y + G Sbjct: 129 LPQIVSYQTAEKPGTIVIDTPNRFLYLVLADG-----KARRYGVGVGKPGFEWA------ 177 Query: 62 QSPEGFYSVQPN--QLNPD------------SRYYLAINIGFP-NAYDRAHGYTGKYLM- 105 G + V + Y A G P N Y G L Sbjct: 178 ----GTHKVTRKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYR 233 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG S GC M + + +++ V Sbjct: 234 IHGTNQPWTIGSNNSSGCIRMRNEDVTDLYERVNVGTRV 272 >ErfK_YbiS_YhnG_Q8UCZ2_64-202_PF03734.4 Length = 139 Score = 42.0 bits (98), Expect = 0.008 Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 30/142 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD----FQS--PEGFYS 69 + + R+L + Y + GL K GD +S P + Sbjct: 5 TVVVDTPARRLYYVMGEGRAM-----RYGVGVGRQGLALK---GDAYIGRKSEWPSWTPT 56 Query: 70 VQPNQLNP-DSRYYLAINIGFPN----AYDRAHGYTGKYLM--IHGAC--------VSVG 114 + +P + ++ + G PN A G M +HG +S G Sbjct: 57 ANMMRRDPRNLKFAGGMPGG-PNNPLGARALYLYRGGNDTMFRLHGTNQPQSIGHAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C M + I ++++ V Sbjct: 116 CIRMLNHDIIDLYSRVPVGSRV 137 >gi|68247205|gb|EAN29293.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 362 Score = 42.0 bits (98), Expect = 0.008 Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 47/156 (30%) Query: 25 KLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLA 84 ++ L+ + G ++++P+ REG F +P + + P +Y+ Sbjct: 141 EMRLYHRRADGR---LETFPVGIG--------REG-FDTPISRAKIIRKKSAP--SWYVP 186 Query: 85 INIGFPNAYDRAHGYTGK--------------YLMIHGAC--------VSVGCYAMTDAQ 122 +I N A G +IHG VS GC M Sbjct: 187 ASIREENPKLPAVIPPGASNPLGSHAIYLSLPGYLIHGTNKPYGIGRRVSHGCIRMYPED 246 Query: 123 IDEIFAFVRDAFVGGQPSVQ-----------VSIYP 147 I ++ R + + IYP Sbjct: 247 IPRLYTSARVGATVAIVNEPAKAGWFGDNLLLEIYP 282 >ErfK_YbiS_YhnG_Q8UHL1_122-257_PF03734.4 Length = 136 Score = 42.0 bits (98), Expect = 0.008 Identities = 27/149 (18%), Positives = 36/149 (24%), Gaps = 39/149 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P I I R L L A + Y + G G + V Sbjct: 1 EKPGTIVIDTPNRFLYLVLADG-----KARRYGVGVGKPGFEWA----------GTHKVT 45 Query: 72 PN--QLNPD------------SRYYLAINIGFP-NAYDRAHGYTGKYLM-IHGAC----- 110 + Y A G P N Y G L IHG Sbjct: 46 RKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTI 105 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + +++ V Sbjct: 106 GSNNSSGCIRMRNEDVTDLYERVNVGTRV 134 >gi|66856700|ref|ZP_00400762.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C] Length = 284 Score = 42.0 bits (98), Expect = 0.008 Identities = 27/150 (18%), Positives = 44/150 (29%), Gaps = 37/150 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + E +L A G + ++P+ G G +P G +V+ + Sbjct: 88 TVVVNLSEMRLYYLPAGPG----PLLTFPV-------GVAVEAG--ATPLGVLTVEQKLV 134 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGAC--------VSV 113 +P +Y I + A G L+IHG VS Sbjct: 135 SP--SWYPTPAIRREDPELPAAVPPGPDNPLGSHALRLSAPTLLIHGTNRPYGVGRRVSH 192 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 GC + I + VR V Sbjct: 193 GCIRLYPEDIPRLHRAVRLGTPVAIVREPV 222 >gi|71837344|ref|ZP_00677109.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 441 Score = 42.0 bits (98), Expect = 0.008 Identities = 29/143 (20%), Positives = 45/143 (31%), Gaps = 36/143 (25%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 LP +P I I + L+ K G Q++ +YP+ + D +P G Sbjct: 118 LPDAPRKGIVINLA--TMRLFHYKGSGTAQVVSTYPVGVGAE---------DRPTPPGPT 166 Query: 69 SVQPNQLNPD-------SRYYL--------AINIGFPNAYDRAHGYTGK-YLMIHGAC-- 110 V P + + +I G N Y GK +IHG Sbjct: 167 RVVRKAAKPTWHVPASIAERHRMKGDILPASIPPGPDNPLGEYALYLGKAGYLIHGTNKP 226 Query: 111 ------VSVGCYAMTDAQIDEIF 127 + GC + I +F Sbjct: 227 ASVGLQATNGCMRLYPENIKTLF 249 >ErfK_YbiS_YhnG_Q6N0G6_60-191_PF03734.4 Length = 132 Score = 42.0 bits (98), Expect = 0.009 Identities = 25/147 (17%), Positives = 41/147 (27%), Gaps = 39/147 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +P I + ER L L + Y I G + +G + Sbjct: 1 EAPGTIIVQTSERYLYLVQGNNRAL-----RYGIGVGREGF----------TWQGLLKIS 45 Query: 72 PN-------------QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC------- 110 Q P + G N Y G + IHG Sbjct: 46 RKAEWPDWVPPPEMIQRQPYLP--RFMAGGPGNPLGARAMYLGSTVYRIHGTNRPDTIGT 103 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC+ + +A + +++A V Sbjct: 104 AISSGCFRLVNADVMDLYARVPVGTKV 130 >ErfK_YbiS_YhnG_Q8KR47_93-230_PF03734.4 Length = 138 Score = 42.0 bits (98), Expect = 0.009 Identities = 26/145 (17%), Positives = 40/145 (27%), Gaps = 37/145 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-- 74 I + E +L + L PI G ++P + + + Sbjct: 6 IIVNAAEMRLYYYPPGSNTVEVL----PIGIGQAG---------RETPRNWVTAVERKQE 52 Query: 75 -----LNPDSRY-YLAINIGFP--------NAYDRAHGYTGKYLMIHGAC--------VS 112 P++R Y A P N Y G+ IHG VS Sbjct: 53 GPTWSPTPNTRRAYAAEGKTLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNSNFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC + + I +F V Sbjct: 113 QGCIRLRNNDIKYLFDNVPVGTRVQ 137 >gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clostridium tetani E88] Length = 510 Score = 42.0 bits (98), Expect = 0.009 Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 25/144 (17%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 S +K+ +P + I + +K+ +++ +LIKS+ G Sbjct: 379 SNYVKKVIPNNTYSILVSLANQKVYIYENN-----RLIKSFICSTGMRGT---------P 424 Query: 63 SPEGFYSVQPNQLN--PDSRY--YLAINIGFPNAYDRAHGYTGKYLMIH------GACVS 112 + +G + + + + Y Y I + + + I G S Sbjct: 425 TIKGRFLIGGRGASFGQEHGYICYNFIRFNYDYLFHSVLHNLDGSI-IQSEYNKLGTQAS 483 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVG 136 GC + D I ++ + + Sbjct: 484 HGCVRLKDEDIKWMYNNIPRNTLV 507 >ErfK_YbiS_YhnG_Q6N1G4_67-202_PF03734.4 Length = 136 Score = 42.0 bits (98), Expect = 0.009 Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG +S GC MT+ + +++ V+ + Sbjct: 96 IHGTNQPEYIGASISSGCIRMTNEDVIDLYNRVKMGTIV 134 >gi|48849271|ref|ZP_00303515.1| COG1376: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 216 Score = 42.0 bits (98), Expect = 0.010 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 28/129 (21%) Query: 14 PVYIRIFKEERKLELWKAKMG-GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P+ + + R + +++A G ++K Y GD +P G + + Sbjct: 89 PLVVTVDLTARVISVFRAGHEIGAAAILKGY---------------GDKPTPTGIFPITE 133 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-----SVGCYAMTDAQIDEIF 127 + S Y A P Y T + IHG+ V + GC + DA ++F Sbjct: 134 KDADHVSNIYDA-----PMPYMMRL--TNDGVSIHGSKVEKGYATNGCIGVPDAFAAKLF 186 Query: 128 AFVRDAFVG 136 + Sbjct: 187 KLAKLGDKV 195 >gi|69929997|ref|ZP_00626874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 199 Score = 41.7 bits (97), Expect = 0.010 Identities = 26/142 (18%), Positives = 41/142 (28%), Gaps = 29/142 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG--------LGPKRREGDFQS 63 P I I ER L L + Y I G + K D+ + Sbjct: 62 EPPGTIIIQTAERHLYLIQGNGRAI-----RYGIGVGREGFQWQGILNITRKAEWPDW-T 115 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVG 114 P P + + G N Y G + IHG +S G Sbjct: 116 P------PPEMIKRQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNRPDTIGTAISSG 169 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C+ + +A + +++ V Sbjct: 170 CFRLVNADVADLYDRVPVGTRV 191 >ErfK_YbiS_YhnG_Q92KJ2_100-241_PF03734.4 Length = 142 Score = 41.7 bits (97), Expect = 0.010 Identities = 29/144 (20%), Positives = 47/144 (32%), Gaps = 31/144 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 +P I + +R L L + Y + G G + + P+ Sbjct: 1 EAPGTIVVDTADRYLYLVQPGGRAM-----RYGVGLGREGFAWSGRGLIQWKQKWPK--- 52 Query: 69 SVQPNQLN---PDSRYYLAINIGFPNAYDRAHGYTGKYLM---------IHGAC------ 110 PN++ P Y A N G P D G Y+ +HG Sbjct: 53 WTPPNEMIARQPVLAKYSADNGGMPPGLDNPLGSRALYIFQNGQDTLYRVHGTPEWQSIG 112 Query: 111 --VSVGCYAMTDAQIDEIFAFVRD 132 VS GC M + + +++ VR+ Sbjct: 113 KAVSSGCVRMVNQDVIDLYDRVRN 136 >gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 267 Score = 41.7 bits (97), Expect = 0.010 Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 25/136 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFYSVQP 72 I I + L L + G+ + ++ Y + G G K + P P Sbjct: 139 TIVIDTPNKFLYLVQ----GDGKALR-YGVGVGRPGFTWSGVKTITAKREWPA---WTPP 190 Query: 73 NQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG--------ACVSVGCYAMTD 120 + PD ++ N Y G L IHG VS GC M + Sbjct: 191 KEMLARRPDLPRHMEGGPA--NPLGARAMYLGSSLYRIHGSNEPWTIGTNVSSGCIRMRN 248 Query: 121 AQIDEIFAFVRDAFVG 136 + +++ V Sbjct: 249 EDVIDLYGRVGVGTKV 264 >gi|69927652|ref|ZP_00624813.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 249 Score = 41.7 bits (97), Expect = 0.010 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG +S GC MT+ + +++ V+ V Sbjct: 185 IHGTNQPEYIGASISSGCIRMTNEDVIDLYDRVKMGTVV 223 >gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobium japonicum USDA 110] Length = 262 Score = 41.7 bits (97), Expect = 0.011 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 11/71 (15%) Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDE 125 P ++A G N Y G + IHG VS GC +T+ + + Sbjct: 177 RQPYLPRHMAGGPG--NPLGARAMYLGGTIYRIHGTNAPDTIGKHVSSGCIRLTNDDVTD 234 Query: 126 IFAFVRDAFVG 136 +++ V Sbjct: 235 LYSRVNVGTKV 245 >gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 227 Score = 41.7 bits (97), Expect = 0.011 Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG +S GC MT+ + +++ V+ + Sbjct: 162 IHGTNQPEYIGASISSGCIRMTNEDVIDLYNRVKMGTIV 200 >ErfK_YbiS_YhnG_Q89FR3_116-247_PF03734.4 Length = 132 Score = 41.7 bits (97), Expect = 0.011 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 11/71 (15%) Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDE 125 P ++A G N Y G + IHG VS GC +T+ + + Sbjct: 62 RQPYLPRHMAGGPG--NPLGARAMYLGGTIYRIHGTNAPDTIGKHVSSGCIRLTNDDVTD 119 Query: 126 IFAFVRDAFVG 136 +++ V Sbjct: 120 LYSRVNVGTKV 130 >gi|49239475|emb|CAF25827.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 258 Score = 41.7 bits (97), Expect = 0.012 Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 39/150 (26%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP + I +E L L G + ++ Y I GL EG EG + Sbjct: 89 SPGTLVIDTQECFLYLI----GENGKALR-YGIGVGKEGLA---FEG-----EGTVQRKR 135 Query: 73 NQLNP---------DSRYYLAINIGFP-------NAYDRAHGYTGKYLM--IHGAC--VS 112 + + Y + G P A GK + IHG+ S Sbjct: 136 RWPSWAPTAAMMAREPERYGHLGKGMPPGPDNPLGARALYLFRNGKDTLFRIHGSNESWS 195 Query: 113 ------VGCYAMTDAQIDEIFAFVRDAFVG 136 GC + + I +++ V + Sbjct: 196 IGRAISSGCIRLLNQDIIDLYDRVPNGARV 225 >gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 197 Score = 41.3 bits (96), Expect = 0.013 Identities = 25/147 (17%), Positives = 41/147 (27%), Gaps = 39/147 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +P I + ER L L + Y I G + +G + Sbjct: 60 EAPGTIIVQTSERYLYLVQGNNRAL-----RYGIGVGREGF----------TWQGLLKIS 104 Query: 72 PN-------------QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC------- 110 Q P + G N Y G + IHG Sbjct: 105 RKAEWPDWVPPPEMIQRQPYLP--RFMAGGPGNPLGARAMYLGSTVYRIHGTNRPDTIGT 162 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC+ + +A + +++A V Sbjct: 163 AISSGCFRLVNADVMDLYARVPVGTKV 189 >gi|27383268|ref|NP_774797.1| hypothetical protein bll8157 [Bradyrhizobium japonicum USDA 110] Length = 147 Score = 41.3 bits (96), Expect = 0.014 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 34/142 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + I K +++ + ++ G + S+P+ G G +P + Q Sbjct: 29 ADLRVDIDKSSQRMSV---RVDGAPRY--SWPVSTGCSGYG---------TPSDTFHPQA 74 Query: 73 NQLNPDSR-YYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQI 123 SR YY + P+A +G+ IHG S GC + A Sbjct: 75 MMRRYFSRRYYNSPM---PHAIFFHYGFA-----IHGTTDIYRLGGPASHGCVRLHPAHA 126 Query: 124 DEIFAFVRDAFVGGQPSVQVSI 145 +FA V+ G + + I Sbjct: 127 AALFALVQ---REGARNTTIRI 145 >gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesorhizobium loti MAFF303099] Length = 263 Score = 41.3 bits (96), Expect = 0.015 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 36/162 (22%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 P I + E L L + + I+ Y + G G + + P + Sbjct: 92 EKPGTIVVDVSEHFLYLVRDG----GKAIR-YGVSLGKAGFGWTGSAVVQARKKWP--VW 144 Query: 69 SVQP---NQLNPDSRYYLAINIGFPNAYDRAHG----YTGKYLM--IHGAC--------V 111 + P + +++ + G P + A GK M +HG Sbjct: 145 TPPPEMIQRRPELAKFKDGMPPG-PQSPLGARALYLFRDGKDTMYRLHGTPEWDSIGKNA 203 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 S GC + I ++++ V QV + P ++ A Sbjct: 204 SSGCVRFMNQDIIDLYSRV-------NGPAQVFVRP-NLSAA 237 >ErfK_YbiS_YhnG_Q92KL9_66-205_PF03734.4 Length = 140 Score = 41.3 bits (96), Expect = 0.016 Identities = 20/143 (13%), Positives = 35/143 (24%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------PKRREGDFQSP 64 +P I + + L Y I G G ++ E +P Sbjct: 1 EAPGTIIVDTNSKYLYYIDGSNRA-----TRYGIGVGRDGFGWSGVVKVGRKAEWPSWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK--YLM-IHGA--CVS------V 113 V+ I P + Y G + IHG + Sbjct: 56 PAEMRVRERAKGRILPITQPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTIGQNMSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC M + ++ ++ Sbjct: 116 GCIRMMNEDVEHLYERAGIGTKV 138 >gi|15073710|emb|CAC45352.1| PUTATIVE SIGNAL PEPTIDE PROTEIN [Sinorhizobium meliloti] Length = 231 Score = 41.3 bits (96), Expect = 0.016 Identities = 20/150 (13%), Positives = 39/150 (26%), Gaps = 23/150 (15%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------PKRR 57 +++ + +P I + + L Y I G G ++ Sbjct: 59 KVRFRTDEAPGTIIVDTNSKYLYYIDGSNRA-----TRYGIGVGRDGFGWSGVVKVGRKA 113 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK--YLM-IHGA--CVS 112 E +P V+ I P + Y G + IHG + Sbjct: 114 EWPSWTPPAEMRVRERAKGRILPITQPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWT 173 Query: 113 ------VGCYAMTDAQIDEIFAFVRDAFVG 136 GC M + ++ ++ Sbjct: 174 IGQNMSSGCIRMMNEDVEHLYERAGIGTKV 203 >gi|46192110|ref|ZP_00007275.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 284 Score = 41.3 bits (96), Expect = 0.016 Identities = 33/156 (21%), Positives = 44/156 (28%), Gaps = 29/156 (18%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------P 54 V +E+ P I + R L L Q Y I G G P Sbjct: 92 VRREVDYFTDQPPGTIVVDPYARYLYLV-----QPGQRALRYAIAVGREGRGFSGEAVIP 146 Query: 55 KRREGDFQSPEGFYSV-QPNQLNPDSRY---YLAINIGFPNAYDRAHGYTGKYLM--IHG 108 +RE P P Q P L+ +G A GK IHG Sbjct: 147 IKREWPRWIPTKSMIAEDPEQYGPWKDGMDGGLSNPLG---ARALYLHRDGKDTYYRIHG 203 Query: 109 ACV--------SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC + + I +++A V Sbjct: 204 TNDVSSIGKATSAGCIRLWNQDILDLYARVSLGTQV 239 >gi|68190182|gb|EAN04842.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 199 Score = 41.3 bits (96), Expect = 0.017 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 34/156 (21%) Query: 3 SKELKQQLP----GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 + KQ++P +P I + E L+ + GG + + Y + GL K + Sbjct: 47 PRYRKQRVPYDGGEAPGTIVVNTSE--FYLYHVEEGG-WAM--RYGVGVGEQGLTLKGKA 101 Query: 59 GDFQ-------SPEGFYSVQPNQLNPDSRYY---LAINIGFP-NAYDRAHGYTGKYLM-- 105 + +P + + P Y + + P A G+ M Sbjct: 102 KIGRKAEWPSWTP----TANMLRRKPHLVQYAGGVEGGLNNPLGARALYLYRGGRDTMFR 157 Query: 106 IHGA--CVS------VGCYAMTDAQIDEIFAFVRDA 133 IHG S GC +T+ I +++ Sbjct: 158 IHGTNEPWSIGNAMSSGCIRLTNDDIVDLYERTPVG 193 >ErfK_YbiS_YhnG_Q6D900_96-233_PF03734.4 Length = 138 Score = 40.9 bits (95), Expect = 0.017 Identities = 24/145 (16%), Positives = 37/145 (25%), Gaps = 37/145 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I I E +L + K ++ PI G +P + + + Sbjct: 6 IVINSAEMRLY-YYPKGSKTVVVL---PIGIGELGKD---------TPINWTTSVQRKKA 52 Query: 76 ----NPDSRYYLA-----------INIGFPNAYDRAHGYTGKYLMIHGAC--------VS 112 P ++ + G N Y G IHG VS Sbjct: 53 GPTWTPTAKMHAEYAARGETLQKVFPAGPDNPMGLYALYIGNLYAIHGTNANFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC + I +F V Sbjct: 113 HGCVRLRADDIKYLFNSVPVGTRVQ 137 >gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesorhizobium loti MAFF303099] Length = 196 Score = 40.9 bits (95), Expect = 0.017 Identities = 27/149 (18%), Positives = 42/149 (28%), Gaps = 39/149 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P I I K E+ L L + Q ++ Y I G G G V Sbjct: 60 EQPGTIIIRKSEKALYLVTR----QGQALR-YQISVGRDGFGW----------TGVVKVG 104 Query: 72 PNQLNPDSRYYLAINIGFP--------NAYDRAHGYT------GKYLM--IHGACV---- 111 P R + P Y+ G+ + IHG Sbjct: 105 AKTEWPQWRPPREMRARQPELPELVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGV 164 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVG 136 + GC+ +T+ + ++F V Sbjct: 165 GFDGTSGCFRLTNTDVIDLFKRVPVGTKV 193 >gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9] Length = 301 Score = 40.9 bits (95), Expect = 0.018 Identities = 26/156 (16%), Positives = 43/156 (27%), Gaps = 22/156 (14%) Query: 7 KQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG--------PKRR 57 K LP I I E +L + + ++ +PI G ++ Sbjct: 83 KVILPNVKRKGIIINLAELRLYYF---PEDDKSIVYIFPIGIGRVGRATPNMITKVSQKI 139 Query: 58 EGDFQSPEGFYSVQPNQLN--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC----- 110 E +P + + A Y Y+ +IHG Sbjct: 140 ENPTWTPTANIRKEYREKKDIELPAVVPAGPENPLGEYAMRLAYSRGEYLIHGTNKDFGI 199 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 VS GC M I+ +F V + + Sbjct: 200 GMRVSSGCIRMNPWDIEWLFPQVPRGTSVQIINQPL 235 >gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 340 Score = 40.9 bits (95), Expect = 0.019 Identities = 24/148 (16%), Positives = 36/148 (24%), Gaps = 40/148 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E +L + + YPI G +P SV + N Sbjct: 99 IVVNLAELRLYYYPKGKN----TVIVYPIGIGQLG---------RNTPLMTTSVSEKREN 145 Query: 77 PD-------SRYYLA-----------INIGFPNAYDRAHGYTGKYLMI-HGAC------- 110 P ++YL P + + HG Sbjct: 146 PTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNADFGIGM 205 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 VS GC + I +F V Sbjct: 206 RVSSGCIRLRPDDIKALFDNVPVGTRVQ 233 >gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 196 Score = 40.9 bits (95), Expect = 0.019 Identities = 24/135 (17%), Positives = 40/135 (29%), Gaps = 15/135 (11%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P I I ER L L + Y I G + + E Sbjct: 59 EPPGTIIIQTAERHLYLIQGNGRAI-----RYGIGVGRAGFQWQGILNITRKAEWPDWTP 113 Query: 72 PNQLNPDSRYY-LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDA 121 P ++ Y + G N Y G + IHG +S GC+ + +A Sbjct: 114 PPEMIARQPYLPRFMAGGPGNPMGARAMYLGTTVYRIHGTNQPDTIGTAISSGCFRLVNA 173 Query: 122 QIDEIFAFVRDAFVG 136 + +++ + Sbjct: 174 DVIDLYDRIPVGTRV 188 >gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 239 Score = 40.9 bits (95), Expect = 0.021 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 11/71 (15%) Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDE 125 P ++A G N Y G + IHG VS GC +T+ + + Sbjct: 153 RQPYLPRHMAGGPG--NPLGARAMYLGGTVYRIHGTNAPSTIGTHVSSGCIRLTNEDVKD 210 Query: 126 IFAFVRDAFVG 136 +++ V Sbjct: 211 LYSRVAVGAKV 221 >ErfK_YbiS_YhnG_Q97FU5_105-228_PF03734.4 Length = 124 Score = 40.5 bits (94), Expect = 0.025 Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 23/135 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P+ I + E++++ ++ AK +L+ S+ G +P+G Y+++ Sbjct: 1 EKPLRIDVDLEKQRVNIYDAKS----RLVNSFVCSSGMNGYD---------TPKGEYTIK 47 Query: 72 PN-------QLNPDSRYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 + N + Y++ + +D+ + G S GC + Sbjct: 48 ERGYSFYSQKYNEGAYYWVQFMGNYLFHSVPFDKNKNIEPNEVNKLGNKASHGCIRLPID 107 Query: 122 QIDEIFAFVRDAFVG 136 I+ + + Sbjct: 108 NAKWIYDNIPRGTLV 122 >ErfK_YbiS_YhnG_Q6N3X7_92-223_PF03734.4 Length = 132 Score = 40.5 bits (94), Expect = 0.027 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 11/71 (15%) Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDE 125 P ++A G N Y G + IHG VS GC +T+ + + Sbjct: 62 RQPYLPRHMAGGPG--NPLGARAMYLGGTVYRIHGTNAPSTIGTHVSSGCIRLTNEDVKD 119 Query: 126 IFAFVRDAFVG 136 +++ V Sbjct: 120 LYSRVAVGAKV 130 >gi|68234309|ref|ZP_00573396.1| Putative peptidoglycan binding domain 1:ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 314 Score = 40.5 bits (94), Expect = 0.027 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 12/71 (16%) Query: 63 SPEGFYSVQPNQLN-----PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYA 117 +P G + V Q++ P Y P + Y+ + G S GC Sbjct: 238 TPRGTWHV-YRQVDGVDPGPLGGLYR------PKYFHTDGIAVHGYVSVPGRAASHGCVR 290 Query: 118 MTDAQIDEIFA 128 +T+ +D ++A Sbjct: 291 VTNEAMDWLWA 301 >ErfK_YbiS_YhnG_Q6D623_94-234_PF03734.4 Length = 141 Score = 40.5 bits (94), Expect = 0.028 Identities = 24/148 (16%), Positives = 36/148 (24%), Gaps = 40/148 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E +L + + YPI G +P SV + N Sbjct: 6 IVVNLAELRLYYYPKGKN----TVIVYPIGIGQLG---------RNTPLMTTSVSEKREN 52 Query: 77 PD-------SRYYLA-----------INIGFPNAYDRAHGYTGKYLMI-HGAC------- 110 P ++YL P + + HG Sbjct: 53 PTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNADFGIGM 112 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 VS GC + I +F V Sbjct: 113 RVSSGCIRLRPDDIKALFDNVPVGTRVQ 140 >gi|69937362|ref|ZP_00632028.1| Twin-arginine translocation pathway signal [Paracoccus denitrificans PD1222] Length = 217 Score = 40.1 bits (93), Expect = 0.029 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 21/135 (15%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLI-----------KSYPICKWSGGLGPK---RREGDF 61 I + R L W + Y+L ++ +GP E Sbjct: 87 AILVDLTSRALHFWS-EDQSVYRLFPTSVPVSADLTRTGRTEIIKKVVGPSWAPTPEMKK 145 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 ++PE V P NP + L ++ + R HG T I G S GC + + Sbjct: 146 RNPEWPDFVPPGPDNPLGTHALWLSWQY----YRIHG-THDTRKI-GRKSSNGCIGLYNE 199 Query: 122 QIDEIFAFVRDAFVG 136 I +++ + Sbjct: 200 HIQQLYELTKIGTQV 214 >gi|46192901|ref|ZP_00005863.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 254 Score = 40.1 bits (93), Expect = 0.030 Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 27/144 (18%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGF 67 P P I + R+L + E + ++ Y I GL G + + + P Sbjct: 69 PEKPGTIVVDTFARRLY----YVTEEGRAMR-YAIAVGRAGLAFRGNAKVQRKREWP--S 121 Query: 68 YSVQPNQLNPDSRYYLAINIGFPN-------AYDRAHGYTGKYLM--IHGA--------C 110 + N + Y G P A G+ M IHG Sbjct: 122 WQPTANMIRTQPEMYAPYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQNASIGHA 181 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAF 134 S GC + + +++ V Sbjct: 182 TSAGCIRLFNQDAIDLYGRVNLGT 205 >gi|68002719|ref|ZP_00535287.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 303 Score = 40.1 bits (93), Expect = 0.031 Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 36/137 (26%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ E ++ +I I E+ + ++ +L S P G Sbjct: 123 PLEYEPAKRYQK---FILISLTEQWIGAYENG-----KLKFSMPAATGKTG--------- 165 Query: 61 FQSPEGFYSVQPNQLNPDSRYY----LA----------INIGFPNAYDRAHGYTGKYLMI 106 ++P G + + S Y L+ +IG N H + Sbjct: 166 HETPTGLFRIDARHRTHTSSLYQTDDLSAQYPMDFAMRFHIGADNVSYWIHARD-----L 220 Query: 107 HGACVSVGCYAMTDAQI 123 G S GC + D + Sbjct: 221 PGKPASHGCVGLFDESM 237 >gi|53688090|ref|ZP_00109223.2| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 171 Score = 40.1 bits (93), Expect = 0.033 Identities = 22/129 (17%), Positives = 35/129 (27%), Gaps = 31/129 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE--GFYSVQPN 73 +I+I +++L W+ Y SG +P G + VQ Sbjct: 58 WIQIDLSKQRLIAWEGDRVV-------YGSAISSGKKA---------TPTLVGTFKVQSK 101 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDE 125 + N PN + IHG VS GC + Sbjct: 102 FKTTRMQGE---NYNVPNV--PYAMFYEGNYAIHGAYWHKRFGTPVSHGCVNIAPKHAKW 156 Query: 126 IFAFVRDAF 134 +F + Sbjct: 157 LFQWASVGT 165 >gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Bartonella henselae str. Houston-1] Length = 249 Score = 40.1 bits (93), Expect = 0.035 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 39/150 (26%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P + I +E L L G + ++ Y I GL EG EG + Sbjct: 78 PPGTLVIDTQECFLYLI----GENGRALR-YGIGVGKEGLA---FEG-----EGVVQRKR 124 Query: 73 NQLNP---------DSRYYLAINIGFP-------NAYDRAHGYTGKYLM--IHGA----- 109 N + Y + G P A G+ + IHG+ Sbjct: 125 RWPNWAPTAAMMAREPERYGHLGRGMPPGPDNPLGARALYLFKNGQDTLFRIHGSHESWS 184 Query: 110 ---CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC + + I +++ V Sbjct: 185 IGHAISSGCIRLLNQDIIDLYDRVPIGSRV 214 >gi|46190626|ref|ZP_00206527.1| COG1376: Uncharacterized protein conserved in bacteria [Bifidobacterium longum DJO10A] Length = 235 Score = 40.1 bits (93), Expect = 0.036 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 35/152 (23%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K+ S + + + ++++ + K+ Y +I S + D Sbjct: 102 PTGKQPDLS-QYSDLSVEVSLAKQRVYV-KSGGQTIYTMIASTGV--------------D 145 Query: 61 FQSPEGFYSVQPNQ-----------LNPDSRYYLA--INIGFPN--AYDRAHGYTGKYLM 105 +P G Y++ + ++Y + + P A+ G L Sbjct: 146 DATPHGSYTIDTRGEHFYNAEEGMGADYWVQFYGSYLFH-SVPTGEAFGDYLPEEGAKL- 203 Query: 106 IHGACVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 G S GC + A + V D + Sbjct: 204 --GQPASHGCVRLAVADAQWFYDQVPDGTLVT 233 >gi|76164940|gb|EAO59080.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aurantiacus J-10-fl] Length = 372 Score = 40.1 bits (93), Expect = 0.037 Identities = 24/160 (15%), Positives = 44/160 (27%), Gaps = 48/160 (30%) Query: 9 QLPGSPVY--------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 +LPG+ + I + + L ++ + L+ S P+ G Sbjct: 239 RLPGAVDWSPGLWSRRIEVDLARQYLFAYEDNL-----LVFSAPVATGRDG--------- 284 Query: 61 FQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYTGKYLMIHGACV----- 111 F +P G +++ L P Y + +HG Sbjct: 285 FNTPRGDFTIYYRLPQQTMSGCLGGECWYVPNVPWVQ-----YVVGGVALHGTYWHNAHG 339 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 S GC + ++ + V V IY Sbjct: 340 SGVRMSHGCINLRIDDAQWLYEWADLG-------VPVKIY 372 >ErfK_YbiS_YhnG_Q88KH0_95-232_PF03734.4 Length = 138 Score = 39.7 bits (92), Expect = 0.037 Identities = 19/135 (14%), Positives = 41/135 (30%), Gaps = 23/135 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR--REGDFQSPEGFYSVQPNQ 74 I I E ++ + ++ ++P+ G G ++P ++ + Sbjct: 6 IVINLAEYRMYYFPKGES----VVYTFPLGIGREGWGSPIANTRITAKTPNPTWTPPASI 61 Query: 75 LNPDSRYYLAINIGFP-------NAYDRAHGYTGKYLMIHGACV--------SVGCYAMT 119 + + P + G G +IHG+ S GC+ M Sbjct: 62 RKEHAEDGDILPTVVPAGPDNPLGPFKFTLGVPGY--LIHGSNKKFGIGMRTSHGCFRMF 119 Query: 120 DAQIDEIFAFVRDAF 134 + + E+ V Sbjct: 120 NNNVLELSKMVPVGT 134 >gi|38234386|ref|NP_940153.1| Putative lipoprotein [Corynebacterium diphtheriae NCTC 13129] Length = 389 Score = 39.7 bits (92), Expect = 0.038 Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 32/140 (22%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + + ++K Q + S P+ + +P G Y++ NP Sbjct: 238 VADDATKTMVIYKNG-----QQVNSMPVSMGANKW---------PTPNGIYTIGDK--NP 281 Query: 78 ----DSRYYLAIN--IGFPNAYDRAHGYTGKYLMIHGACV----------SVGCYAMTDA 121 DS Y + G+ A + + +H A S GC ++ Sbjct: 282 SLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGCINVSTD 341 Query: 122 QIDEIFAFVRDAFVGGQPSV 141 +V+ + + Sbjct: 342 NAAWFQNYVKRGDIVRVQNT 361 >gi|69930266|ref|ZP_00627006.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 213 Score = 39.7 bits (92), Expect = 0.041 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 56/155 (36%) Query: 41 KSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ----LNPDSRYYLAINIGFP------ 90 +++P+ GG+ +REGD +P G + +P R +L + P Sbjct: 64 RAFPVALGRGGIRANKREGDGGTPRGIFRPIRLWWRPDRHPRPRTFLPVRPITPTDAWCE 123 Query: 91 NAYDRAHGYT------------------------------------GKYLMIH-GACV-- 111 + DR + G + +H Sbjct: 124 DPADRHYNRPIRLTRDASGDRLTRDDHLYDFIIEIDHNTRPRIAGRGSAVFLHLARDNFG 183 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + GC AMT + + + P ++ I Sbjct: 184 PTAGCVAMTRSAMLRLL------LRRIGPRTKIVI 212 >gi|69299488|ref|ZP_00621475.1| Twin-arginine translocation pathway signal [Silicibacter sp. TM1040] Length = 205 Score = 39.7 bits (92), Expect = 0.042 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 19/134 (14%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSY-----PICKWSGGLGPKRREGDFQSPEGFYSV 70 I + + R L W + Y+L S + + ++ EG +P Sbjct: 75 AILVDIDSRALHFWS-EDQSVYKLFPSSVPLSDDLTRRGRTRVVRKVEGPSWAPTP---- 129 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQ 122 + NP+ Y+ P + + +Y IHG S GC + + Sbjct: 130 NMRKRNPEWPAYIPPGPDNPLGSHALY-LSWQYYRIHGTHDTRKIGRKSSNGCIGLYNEH 188 Query: 123 IDEIFAFVRDAFVG 136 I E++ R Sbjct: 189 IAELYKLTRSGTQV 202 >gi|67934945|ref|ZP_00527970.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides DSM 266] Length = 284 Score = 39.7 bits (92), Expect = 0.042 Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 23/139 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP---ICKWSGGLGPKRR 57 PV +E ++ P + + ER++ ++ + Q +Y + W KR Sbjct: 149 PVEREKAEKYVPIPTTLTDSRGEREIRIYLSS-----QYFGAYEKGVLVFWGAVSTGKRT 203 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVS 112 +P G + V Q + + I + NA +H G S Sbjct: 204 ---NATPPGKFVVNYKQR-----FKKS--IKYDNAPMPYSINYNGGYFMHQQSLPGYPAS 253 Query: 113 VGCYAMTDAQIDEIFAFVR 131 GC + + + +F + + Sbjct: 254 HGCVRLLMSDAERLFTWAK 272 >ErfK_YbiS_YhnG_Q6G2L0_77-216_PF03734.4 Length = 140 Score = 39.7 bits (92), Expect = 0.046 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 39/150 (26%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P + I +E L L G + ++ Y I GL EG EG + Sbjct: 2 PPGTLVIDTQECFLYLI----GENGRALR-YGIGVGKEGLA---FEG-----EGVVQRKR 48 Query: 73 NQLNP---------DSRYYLAINIGFP-------NAYDRAHGYTGKYLM--IHGA----- 109 N + Y + G P A G+ + IHG+ Sbjct: 49 RWPNWAPTAAMMAREPERYGHLGRGMPPGPDNPLGARALYLFKNGQDTLFRIHGSHESWS 108 Query: 110 ---CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC + + I +++ V Sbjct: 109 IGHAISSGCIRLLNQDIIDLYDRVPIGSRV 138 >ErfK_YbiS_YhnG_Q899Q5_388-509_PF03734.4 Length = 122 Score = 39.7 bits (92), Expect = 0.048 Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 25/135 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I + +K+ +++ +LIKS+ G + +G + + Sbjct: 1 NNTYSILVSLANQKVYIYENN-----RLIKSFICSTGMRGT---------PTIKGRFLIG 46 Query: 72 PNQLN--PDSRY--YLAINIGFPNAYDRAHGYTGKYLMIH------GACVSVGCYAMTDA 121 + + Y Y I + + + I G S GC + D Sbjct: 47 GRGASFGQEHGYICYNFIRFNYDYLFHSVLHNLDGSI-IQSEYNKLGTQASHGCVRLKDE 105 Query: 122 QIDEIFAFVRDAFVG 136 I ++ + + Sbjct: 106 DIKWMYNNIPRNTLV 120 >gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 360 Score = 39.3 bits (91), Expect = 0.049 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 8/54 (14%) Query: 92 AYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 A+ +IHG VS GC + I+ +F V Sbjct: 178 AFALRLAAGRGEYLIHGTNADFGIGMRVSSGCIRLRPDDIETLFNAVPRGTRVQ 231 >ErfK_YbiS_YhnG_Q8X604_93-232_PF03734.4 Length = 140 Score = 39.3 bits (91), Expect = 0.050 Identities = 28/144 (19%), Positives = 40/144 (27%), Gaps = 39/144 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E +L + + + YPI GL ++P V N Sbjct: 6 IIVNLAELRLYYYPPGEN----IXQVYPIGIGLQGL---------ETPVMETRVGQKIPN 52 Query: 77 PD-------SRYYLAINIGFP-----------NAYDRAHGYTGKYLMIHGA--------C 110 P + L I P Y + +IHG Sbjct: 53 PTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC M I +F+ VR Sbjct: 113 VSSGCIRMNAPDIKALFSSVRTGT 136 >gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 221 Score = 39.3 bits (91), Expect = 0.050 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG +S GC MT+ +++ V+ + Sbjct: 162 IHGTNQPEYIGTSISSGCIRMTNEDAIDLYDRVKVGTMV 200 >ErfK_YbiS_YhnG_Q89BJ1_28-145_PF03734.4 Length = 118 Score = 39.3 bits (91), Expect = 0.053 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 34/142 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + I K +++ + ++ G + S+P+ G G +P + Q Sbjct: 2 ADLRVDIDKSSQRMSV---RVDGAPRY--SWPVSTGCSGYG---------TPSDTFHPQA 47 Query: 73 NQLNPDSR-YYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQI 123 SR YY + P+A +G+ IHG S GC + A Sbjct: 48 MMRRYFSRRYYNSPM---PHAIFFHYGFA-----IHGTTDIYRLGGPASHGCVRLHPAHA 99 Query: 124 DEIFAFVRDAFVGGQPSVQVSI 145 +FA V+ G + + I Sbjct: 100 AALFALVQ---REGARNTTIRI 118 >gi|68552645|ref|ZP_00592032.1| ErfK/YbiS/YcfS/YnhG [Prosthecochloris aestuarii DSM 271] Length = 174 Score = 39.3 bits (91), Expect = 0.054 Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 15/94 (15%) Query: 45 ICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYL 104 I W K+ + G + V Q Y + I + NA Sbjct: 85 IAFWGPVSSGKK---SRPTRPGKFVVNYKQR-----YKRS--IKYHNAPMPYAINYNGGY 134 Query: 105 MIH-----GACVSVGCYAMTDAQIDEIFAFVRDA 133 IH G S GC + + ++F +++ Sbjct: 135 FIHEQSLPGYPASHGCIRLLMSDAKKLFYWIKIG 168 >ErfK_YbiS_YhnG_Q989D5_60-195_PF03734.4 Length = 136 Score = 39.3 bits (91), Expect = 0.061 Identities = 27/149 (18%), Positives = 42/149 (28%), Gaps = 39/149 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P I I K E+ L L + Q ++ Y I G G G V Sbjct: 1 EQPGTIIIRKSEKALYLVTR----QGQALR-YQISVGRDGFGW----------TGVVKVG 45 Query: 72 PNQLNPDSRYYLAINIGFP--------NAYDRAHGYT------GKYLM--IHGACV---- 111 P R + P Y+ G+ + IHG Sbjct: 46 AKTEWPQWRPPREMRARQPELPELVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGV 105 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVG 136 + GC+ +T+ + ++F V Sbjct: 106 GFDGTSGCFRLTNTDVIDLFKRVPVGTKV 134 >gi|41326655|emb|CAF21137.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family [Corynebacterium glutamicum ATCC 13032] Length = 403 Score = 39.3 bits (91), Expect = 0.062 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 36/143 (25%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--QL 75 + + ++K +L+++ P+ ++ +P G Y + + Sbjct: 246 VADDATKTMSVYKNG-----ELLRTMPVSFGRD-------TSEWATPNGTYIIGDRNESM 293 Query: 76 NPDSRYYLAINIGF-------PNAYDRAHGYTGKYLMIHGACV----------SVGCYAM 118 DS +G+ P Y Y+G + +H A S GC + Sbjct: 294 IMDS---TTFGLGYEEGGYRTPVKYATQMSYSG--IYVHAAPWSVGAQGSYNTSHGCINV 348 Query: 119 TDAQIDEIFAFVRDAFVGGQPSV 141 + V+ + + Sbjct: 349 STENAQWFQEAVKRGDIVTVKNT 371 >gi|22958594|ref|ZP_00006262.1| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 342 Score = 39.3 bits (91), Expect = 0.062 Identities = 25/145 (17%), Positives = 36/145 (24%), Gaps = 28/145 (19%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWS-----GGLGPKRREGDFQS--- 63 +P I I ER L K Y I G + + Sbjct: 79 EAPGTIVINPRERVLYFVTGKDTAI-----RYGIAVGKEGFQWSGTAVVANRRHWPTWTP 133 Query: 64 -PEGFYSVQPN-QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM--IHGAC--------V 111 PE + +L + A G+ IHG Sbjct: 134 PPE---MIDRKPELKKWEKGQPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNSIGHNA 190 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V D Sbjct: 191 SSGCIRMINQDVVDLFERVPDGAKV 215 >gi|20806941|ref|NP_622112.1| hypothetical protein TTE0432 [Thermoanaerobacter tengcongensis MB4] Length = 155 Score = 39.0 bits (90), Expect = 0.065 Identities = 30/141 (21%), Positives = 44/141 (31%), Gaps = 31/141 (21%) Query: 22 EERKLELWKAKMGGEYQLIKSYPI-CKWSGGLGP------KRREGDFQSPEGFYSVQPNQ 74 +E L LW + I+ Y C G P K G+ +P G + + Sbjct: 14 KEGVLRLWTYS-TISGKYIERYRCPCLGRGTTYPDSPDSWKYINGN--TPTGTWDATIDG 70 Query: 75 L--------NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAM 118 + NP +A+ NAY H Y MIHG + GC + Sbjct: 71 IGDPEVYGPNPR----IALTSISGNAYIAEHTYGRSGFMIHGGRADYEPPLYPTNGCIRV 126 Query: 119 TDAQIDEIFAFV-RDAFVGGQ 138 D + + D G Sbjct: 127 YDNDQAALVNIINADGESHGT 147 >ErfK_YbiS_YhnG_Q7N3U7_93-232_PF03734.4 Length = 140 Score = 39.0 bits (90), Expect = 0.066 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 8/54 (14%) Query: 92 AYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 A+ +IHG VS GC + I+ +F V Sbjct: 86 AFALRLAAGRGEYLIHGTNADFGIGMRVSSGCIRLRPDDIETLFNAVPRGTRVQ 139 >gi|53802376|ref|YP_112943.1| LysM domain protein [Methylococcus capsulatus str. Bath] Length = 434 Score = 39.0 bits (90), Expect = 0.067 Identities = 30/163 (18%), Positives = 45/163 (27%), Gaps = 54/163 (33%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ LP +P + I +L + AK +I +YP+ G + Sbjct: 94 PLQFTLPDAPRKGMVINLATMRLYHFPAKAAEG--VISTYPVGIGKEG---------RST 142 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR----AHGYT-------------GKYLM- 105 P G+ +V +P R G G Y M Sbjct: 143 PTGYMTVVRK---------TEFPTWYPTENIRRDHALKGDPLPPAVSPGPDNPLGDYAMY 193 Query: 106 -------IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 IHG S GC + I +F V+ Sbjct: 194 LSRPQYLIHGTNKPYSIGFRASNGCIRLYPEDIAAVFPEVKPG 236 >ErfK_YbiS_YhnG_Q5LRC4_82-215_PF03734.4 Length = 134 Score = 39.0 bits (90), Expect = 0.073 Identities = 6/29 (20%), Positives = 13/29 (44%) Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 G S GC + + ++E++ V+ Sbjct: 104 GRQSSSGCIGLYNQHVEELYELVQVGTQV 132 >gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 192 Score = 39.0 bits (90), Expect = 0.076 Identities = 19/144 (13%), Positives = 44/144 (30%), Gaps = 42/144 (29%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + + K+ +++ + + ++ ++P+ G +P G Y Sbjct: 23 ADLLVAVDKDAQRMSVLV-----DGEIRYTWPVSTGIAG---------HDTPNGSYRPFR 68 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-------IHGA--------CVSVGCYA 117 + SR +D + + IHG S GC Sbjct: 69 MEKTHFSR-----------EWD--NAPMPHAIFFTQVGHAIHGTTQTRRLGRAASHGCVR 115 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSV 141 ++ +FA V+ + V Sbjct: 116 LSQRNAATLFALVKQQTMARTRVV 139 >gi|68192907|gb|EAN07560.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 196 Score = 39.0 bits (90), Expect = 0.076 Identities = 26/157 (16%), Positives = 44/157 (28%), Gaps = 32/157 (20%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P + + G P I + ++ER L + Y + G R Sbjct: 44 PQFRRQRVPYAGGEKPGTIIVNRDERFLYYVEGDGWA-----TRYGVGVGKEGRTLSGRA 98 Query: 59 GDFQ-------SPEGFYSVQPNQLNPDSRYYLAINIGFPN----AYDRAHGYTGKYLM-- 105 + +P + + P Y G P+ A G+ M Sbjct: 99 VVGRKAEWPSWTP----TANMMRREPRYLQYAGGVSGGPHNPLGARALYLYRNGRDTMYR 154 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAF 134 +HG VS GC + + I ++ V Sbjct: 155 LHGTNEPWSIGQAVSSGCIRLLNDDIIHLYERVPVGT 191 >gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 39.0 bits (90), Expect = 0.076 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 21/138 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 +P I I ER L L + Y I G G + P+ Sbjct: 60 ETPGTIIISTAERHLYLVQPGGRAI-----RYGIGVGRDGFQWQGLVNITNKKEWPD--- 111 Query: 69 SVQPNQLNPDSRYY-LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAM 118 P ++ Y + G N Y G + IHG VS GC+ + Sbjct: 112 WTPPPEMIQRQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNRPDTIGTKVSSGCFRL 171 Query: 119 TDAQIDEIFAFVRDAFVG 136 + + +++ V Sbjct: 172 VNNDVADLYDRVPVGTKV 189 >ErfK_YbiS_YhnG_Q89UE9_98-229_PF03734.4 Length = 132 Score = 39.0 bits (90), Expect = 0.082 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG VS GC MT+ + ++F+ V Sbjct: 92 IHGTNDPTTIGKFVSSGCIRMTNEDVTDLFSRVNIGARV 130 >gi|23464689|ref|NP_695292.1| protein similar to YcbI of B. subtilis [Bifidobacterium longum NCC2705] Length = 180 Score = 38.6 bits (89), Expect = 0.083 Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 27/145 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K+ S + +++ ++++ + Y +I S Sbjct: 47 PTGKQPDLS-QYSDLSVKVSIAKQEVYVQSGGET-IYTMIAS----TGLNDT-------- 92 Query: 61 FQSPEGFYSVQPNQ---LNP----DSRYYLAINIGFPNAYDRAHGYTGKYLMIHG----A 109 +P G Y + NP + Y++ N F +G+Y+ G Sbjct: 93 --TPRGNYVIGMRGDHFYNPAEGMGADYWVRFNGPFLFHSVPTGANSGEYMEEEGNKLGQ 150 Query: 110 CVSVGCYAMTDAQIDEIFAFVRDAF 134 S GC +T A + + + + Sbjct: 151 PASHGCVRLTVADAEWFYNQIPEGT 175 >gi|29654687|ref|NP_820379.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 493] Length = 175 Score = 38.6 bits (89), Expect = 0.086 Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 23/131 (17%) Query: 22 EERKLELWKAKMG-----GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + +L ++ K +LIK + G PK + ++P G + + Sbjct: 47 QSGRLFVFDPKRHRWYAYQNGRLIKQGRASGGAYG-CPKNKSRSCRTPSGTFRIIRKGP- 104 Query: 77 PDSRYYLAINIGFPNAYDRAHGY----TGKYLMIHGAC------VSVGCYAMTDAQIDEI 126 P+ + +P + A + IHG+ S GC +T A + Sbjct: 105 PNCKSTR-----YPKPHGGARMDYCMCYHAFYCIHGSDHVPNYHASHGCIRVTPADARWL 159 Query: 127 F-AFVRDAFVG 136 F++ Sbjct: 160 SHNFIQYGTKV 170 >gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus] Length = 189 Score = 38.6 bits (89), Expect = 0.087 Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 19/139 (13%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPIC--KWSGGLGP--KRREGDFQSPE 65 G P+ + R L W A+ G S PI G +++EG +P Sbjct: 55 SLGKPMLV-ADTFSRALHYWNAEGGDHRIFPTSVPISDDLTKRGYTEIVRKKEGPSWTPT 113 Query: 66 ----GFYS----VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYA 117 Y + P NP A+ + +P AY + + + G S GC Sbjct: 114 PSQMARYPDWKPIGPGPDNPLG--THAMYLSWP-AYIIHGTHDTRKI---GRRSSDGCIG 167 Query: 118 MTDAQIDEIFAFVRDAFVG 136 + + I E+F Sbjct: 168 LYNEMIAELFQLCPVGTRV 186 >ErfK_YbiS_YhnG_Q5YMV0_180-308_PF03734.4 Length = 129 Score = 38.6 bits (89), Expect = 0.088 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 26/113 (23%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ--PNQLNPDSRYYLAINIGFPNAY- 93 +++K+ P G ++P G Y V Q+ DS Y + I P Y Sbjct: 22 GEVVKTMPTSLGKPG---------HETPNGTYIVGERHRQMVMDSSTYG-VPIDAPEGYK 71 Query: 94 -DRAHGY--TGKYLMIHGACV----------SVGCYAMTDAQIDEIFAFVRDA 133 D + + + +H A S GC ++ F + Sbjct: 72 LDVEYATRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKG 124 >gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 216 Score = 38.6 bits (89), Expect = 0.094 Identities = 6/29 (20%), Positives = 13/29 (44%) Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 G S GC + + ++E++ V+ Sbjct: 185 GRQSSSGCIGLYNQHVEELYELVQVGTQV 213 >gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Bradyrhizobium japonicum USDA 110] Length = 272 Score = 38.6 bits (89), Expect = 0.096 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG VS GC MT+ + ++F+ V Sbjct: 189 IHGTNDPTTIGKFVSSGCIRMTNEDVTDLFSRVNIGARV 227 >gi|68189621|gb|EAN04286.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 187 Score = 38.6 bits (89), Expect = 0.096 Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 33/151 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----------------GLGPK 55 +P I I + L L + Y + Sbjct: 31 EAPGSIVIDTSQHFLYLVRGGGRAM-----RYGVGLGREGFAWAGRAQIDRKAMWPKWHP 85 Query: 56 RREGDFQSPEGF-YSVQPNQLNPDSRYYLAINIGFP-NAYDRAHGYTGKYLM--IHGAC- 110 E + PE Y + ++ + R + I P A GK + IHG+ Sbjct: 86 PAEMIERQPELEKYKTEYDKATNEWRGGMEPGIMNPLGARAMYLYQDGKDTLYRIHGSPE 145 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAF 134 VS GC M + + +++ V + Sbjct: 146 WWSIGKSVSSGCVRMINQDVIDLYDRVPEGT 176 >gi|13471882|ref|NP_103449.1| probable carnitine operon oxidoreductase [Mesorhizobium loti MAFF303099] Length = 242 Score = 38.6 bits (89), Expect = 0.100 Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 28/155 (18%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------P 54 + +K + P I I + L L Q Y I G G Sbjct: 83 RPQLVKFRTAEQPGTIIIDGNQHFLYLV-----QPGQQAIRYGIGVGRDGFGWAGIVKVG 137 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDR--AHGYTGKY---LMIHGA 109 + E +P + + P + + G N + Y G + IHG Sbjct: 138 RMAEWPTWTPPAEMVARDPKARPWANG---MPGGPDNPLGARALYLYEGDHDTIYRIHGT 194 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + I ++ + ++ Sbjct: 195 PEPWTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKV 229 >ErfK_YbiS_YhnG_Q98KE1_92-230_PF03734.4 Length = 139 Score = 38.6 bits (89), Expect = 0.11 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 28/139 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 P I + E L L + + I+ Y + G G + + P + Sbjct: 1 EKPGTIVVDVSEHFLYLVRDG----GKAIR-YGVSLGKAGFGWTGSAVVQARKKWP--VW 53 Query: 69 SVQP---NQLNPDSRYYLAINIGFPNAYDRAHG----YTGKYLM--IHGAC--------V 111 + P + +++ + G P + A GK M +HG Sbjct: 54 TPPPEMIQRRPELAKFKDGMPPG-PQSPLGARALYLFRDGKDTMYRLHGTPEWDSIGKNA 112 Query: 112 SVGCYAMTDAQIDEIFAFV 130 S GC + I ++++ V Sbjct: 113 SSGCVRFMNQDIIDLYSRV 131 >gi|15026778|gb|AAK81597.1| Uncharacterized conserved protein [Clostridium acetobutylicum ATCC 824] Length = 308 Score = 38.2 bits (88), Expect = 0.11 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 15/101 (14%) Query: 22 EERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY------------- 68 KL ++ ++L + G+ ++EGD ++PEG + Sbjct: 127 TAMKLFTYEKDNSNTWRLKLTTKGVVGVKGISLNKKEGDLKTPEGIFGFLFEFGSAPNPG 186 Query: 69 -SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG 108 ++ + +P + + I N + G HG Sbjct: 187 TKMEYKRTHPGDYWSSSRTIKEYNTWVTYKGSPET-RFGHG 226 >ErfK_YbiS_YhnG_Q6LJB5_89-230_PF03734.4 Length = 142 Score = 38.2 bits (88), Expect = 0.12 Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 21/139 (15%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG--------PKRREGDFQSPEGFY 68 I I E +L + + ++ +PI G ++ E +P Sbjct: 6 IIINLAELRLYYF---PEDDKSIVYIFPIGIGRVGRATPNMITKVSQKIENPTWTPTANI 62 Query: 69 SVQPNQLN--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAM 118 + + A Y Y+ +IHG VS GC M Sbjct: 63 RKEYREKKDIELPAVVPAGPENPLGEYAMRLAYSRGEYLIHGTNKDFGIGMRVSSGCIRM 122 Query: 119 TDAQIDEIFAFVRDAFVGG 137 I+ +F V Sbjct: 123 NPWDIEWLFPQVPRGTSVQ 141 >ErfK_YbiS_YhnG_Q8PB12_56-167_PF03734.4 Length = 112 Score = 38.2 bits (88), Expect = 0.12 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 19/105 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + E++ ++ + LI I G ++P G +++ Sbjct: 3 PMAVIVSLTEQRAYAYRNGI-----LIGVSTISSGKPG---------HETPTGVFTILQK 48 Query: 74 QLNPDSRYYLAINIGFPNA--YDRAHGYTGKYLMIHGACVSVGCY 116 + S Y A + + +D + G + G S GC Sbjct: 49 DKDHRSSIYNAAPMPYQQRLTWDGVALHAGG---LPGYPESHGCV 90 >gi|68191412|gb|EAN06068.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 139 Score = 38.2 bits (88), Expect = 0.12 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 15/116 (12%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 R+ ++ + + K Q++ +P+ G + +P G + Sbjct: 26 RVSLSKQVMTVKKGN-----QVLYRWPVSTARKG---------YVTPRGRWKPTRMHRMW 71 Query: 78 DSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 SR Y + F Y R + G Y + G S GC + ++++ V++ Sbjct: 72 RSRKYDMSPMPFSIFYHRGYAIHGTYAVKSLGRRASHGCVRLHPDNAAKLYSLVKE 127 >ErfK_YbiS_YhnG_Q89VM1_60-191_PF03734.4 Length = 132 Score = 38.2 bits (88), Expect = 0.13 Identities = 25/137 (18%), Positives = 40/137 (29%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 +P I I ER L L + Y I G G + P + Sbjct: 1 ETPGTIIISTAERHLYLVQPGGRAI-----RYGIGVGRDGFQWQGLVNITNKKEWP--DW 53 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + P + + G N Y G + IHG VS GC+ + Sbjct: 54 TPPPEMIQRQPYLPRFMAGGPGNPLGARAMYLGTTVYRIHGTNRPDTIGTKVSSGCFRLV 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + +++ V Sbjct: 114 NNDVADLYDRVPVGTKV 130 >gi|15155831|gb|AAK86651.1| AGR_C_1541p [Agrobacterium tumefaciens str. C58] Length = 328 Score = 37.8 bits (87), Expect = 0.15 Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 27/151 (17%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGD 60 +E+ Q +P I + + L L ++ + I+ Y + G G + + Sbjct: 178 QEVSYQTAEAPGTIVVDTRQHFLYLVQSG----GKAIR-YGVGLGRDGYAWSGRGKIQWK 232 Query: 61 FQ----SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG----YTGKYLM--IHGAC 110 + +P + +L S + G N A GK + +HG Sbjct: 233 AKWPRWTPPDEMVKRQPELTSISAANGGMTPGLNNPLG-ARALYIFKDGKDTLYRVHGTP 291 Query: 111 V--------SVGCYAMTDAQIDEIFAFVRDA 133 S GC M + + +++ V Sbjct: 292 DWQSVGKATSSGCVRMLNQDVIDLYERVPQG 322 >gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Nocardia farcinica IFM 10152] Length = 326 Score = 37.8 bits (87), Expect = 0.15 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 26/113 (23%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ--PNQLNPDSRYYLAINIGFPNAY- 93 +++K+ P G ++P G Y V Q+ DS Y + I P Y Sbjct: 201 GEVVKTMPTSLGKPG---------HETPNGTYIVGERHRQMVMDSSTYG-VPIDAPEGYK 250 Query: 94 -DRAHGY--TGKYLMIHGACV----------SVGCYAMTDAQIDEIFAFVRDA 133 D + + + +H A S GC ++ F + Sbjct: 251 LDVEYATRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKG 303 >gi|17937039|ref|NP_533828.1| hypothetical protein Atu3331 [Agrobacterium tumefaciens str. C58] Length = 261 Score = 37.8 bits (87), Expect = 0.15 Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 31/154 (20%) Query: 6 LKQQLPGS----PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRRE 58 L+Q +P P I + L L Y + G G + Sbjct: 72 LRQMVPNPTGERPGVIVVDTANHFLYLTYEDGQAM-----RYGVGLGRAGFEWAGRGVIQ 126 Query: 59 GDFQ----SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG----YTGKY--LMIHG 108 Q +P + +L P S + G N A GK +HG Sbjct: 127 YKRQWPRWTPPDEMIARQPELEPYSGRNGGMEPGLKNPLG-ARALYIFKDGKDTIYRLHG 185 Query: 109 AC--------VSVGCYAMTDAQIDEIFAFVRDAF 134 + VS GC + + I ++++ V D Sbjct: 186 SPEWWTIGKSVSSGCVRLLNQDIVDLYSRVPDGT 219 >gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Nocardia farcinica IFM 10152] Length = 253 Score = 37.8 bits (87), Expect = 0.15 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 24/112 (21%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-PDSRYYLAINIGFPNAY-- 93 Q++++ P G F++P G + V + + I + P Y Sbjct: 144 GQVVRTMPASMGKPG---------FETPTGTFPVLEKFRSIVFDSRTIGIPLSSPEGYLI 194 Query: 94 DRAHGY--TGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDA 133 D + T + +H A S GC ++ + V Sbjct: 195 DGEYAVRLTWGGVFVHSAPWSVDSQGYANVSHGCINLSPDDAAWYYNTVGIG 246 >gi|68003733|ref|ZP_00536279.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 482 Score = 37.8 bits (87), Expect = 0.15 Identities = 23/155 (14%), Positives = 42/155 (27%), Gaps = 39/155 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG---FYS---- 69 I + + L++ K G + +YP+ G+G K R +P G Y Sbjct: 170 IVVNVA--TMRLFQYKGDGASLAVSTYPV-----GVGTKER----PTPTGPTRVYRKAAR 218 Query: 70 --------VQPNQLNPDSRYYLAINIGFP---NAYDRAHGYTGKYLMIHGAC-------- 110 + + + G Y G +IHG Sbjct: 219 PTWHVPASIAEDHRKKGDPLPPEVPPGPENPLGEYALYLSKPGY--LIHGTNKPASIGLK 276 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + GC + I+ ++ + I Sbjct: 277 ATNGCMRLYPENIEVLYNDTPVNTPVAIVNQPYLI 311 >ErfK_YbiS_YhnG_Q8G821_57-179_PF03734.4 Length = 123 Score = 37.8 bits (87), Expect = 0.16 Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 26/133 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S + +++ ++++ + Y +I S +P G Y + Sbjct: 2 SDLSVKVSIAKQEVYVQSGGET-IYTMIAS----TGLNDT----------TPRGNYVIGM 46 Query: 73 NQ---LNP----DSRYYLAINIGFPNAYDRAHGYTGKYLMIHG----ACVSVGCYAMTDA 121 NP + Y++ N F +G+Y+ G S GC +T A Sbjct: 47 RGDHFYNPAEGMGADYWVRFNGPFLFHSVPTGANSGEYMEEEGNKLGQPASHGCVRLTVA 106 Query: 122 QIDEIFAFVRDAF 134 + + + + Sbjct: 107 DAEWFYNQIPEGT 119 >gi|21110266|gb|AAM38705.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 263 Score = 37.8 bits (87), Expect = 0.16 Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 17/88 (19%) Query: 2 VSKELKQQLPGSPVYIRIFKEE-----RKLELWKAKMGGEYQLIKSYPICKWSGGL---- 52 ++ L + I + + +L + G +S+ + G Sbjct: 28 IAASPIDALNHARTLIVVTTADWDSTQARLRTFTRVDGKWQPAAQSFAVALGRHGSAWGE 87 Query: 53 --------GPKRREGDFQSPEGFYSVQP 72 GP++REGD +SP G +++ P Sbjct: 88 GLHPAQMQGPQKREGDGRSPAGVFAIGP 115 >gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 351 Score = 37.8 bits (87), Expect = 0.16 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 19/105 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + E++ ++ + LI I G ++P G +++ Sbjct: 58 PMAVIVSLTEQRAYAYRNGI-----LIGVSTISSGKPG---------HETPTGVFTILQK 103 Query: 74 QLNPDSRYYLAINIGFPNA--YDRAHGYTGKYLMIHGACVSVGCY 116 + S Y A + + +D + G + G S GC Sbjct: 104 DKDHRSSIYNAAPMPYQQRLTWDGVALHAGG---LPGYPESHGCV 145 >gi|23006804|ref|ZP_00048959.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 175 Score = 37.8 bits (87), Expect = 0.17 Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 27/145 (18%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P + + P +P I + ++R+L L + Y + G K Sbjct: 32 PKYRRQEVAYTGPEAPGTIVVDIDKRQLALVQEGGTAI-----RYGVGVGKAGFSWK--- 83 Query: 59 GDFQSPE-GFY-----SVQPNQLNPDSRYYLAINIGFP---NAYDRAHGYTGKYL----- 104 GD + G + + LNP I P A G + Sbjct: 84 GDARIARKGVWPDWSPTTTMVSLNPGIERSRKGGIDNPLGARALYLYQGQPRHPVPHPRH 143 Query: 105 ---MIHGACVSVGCYAMTDAQIDEI 126 G +S GC M + I ++ Sbjct: 144 QRAWSIGEQMSSGCVRMHNEDIVDL 168 >gi|27375732|ref|NP_767261.1| hypothetical protein blr0621 [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 37.8 bits (87), Expect = 0.17 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 7/62 (11%) Query: 44 PICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY 103 P+ GG+ +REGD +P G + P +L + P + A TG+ Sbjct: 52 PVALGRGGILANKREGDGGTPRGSFR--PRRLWWRGDRH-----SRPQTFLPARIITGED 104 Query: 104 LM 105 Sbjct: 105 AW 106 >gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 255 Score = 37.8 bits (87), Expect = 0.18 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 9/63 (14%) Query: 83 LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 + G N Y G IHG VS GC +T+ ++++F Sbjct: 161 RFMAGGPGNPLGARAMYLGSTTYRIHGTNDPSTIGKFVSSGCIRLTNEDVEDLFGRTGIG 220 Query: 134 FVG 136 Sbjct: 221 TRV 223 >gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 435 Score = 37.4 bits (86), Expect = 0.20 Identities = 31/166 (18%), Positives = 48/166 (28%), Gaps = 43/166 (25%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L LP +P I I + L++ K G + +YP+ G+G K R + Sbjct: 109 PLNFILPDAPRKGIVINLA--TMRLFQFKENGGALAVSTYPV-----GIGTKER----PT 157 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY----------------TGKYLMIH 107 P+G V P +I D + +IH Sbjct: 158 PQGPTRVARKASRPTWYVPASIAEDHRKKGDILPARVPPGPENPLGDYALYLSRSGYLIH 217 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 G S GC + I+ +F + V I Sbjct: 218 GTNKPASIGLKASNGCMRLYPEHIEVLF-------RDTAVNTPVLI 256 >ErfK_YbiS_YhnG_Q89E58_121-252_PF03734.4 Length = 132 Score = 37.4 bits (86), Expect = 0.21 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG VS GC +T+ + +++ V+ Sbjct: 92 IHGTNKPDTIGKRVSSGCIRLTNEDVVDLYERVKVGAKV 130 >gi|69929707|ref|ZP_00626584.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 520 Score = 37.4 bits (86), Expect = 0.21 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 29/133 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ + A+ I P+ G K RE +P G +++ Sbjct: 57 AGEPIMAIVSLKSQQVTFYDAEGW-----ILRAPVS-----TGIKERE----TPAGVFAI 102 Query: 71 QPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC-----VSVGCYAMTDAQI 123 + S Y + PN L +HG S GC M Sbjct: 103 IEKDKDHHSTMYDDAWM----PNMQRITW----NGLALHGGPLPGYAASHGCVRMPYGFA 154 Query: 124 DEIFAFVRDAFVG 136 +++F R Sbjct: 155 EKLFDKTRIGMRV 167 >gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 37.4 bits (86), Expect = 0.21 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG VS GC +T+ + +++ V+ Sbjct: 212 IHGTNKPDTIGKRVSSGCIRLTNEDVVDLYERVKVGAKV 250 >ErfK_YbiS_YhnG_Q6N230_94-225_PF03734.4 Length = 132 Score = 37.4 bits (86), Expect = 0.22 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 9/63 (14%) Query: 83 LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 + G N Y G IHG VS GC +T+ ++++F Sbjct: 68 RFMAGGPGNPLGARAMYLGSTTYRIHGTNDPSTIGKFVSSGCIRLTNEDVEDLFGRTGIG 127 Query: 134 FVG 136 Sbjct: 128 TRV 130 >ErfK_YbiS_YhnG_YAT5_56-188_PF03734.4 Length = 133 Score = 37.4 bits (86), Expect = 0.22 Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPIC--KWSGGLGP--KRREGDFQSPE-- 65 G P+ + R L W A+ G S PI G +++EG +P Sbjct: 2 GKPMLV-ADTFSRALHYWNAEGGDHRIFPTSVPISDDLTKRGYTEIVRKKEGPSWTPTPS 60 Query: 66 --GFYS----VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMT 119 Y + P NP A+ + +P AY + + + G S GC + Sbjct: 61 QMARYPDWKPIGPGPDNPLG--THAMYLSWP-AYIIHGTHDTRKI---GRRSSDGCIGLY 114 Query: 120 DAQIDEIFAFVRDAFVG 136 + I E+F Sbjct: 115 NEMIAELFQLCPVGTRV 131 >gi|69926541|ref|ZP_00624012.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 354 Score = 37.4 bits (86), Expect = 0.22 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 9/63 (14%) Query: 83 LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 + G N Y G + IHG VS GC M + + ++F V+ Sbjct: 231 RFMAGGPGNPLGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGMLNEDVSDLFDRVKVG 290 Query: 134 FVG 136 Sbjct: 291 TRV 293 >gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 37.4 bits (86), Expect = 0.22 Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG +S GC +T+ +++ V+ + Sbjct: 161 IHGTNQPEYIGASISSGCIRLTNEDAIDLYGRVKVGTIV 199 >gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 371 Score = 37.4 bits (86), Expect = 0.23 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 9/63 (14%) Query: 83 LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 + G N Y G + IHG VS GC M + + ++F V+ Sbjct: 258 RFMAGGPGNPLGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGMLNEDVSDLFDRVKVG 317 Query: 134 FVG 136 Sbjct: 318 TRV 320 >ErfK_YbiS_YhnG_Q6NFS1_231-358_PF03734.4 Length = 128 Score = 37.0 bits (85), Expect = 0.26 Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 32/135 (23%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + + ++K Q + S P+ + +P G Y++ NP Sbjct: 8 VADDATKTMVIYKNG-----QQVNSMPVSMGANKW---------PTPNGIYTIGDK--NP 51 Query: 78 ----DSRYYLAIN--IGFPNAYDRAHGYTGKYLMIHGACV----------SVGCYAMTDA 121 DS Y + G+ A + + +H A S GC ++ Sbjct: 52 SLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGCINVSTD 111 Query: 122 QIDEIFAFVRDAFVG 136 +V+ + Sbjct: 112 NAAWFQNYVKRGDIV 126 >ErfK_YbiS_YhnG_Q5YU65_123-251_PF03734.4 Length = 129 Score = 37.0 bits (85), Expect = 0.27 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 24/112 (21%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-PDSRYYLAINIGFPNAY-- 93 Q++++ P G F++P G + V + + I + P Y Sbjct: 22 GQVVRTMPASMGKPG---------FETPTGTFPVLEKFRSIVFDSRTIGIPLSSPEGYLI 72 Query: 94 DRAHGY--TGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDA 133 D + T + +H A S GC ++ + V Sbjct: 73 DGEYAVRLTWGGVFVHSAPWSVDSQGYANVSHGCINLSPDDAAWYYNTVGIG 124 >gi|68172053|ref|ZP_00545336.1| hypothetical protein Francci3DRAFT_3996 [Frankia sp. CcI3] Length = 278 Score = 37.0 bits (85), Expect = 0.27 Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 36/118 (30%) Query: 48 WSGGLGPKRREGDFQSPEGFYSVQP---NQLNPDS--------RYYLAINIG---FPNA- 92 + G REGD +SP G +S+ +P + +Y A P+A Sbjct: 137 GADGWTYDHREGDLRSPIGVFSLTAAGGKLADPGTGLPYEYRPSFYRATGPRGEPMPDAF 196 Query: 93 -------YDRAHGYT------------GKYLMIH--GACVSVGCYAMTDAQIDEIFAF 129 Y+R GY G + +H + GC A+ + I + Sbjct: 197 NYVVAIDYNRLPGYPPSDPTRPLGPQIGGDIWLHVDHRSPTRGCIAVEQDALVAILRW 254 >ErfK_YbiS_YhnG_Q83BU9_47-172_PF03734.4 Length = 126 Score = 37.0 bits (85), Expect = 0.28 Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 23/131 (17%) Query: 22 EERKLELWKAKMG-----GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + +L ++ K +LIK + G PK + ++P G + + Sbjct: 1 QSGRLFVFDPKRHRWYAYQNGRLIKQGRASGGAYG-CPKNKSRSCRTPSGTFRIIRKGP- 58 Query: 77 PDSRYYLAINIGFPNAYDRAHGY----TGKYLMIHGAC------VSVGCYAMTDAQIDEI 126 P+ + +P + A + IHG+ S GC +T A + Sbjct: 59 PNCKSTR-----YPKPHGGARMDYCMCYHAFYCIHGSDHVPNYHASHGCIRVTPADARWL 113 Query: 127 F-AFVRDAFVG 136 F++ Sbjct: 114 SHNFIQYGTKV 124 >gi|56544165|gb|AAV90319.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 179 Score = 37.0 bits (85), Expect = 0.28 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 46 CKWSGGL--GPKRREGDFQSPEGFYSVQPNQLNPD 78 G+ K+REGD ++P G + V+ L PD Sbjct: 27 ALGKNGVIAADKKREGDNKTPLGCWPVRGALLRPD 61 >ErfK_YbiS_YhnG_Q89RZ1_67-201_PF03734.4 Length = 135 Score = 37.0 bits (85), Expect = 0.30 Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 8/39 (20%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG +S GC +T+ +++ V+ + Sbjct: 95 IHGTNQPEYIGASISSGCIRLTNEDAIDLYGRVKVGTIV 133 >gi|69937273|ref|ZP_00631965.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 164 Score = 37.0 bits (85), Expect = 0.30 Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 33/141 (23%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + R L W G+ + + YP + + G + + Sbjct: 34 AIVADTKSRALHFWS----GDEAIYRVYPTLV---PISDAL------TKRGHTEIVRKKE 80 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYT----GKYLM--------IHGACVS--------VGC 115 P + FP+ A G G + M IHG + C Sbjct: 81 GPGWTSTASQMERFPDWKPVAGGDPANPLGSHAMYLPWPASLIHGTHDTRKIGRLPSDSC 140 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 + + +I E+FA Sbjct: 141 IGLCNEKIAELFALCPVGTQV 161 >gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Bradyrhizobium japonicum USDA 110] Length = 401 Score = 36.6 bits (84), Expect = 0.32 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 9/63 (14%) Query: 83 LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 + G N Y G + IHG VS GC M + + ++F V+ Sbjct: 288 RFMAGGPGNPLGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGMLNEDVSDLFDRVKVG 347 Query: 134 FVG 136 Sbjct: 348 TRV 350 >gi|68175646|ref|ZP_00548886.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 464 Score = 36.6 bits (84), Expect = 0.32 Identities = 27/132 (20%), Positives = 43/132 (32%), Gaps = 33/132 (25%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEGFY---SVQ 71 + +++++ + QL+++ P+ L GP G +SPE +V Sbjct: 278 VDSATHTMKVFR-----DGQLLRTMPVSLGRPSLPSMDGPHNVLG--KSPEVIMDSATVG 330 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDA 121 Q NPD Y A YT +H A S GC + A Sbjct: 331 IPQGNPDYYYEK---------VQWAVNYTSGGQYVHSAPWSVPSQGRANVSHGCVNASPA 381 Query: 122 QIDEIFAFVRDA 133 + F R Sbjct: 382 DAQWFYNFTRLG 393 >gi|15024797|gb|AAK79787.1| Fusion of predicted Zn-dependent amidase/peptidase (cell wall hydrolase/DD-carboxypeptidase family) and uncharacterized domain of ErfK family; peptodoglycan-binding domain [Clostridium acetobutylicum ATCC 824] Length = 281 Score = 36.6 bits (84), Expect = 0.33 Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 22/128 (17%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ- 74 +I +E+++ ++ ++LI ++ + D + G + VQ Sbjct: 162 FIITSLKEQRVYVFNGDPHN-WKLINTFQCTSGAS---------DTPTITGRFYVQGKGL 211 Query: 75 --LNPDS---RYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 + +YY I + +D+ L GA +S GC + I Sbjct: 212 AFKTSNDVICKYYTQIQGNYLFHSILFDKNGNVVDGTL---GASLSHGCIRLAVQNAKYI 268 Query: 127 FAFVRDAF 134 + + Sbjct: 269 YDTLPMGT 276 >gi|69935211|ref|ZP_00630191.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 192 Score = 36.6 bits (84), Expect = 0.33 Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 8/39 (20%) Query: 104 LMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAF 134 + IHG VS GC M + + ++F V Sbjct: 149 IRIHGTTEPNSIGRAVSNGCIRMRNEAVMDLFEQVPIGT 187 >gi|69297918|ref|ZP_00620214.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 205 Score = 36.6 bits (84), Expect = 0.33 Identities = 5/29 (17%), Positives = 13/29 (44%) Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 G S GC + + +++++ V+ Sbjct: 174 GRQSSSGCIGLYNQHVEKLYPLVKVGTQV 202 >ErfK_YbiS_YhnG_Q97I32_158-280_PF03734.4 Length = 123 Score = 36.6 bits (84), Expect = 0.33 Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 22/128 (17%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ- 74 +I +E+++ ++ ++LI ++ + D + G + VQ Sbjct: 5 FIITSLKEQRVYVFNGDPHN-WKLINTFQCTSGAS---------DTPTITGRFYVQGKGL 54 Query: 75 --LNPDS---RYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 + +YY I + +D+ L GA +S GC + I Sbjct: 55 AFKTSNDVICKYYTQIQGNYLFHSILFDKNGNVVDGTL---GASLSHGCIRLAVQNAKYI 111 Query: 127 FAFVRDAF 134 + + Sbjct: 112 YDTLPMGT 119 >ErfK_YbiS_YhnG_Q8UH41_160-301_PF03734.4 Length = 142 Score = 36.6 bits (84), Expect = 0.33 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 27/143 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQ----SP 64 +P I + + L L ++ + I+ Y + G G + + + +P Sbjct: 1 EAPGTIVVDTRQHFLYLVQSG----GKAIR-YGVGLGRDGYAWSGRGKIQWKAKWPRWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG----YTGKYLM--IHGACV------- 111 + +L S + G N A GK + +HG Sbjct: 56 PDEMVKRQPELTSISAANGGMTPGLNNPLG-ARALYIFKDGKDTLYRVHGTPDWQSVGKA 114 Query: 112 -SVGCYAMTDAQIDEIFAFVRDA 133 S GC M + + +++ V Sbjct: 115 TSSGCVRMLNQDVIDLYERVPQG 137 >gi|3462874|gb|AAC34464.1| unknown [Rhizobium etli] Length = 106 Score = 36.6 bits (84), Expect = 0.34 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 18/91 (19%) Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVG 114 +P G +S + + SR + NA + +H G S G Sbjct: 24 TPTGSWSAKWLSRDHSSR-------KYDNAPMPYAVFFNGGYAVHATFDLKRLGRPASHG 76 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 C + E F+ R A G + +V I Sbjct: 77 CVRLHPDNAAEFFSLARQA---GLANTRVVI 104 >ErfK_YbiS_YhnG_O86068_2-104_PF03734.4 Length = 103 Score = 36.6 bits (84), Expect = 0.35 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 18/91 (19%) Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVG 114 +P G +S + + SR + NA + +H G S G Sbjct: 23 TPTGSWSAKWLSRDHSSR-------KYDNAPMPYAVFFNGGYAVHATFDLKRLGRPASHG 75 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 C + E F+ R A G + +V I Sbjct: 76 CVRLHPDNAAEFFSLARQA---GLANTRVVI 103 >gi|13471264|ref|NP_102833.1| hypothetical protein mll1184 [Mesorhizobium loti MAFF303099] Length = 143 Score = 36.6 bits (84), Expect = 0.35 Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 15/87 (17%) Query: 63 SPEGFYSVQPNQLNPDSR--------YYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 +P G Y Q SR Y + + G+ HG + G S G Sbjct: 61 TPRGTYRPQRTARMWYSRKYDMSPMPYSVFFHGGY-----AIHGT--GAVRQLGRPASHG 113 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSV 141 C + A +A VR+ G V Sbjct: 114 CVRLHTANAATFYAMVREVGFGNTRIV 140 >ErfK_YbiS_YhnG_Q8UAP2_82-223_PF03734.4 Length = 142 Score = 36.6 bits (84), Expect = 0.38 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 27/139 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQ----SPEGFYS 69 I + L L + Q ++ Y + G G + Q +P Sbjct: 6 IVVDTANHFLYL----TYEDGQAMR-YGVGLGRAGFEWAGRGVIQYKRQWPRWTPPDEMI 60 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHG----YTGKY--LMIHGAC--------VSVGC 115 + +L P S + G N A GK +HG+ VS GC Sbjct: 61 ARQPELEPYSGRNGGMEPGLKNPLG-ARALYIFKDGKDTIYRLHGSPEWWTIGKSVSSGC 119 Query: 116 YAMTDAQIDEIFAFVRDAF 134 + + I ++++ V D Sbjct: 120 VRLLNQDIVDLYSRVPDGT 138 >gi|15155832|gb|AAK86652.1| AGR_C_1542p [Agrobacterium tumefaciens str. C58] Length = 261 Score = 36.6 bits (84), Expect = 0.39 Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 29/143 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------------PKRRE 58 P + + R L + + Y + G PK Sbjct: 118 ERPGTVVVDTRSRFLYVVEQGGSAM-----RYGVGIGRDGFAWSGEGVIQWRQKWPKWTP 172 Query: 59 GDF---QSPEGF-YS-----VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA 109 D + PE YS + P NP L I + R HG + G Sbjct: 173 PDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSI--GK 230 Query: 110 CVSVGCYAMTDAQIDEIFAFVRD 132 VS GC + + + +++ V Sbjct: 231 AVSSGCVRLMNQDVIDLYDRVPQ 253 >gi|39983561|gb|AAR34954.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sulfurreducens PCA] Length = 309 Score = 36.3 bits (83), Expect = 0.44 Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 28/134 (20%) Query: 1 PVSKELKQQLPGSPV--YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P+ KE + P YI + E+ + ++ L S P G Sbjct: 127 PLPKEYE---PAKRYAKYILVSLTEQWIGAYERG-----TLKFSMPAATGKKG------- 171 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYL--MIH-----GA 109 ++P G + + S Y + +P Y + + IH G Sbjct: 172 --NETPTGLFRIDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGK 229 Query: 110 CVSVGCYAMTDAQI 123 S GC + D + Sbjct: 230 PASHGCVGLFDEPM 243 >gi|69300858|ref|ZP_00622319.1| similar to Uncharacterized protein conserved in bacteria [Silicibacter sp. TM1040] Length = 151 Score = 36.3 bits (83), Expect = 0.46 Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 9/62 (14%) Query: 44 PICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY 103 P GGL +REGD +P G + + PD I P D A Sbjct: 6 PCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPD-------RISAPQ--DWARPILPGD 56 Query: 104 LM 105 L Sbjct: 57 LW 58 >gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter pomeroyi DSS-3] Length = 185 Score = 36.3 bits (83), Expect = 0.46 Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 8/40 (20%) Query: 106 IHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 IHG S GC M + + +++ V V Sbjct: 144 IHGTTQPQTIGHAASNGCIRMLNEHVIDLYNRVPLGTVVT 183 >gi|15022829|gb|AAK77998.1| Uncharacterized conserved of ErfK family [Clostridium acetobutylicum ATCC 824] Length = 286 Score = 36.3 bits (83), Expect = 0.47 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 26/143 (18%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + S I + + L +++ + + IK G G + +E +P G Sbjct: 145 GLKYINSDTLIDVNITSQSLNVYRNNVILNKEPIKCST-----GIKGDEYKE----TPMG 195 Query: 67 FYSVQPN------QLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIH---------GA 109 ++++ + ++ Y F N+ G ++ G Sbjct: 196 IFTIKKKVQNLSNKREGENAMYGMEFFGDYFINSVSFNEIKKGGKIVYDENIREKNNLGK 255 Query: 110 CVSVGCYAMTDAQIDEIFAFVRD 132 C + G ++ A I+ V D Sbjct: 256 CDTNGGIRLSIADSQYIYNLVTD 278 >ErfK_YbiS_YhnG_Q8NMT9_240-368_PF03734.4 Length = 129 Score = 36.3 bits (83), Expect = 0.49 Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 36/139 (25%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--QL 75 + + ++K +L+++ P+ ++ +P G Y + + Sbjct: 7 VADDATKTMSVYKNG-----ELLRTMPVSFGRD-------TSEWATPNGTYIIGDRNESM 54 Query: 76 NPDSRYYLAINIGF-------PNAYDRAHGYTGKYLMIHGACV----------SVGCYAM 118 DS +G+ P Y Y+G + +H A S GC + Sbjct: 55 IMDS---TTFGLGYEEGGYRTPVKYATQMSYSG--IYVHAAPWSVGAQGSYNTSHGCINV 109 Query: 119 TDAQIDEIFAFVRDAFVGG 137 + V+ + Sbjct: 110 STENAQWFQEAVKRGDIVT 128 >gi|15608571|ref|NP_215949.1| POSSIBLE CONSERVED EXPORTED PROTEIN [Mycobacterium tuberculosis H37Rv] Length = 271 Score = 36.3 bits (83), Expect = 0.53 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 21/89 (23%) Query: 63 SPEGFYSVQPNQLN--PDSRYYLAINI------GFPNAYDRAHGYTGKYLMIHGACV--- 111 +P G Y+V + + DS ++ I G+ + D A T + L +H A Sbjct: 179 TPVGSYTVLSKERSVIMDSS---SVGIPVDDPDGYRLSVDYAVRITSRGLYVHSAPWALP 235 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDA 133 S GC +++ + + V Sbjct: 236 ALGLENVSHGCISLSREDAEWYYNAVDIG 264 >ErfK_YbiS_YhnG_Q74CU1_138-290_PF03734.4 Length = 153 Score = 35.9 bits (82), Expect = 0.54 Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 23/117 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 YI + E+ + ++ L S P G ++P G + + Sbjct: 4 YILVSLTEQWIGAYERG-----TLKFSMPAATGKKG---------NETPTGLFRIDARDR 49 Query: 76 NPDSRYYLA--INIGFPNAYDRAHGYTGKYL--MIH-----GACVSVGCYAMTDAQI 123 S Y + +P Y + + IH G S GC + D + Sbjct: 50 THTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFDEPM 106 >gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodopseudomonas palustris CGA009] Length = 519 Score = 35.9 bits (82), Expect = 0.55 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 29/133 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ L+ ++ I P+ + G ++P G ++V Sbjct: 54 AGEPIMAIVSIKGQRVTLYDSEGW-----IYRAPVSTGTTG---------RETPAGVFAV 99 Query: 71 QPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHG-----ACVSVGCYAMTDAQI 123 + S Y + PN + +HG S GC M Sbjct: 100 VEKDKDHRSTMYDDAWM----PNMQRITW----NGVALHGGPLPGYPASHGCVRMPYEFA 151 Query: 124 DEIFAFVRDAFVG 136 +++F R Sbjct: 152 EKLFDKTRIGMRV 164 >gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 35.9 bits (82), Expect = 0.56 Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 8/34 (23%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVR 131 IHG +S GC M + + +++ V+ Sbjct: 160 IHGTNQPEYIGQAISSGCIRMRNEDVIDLYDRVK 193 >gi|75908663|ref|YP_322959.1| ErfK/YbiS/YcfS/YnhG [Anabaena variabilis ATCC 29413] Length = 170 Score = 35.9 bits (82), Expect = 0.56 Identities = 20/129 (15%), Positives = 34/129 (26%), Gaps = 31/129 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE--GFYSVQPN 73 +I+I ++L W+ Y I SG +P G + +Q Sbjct: 57 WIQINLANQRLTAWEGGKPV-------YAIVISSGK---------RSTPTRIGSFKIQSK 100 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDE 125 + R + + IHG VS GC + Sbjct: 101 HKSTRMR-----GRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKW 155 Query: 126 IFAFVRDAF 134 +F + Sbjct: 156 LFNWASLGT 164 >ErfK_YbiS_YhnG_Q89MH4_65-200_PF03734.4 Length = 136 Score = 35.9 bits (82), Expect = 0.58 Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 8/34 (23%) Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVR 131 IHG +S GC M + + +++ V+ Sbjct: 96 IHGTNQPEYIGQAISSGCIRMRNEDVIDLYDRVK 129 >ErfK_YbiS_YhnG_Q5LWA4_42-184_PF03734.4 Length = 143 Score = 35.9 bits (82), Expect = 0.59 Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 8/40 (20%) Query: 106 IHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 IHG S GC M + + +++ V V Sbjct: 103 IHGTTQPQTIGHAASNGCIRMLNEHVIDLYNRVPLGTVVT 142 >gi|18144285|dbj|BAB80332.1| hypothetical protein [Clostridium perfringens str. 13] Length = 454 Score = 35.9 bits (82), Expect = 0.61 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 46/150 (30%) Query: 27 ELWKAKMGGEYQLIKSYPICKWSGGLG--PKRREGDFQSPEGFYSVQ------------- 71 E+++ GE+ I S + GL R + +P G S+ Sbjct: 284 EIYEKNDSGEWNNIDSTTGRVGANGLAYIENRVQSTNTTPAGVMSITGAFGVKNNPGTKL 343 Query: 72 ----------PNQLNPDSRYYLAIN----------IGFPNAY------DRAHGY---TGK 102 + + +S Y IN I +P Y D H G Sbjct: 344 DYIKVNNNMYWDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGG 403 Query: 103 YLMIH--GACVSVGCYAMTDAQIDEIFAFV 130 + +H G + GC +M ++ EI ++ Sbjct: 404 AIFVHCLGRGATGGCVSMPREKMIEILKWI 433 >gi|33639293|emb|CAE08301.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 99 Score = 35.9 bits (82), Expect = 0.65 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 17/72 (23%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 + I + R++ + +A Q + +P+ +P+G +++ Sbjct: 16 DIRIVLDLGRRQISVIRAG-----QRLGPWPVAIGDAQT---------PTPKGTFTIVSK 61 Query: 74 QLNPDSRYYLAI 85 Q+NP YL+I Sbjct: 62 QVNP---VYLSI 70 >ErfK_YbiS_YhnG_Q6N3T2_113-244_PF03734.4 Length = 132 Score = 35.9 bits (82), Expect = 0.66 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 9/63 (14%) Query: 83 LAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 + G N Y G + IHG VS GC M + + ++F + Sbjct: 68 RFMAGGPGNPMGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGMLNDDVSDLFERAKVG 127 Query: 134 FVG 136 Sbjct: 128 TRV 130 >ErfK_YbiS_YhnG_Q92K56_83-221_PF03734.4 Length = 139 Score = 35.5 bits (81), Expect = 0.70 Identities = 31/150 (20%), Positives = 42/150 (28%), Gaps = 42/150 (28%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I + L L + Q I+ Y I G G ++ E P Sbjct: 3 PGTIIIDGNQHFLYLVQPG----GQAIR-YGIGVGREGFGWAGIVRVGRTAEWPTWTPPP 57 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGK----------YLM---------IHGA----- 109 ++ PNA A G G YL IHG Sbjct: 58 EMVARD----------PNAAKWAGGMPGGPDNPLGARALYLYEGDNDTIYRIHGTVEPWT 107 Query: 110 ---CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + I ++ + V Sbjct: 108 IGLDVSSGCIRMNNDDIIDLHSRVGVGAKV 137 >ErfK_YbiS_YhnG_Q98L44_27-141_PF03734.4 Length = 115 Score = 35.5 bits (81), Expect = 0.71 Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 15/87 (17%) Query: 63 SPEGFYSVQPNQLNPDSR--------YYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 +P G Y Q SR Y + + G+ HG + G S G Sbjct: 35 TPRGTYRPQRTARMWYSRKYDMSPMPYSVFFHGGY-----AIHGT--GAVRQLGRPASHG 87 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSV 141 C + A +A VR+ G V Sbjct: 88 CVRLHTANAATFYAMVREVGFGNTRIV 114 >gi|46191772|ref|ZP_00008016.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 176 Score = 35.5 bits (81), Expect = 0.71 Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 G S GC + + I ++F + Sbjct: 145 GRKSSNGCIGLYNEHIQQLFPLAKVGTQV 173 >gi|69929507|ref|ZP_00626384.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 96 Score = 35.5 bits (81), Expect = 0.73 Identities = 15/88 (17%), Positives = 23/88 (26%), Gaps = 22/88 (25%) Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-----KYLMI---------HGACV--- 111 V NP RY A + ++ G + I HG Sbjct: 2 KVTEINRNPTYRYNPAYHFKGVHSRKPFTIRPGPNNPVGTIWINLSIEGYGIHGTPFPGK 61 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAF 134 S GC +T+ + + V Sbjct: 62 VSKSESHGCVRLTNWDAERVAQRVSKGT 89 >gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesorhizobium loti MAFF303099] Length = 277 Score = 35.5 bits (81), Expect = 0.73 Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 25/142 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQ----SPE 65 P I + L L + Q I+ Y + G G + + +P Sbjct: 94 KPGTIIVDTTGHFLYLVRPG----GQAIR-YGVGLGRAGFEWSGDAVVQWKQKWPKWTPP 148 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VS 112 + +L P S + G N Y + +HG+ VS Sbjct: 149 DEMIARQPELKPYSADNGGMPGGLKNPLGARALYLFQGNVDTLYRLHGSPEWKSIGKSVS 208 Query: 113 VGCYAMTDAQIDEIFAFVRDAF 134 GC + + I +++ V Sbjct: 209 SGCVRLMNQDIIDLYDRVPSKT 230 >ErfK_YbiS_YhnG_Q98JD1_93-231_PF03734.4 Length = 139 Score = 35.5 bits (81), Expect = 0.74 Identities = 26/145 (17%), Positives = 41/145 (28%), Gaps = 28/145 (19%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG-------PKRREGDFQSP 64 P I I + L L Q Y I G G + E +P Sbjct: 1 EQPGTIIIDGNQHFLYLV-----QPGQQAIRYGIGVGRDGFGWAGIVKVGRMAEWPTWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDR--AHGYTGKY---LMIHGAC--------V 111 + + P + + G N + Y G + IHG V Sbjct: 56 PAEMVARDPKARPWANG---MPGGPDNPLGARALYLYEGDHDTIYRIHGTPEPWTIGLDV 112 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + I ++ + ++ Sbjct: 113 SSGCIRMNNGDIIDLHSRIKVGAKV 137 >ErfK_YbiS_YhnG_Q97N27_150-284_PF03734.4 Length = 135 Score = 35.5 bits (81), Expect = 0.81 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S I + + L +++ + + IK G G + +E +P G ++++ Sbjct: 1 NSDTLIDVNITSQSLNVYRNNVILNKEPIKCST-----GIKGDEYKE----TPMGIFTIK 51 Query: 72 PN------QLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIH---------GACVSVG 114 + ++ Y F N+ G ++ G C + G Sbjct: 52 KKVQNLSNKREGENAMYGMEFFGDYFINSVSFNEIKKGGKIVYDENIREKNNLGKCDTNG 111 Query: 115 CYAMTDAQIDEIFAFVRD 132 ++ A I+ V D Sbjct: 112 GIRLSIADSQYIYNLVTD 129 >ErfK_YbiS_YhnG_Q6N3B5_55-166_PF03734.4 Length = 112 Score = 35.5 bits (81), Expect = 0.83 Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 29/132 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P+ + + +++ L+ ++ I P+ + G ++P G ++V Sbjct: 1 GEPIMAIVSIKGQRVTLYDSEGW-----IYRAPVSTGTTG---------RETPAGVFAVV 46 Query: 72 PNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHG-----ACVSVGCYAMTDAQID 124 + S Y + PN + +HG S GC M + Sbjct: 47 EKDKDHRSTMYDDAWM----PNMQRITW----NGVALHGGPLPGYPASHGCVRMPYEFAE 98 Query: 125 EIFAFVRDAFVG 136 ++F R Sbjct: 99 KLFDKTRIGMRV 110 >gi|15075086|emb|CAC46643.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti] Length = 232 Score = 35.5 bits (81), Expect = 0.83 Identities = 31/150 (20%), Positives = 42/150 (28%), Gaps = 42/150 (28%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I + L L + Q I+ Y I G G ++ E P Sbjct: 85 PGTIIIDGNQHFLYLVQPG----GQAIR-YGIGVGREGFGWAGIVRVGRTAEWPTWTPPP 139 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGK----------YLM---------IHGA----- 109 ++ PNA A G G YL IHG Sbjct: 140 EMVARD----------PNAAKWAGGMPGGPDNPLGARALYLYEGDNDTIYRIHGTVEPWT 189 Query: 110 ---CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + I ++ + V Sbjct: 190 IGLDVSSGCIRMNNDDIIDLHSRVGVGAKV 219 >gi|17933973|ref|NP_530763.1| hypothetical protein Atu0048 [Agrobacterium tumefaciens str. C58] Length = 261 Score = 35.5 bits (81), Expect = 0.85 Identities = 7/26 (26%), Positives = 13/26 (50%) Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDA 133 G S GC M + + ++++ VR Sbjct: 227 GTAASSGCIRMINQDVIDLYSRVRPG 252 >ErfK_YbiS_YhnG_O06825_123-269_PF03734.4 Length = 147 Score = 35.1 bits (80), Expect = 0.93 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 21/89 (23%) Query: 63 SPEGFYSVQPNQLN--PDSRYYLAINI------GFPNAYDRAHGYTGKYLMIHGACV--- 111 +P G Y+V + + DS ++ I G+ + D A T + L +H A Sbjct: 57 TPVGSYTVLSKERSVIMDSS---SVGIPVDDPDGYRLSVDYAVRITSRGLYVHSAPWALP 113 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDA 133 S GC +++ + + V Sbjct: 114 ALGLENVSHGCISLSREDAEWYYNAVDIG 142 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor... 258 5e-68 gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Brady... 256 3e-67 gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmone... 252 3e-66 DUF949_Q83M88_30-229_PF06104.2 252 3e-66 gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizob... 252 5e-66 DUF949_Q89XW3_52-252_PF06104.2 250 2e-65 DUF949_Q92JZ0_45-245_PF06104.2 249 3e-65 gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [M... 249 4e-65 gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodo... 247 1e-64 gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [M... 245 6e-64 gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitr... 244 8e-64 gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefacien... 243 2e-63 gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melite... 242 3e-63 gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia p... 242 4e-63 gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia c... 241 7e-63 gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF94... 241 7e-63 gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesor... 240 1e-62 DUF949_Q8YJP4_41-241_PF06104.2 239 3e-62 DUF949_Q66E07_28-227_PF06104.2 239 3e-62 gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Barto... 238 4e-62 DUF949_Q98FX6_1-193_PF06104.2 238 5e-62 gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella qui... 238 5e-62 DUF949_Q7CS68_57-257_PF06104.2 238 5e-62 DUF949_Q6D1H5_32-231_PF06104.2 237 1e-61 DUF949_Q7CSY6_66-266_PF06104.2 236 2e-61 gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefacien... 235 5e-61 gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salm... 234 1e-60 DUF949_Q6G1P2_42-242_PF06104.2 233 3e-60 gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein ... 232 4e-60 DUF949_Q57JI8_39-239_PF06104.2 232 6e-60 DUF949_Q6G1H8_42-242_PF06104.2 230 2e-59 gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photo... 229 4e-59 DUF949_Q7N7F5_31-231_PF06104.2 225 4e-58 gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein ... 205 8e-52 gi|54297427|ref|YP_123796.1| Legionella secretion system protein... 152 5e-36 gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesor... 140 2e-32 gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudo... 140 2e-32 gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] 139 4e-32 ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 139 5e-32 gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 136 4e-31 gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 135 5e-31 gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 135 6e-31 gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pse... 134 2e-30 ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 133 3e-30 gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii] 133 3e-30 gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 133 4e-30 gi|75186790|ref|ZP_00700057.1| COG1376: Uncharacterized protein ... 132 4e-30 ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 132 5e-30 DUF949_Q60B45_95-280_PF06104.2 132 6e-30 gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella f... 132 6e-30 gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [S... 131 7e-30 gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseu... 131 9e-30 gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methy... 131 9e-30 gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 131 1e-29 gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia s... 131 1e-29 gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 131 1e-29 gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella a... 131 1e-29 ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 131 1e-29 ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 130 2e-29 gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella b... 130 2e-29 gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdello... 130 2e-29 gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmo... 130 2e-29 gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein ... 129 4e-29 gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella bur... 129 5e-29 gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein ... 128 6e-29 gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Ery... 128 7e-29 gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 128 1e-28 gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein ... 128 1e-28 gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 127 1e-28 gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 127 2e-28 gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdello... 127 2e-28 gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewan... 126 4e-28 gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella d... 125 5e-28 ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 125 7e-28 gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 125 7e-28 gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 125 7e-28 gi|69950815|ref|ZP_00638633.1| Peptidoglycan-binding LysM:ErfK/Y... 124 9e-28 gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protei... 124 9e-28 DUF949_Q6LJZ6_66-236_PF06104.2 124 1e-27 gi|37675934|ref|NP_936330.1| uncharacterized protein conserved i... 124 2e-27 gi|69945495|ref|ZP_00636533.1| Peptidoglycan-binding LysM:ErfK/Y... 123 3e-27 gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein ... 122 3e-27 gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein ... 122 4e-27 gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 122 4e-27 gi|68515740|gb|EAN39455.1| Peptidoglycan-binding LysM:ErfK/YbiS/... 122 5e-27 gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmo... 122 5e-27 gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Pho... 122 5e-27 gi|24375244|ref|NP_719287.1| LysM domain protein [Shewanella one... 122 6e-27 ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 122 7e-27 gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigel... 121 7e-27 ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 121 8e-27 gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibri... 121 1e-26 gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 121 1e-26 gi|49610290|emb|CAG73734.1| putative exported protein [Erwinia c... 120 2e-26 ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 119 3e-26 ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 119 3e-26 gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 119 3e-26 gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein ... 119 4e-26 gi|68543641|ref|ZP_00583338.1| Peptidoglycan-binding LysM:ErfK/Y... 119 4e-26 gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 118 9e-26 gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibri... 118 9e-26 gi|69926066|ref|ZP_00623537.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 118 1e-25 gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 116 2e-25 gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulf... 116 3e-25 gi|26247257|ref|NP_753297.1| Hypothetical protein ycfS precursor... 115 5e-25 gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitros... 115 8e-25 gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Brady... 114 9e-25 gi|12515680|gb|AAG56665.1| orf, hypothetical protein [Escherichi... 114 1e-24 gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yers... 114 2e-24 gi|71548630|ref|ZP_00668854.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 114 2e-24 gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 113 2e-24 gi|71282503|ref|YP_270846.1| LysM domain /ErfK/YbiS/YcfS/YnhG do... 113 2e-24 gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Brady... 112 3e-24 gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibri... 112 3e-24 gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesor... 112 4e-24 gi|75855745|ref|ZP_00763388.1| COG1376: Uncharacterized protein ... 112 4e-24 gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein ... 112 4e-24 gi|68189671|gb|EAN04335.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 112 4e-24 gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 112 5e-24 gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein ... 112 5e-24 gi|69926259|ref|ZP_00623730.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 112 5e-24 gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein ... 112 5e-24 ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 111 1e-23 gi|67675669|ref|ZP_00472424.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 111 1e-23 gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 111 1e-23 gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmo... 111 1e-23 gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 111 2e-23 gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein ... 110 2e-23 gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Brady... 110 3e-23 gi|17989404|ref|NP_542037.1| PROTEIN YBIS PRECURSOR [Brucella me... 109 3e-23 gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/Y... 109 3e-23 gi|66857904|ref|ZP_00401942.1| Peptidoglycan-binding LysM:ErfK/Y... 109 3e-23 gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein ... 109 5e-23 gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax f... 109 6e-23 gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovi... 109 6e-23 gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdello... 109 6e-23 gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 108 7e-23 gi|15074524|emb|CAC46170.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [... 107 1e-22 ErfK_YbiS_YhnG_Q89E55_71-202_PF03734.4 107 1e-22 gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein ... 107 1e-22 gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesor... 107 1e-22 ErfK_YbiS_YhnG_Q8FX96_108-243_PF03734.4 107 1e-22 gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia end... 107 2e-22 gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 107 2e-22 ErfK_YbiS_YhnG_Q89DB0_182-313_PF03734.4 107 2e-22 DUF949_Q83XL8_75-191_PF06104.2 106 3e-22 gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct] 106 3e-22 gi|37676018|ref|NP_936414.1| uncharacterized protein conserved i... 106 4e-22 gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Bruce... 106 4e-22 ErfK_YbiS_YhnG_Q6NAN8_135-266_PF03734.4 106 4e-22 gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 106 5e-22 gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legio... 105 6e-22 gi|71674299|ref|ZP_00672046.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 105 6e-22 gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 105 6e-22 gi|68004185|ref|ZP_00536684.1| Peptidoglycan-binding LysM:ErfK/Y... 105 8e-22 gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:Er... 105 9e-22 gi|67153406|ref|ZP_00415151.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 104 1e-21 gi|71674300|ref|ZP_00672047.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 104 1e-21 gi|15073711|emb|CAC45353.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 104 1e-21 gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted p... 104 1e-21 gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted p... 104 1e-21 gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Brady... 104 1e-21 gi|15074019|emb|CAC45666.1| CONSERVED HYPOTHETICAL PROTEIN [Sino... 104 2e-21 ErfK_YbiS_YhnG_Q89BG8_76-215_PF03734.4 103 2e-21 gi|75818411|ref|ZP_00748578.1| COG1376: Uncharacterized protein ... 103 3e-21 gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Cand... 102 5e-21 gi|17936219|ref|NP_533009.1| hypothetical protein Atu2336 [Agrob... 102 5e-21 gi|71836515|ref|ZP_00676284.1| Peptidoglycan-binding LysM:ErfK/Y... 102 5e-21 gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan bi... 102 6e-21 gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylo... 102 6e-21 gi|67916612|ref|ZP_00510315.1| ErfK/YbiS/YcfS/YnhG [Clostridium ... 102 6e-21 ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 102 7e-21 ErfK_YbiS_YhnG_Q92PX9_54-192_PF03734.4 101 1e-20 gi|23129994|ref|ZP_00111815.1| COG1376: Uncharacterized protein ... 101 1e-20 ErfK_YbiS_YhnG_Q82U48_98-240_PF03734.4 101 1e-20 ErfK_YbiS_YhnG_Q92KL8_110-245_PF03734.4 101 1e-20 ErfK_YbiS_YhnG_Q89WV4_37-169_PF03734.4 101 1e-20 gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 101 2e-20 ErfK_YbiS_YhnG_Q5PG17_96-233_PF03734.4 100 2e-20 ErfK_YbiS_YhnG_Q92R37_35-174_PF03734.4 100 2e-20 gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 100 2e-20 gi|56413653|ref|YP_150728.1| putative LysM domain [Salmonella en... 100 2e-20 gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Baci... 100 2e-20 gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thio... 100 3e-20 ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 100 3e-20 ErfK_YbiS_YhnG_Q6N9D2_60-191_PF03734.4 100 3e-20 ErfK_YbiS_YhnG_Q987T4_107-242_PF03734.4 100 3e-20 gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein ... 100 3e-20 gi|67928661|ref|ZP_00521848.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 100 3e-20 gi|26989044|ref|NP_744469.1| hypothetical protein PP2320 [Pseudo... 99 4e-20 gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacil... 99 4e-20 gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:Er... 99 5e-20 ErfK_YbiS_YhnG_Q5WC42_54-163_PF03734.4 99 5e-20 ErfK_YbiS_YhnG_Q8Z7I2_99-240_PF03734.4 99 5e-20 ErfK_YbiS_YhnG_Q8CVY2_94-231_PF03734.4 99 6e-20 gi|48730422|ref|ZP_00264169.1| COG1376: Uncharacterized protein ... 99 7e-20 ErfK_YbiS_YhnG_Q8D0M4_96-235_PF03734.4 99 8e-20 gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein ... 98 1e-19 gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [B... 98 1e-19 gi|50085556|ref|YP_047066.1| conserved hypothetical protein; put... 98 1e-19 gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Baci... 98 2e-19 gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Syn... 98 2e-19 ErfK_YbiS_YhnG_Q8EAY9_93-230_PF03734.4 97 2e-19 gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted p... 97 2e-19 gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Baci... 97 2e-19 gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Azoar... 97 2e-19 gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acin... 97 3e-19 ErfK_YbiS_YhnG_Q6ND97_41-173_PF03734.4 97 3e-19 ErfK_YbiS_YhnG_Q5ZV45_94-231_PF03734.4 96 3e-19 gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Brady... 96 4e-19 ErfK_YbiS_YhnG_Q5P0G8_3-160_PF03734.4 96 4e-19 ErfK_YbiS_YhnG_Q87G47_99-238_PF03734.4 96 4e-19 ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 96 4e-19 gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Cl... 96 4e-19 gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera... 96 4e-19 gi|71363427|ref|ZP_00654071.1| ErfK/YbiS/YcfS/YnhG [Psychrobacte... 96 4e-19 gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Aci... 96 5e-19 ErfK_YbiS_YhnG_Q57D03_90-229_PF03734.4 96 5e-19 ErfK_YbiS_YhnG_Q60AJ8_93-237_PF03734.4 96 5e-19 gi|69930773|ref|ZP_00627470.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 96 5e-19 gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methy... 96 7e-19 gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psych... 96 7e-19 gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Brady... 95 7e-19 gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Ba... 95 8e-19 gi|1742774|dbj|BAA15464.1| Probable carnitine operon oxidoreduct... 95 9e-19 ErfK_YbiS_YhnG_Q883T0_95-232_PF03734.4 95 1e-18 gi|15025432|gb|AAK80371.1| Uncharacterized protein, ErfK family;... 95 1e-18 ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 94 1e-18 ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 94 1e-18 ErfK_YbiS_YhnG_Q73D94_22-142_PF03734.4 94 2e-18 ErfK_YbiS_YhnG_Q8Z5P0_93-230_PF03734.4 94 2e-18 gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 94 2e-18 ErfK_YbiS_YhnG_Q9HZZ0_93-230_PF03734.4 94 2e-18 gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120] 93 3e-18 gi|75675776|ref|YP_318197.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 93 3e-18 gi|15073891|emb|CAC45532.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 93 4e-18 ErfK_YbiS_YhnG_Q7MFG2_93-232_PF03734.4 93 5e-18 ErfK_YbiS_YhnG_Q97GF1_43-153_PF03734.4 93 6e-18 ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 92 6e-18 gi|71548935|ref|ZP_00669159.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 92 6e-18 ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 92 7e-18 gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitros... 92 8e-18 gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family ... 92 8e-18 ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 92 9e-18 ErfK_YbiS_YhnG_Q5N3Q0_79-206_PF03734.4 91 1e-17 ErfK_YbiS_YhnG_Q895S8_170-298_PF03734.4 91 1e-17 ErfK_YbiS_YhnG_Q8D2K2_98-234_PF03734.4 91 1e-17 gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermo... 91 1e-17 ErfK_YbiS_YhnG_Q55604_71-200_PF03734.4 91 1e-17 gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobac... 91 1e-17 gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subt... 91 2e-17 gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 91 2e-17 gi|39936101|ref|NP_948377.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 91 2e-17 ErfK_YbiS_YhnG_Q818U5_25-151_PF03734.4 91 2e-17 ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 90 2e-17 gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. ... 90 2e-17 gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobac... 90 2e-17 gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synec... 90 2e-17 ErfK_YbiS_YhnG_Q8YS14_144-270_PF03734.4 90 3e-17 gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Ba... 90 3e-17 DUF949_Q83CG1_72-171_PF06104.2 90 3e-17 gi|68270035|ref|ZP_00576285.1| Peptidoglycan-binding domain 1:Er... 90 4e-17 ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 89 5e-17 gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesor... 89 5e-17 ErfK_YbiS_YhnG_Q606Y7_79-237_PF03734.4 89 5e-17 gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 89 6e-17 ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 89 7e-17 gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 89 8e-17 gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein ... 88 1e-16 ErfK_YbiS_YhnG_Q5KXE9_24-150_PF03734.4 88 1e-16 gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Brady... 88 2e-16 gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbi... 88 2e-16 ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 87 2e-16 ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 87 3e-16 gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methy... 87 3e-16 gi|23127349|ref|ZP_00109222.1| COG1376: Uncharacterized protein ... 86 4e-16 gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] 86 4e-16 gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesor... 86 4e-16 ErfK_YbiS_YhnG_Q89CV1_74-185_PF03734.4 86 4e-16 gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legio... 86 4e-16 gi|68234377|ref|ZP_00573460.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 86 5e-16 gi|17936017|ref|NP_532807.1| hypothetical protein Atu2133 [Agrob... 86 5e-16 ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 86 6e-16 gi|68174074|ref|ZP_00547345.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 86 7e-16 gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [T... 85 8e-16 gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromo... 85 9e-16 gi|15074222|emb|CAC45869.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 85 1e-15 gi|17133905|dbj|BAB76467.1| all4768 [Nostoc sp. PCC 7120] 85 1e-15 gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinor... 85 1e-15 gi|71364962|ref|ZP_00655525.1| Peptidoglycan-binding domain 1:Er... 84 2e-15 gi|68189539|gb|EAN04205.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 84 2e-15 gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protei... 84 2e-15 gi|67938515|ref|ZP_00531039.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 84 2e-15 gi|58580802|ref|YP_199818.1| hypothetical protein XOO1179 [Xanth... 84 2e-15 gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein ... 84 2e-15 gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Woli... 84 2e-15 gi|15156344|gb|AAK87086.1| AGR_C_2380p [Agrobacterium tumefacien... 84 2e-15 gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanth... 84 2e-15 ErfK_YbiS_YhnG_Q9KCV4_26-152_PF03734.4 84 2e-15 gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquife... 84 2e-15 gi|71364613|ref|ZP_00655198.1| ErfK/YbiS/YcfS/YnhG [Psychrobacte... 84 3e-15 gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protei... 84 3e-15 ErfK_YbiS_YhnG_Q98PA3_31-163_PF03734.4 83 3e-15 gi|7380643|emb|CAB85233.1| hypothetical protein [Neisseria menin... 83 3e-15 gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Ba... 83 3e-15 ErfK_YbiS_YhnG_Q67P27_207-347_PF03734.4 83 6e-15 ErfK_YbiS_YhnG_Q98G98_358-493_PF03734.4 82 7e-15 gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protei... 82 7e-15 gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanth... 81 1e-14 ErfK_YbiS_YhnG_Q8YN05_54-169_PF03734.4 81 1e-14 ErfK_YbiS_YhnG_Q8UDJ2_335-470_PF03734.4 81 1e-14 gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clos... 81 2e-14 gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Baci... 81 2e-14 ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 81 2e-14 gi|67934041|ref|ZP_00527134.1| Peptidoglycan-binding domain 1:Er... 81 2e-14 gi|29654387|ref|NP_820079.1| hypothetical protein CBU1080 [Coxie... 80 3e-14 ErfK_YbiS_YhnG_Q89M18_213-348_PF03734.4 80 3e-14 ErfK_YbiS_YhnG_Q83CN1_2-158_PF03734.4 80 3e-14 ErfK_YbiS_YhnG_Q8PH92_78-212_PF03734.4 80 3e-14 gi|15075231|emb|CAC46787.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 80 3e-14 gi|15025657|gb|AAK80578.1| Uncharacterized protein, ErfK family ... 80 3e-14 ErfK_YbiS_YhnG_Q81XG3_27-152_PF03734.4 80 4e-14 ErfK_YbiS_YhnG_Q8P5X3_187-321_PF03734.4 80 4e-14 ErfK_YbiS_YhnG_Q5ZV58_5-145_PF03734.4 79 4e-14 ErfK_YbiS_YhnG_Q92K34_317-452_PF03734.4 79 4e-14 gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesor... 79 5e-14 gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Proc... 79 5e-14 ErfK_YbiS_YhnG_Q9JT27_44-178_PF03734.4 79 6e-14 gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [B... 79 7e-14 gi|68205981|ref|ZP_00558177.1| ErfK/YbiS/YcfS/YnhG [Desulfitobac... 79 7e-14 gi|67154504|ref|ZP_00416249.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 79 8e-14 ErfK_YbiS_YhnG_Q6N5E1_100-211_PF03734.4 78 9e-14 gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/Y... 78 1e-13 ErfK_YbiS_YhnG_Q89MP2_90-201_PF03734.4 78 1e-13 ErfK_YbiS_YhnG_Q8FYK9_271-406_PF03734.4 78 1e-13 gi|67918178|ref|ZP_00511779.1| ErfK/YbiS/YcfS/YnhG [Chlorobium l... 78 2e-13 gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacil... 78 2e-13 ErfK_YbiS_YhnG_Q8UFV4_31-142_PF03734.4 78 2e-13 ErfK_YbiS_YhnG_Q92US7_190-325_PF03734.4 78 2e-13 gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] 77 2e-13 ErfK_YbiS_YhnG_Q8XPD9_262-385_PF03734.4 77 3e-13 gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_20... 77 3e-13 gi|69937030|ref|ZP_00631751.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 77 3e-13 gi|61101279|ref|ZP_00376735.1| hypothetical protein ELI1976 [Ery... 77 3e-13 gi|34497388|ref|NP_901603.1| hypothetical protein CV1933 [Chromo... 76 4e-13 gi|48848818|ref|ZP_00303063.1| COG1376: Uncharacterized protein ... 76 5e-13 gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Proc... 76 5e-13 gi|61101139|ref|ZP_00376596.1| hypothetical protein ELI1837 [Ery... 76 5e-13 gi|22959005|ref|ZP_00006665.1| COG1376: Uncharacterized protein ... 76 6e-13 ErfK_YbiS_YhnG_Q9I5J7_55-167_PF03734.4 76 6e-13 gi|69930975|ref|ZP_00627615.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 75 1e-12 ErfK_YbiS_YhnG_Q7V8E9_47-190_PF03734.4 74 2e-12 gi|68174957|ref|ZP_00548215.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 74 2e-12 ErfK_YbiS_YhnG_Q98P76_240-375_PF03734.4 73 3e-12 gi|67676061|ref|ZP_00472813.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 73 4e-12 ErfK_YbiS_YhnG_Q92KF1_25-137_PF03734.4 73 4e-12 ErfK_YbiS_YhnG_Q5WH69_27-153_PF03734.4 72 7e-12 ErfK_YbiS_YhnG_Q7V696_87-217_PF03734.4 72 8e-12 gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacteriu... 71 1e-11 gi|71837791|ref|ZP_00677554.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 71 2e-11 ErfK_YbiS_YhnG_Q7NWP8_32-170_PF03734.4 71 2e-11 gi|68232378|ref|ZP_00571527.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 70 3e-11 gi|46400440|emb|CAF23889.1| hypothetical protein [Parachlamydia ... 70 4e-11 gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legio... 70 4e-11 gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legio... 69 5e-11 ErfK_YbiS_YhnG_Q6MC10_156-311_PF03734.4 67 3e-10 ErfK_YbiS_YhnG_Q8FMX7_240-368_PF03734.4 65 1e-09 gi|52857863|ref|ZP_00341701.1| COG1686: D-alanyl-D-alanine carbo... 63 4e-09 gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helic... 60 4e-08 gi|22294409|dbj|BAC08239.1| tsr0688 [Thermosynechococcus elongat... 56 5e-07 ErfK_YbiS_YhnG_Q8DL11_2-82_PF03734.4 56 7e-07 gi|10173425|dbj|BAB04530.1| BH0811 [Bacillus halodurans C-125] 53 4e-06 ErfK_YbiS_YhnG_Q9KEP1_54-138_PF03734.4 52 1e-05 Sequences not found previously or not previously below threshold: gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 109 5e-23 gi|68192907|gb|EAN07560.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 105 9e-22 gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 104 2e-21 gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Pho... 103 2e-21 gi|15155625|gb|AAK86477.1| AGR_C_1197p [Agrobacterium tumefacien... 103 3e-21 gi|69929997|ref|ZP_00626874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 102 4e-21 gi|49239475|emb|CAF25827.1| hypothetical protein [Bartonella qui... 102 5e-21 gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobiu... 102 6e-21 gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Erwi... 102 6e-21 gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Brady... 102 6e-21 ErfK_YbiS_YhnG_Q8UHL1_122-257_PF03734.4 101 1e-20 ErfK_YbiS_YhnG_Q6N3X7_92-223_PF03734.4 101 1e-20 gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 100 2e-20 gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photo... 100 3e-20 ErfK_YbiS_YhnG_Q89FR3_116-247_PF03734.4 99 4e-20 ErfK_YbiS_YhnG_Q6D900_96-233_PF03734.4 99 6e-20 gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Barto... 99 6e-20 gi|68190685|gb|EAN05343.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 99 7e-20 gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 98 1e-19 gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 98 1e-19 ErfK_YbiS_YhnG_Q8UCZ2_64-202_PF03734.4 98 1e-19 gi|13471882|ref|NP_103449.1| probable carnitine operon oxidoredu... 98 1e-19 ErfK_YbiS_YhnG_Q89VM1_60-191_PF03734.4 98 1e-19 gi|9392598|gb|AAF87210.1| unknown [Rhizobium leguminosarum bv. v... 98 2e-19 gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Brady... 97 3e-19 gi|68190182|gb|EAN04842.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 97 3e-19 ErfK_YbiS_YhnG_Q6N0G6_60-191_PF03734.4 96 3e-19 ErfK_YbiS_YhnG_Q6N230_94-225_PF03734.4 96 4e-19 gi|13474433|ref|NP_106001.1| hypothetical protein mlr5313 [Mesor... 96 4e-19 gi|46192901|ref|ZP_00005863.2| COG1376: Uncharacterized protein ... 96 5e-19 gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Brady... 96 6e-19 ErfK_YbiS_YhnG_Q6D623_94-234_PF03734.4 96 7e-19 ErfK_YbiS_YhnG_Q89UE9_98-229_PF03734.4 95 1e-18 ErfK_YbiS_YhnG_Q89E58_121-252_PF03734.4 94 1e-18 ErfK_YbiS_YhnG_Q8KR47_93-230_PF03734.4 94 2e-18 ErfK_YbiS_YhnG_Q6G2L0_77-216_PF03734.4 94 2e-18 gi|62289117|ref|YP_220910.1| lipoprotein, hypothetical [Brucella... 94 2e-18 gi|15075086|emb|CAC46643.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [... 94 2e-18 gi|15072991|emb|CAC41450.1| CONSERVED HYPOTHETICAL PROTEIN [Sino... 93 3e-18 gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesor... 93 3e-18 gi|22958594|ref|ZP_00006262.1| COG1376: Uncharacterized protein ... 93 5e-18 gi|15155831|gb|AAK86651.1| AGR_C_1541p [Agrobacterium tumefacien... 93 5e-18 gi|15073710|emb|CAC45352.1| PUTATIVE SIGNAL PEPTIDE PROTEIN [Sin... 93 6e-18 gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 92 6e-18 ErfK_YbiS_YhnG_Q9KIP0_82-225_PF03734.4 92 7e-18 gi|15155832|gb|AAK86652.1| AGR_C_1542p [Agrobacterium tumefacien... 92 8e-18 ErfK_YbiS_YhnG_Q92K56_83-221_PF03734.4 92 8e-18 gi|68189621|gb|EAN04286.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 92 9e-18 ErfK_YbiS_YhnG_Q6N1G4_67-202_PF03734.4 91 1e-17 gi|71837344|ref|ZP_00677109.1| Peptidoglycan-binding LysM:ErfK/Y... 91 1e-17 ErfK_YbiS_YhnG_Q92KL9_66-205_PF03734.4 91 1e-17 gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 91 2e-17 gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesor... 91 2e-17 ErfK_YbiS_YhnG_Q98JD1_93-231_PF03734.4 91 2e-17 ErfK_YbiS_YhnG_Q98C34_66-204_PF03734.4 91 2e-17 ErfK_YbiS_YhnG_Q6N3T2_113-244_PF03734.4 90 2e-17 ErfK_YbiS_YhnG_Q7N3U7_93-232_PF03734.4 90 3e-17 gi|29654868|ref|NP_820560.1| LysM domain protein [Coxiella burne... 90 3e-17 gi|53802376|ref|YP_112943.1| LysM domain protein [Methylococcus ... 90 3e-17 ErfK_YbiS_YhnG_Q92KJ2_100-241_PF03734.4 90 4e-17 ErfK_YbiS_YhnG_Q8UH41_160-301_PF03734.4 89 4e-17 ErfK_YbiS_YhnG_Q8G317_66-204_PF03734.4 89 4e-17 gi|66856700|ref|ZP_00400762.1| Peptidoglycan-binding LysM:ErfK/Y... 89 5e-17 gi|69926541|ref|ZP_00624012.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 89 7e-17 gi|46192110|ref|ZP_00007275.2| COG1376: Uncharacterized protein ... 89 7e-17 gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesor... 88 1e-16 ErfK_YbiS_YhnG_Q92TA3_134-276_PF03734.4 88 1e-16 gi|39936673|ref|NP_948949.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 88 1e-16 ErfK_YbiS_YhnG_Q88KH0_95-232_PF03734.4 88 1e-16 ErfK_YbiS_YhnG_Q9KNA7_90-229_PF03734.4 88 1e-16 ErfK_YbiS_YhnG_Q6LJB5_89-230_PF03734.4 88 1e-16 gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 88 2e-16 ErfK_YbiS_YhnG_Q985K6_93-234_PF03734.4 87 2e-16 gi|17933973|ref|NP_530763.1| hypothetical protein Atu0048 [Agrob... 87 2e-16 gi|68247205|gb|EAN29293.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 87 3e-16 ErfK_YbiS_YhnG_Q8UH40_114-255_PF03734.4 86 4e-16 gi|23346823|gb|AAN29007.1| lipoprotein, putative [Brucella suis ... 86 5e-16 ErfK_YbiS_YhnG_Q98KE1_92-230_PF03734.4 86 5e-16 gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Brady... 86 7e-16 ErfK_YbiS_YhnG_Q8UJ84_117-259_PF03734.4 86 7e-16 ErfK_YbiS_YhnG_Q989D5_60-195_PF03734.4 85 9e-16 gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulf... 85 9e-16 gi|23006269|ref|ZP_00048665.1| COG1376: Uncharacterized protein ... 85 1e-15 gi|15141233|emb|CAC49746.1| conserved hypothetical protein [Sino... 85 1e-15 gi|68190217|gb|EAN04877.1| Twin-arginine translocation pathway s... 84 2e-15 ErfK_YbiS_YhnG_Q57FW6_102-240_PF03734.4 84 2e-15 gi|16119419|ref|NP_396125.1| hypothetical protein AGR_pAT_272 [A... 84 2e-15 ErfK_YbiS_YhnG_Q8UAP2_82-223_PF03734.4 83 4e-15 gi|13474192|ref|NP_105760.1| hypothetical protein mll5027 [Mesor... 83 5e-15 gi|69933021|ref|ZP_00628223.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 83 6e-15 ErfK_YbiS_YhnG_Q8X604_93-232_PF03734.4 82 6e-15 gi|17937039|ref|NP_533828.1| hypothetical protein Atu3331 [Agrob... 82 6e-15 ErfK_YbiS_YhnG_Q98CS5_116-254_PF03734.4 82 7e-15 gi|68003733|ref|ZP_00536279.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 82 9e-15 ErfK_YbiS_YhnG_Q8UKC7_90-231_PF03734.4 82 1e-14 gi|23347356|gb|AAN29495.1| conserved hypothetical protein [Bruce... 82 1e-14 ErfK_YbiS_YhnG_Q92TZ7_91-232_PF03734.4 81 1e-14 ErfK_YbiS_YhnG_Q57EH0_96-237_PF03734.4 81 2e-14 gi|68190214|gb|EAN04874.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 81 2e-14 gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Brady... 81 2e-14 gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Brady... 79 4e-14 gi|69935211|ref|ZP_00630191.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 79 4e-14 gi|69927652|ref|ZP_00624813.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 79 5e-14 ErfK_YbiS_YhnG_Q89MH4_65-200_PF03734.4 79 5e-14 gi|23006804|ref|ZP_00048959.1| COG1376: Uncharacterized protein ... 79 5e-14 gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Ta... 79 7e-14 ErfK_YbiS_YhnG_Q83BD4_91-228_PF03734.4 78 2e-13 gi|68180217|ref|ZP_00553200.1| Twin-arginine translocation pathw... 77 2e-13 ErfK_YbiS_YhnG_Q89RZ1_67-201_PF03734.4 77 3e-13 gi|76165915|gb|EAO60044.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aur... 76 6e-13 ErfK_YbiS_YhnG_Q97FU5_105-228_PF03734.4 75 1e-12 ErfK_YbiS_YhnG_Q60BQ3_102-241_PF03734.4 75 1e-12 gi|56676740|gb|AAV93406.1| ErfK/YbiS/YcfS/YnhG family protein/Ta... 75 1e-12 gi|62317131|ref|YP_222984.1| hypothetical protein BruAb2_0179 [B... 74 1e-12 ErfK_YbiS_YhnG_Q5LWA4_42-184_PF03734.4 74 2e-12 ErfK_YbiS_YhnG_Q5LWL8_74-207_PF03734.4 74 2e-12 gi|69299488|ref|ZP_00621475.1| Twin-arginine translocation pathw... 73 4e-12 ErfK_YbiS_YhnG_Q74GR2_117-256_PF03734.4 73 6e-12 gi|69937362|ref|ZP_00632028.1| Twin-arginine translocation pathw... 73 6e-12 gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus] 71 1e-11 gi|53688090|ref|ZP_00109223.2| COG1376: Uncharacterized protein ... 71 2e-11 gi|46192269|ref|ZP_00007047.2| COG1376: Uncharacterized protein ... 71 2e-11 ErfK_YbiS_YhnG_Q8PB12_56-167_PF03734.4 70 3e-11 gi|68552645|ref|ZP_00592032.1| ErfK/YbiS/YcfS/YnhG [Prosthecochl... 70 3e-11 gi|75908663|ref|YP_322959.1| ErfK/YbiS/YcfS/YnhG [Anabaena varia... 70 3e-11 gi|71676969|ref|ZP_00674708.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 70 3e-11 ErfK_YbiS_YhnG_Q5LRC4_82-215_PF03734.4 70 3e-11 gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [S... 70 3e-11 gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodo... 70 4e-11 gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clos... 69 6e-11 gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanth... 69 8e-11 gi|17133907|dbj|BAB76469.1| all4770 [Nostoc sp. PCC 7120] 68 1e-10 ErfK_YbiS_YhnG_YAT5_56-188_PF03734.4 68 1e-10 gi|69297918|ref|ZP_00620214.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 68 1e-10 gi|67934945|ref|ZP_00527970.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 68 2e-10 gi|46191772|ref|ZP_00008016.2| COG1376: Uncharacterized protein ... 68 2e-10 gi|69929707|ref|ZP_00626584.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 68 2e-10 ErfK_YbiS_YhnG_Q899Q5_388-509_PF03734.4 68 2e-10 gi|76164940|gb|EAO59080.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aur... 66 5e-10 ErfK_YbiS_YhnG_Q6N3B5_55-166_PF03734.4 66 5e-10 gi|69937273|ref|ZP_00631965.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 66 6e-10 gi|16331947|ref|NP_442675.1| hypothetical protein sll0670 [Synec... 66 8e-10 gi|27377359|ref|NP_768888.1| hypothetical protein blr2248 [Brady... 65 1e-09 ErfK_YbiS_YhnG_Q89T02_56-167_PF03734.4 64 1e-09 gi|71838162|ref|ZP_00677923.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 64 2e-09 ErfK_YbiS_YhnG_Q8YN03_53-168_PF03734.4 64 2e-09 ErfK_YbiS_YhnG_Q55969_52-167_PF03734.4 64 3e-09 gi|29654687|ref|NP_820379.1| ErfK/YbiS/YcfS/YnhG family protein ... 62 8e-09 gi|23464689|ref|NP_695292.1| protein similar to YcbI of B. subti... 61 1e-08 gi|46190626|ref|ZP_00206527.1| COG1376: Uncharacterized protein ... 61 1e-08 gi|67929395|ref|ZP_00522577.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 61 2e-08 gi|41326655|emb|CAF21137.1| secreted lipoprotein ErfK/YbiS/YcfS/... 61 2e-08 gi|68195822|gb|EAN10258.1| ErfK/YbiS/YcfS/YnhG [Enterococcus fae... 61 2e-08 gi|27383268|ref|NP_774797.1| hypothetical protein bll8157 [Brady... 61 2e-08 gi|28377421|ref|NP_784313.1| hypothetical protein lp_0536 [Lacto... 61 2e-08 gi|23465720|ref|NP_696323.1| hypothetical protein BL1154 [Bifido... 61 2e-08 gi|48849271|ref|ZP_00303515.1| COG1376: Uncharacterized protein ... 60 3e-08 ErfK_YbiS_YhnG_Q8G821_57-179_PF03734.4 60 4e-08 gi|33632702|emb|CAE07514.1| conserved hypothetical protein [Syne... 59 5e-08 ErfK_YbiS_YhnG_Q83BU9_47-172_PF03734.4 59 5e-08 gi|28379499|ref|NP_786391.1| cell surface protein, ErfK family [... 59 6e-08 ErfK_YbiS_YhnG_Q89BJ1_28-145_PF03734.4 59 9e-08 gi|68263184|emb|CAI36672.1| putative lipoprotein [Corynebacteriu... 58 1e-07 gi|69929507|ref|ZP_00626384.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 58 1e-07 ErfK_YbiS_YhnG_Q7U7I3_35-179_PF03734.4 58 1e-07 gi|62514272|ref|ZP_00385780.1| COG1376: Uncharacterized protein ... 58 1e-07 gi|54297296|ref|YP_123665.1| hypothetical protein lpp1341 [Legio... 58 1e-07 gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Noca... 58 2e-07 ErfK_YbiS_YhnG_Q5YU65_123-251_PF03734.4 58 2e-07 gi|68002719|ref|ZP_00535287.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 57 2e-07 ErfK_YbiS_YhnG_Q88T96_80-208_PF03734.4 57 2e-07 gi|48870290|ref|ZP_00323015.1| COG1376: Uncharacterized protein ... 57 3e-07 gi|48871054|ref|ZP_00323771.1| COG5295: Autotransporter adhesin ... 56 4e-07 gi|38234386|ref|NP_940153.1| Putative lipoprotein [Corynebacteri... 56 4e-07 gi|28379551|ref|NP_786443.1| cell surface protein, ErfK family [... 56 4e-07 ErfK_YbiS_YhnG_Q5WX10_101-234_PF03734.4 56 4e-07 gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein ... 56 4e-07 gi|54294224|ref|YP_126639.1| hypothetical protein lpl1289 [Legio... 56 5e-07 gi|31790351|gb|AAP58608.1| hypothetical protein [uncultured Acid... 56 6e-07 gi|58337862|ref|YP_194447.1| putative cell surface protein [Lact... 56 6e-07 gi|53804847|ref|YP_113494.1| ErfK/YbiS/YcfS/YnhG family protein ... 56 6e-07 ErfK_YbiS_YhnG_Q5FIQ8_97-226_PF03734.4 56 7e-07 ErfK_YbiS_YhnG_Q88Z40_337-463_PF03734.4 56 7e-07 gi|15828436|ref|NP_302699.1| possible secreted protein [Mycobact... 56 7e-07 ErfK_YbiS_YhnG_Q8NMT9_240-368_PF03734.4 56 8e-07 gi|61102228|ref|ZP_00377682.1| hypothetical protein ELI2923 [Ery... 56 8e-07 ErfK_YbiS_YhnG_Q8G566_403-530_PF03734.4 55 8e-07 gi|38233153|ref|NP_938920.1| Putative secreted protein [Coryneba... 55 8e-07 gi|4539222|emb|CAB39880.1| putative secreted protein [Streptomyc... 55 9e-07 gi|48870588|ref|ZP_00323309.1| COG1376: Uncharacterized protein ... 55 1e-06 gi|67987357|gb|EAM75155.1| ErfK/YbiS/YcfS/YnhG [Kineococcus radi... 55 1e-06 gi|29654445|ref|NP_820137.1| enhanced entry protein EnhA, putati... 55 1e-06 gi|68191412|gb|EAN06068.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 55 1e-06 ErfK_YbiS_YhnG_Q9ZBE6_121-249_PF03734.4 55 1e-06 gi|16077404|ref|NP_388217.1| hypothetical protein BSU03350 [Baci... 54 1e-06 ErfK_YbiS_YhnG_Q6N429_21-139_PF03734.4 54 1e-06 ErfK_YbiS_YhnG_Q5ZVQ4_29-154_PF03734.4 54 2e-06 ErfK_YbiS_YhnG_Q9X811_245-373_PF03734.4 54 2e-06 gi|40217343|emb|CAE09094.1| putative lipoprotein Lpps [Gordonia ... 54 2e-06 gi|71544473|ref|ZP_00665504.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 54 2e-06 gi|71546012|ref|ZP_00666894.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 54 2e-06 gi|52857829|ref|ZP_00341684.1| COG1376: Uncharacterized protein ... 54 2e-06 ErfK_YbiS_YhnG_Q88T44_91-218_PF03734.4 54 3e-06 gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Noca... 54 3e-06 gi|15023630|gb|AAK78723.1| Secreted protein containing uncharact... 54 3e-06 gi|28378135|ref|NP_785027.1| cell surface protein, ErfK family [... 54 3e-06 ErfK_YbiS_YhnG_Q97I32_158-280_PF03734.4 54 3e-06 gi|15024797|gb|AAK79787.1| Fusion of predicted Zn-dependent amid... 54 3e-06 gi|69926713|ref|ZP_00624184.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 53 3e-06 gi|37520540|ref|NP_923917.1| hypothetical protein glr0971 [Gloeo... 53 3e-06 gi|62514270|ref|ZP_00385778.1| COG1376: Uncharacterized protein ... 53 4e-06 gi|39983561|gb|AAR34954.1| ErfK/YbiS/YcfS/YnhG family protein [G... 53 5e-06 ErfK_YbiS_YhnG_Q74CU1_138-290_PF03734.4 53 6e-06 ErfK_YbiS_YhnG_Q6NFS1_231-358_PF03734.4 52 7e-06 gi|68160971|gb|AAY86917.1| lr1830 [Lactobacillus reuteri] 52 7e-06 gi|42524408|ref|NP_969788.1| hypothetical protein Bd3012 [Bdello... 52 8e-06 ErfK_YbiS_YhnG_P94399_65-193_PF03734.4 52 8e-06 ErfK_YbiS_YhnG_Q6NJ68_158-268_PF03734.4 52 9e-06 ErfK_YbiS_YhnG_Q88X41_76-202_PF03734.4 52 9e-06 gi|54298630|ref|YP_124999.1| enhanced entry protein EnhA [Legion... 52 9e-06 ErfK_YbiS_YhnG_Q5YMV0_180-308_PF03734.4 52 9e-06 gi|13471264|ref|NP_102833.1| hypothetical protein mll1184 [Mesor... 52 9e-06 gi|23007283|ref|ZP_00049221.1| COG1376: Uncharacterized protein ... 52 1e-05 ErfK_YbiS_YhnG_O86068_2-104_PF03734.4 52 1e-05 ErfK_YbiS_YhnG_Q7X2V6_85-220_PF03734.4 52 1e-05 gi|68175646|ref|ZP_00548886.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 52 1e-05 gi|3462874|gb|AAC34464.1| unknown [Rhizobium etli] 52 1e-05 >gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor [Escherichia coli CFT073] Length = 246 Score = 258 bits (661), Expect = 5e-68 Identities = 161/201 (80%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ KMG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 30 PVSKEYKQQLMGSPVYIQIFKEERTLDLY-VKMGEQYQLLDSYKICKYSGGLGPKQRQGD 88 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 89 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 148 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 149 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 208 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 209 RKPPTVSVVNGRYVVSKPLSH 229 >gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110] Length = 526 Score = 256 bits (654), Expect = 3e-67 Identities = 109/203 (53%), Positives = 142/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKEL------KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PV +L K SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGP Sbjct: 46 PVPPKLLAAMVEKDMDLQSPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGP 105 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S G Sbjct: 106 KVREGDRQAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRG 165 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GY Sbjct: 166 CYAMTDEQIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGY 225 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V C +YVF Sbjct: 226 DHFEVTRQEPKVDFCEKKYVFDA 248 >gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica serovar Typhi Ty2] Length = 246 Score = 252 bits (645), Expect = 3e-66 Identities = 157/198 (79%), Positives = 170/198 (85%), Gaps = 1/198 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 KE KQQL GSPVYI+IFKEER L+L+ MG +YQL+ SY IC +SGGLGPKRR+GDF+S Sbjct: 33 KEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKS 91 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFYSVQ NQL PDSR+Y AINIGFPNAYDRAHGY GKYLMIHGACVSVGCYAMTD+ I Sbjct: 92 PEGFYSVQRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGI 151 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 DEIF FV A V GQPSVQVSIYPFRMTDANMQRH+ S DFW QLKPGYDYFEQT KP Sbjct: 152 DEIFQFVTAALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKP 211 Query: 184 PTVSVCNGRYVFSKPLSH 201 PTVS+ +GRYV SKPLSH Sbjct: 212 PTVSIVDGRYVVSKPLSH 229 >DUF949_Q83M88_30-229_PF06104.2 Length = 200 Score = 252 bits (645), Expect = 3e-66 Identities = 160/201 (79%), Positives = 174/201 (86%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ MG +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 1 PVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 60 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 120 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 179 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 180 RKPPTVSVANGRYVVSKPLSH 200 >gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizobium meliloti] Length = 480 Score = 252 bits (643), Expect = 5e-66 Identities = 117/189 (61%), Positives = 144/189 (76%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY Sbjct: 53 MQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFY 112 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFA 128 + PNQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA Sbjct: 113 PLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFA 172 Query: 129 FVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSV 188 RDAF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+V Sbjct: 173 LARDAFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNV 232 Query: 189 CNGRYVFSK 197 C +YVF++ Sbjct: 233 CERKYVFNQ 241 >DUF949_Q89XW3_52-252_PF06104.2 Length = 201 Score = 250 bits (638), Expect = 2e-65 Identities = 106/191 (55%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Q+PEG Sbjct: 7 KDMDLQSPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDRQAPEG 66 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD QI EI Sbjct: 67 FYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEI 126 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 ++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR+ P V Sbjct: 127 YSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKV 186 Query: 187 SVCNGRYVFSK 197 C +YVF Sbjct: 187 DFCEKKYVFDA 197 >DUF949_Q92JZ0_45-245_PF06104.2 Length = 201 Score = 249 bits (637), Expect = 3e-65 Identities = 117/189 (61%), Positives = 144/189 (76%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY Sbjct: 9 MQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFY 68 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFA 128 + PNQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA Sbjct: 69 PLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFA 128 Query: 129 FVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSV 188 RDAF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+V Sbjct: 129 LARDAFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNV 188 Query: 189 CNGRYVFSK 197 C +YVF++ Sbjct: 189 CERKYVFNQ 197 >gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 439 Score = 249 bits (636), Expect = 4e-65 Identities = 116/193 (60%), Positives = 147/193 (76%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K +P+ +R+FKEE LE+WK K G Y L+KSY ICKWSG LGPK EGD Q+P Sbjct: 53 KAKGMSTNAPIMMRVFKEEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAP 112 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+++P Q+NP+S Y+L+ NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q++ Sbjct: 113 EGFYTIRPQQMNPNSSYHLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVE 172 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ + Q +PFRMT NM R+RN PNY FW+ LK GYD+FE T+ PP Sbjct: 173 EIYAFARDAFRGGQEAFQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPP 232 Query: 185 TVSVCNGRYVFSK 197 V VC RYVF++ Sbjct: 233 KVDVCEARYVFNR 245 >gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009] Length = 491 Score = 247 bits (631), Expect = 1e-64 Identities = 112/203 (55%), Positives = 142/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKEL------KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PVS +L K SP+ +R+FK+E +LE+WK G +QL+KSYPIC+WSG LGP Sbjct: 54 PVSPKLVAAMQEKNMDLQSPILVRLFKQEAELEVWKQDRTGVFQLLKSYPICRWSGDLGP 113 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S G Sbjct: 114 KIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRG 173 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q+ YPF+MT N +HRN+PN FWK LK GY Sbjct: 174 CYAMTDEQIAEIYALGRESFFGGQRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGY 233 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V C +YVF Sbjct: 234 DHFEVTRQEPKVDFCEHKYVFDA 256 >gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 335 Score = 245 bits (625), Expect = 6e-64 Identities = 105/191 (54%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P +PV +RIFK+E +LE+WK G++ L+K+YP+C+WSG LGPK++ GD Q+PEG Sbjct: 47 KSMSPSAPVLVRIFKQESELEVWKRDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEG 106 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YYL+ N+G+PN + A GYTG+ LM+HGAC S GC+A+TD + EI Sbjct: 107 FYHVSARMLNPNSQYYLSFNLGYPNRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEI 166 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R+A GGQ S QV +PFRMT NM ++RN PN+ FW LK GYD FE TR+ P V Sbjct: 167 YAVAREALKGGQGSFQVQAFPFRMTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKV 226 Query: 187 SVCNGRYVFSK 197 S C GRYVF + Sbjct: 227 SYCEGRYVFDR 237 >gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255] Length = 492 Score = 244 bits (624), Expect = 8e-64 Identities = 107/192 (55%), Positives = 138/192 (71%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K SP+ IR+FK+E +LE+WK G++ L+KSYPIC+WSG LGPK REGD Q+PE Sbjct: 52 AKDMELQSPILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGPKTREGDRQAPE 111 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFYS+ P Q+NP S YYL+ N G+PN +D++ G TG LM+HG C S GCYAMTD QI E Sbjct: 112 GFYSITPAQMNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAE 171 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+A R++F GGQ + Q+ YPFRMT AN+ +HRN+PN FWK +K G D+FE TR+ P Sbjct: 172 IYAVGRESFFGGQRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPK 231 Query: 186 VSVCNGRYVFSK 197 V+ C +YVF Sbjct: 232 VAFCERKYVFDP 243 >gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefaciens str. C58] Length = 351 Score = 243 bits (621), Expect = 2e-63 Identities = 110/192 (57%), Positives = 135/192 (70%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+P Sbjct: 61 SAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAP 120 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ Sbjct: 121 EGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVG 180 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 181 EIYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQP 240 Query: 185 TVSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 241 KVSVCGRRYVFN 252 >gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melitensis 16M] Length = 403 Score = 242 bits (619), Expect = 3e-63 Identities = 123/204 (60%), Positives = 147/204 (72%), Gaps = 6/204 (2%) Query: 1 PVSKE------LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ ++ K SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGP Sbjct: 35 PLPQKIVAKMQAKGMPRTSPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGP 94 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K EGD Q+PEGFY+V+P Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S G Sbjct: 95 KYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSG 154 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+MTD Q+ EI+AF RDAF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GY Sbjct: 155 CYSMTDEQVAEIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGY 214 Query: 175 DYFEQTRKPPTVSVCNGRYVFSKP 198 D FE T+ PP V VC RYVF+ P Sbjct: 215 DAFETTKVPPKVDVCEKRYVFNVP 238 >gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Medievalis str. 91001] Length = 250 Score = 242 bits (618), Expect = 4e-63 Identities = 136/197 (69%), Positives = 163/197 (82%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 33 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFY + L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 92 KSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 151 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ N+QRHRNS +FW+QL+PGY YF + R Sbjct: 152 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNR 211 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 212 MPPPVSVSNGQYVLSPP 228 >gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 244 Score = 241 bits (616), Expect = 7e-63 Identities = 122/199 (61%), Positives = 152/199 (76%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ Y+L++ YPICK+SGGLGPKR EGD Sbjct: 32 PIAKELKQQLLGSPIYIQIFKEERIFELYAKVGNE-YRLLEQYPICKYSGGLGPKRVEGD 90 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 91 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 150 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 151 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 210 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 211 NQPPAITVFNGQYVVNPPL 229 >gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14] Length = 502 Score = 241 bits (616), Expect = 7e-63 Identities = 107/203 (52%), Positives = 138/203 (67%), Gaps = 6/203 (2%) Query: 1 PVSKEL------KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PV +L K SP+ IR+FK+E +LE+WK G++ L+K+YPIC+WSG LGP Sbjct: 56 PVPPKLVAAMTEKDMELQSPILIRLFKQEAELEVWKQNRSGKFALLKTYPICRWSGDLGP 115 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S G Sbjct: 116 KTREGDRQAPEGFYSISPAQMNPRSAYYLSFNTGYPNAFDKSLGRTGSELMVHGDCSSRG 175 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q YPF MT N+ +HRN+PN FWK +K G Sbjct: 176 CYAMTDEQIAEIYALGRESFFGGQHAFQFQAYPFHMTPVNLAKHRNNPNMPFWKMIKEGS 235 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE T + P V C +YVF Sbjct: 236 DHFEVTHQAPKVEFCEHKYVFDP 258 >gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099] Length = 395 Score = 240 bits (614), Expect = 1e-62 Identities = 120/180 (66%), Positives = 143/180 (79%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P+Q+NP Sbjct: 10 RIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNP 69 Query: 78 DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RDAF GG Sbjct: 70 RSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG 129 Query: 138 QPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVFSK 197 Q QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC RYVF++ Sbjct: 130 QTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKRYVFNQ 189 >DUF949_Q8YJP4_41-241_PF06104.2 Length = 201 Score = 239 bits (611), Expect = 3e-62 Identities = 122/194 (62%), Positives = 144/194 (74%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+P Sbjct: 5 QAKGMPRTSPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAP 64 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+V+P Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ Sbjct: 65 EGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVA 124 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP Sbjct: 125 EIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPP 184 Query: 185 TVSVCNGRYVFSKP 198 V VC RYVF+ P Sbjct: 185 KVDVCEKRYVFNVP 198 >DUF949_Q66E07_28-227_PF06104.2 Length = 200 Score = 239 bits (610), Expect = 3e-62 Identities = 138/197 (70%), Positives = 164/197 (83%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 2 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFYS+ L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 61 KSPEGFYSINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 120 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ NMQRHRNS +FW+QL+PGY YF + R Sbjct: 121 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNR 180 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 181 MPPPVSVSNGQYVLSPP 197 >gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] Length = 247 Score = 238 bits (609), Expect = 4e-62 Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + LI Y ICKWSG LGP Sbjct: 36 PLPREVQNRMVLYNVDPYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGDFQ+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S G Sbjct: 96 KYKEGDFQTPEGFYTISASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+M+D + +I+AF RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GY Sbjct: 156 CYSMSDKNMAQIYAFARDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D FE+ RKPPTV V RYVF+ Sbjct: 216 DLFEKNRKPPTVDVYEKRYVFN 237 >DUF949_Q98FX6_1-193_PF06104.2 Length = 193 Score = 238 bits (609), Expect = 5e-62 Identities = 120/180 (66%), Positives = 143/180 (79%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P+Q+NP Sbjct: 10 RIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNP 69 Query: 78 DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RDAF GG Sbjct: 70 RSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG 129 Query: 138 QPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVFSK 197 Q QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC RYVF++ Sbjct: 130 QTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKRYVFNQ 189 >gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 247 Score = 238 bits (608), Expect = 5e-62 Identities = 110/202 (54%), Positives = 142/202 (70%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGP Sbjct: 36 PLPQEVQNKMVLHNIDPYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGD Q+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVG Sbjct: 96 KYKEGDLQTPEGFYTISADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAM D + +I+AF RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GY Sbjct: 156 CYAMGDKNMAQIYAFARDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D+FE+ RKPPTV V RYVFS Sbjct: 216 DFFEENRKPPTVDVYKKRYVFS 237 >DUF949_Q7CS68_57-257_PF06104.2 Length = 201 Score = 238 bits (608), Expect = 5e-62 Identities = 110/192 (57%), Positives = 135/192 (70%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+P Sbjct: 5 SAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAP 64 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ Sbjct: 65 EGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVG 124 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 125 EIYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQP 184 Query: 185 TVSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 185 KVSVCGRRYVFN 196 >DUF949_Q6D1H5_32-231_PF06104.2 Length = 200 Score = 237 bits (605), Expect = 1e-61 Identities = 122/199 (61%), Positives = 152/199 (76%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ Y+L++ YPICK+SGGLGPKR EGD Sbjct: 1 PIAKELKQQLLGSPIYIQIFKEERIFELYAKVGNE-YRLLEQYPICKYSGGLGPKRVEGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 60 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 120 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 179 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 180 NQPPAITVFNGQYVVNPPL 198 >DUF949_Q7CSY6_66-266_PF06104.2 Length = 201 Score = 236 bits (603), Expect = 2e-61 Identities = 114/192 (59%), Positives = 139/192 (72%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PE Sbjct: 6 KKGMDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPE 65 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFY++ P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI E Sbjct: 66 GFYNLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILE 125 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+ F RDAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP Sbjct: 126 IYGFARDAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPD 185 Query: 186 VSVCNGRYVFSK 197 V+VC +YVF++ Sbjct: 186 VNVCEKKYVFNQ 197 >gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefaciens str. C58] Length = 452 Score = 235 bits (600), Expect = 5e-61 Identities = 114/192 (59%), Positives = 139/192 (72%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PE Sbjct: 71 KKGMDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPE 130 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFY++ P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI E Sbjct: 131 GFYNLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILE 190 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+ F RDAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP Sbjct: 191 IYGFARDAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPD 250 Query: 186 VSVCNGRYVFSK 197 V+VC +YVF++ Sbjct: 251 VNVCEKKYVFNQ 262 >gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella typhimurium LT2] Length = 239 Score = 234 bits (598), Expect = 1e-60 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 39 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 98 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 99 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 158 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 159 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 218 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 219 RRLPTITVENRRYKISP 235 >DUF949_Q6G1P2_42-242_PF06104.2 Length = 201 Score = 233 bits (594), Expect = 3e-60 Identities = 109/186 (58%), Positives = 136/186 (73%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + LI Y ICKWSG LGPK +EGDFQ+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S GCY+M+D + +I+AF Sbjct: 71 SASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GYD FE+ RKPPTV V Sbjct: 131 RDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYE 190 Query: 191 GRYVFS 196 RYVF+ Sbjct: 191 KRYVFN 196 >gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 238 Score = 232 bits (592), Expect = 4e-60 Identities = 102/195 (52%), Positives = 137/195 (70%), Gaps = 1/195 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 E + G+P++IRIFK+ LE+W G ++L K+Y IC SG LGPK R GD Q+ Sbjct: 45 SEKGLRY-GAPIFIRIFKQSATLEVWLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQA 103 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFY V + NP S+++L+ N+G+PNAYDRAHG TG LM+HG CVS+GCYAMTD+ I Sbjct: 104 PEGFYFVNAQRFNPWSKFHLSFNLGYPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGI 163 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 +EI+A + + GQP +V I+PFR++D ++R +N+ Y FW LK G+DYFEQT+ P Sbjct: 164 EEIYALAQKSLEDGQPFFRVHIFPFRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMP 223 Query: 184 PTVSVCNGRYVFSKP 198 P V+V N RYVFS P Sbjct: 224 PNVNVQNKRYVFSAP 238 >DUF949_Q57JI8_39-239_PF06104.2 Length = 201 Score = 232 bits (591), Expect = 6e-60 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 1 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 61 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 120 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 121 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 180 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 181 RRLPTITVENRRYKISP 197 >DUF949_Q6G1H8_42-242_PF06104.2 Length = 201 Score = 230 bits (587), Expect = 2e-59 Identities = 108/186 (58%), Positives = 134/186 (72%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGPK +EGD Q+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVGCYAM D + +I+AF Sbjct: 71 SADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GYD+FE+ RKPPTV V Sbjct: 131 RDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYK 190 Query: 191 GRYVFS 196 RYVFS Sbjct: 191 KRYVFS 196 >gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 229 bits (584), Expect = 4e-59 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 41 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 101 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 160 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 161 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 220 Query: 191 GRYVFSK 197 G+YV + Sbjct: 221 GQYVVNA 227 >DUF949_Q7N7F5_31-231_PF06104.2 Length = 201 Score = 225 bits (575), Expect = 4e-58 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 11 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 71 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 131 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 190 Query: 191 GRYVFSK 197 G+YV + Sbjct: 191 GQYVVNA 197 >gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 205 bits (521), Expect = 8e-52 Identities = 90/167 (53%), Positives = 121/167 (72%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIG 88 ++A+ G Y L+K+YPI +WS LGPK ++GD Q+PEGFY++ P Q+NP+S YYL+ ++G Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62 Query: 89 FPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 +PNA DRA G TG Y+M+HG C S GC+AMTDA + EI+A R+AF GGQ + Q YPF Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNGGQRAFQFQSYPF 122 Query: 149 RMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVF 195 RMT AN+ + RN PN FW+ LK G DYFE ++ P V+ C +YVF Sbjct: 123 RMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169 >gi|54297427|ref|YP_123796.1| Legionella secretion system protein A [Legionella pneumophila str. Paris] Length = 243 Score = 152 bits (385), Expect = 5e-36 Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 20/192 (10%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + P + + FK ERK+ELW E+ I YP+ +SG LGPK RE D Sbjct: 57 YFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDK 116 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGC 115 Q PEG Y + NP S +L++ I +PN++DR GY G + IHG +SVGC Sbjct: 117 QIPEGIYKLVN--FNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGC 174 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS----PNY--DFWKQ 169 A+ D ID++F R G ++QV I P D Q+ S P + + +KQ Sbjct: 175 LAVGDLAIDQLFILAR---RVGLKNIQVIIAP---NDLRYQKPSTSTFAQPRWLPELYKQ 228 Query: 170 LKPGYDYFEQTR 181 + F++T+ Sbjct: 229 ISESLKPFKKTK 240 >gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099] Length = 163 Score = 140 bits (354), Expect = 2e-32 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 26/148 (17%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 22 AEKVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML 76 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------V 111 NP+S + +I+I +PNA D A G +MIHG Sbjct: 77 DW--RNPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDW 134 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC A+TD+ +DEI+A V D Sbjct: 135 TDGCIAVTDSDMDEIWAMVADGTPIEIE 162 >gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudomonas putida KT2440] Length = 184 Score = 140 bits (353), Expect = 2e-32 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 33/165 (20%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 +Q + + + K ER+L+L + +K+Y I G K REGD Sbjct: 34 TPSPSQQAMQPLIDKVLVIKSERRLQLISR-----GEPLKTYRISLGKQPKGAKEREGDK 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC------ 110 ++PEG Y + + + R+ LA++I +PN D A G +MIHG Sbjct: 89 KTPEGLYWLDWRKQS--DRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYP 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E++ VRD + + I P Sbjct: 147 EWYFHTLDWTDGCIAMRNRDMQEVWDLVRDGTL-------IEIRP 184 >gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] Length = 167 Score = 139 bits (351), Expect = 4e-32 Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 33/159 (20%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 L G + + K ERKL L ++KSY + GPK EGD ++PEGFY Sbjct: 23 SLEGKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFY 77 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------- 110 + + + + Y L+++I +PNA D A G +MIHG Sbjct: 78 WIDWRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTL 135 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 + GC AM + + E+++ V+D + + I P Sbjct: 136 DWTNGCIAMNNTDMREVWSVVKDGTL-------IEIRPG 167 >ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 Length = 139 Score = 139 bits (350), Expect = 5e-32 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 1 EKVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYMLD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 NP+S + +I+I +PNA D A G +MIHG + Sbjct: 56 W--RNPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+TD+ +DEI+A V D Sbjct: 114 DGCIAVTDSDMDEIWAMVADGTPIEI 139 >gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 162 Score = 136 bits (342), Expect = 4e-31 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 27/152 (17%) Query: 9 QLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + G PV I + K RK+ L E +++ Y + +G K+ EGD ++PEG Sbjct: 18 RYNGPPVTSIVVNKGSRKMYLLN-----ESKVLTEYKVGLGFAPVGHKQVEGDGRTPEGT 72 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------ 110 Y + + NP S++YL++ I +PN+ DRAH G + IHG Sbjct: 73 YLID--RRNPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRRAARV 130 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+T+ +I+EI++ V + + + Sbjct: 131 RDWTAGCIAVTNDEIEEIWSMVNNGTLITLRA 162 >gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 172 Score = 135 bits (341), Expect = 5e-31 Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 37/167 (22%) Query: 4 KELKQQLPGS----PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 + PG I + K ERKL L Q +KSY + GPKRREG Sbjct: 20 SQASVLSPGEEQRIVDKILVVKSERKLMLLSR-----GQPLKSYKVSLGKRPTGPKRREG 74 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC---- 110 D ++PEG Y + + +Y L+++I +PN D+A G +M+HG Sbjct: 75 DQRTPEGLYWIDWRK--ASDKYNLSMHISYPNIRDQAQARAEGVPPGGMIMLHGTPLDEN 132 Query: 111 ----------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + I E+++ V+D + + I P Sbjct: 133 YPEWYFHGLDWTEGCIAMRNDDIREVWSLVKDGTL-------IEIRP 172 >gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 187 Score = 135 bits (341), Expect = 6e-31 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y I G K +EGD ++PEGFY + Sbjct: 48 PIDKVLVLKSARQLQLISG-----GEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDW 102 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +M+HG + Sbjct: 103 RK--PSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN 160 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+ + + EI+ V+D + + I P Sbjct: 161 GCIALKNNDMREIWDLVKDGTM-------IEIRP 187 >gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pseudomonas syringae pv. tomato str. DC3000] Length = 208 Score = 134 bits (337), Expect = 2e-30 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 69 KIDKVLVLKSARQLQLISG-----GEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 123 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 124 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 181 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+ + + EI+ V+D + + I P Sbjct: 182 GCIALKNNDMREIWDLVKDGTM-------IEIRP 208 >ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 Length = 139 Score = 133 bits (335), Expect = 3e-30 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + + K ERKL L ++KSY + GPK EGD ++PEGFY + Sbjct: 1 GKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 + + + Y L+++I +PNA D A G +MIHG + Sbjct: 56 WRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC AM + + E+++ V+D + Sbjct: 114 NGCIAMNNTDMREVWSVVKDGTLIEI 139 >gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii] Length = 299 Score = 133 bits (334), Expect = 3e-30 Identities = 37/205 (18%), Positives = 56/205 (27%), Gaps = 47/205 (22%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP + I + E +L + L PI G ++ Sbjct: 85 PQQLILPDTVREGIIVNAAEMRLYYYPPGSNTVEVL----PIGIGQAG---------RET 131 Query: 64 PEGFYS-VQPNQLNPDSRYYL---------------AINIGFPNAYDRAHGYTGKYLMIH 107 P + + V+ Q P + G N Y G+ IH Sbjct: 132 PRNWVTAVERKQEGPTWSPTPNTRRAYAAEGKTLPAFVPAGPDNPMGLYAIYIGRLYAIH 191 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC + + I +F V V ++T Sbjct: 192 GTNSNFGIGLRVSQGCIRLRNNDIKYLFDNVPVGTRVQLIDQPV-----KVTTE----PD 242 Query: 160 NSPNYDFWKQLKPGYDYFEQTRKPP 184 S + + L FE TRK P Sbjct: 243 GSRWVEVHEPLSRNRAEFESTRKVP 267 >gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 334 Score = 133 bits (334), Expect = 4e-30 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 26/146 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I I K +R+L L+ + +KSY I GPK REGD ++PEG Y + Sbjct: 195 AVTRILIEKGDRRLTLFSRN-----EALKSYRIALGGAPSGPKEREGDNKTPEGAYVIDS 249 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVSV 113 N +S+Y+L+++I +PN D+ G +MIHG A + Sbjct: 250 K--NGNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTR 307 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A++D +I+EI+ V+ Sbjct: 308 GCVAVSDEEIEEIYKLVQIGTAVEIR 333 >gi|75186790|ref|ZP_00700057.1| COG1376: Uncharacterized protein conserved in bacteria [Escherichia coli E24377A] Length = 311 Score = 132 bits (333), Expect = 4e-30 Identities = 36/205 (17%), Positives = 56/205 (27%), Gaps = 47/205 (22%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP + I + E +L + ++ +PI G ++ Sbjct: 86 PQQLILPATVRKGIVVNVAEMRLYYYPPDSNT----VEVFPIGIGQAG---------RET 132 Query: 64 PE-GFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAHGYTGKYLMIH 107 P +V+ Q P R Y P N Y G+ IH Sbjct: 133 PRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIH 192 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC + + I +F V V + T Sbjct: 193 GTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPV-----KYTTE----PD 243 Query: 160 NSPNYDFWKQLKPGYDYFEQTRKPP 184 S + + L +E RK P Sbjct: 244 GSNWLEVHEPLSRNRAEYESDRKVP 268 >ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 Length = 138 Score = 132 bits (333), Expect = 5e-30 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 1 KIDKVLVLKSARQLQLISG-----GEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 55 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 56 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 113 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+ + + EI+ V+D + Sbjct: 114 GCIALKNNDMREIWDLVKDGTMIEI 138 >DUF949_Q60B45_95-280_PF06104.2 Length = 186 Score = 132 bits (332), Expect = 6e-30 Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW +Y+LI+ Y I SG GPK R+GD Sbjct: 1 PYFERAGVAFPPREVVLVGLKQEKKLELWARDGS-DYRLIRHYDIQAASGSAGPKLRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D H G + IHG VS G Sbjct: 60 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 118 CLAMGDEAIEELFVLT---AQVGKENVKVVIAP 147 >gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 167 Score = 132 bits (332), Expect = 6e-30 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 33/159 (20%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 Q + + K E +L + + + +++KSY I G K +EGD ++P+G Sbjct: 23 SQTTAKVDLVVVNKSESRLSVMR-----DGRVVKSYLIAMGDVPSGHKLKEGDQRTPQGR 77 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG-------------- 108 Y + + DS +Y +I+I +PN D+ G +MIHG Sbjct: 78 YVLDYKKS--DSAFYKSIHISYPNEEDKLRADALGIRAGGMIMIHGENPRSTLPPEEAQK 135 Query: 109 ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+ ++DE++ + + I+P Sbjct: 136 YNWTNGCIAVTNKEMDELWQMIDAGT-------PIEIWP 167 >gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 202 Score = 131 bits (331), Expect = 7e-30 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 26/157 (16%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + ++ + I I K RK+ L + +++K Y + G K+ EGD + Sbjct: 53 DSKFRRYYGPAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGK 107 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC------- 110 +PEG Y + + NP+S ++L++ I +PN+ D A+ G + IHG Sbjct: 108 TPEGTYLID--RRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRK 165 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+ + +I+EI+A VRD V + Sbjct: 166 KAKKQPDWTAGCIAVKNDEIEEIYAMVRDGTVITLRA 202 >gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5] Length = 167 Score = 131 bits (331), Expect = 9e-30 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 34/160 (21%) Query: 8 QQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + L G + + + K +L+L + +K+Y I GPK EGD ++PEG Sbjct: 22 ETLDGKVIEKVLVLKSAHQLQLING-----GKPLKTYRISLGKKPKGPKLMEGDKRTPEG 76 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------- 110 Y + + + RY LA++I +PN D A G +MIHG Sbjct: 77 LYWLDWRKTS--DRYNLAMHISYPNITDAARSRREGVDPGGMIMIHGTPDTEEFPEQYFH 134 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC AM + + E++ V+D + + I P Sbjct: 135 TLDWTDGCIAMRNVDMREVWGLVKDGTM-------IEIRP 167 >gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath] Length = 292 Score = 131 bits (330), Expect = 9e-30 Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW +Y+LI+ Y I SG GPK R+GD Sbjct: 95 PYFERAGVAFPPREVVLVGLKQEKKLELWARDGS-DYRLIRHYDIQAASGSAGPKLRQGD 153 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D H G + IHG VS G Sbjct: 154 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 211 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 212 CLAMGDEAIEELFVLT---AQVGKENVKVVIAP 241 >gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 140 Score = 131 bits (330), Expect = 1e-29 Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 27/144 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K R++ L + + +++SY I +G K +EGD ++PEG Y++ + N Sbjct: 11 IVVYKSRREMLLLRGES-----ILRSYRIALGRDPIGHKFQEGDGRTPEGCYTID--RRN 63 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------ACVSVGCYAMTDAQI 123 P S+Y+L+++I +P A D G +MIHG + + GC A+++ ++ Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 DEI++ V D + I P Sbjct: 124 DEIWSLVPDGT-------PIEILP 140 >gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] Length = 160 Score = 131 bits (329), Expect = 1e-29 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 27/149 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + ++K ER + L +++SY I G K EGD ++PEG Y + Sbjct: 26 PQVTRVLVYKGERMMYLMHNND-----VLESYEIELGFAPEGHKLEEGDGRTPEGEYMID 80 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVGCYAM 118 + NP+S++YL+I I +PN D A G + IHG +VGC A+ Sbjct: 81 --RRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAV 138 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 T+A++ +I+A V + +SIYP Sbjct: 139 TNAEMRQIYAMVENGT-------PISIYP 160 >gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 213 Score = 131 bits (329), Expect = 1e-29 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 31/162 (19%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + K + + K R++ L ++K+Y I + LG K+ EGD + Sbjct: 66 PSKFKTYSGPPVTQVVVNKGARQMLLLNGN-----TVLKAYRIGLGNEPLGHKQFEGDGK 120 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------- 108 +PEG Y + + NPDSRY+L+I I +PN +D G + IHG Sbjct: 121 TPEGLYYID--RRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALS 178 Query: 109 ---ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+TDA++++I+A VRD + I P Sbjct: 179 RLRQDWTAGCIAVTDAEVEDIYAMVRDGT-------PIMITP 213 >gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 165 Score = 131 bits (329), Expect = 1e-29 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 34/165 (20%) Query: 3 SKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 S + PG + + K E +++++ +LIKSY I G K +EGD Sbjct: 15 SVQANAIKPGQKVDLVVVNKAEAQMQVFYR-----GELIKSYRIAMGDNPKGHKLKEGDQ 69 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG-------- 108 ++P+G Y + + DS YY +I+I +PN D G +MIHG Sbjct: 70 RTPQGRYLLDFKK--ADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLS 127 Query: 109 ------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+ +DE++ + + I+P Sbjct: 128 AEEAQKYNWTNGCIAVTNRDMDELWQLIDPGT-------PIEIWP 165 >ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 Length = 138 Score = 131 bits (329), Expect = 1e-29 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + K ER+L+L + +K+Y I G K REGD ++PEG Y + + Sbjct: 3 DKVLVIKSERRLQLISR-----GEPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRK 57 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC--------------VSVGC 115 + R+ LA++I +PN D A G +MIHG + GC Sbjct: 58 QS--DRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGC 115 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 AM + + E++ VRD + Sbjct: 116 IAMRNRDMQEVWDLVRDGTLIEI 138 >ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 Length = 139 Score = 130 bits (328), Expect = 2e-29 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I I K RK+ L + +++K Y + G K+ EGD ++PEG Y + Sbjct: 1 PAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VS 112 + NP+S ++L++ I +PN+ D A+ G + IHG + Sbjct: 56 --RRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+ + +I+EI+A VRD V Sbjct: 114 AGCIAVKNDEIEEIYAMVRDGTVITL 139 >gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 188 Score = 130 bits (327), Expect = 2e-29 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 33/155 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K +EGD ++P+G Y++ Sbjct: 48 GKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLD 102 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------------ACVS 112 + PDS YY +I+I +PN D+ G +MIHG + Sbjct: 103 YKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWT 160 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+A++DE++ V + + I+P Sbjct: 161 DGCIAITNAEMDEVWKVVDEGT-------PIEIWP 188 >gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 130 bits (327), Expect = 2e-29 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 28/147 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ Sbjct: 59 KVERIVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDY 113 Query: 73 NQLNPDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHG----------------ACV 111 NP S+Y A+++ +PN D +A G + G +MIHG Sbjct: 114 K--NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNW 171 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ +I+EI++ V++ + Sbjct: 172 TQGCVAVTNPEIEEIYSLVKEKTLIEI 198 >gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 309 Score = 130 bits (327), Expect = 2e-29 Identities = 35/205 (17%), Positives = 55/205 (26%), Gaps = 47/205 (22%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP + I + E +L + A L PI G ++ Sbjct: 85 PQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL----PIGIGQAG---------RET 131 Query: 64 PEGFYSVQPNQL---------NPDSRYYLAI-------NIGFPNAYDRAHGYTGKYLMIH 107 P + + + N Y G N Y G+ IH Sbjct: 132 PRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYAIH 191 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC + + I +F V Q+ P + + Sbjct: 192 GTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRV-----QIIDRPVKFSVE----PD 242 Query: 160 NSPNYDFWKQLKPGYDYFEQTRKPP 184 S + + L FE +K P Sbjct: 243 GSRWLEVHEPLSRNRAEFESDKKVP 267 >gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 171 Score = 129 bits (325), Expect = 4e-29 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 34/152 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWS-GGLGPKRREGDFQSPEGFYSVQPNQ 74 + + K +L+L + + +KSY I GPK EGD ++PEGFY + + Sbjct: 34 KVLVLKSAHQLQLI-----ADGKPLKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRK 88 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGC 115 + ++ L+++I +PN D A G +MIHG + GC Sbjct: 89 TSE--KFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGC 146 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM + + E++ V D + + I P Sbjct: 147 IAMRNVDMREVWNLVPDGTM-------IEIRP 171 >gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella burnetii RSA 493] Length = 233 Score = 129 bits (324), Expect = 5e-29 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K P + + +FK +++LW G ++ I+S+PI SGG GPK +GD Sbjct: 54 PYFKRAGVSYPPKDISLLVFKNSHRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGD 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + NP SR+ L++ + +PN+ DR + G + IHG+ S+G Sbjct: 113 HQVPEGVYKIV--GFNPASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIG 170 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C + + I+++F A++ G+ ++V I P Sbjct: 171 CIPIGNKAIEQLFVL---AYLVGERHIKVIIAP 200 >gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 166 Score = 128 bits (323), Expect = 6e-29 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 29/153 (18%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G PV +++ K +RK+ L ++++ Y + G K+ EGD ++PEG Y Sbjct: 28 YDGPPVTSVQVHKADRKMYLLNGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGVY 82 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG---------ACVSVG 114 + NP S Y+L++ I +PN D+ G + IHG + G Sbjct: 83 FIDRQ--NPRSTYHLSLGISYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAG 140 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C A+TD +++E+++ VR + I P Sbjct: 141 CIAITDDEVEEVYSMVRLGT-------PIYILP 166 >gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Erythrobacter litoralis HTCC2594] Length = 169 Score = 128 bits (323), Expect = 7e-29 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 32/164 (19%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREG 59 P + + + P ++ + K +R L L++ + ++ Y + LG KR EG Sbjct: 21 PTPQPVSVEAPP-VDFLLVDKSDRTLALYR-----DGAEVRRYTGLQFGDAPLGHKRFEG 74 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC---- 110 D ++PEG Y++ NP+S YYL++ + +PNA DRA+ G + +HG Sbjct: 75 DERTPEGRYTIDT--RNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLP 132 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A T+A++DE++ VRD + I P Sbjct: 133 AGRMPGDWTDGCIAFTNAEMDELWRLVRDGT-------PIEIRP 169 >gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 333 Score = 128 bits (322), Expect = 1e-28 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S I I K+ R++ L ++K+Y I +GPK R+GD ++PEG Y++ Sbjct: 193 PSLDKILIEKQARRMMLISK-----GAVLKTYRIALGGDPIGPKERQGDNKTPEGAYTID 247 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIH--------------GACVS 112 N DSRY+ A++I +PN DR G +MIH G + Sbjct: 248 A--RNRDSRYHRALHISYPNERDRKRARELGVSPGGNIMIHGIKNGFSWVGDAHAGVDWT 305 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+TD +I+EI + + Sbjct: 306 KGCIAVTDEEIEEIDTLAPNGTIVEIR 332 >gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] Length = 171 Score = 128 bits (321), Expect = 1e-28 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 26/144 (18%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 ++I K ER++ L + + IK Y + G K +EGD ++PEG Y + + Sbjct: 34 DLVKIDKSERRMYLLEN-----GKTIKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYKK 88 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVGC 115 DS +Y A++I +PN D + G +MIHG + GC Sbjct: 89 --EDSSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGC 146 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQP 139 A+T++++D+ + V+ Sbjct: 147 IALTNSEMDQFMSLVKVGTKIHIE 170 >gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 431 Score = 127 bits (320), Expect = 1e-28 Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 21/158 (13%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQL--IKSYPICKWSGGLGPKRREG 59 V + L Q P I + + +L L++ + + + Y I G K EG Sbjct: 154 VPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYITHGKLGA-EKLVEG 212 Query: 60 DFQSPEGFYSVQP---NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------ 110 D ++P G Y V Q D A + +PN +D+ G G + +HG Sbjct: 213 DKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGGSGIWLHGTPSNTFAR 272 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 S GC +T+ +D + ++ V I Sbjct: 273 PPRASDGCVVLTNQDLDVVAKNLQVGL------TPVII 304 >gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 188 Score = 127 bits (319), Expect = 2e-28 Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 28/159 (17%) Query: 4 KELKQQLPGSP-VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG-GLGPKRREGDF 61 + LP I + K ++ + L + +++K+Y I S G K+REGD Sbjct: 34 QPPAYALPEQQADRIVVSKGDKTMYLLRGD-----RILKTYRIAMGSNWNQGHKQREGDE 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 ++PEG Y + NP S +L++++ +PNA D G +MIHG Sbjct: 89 RTPEGTYRIDW--RNPRSIAHLSLHVSYPNAEDSERARQAGYSPGGNIMIHGLPNGWGAM 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 + GC A+T+ ++ EI++ + + Sbjct: 147 GRLHRLLDWTDGCIAVTNDEMREIWSLTPNGTSITIKAE 185 >gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 127 bits (319), Expect = 2e-28 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 28/144 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ Sbjct: 77 RIVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK-- 129 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------VSVG 114 NP S++ ++++ +PN D A+ G +MIHG ++G Sbjct: 130 NPKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLG 189 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C A+T+ +I+EI+A V++ + Sbjct: 190 CIAVTNKEIEEIYALVKERTLVEV 213 >gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewanella oneidensis MR-1] Length = 171 Score = 126 bits (316), Expect = 4e-28 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 33/155 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 31 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 85 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------------ACVS 112 + DS YY +I+I +PN D+ G +MIHG + Sbjct: 86 YKKS--DSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 143 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+A++DE++ V + + I+P Sbjct: 144 DGCIAITNAEMDEVWKAVDEGT-------PIEIWP 171 >gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 181 Score = 125 bits (315), Expect = 5e-28 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 33/154 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K ++ + + + + IKSY I G K +EGD ++P+G Y + Sbjct: 42 KVDLVVVNKSASRMSIIR-----DGKTIKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDY 96 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------------ACVSV 113 + DS +Y +I+I +PN D+ G +MIHG + Sbjct: 97 KKS--DSAFYKSIHISYPNEEDKLRADALGISPGGMIMIHGENPKSTLPPEEAQKYNWTN 154 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 GC A+T+ ++DE++ + + I+P Sbjct: 155 GCIAVTNKEMDELWRMIEPGT-------PIEIWP 181 >ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 Length = 141 Score = 125 bits (314), Expect = 7e-28 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 28/147 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ Sbjct: 2 KVERIVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDY 56 Query: 73 NQLNPDSRYYLAINIGFPNAYD----RAHGYT-GKYLMIHG----------------ACV 111 NP S+Y A+++ +PN D +A G + G +MIHG Sbjct: 57 K--NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNW 114 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ +I+EI++ V++ + Sbjct: 115 TQGCVAVTNPEIEEIYSLVKEKTLIEI 141 >gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 171 Score = 125 bits (314), Expect = 7e-28 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 30/159 (18%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + + G P+ I + K +RK+ L K +++KSY + + GPK+ EGD ++ Sbjct: 27 QPSKTYQGPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDGRT 81 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG---------- 108 PEG Y + + NP SRY+L++ I +P+A D A G + IHG Sbjct: 82 PEGMYFID--RFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRALNR 139 Query: 109 ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 A + GC A+TD +I+EIF +R V + IYP Sbjct: 140 ADWTAGCIAVTDEEIEEIFTMLRPG-------VPIFIYP 171 >gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 192 Score = 125 bits (314), Expect = 7e-28 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 33/152 (21%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + K ER L L+ +KSY I +G K R+GD ++PEG YS+ Sbjct: 55 DSLVAQKGERLLHLYSG-----GAAVKSYRIALGFNPVGAKLRQGDGKTPEGRYSISE-- 107 Query: 75 LNPDSRYYLAINIGFP-----NAYDRAHGYTGKYLMIHGAC--------------VSVGC 115 NP S Y+L++ I +P N +A G + IHG + GC Sbjct: 108 RNPQSSYHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGC 167 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 A+T+ +I+E++ V V IYP Sbjct: 168 IAVTNDEIEELWKAVPVGT-------PVIIYP 192 >gi|69950815|ref|ZP_00638633.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 305 Score = 124 bits (313), Expect = 9e-28 Identities = 33/198 (16%), Positives = 53/198 (26%), Gaps = 47/198 (23%) Query: 7 KQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP + I E +L + L PI G +PE Sbjct: 88 QLILPNAKREGVVINSAEMRLYYYPKGKNTVEVL----PIGIGQIGKD---------TPE 134 Query: 66 -GFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAHGYTGKYLMIHGA 109 +VQ + NP + Y A I P N Y G +HG Sbjct: 135 NWVTTVQRKRANPTWTPTVNIRKSYAAKGITLPAVWPAGADNPMGLFALYVGNLYAVHGT 194 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS 161 VS GC + D I+ ++ V + + + + Sbjct: 195 NATFGIGLRVSSGCVRLRDEDIEHLYNSVPVGTRVEFINQPIKAT---------EEPDGN 245 Query: 162 PNYDFWKQLKPGYDYFEQ 179 + + L F+ Sbjct: 246 RYLEVHEPLSRTQAEFDS 263 >gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protein conserved in bacteria [Psychrobacter cryohalolentis K5] Length = 187 Score = 124 bits (313), Expect = 9e-28 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 28/158 (17%) Query: 4 KELKQQLPGSP--VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 E KQ + + + + K R L+L ++IKSY I +G K+++GD Sbjct: 37 SENKQAMLNNIMIDKVFVDKSARTLQLLSDN-----KVIKSYHIALGGNPVGHKQQQGDK 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG-------- 108 ++P G Y + N S++Y +I++ +PNA D+A G +MIHG Sbjct: 92 RTPTGSYILDYK--NEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHL 149 Query: 109 ------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+TD ++DEI A V Sbjct: 150 AAINQQRDWTDGCIAVTDNEMDEIMAAVEIGTPIEIVE 187 >DUF949_Q6LJZ6_66-236_PF06104.2 Length = 171 Score = 124 bits (312), Expect = 1e-27 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 12/152 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW + IK Y I K SG GPK REGD Sbjct: 2 MFEQVGVQYPPEQIAMFALKEEMQVELWAKDGEA-WVYIKRYDIAKISGKSGPKLREGDH 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 61 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 118 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM D I+E+F V +VQV I P Sbjct: 119 LAMGDIAIEELFLLVE---RAQIQNVQVVISP 147 >gi|37675934|ref|NP_936330.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 161 Score = 124 bits (311), Expect = 2e-27 Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 26/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ Sbjct: 21 EQVDWVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLD 75 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 + +S +Y +++I +PN D G + +HG + Sbjct: 76 Y--VTEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWT 133 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+T+ ++DE V+ Sbjct: 134 NGCIALTNQEMDEFIRLVKMGTPIHIE 160 >gi|69945495|ref|ZP_00636533.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 304 Score = 123 bits (309), Expect = 3e-27 Identities = 36/198 (18%), Positives = 58/198 (29%), Gaps = 47/198 (23%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + +++ PI G +PE Sbjct: 87 QLILPNAPREGIVINVAEMRLYYYPKGKN----IVEVLPIGIGQIGKD---------TPE 133 Query: 66 -GFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAHGYTGKYLMIHGA 109 +VQ + NP + YLA P N Y G IHG Sbjct: 134 KWVTTVQRKRANPTWTPTPRIRKEYLAKGEVLPAVWPAGPDNPMGLFALYIGNLYAIHGT 193 Query: 110 CV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS 161 S GC + DA I+ +F V + + + + + Sbjct: 194 NATFGIGLRISQGCIRLRDADIEHLFNSVPEGTRVEFTNQPIKA---------SEEPDGN 244 Query: 162 PNYDFWKQLKPGYDYFEQ 179 + + L +E Sbjct: 245 RYLEVHQPLSRTMAEYES 262 >gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 167 Score = 122 bits (308), Expect = 3e-27 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 30/160 (18%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDFQS 63 + P +R+ K R+L L + ++S+ I LG KR EGD ++ Sbjct: 21 SANEIRPEDIASVRVEKSARRLLLLD----ADGATLRSFSNIQLGDAPLGHKRFEGDERT 76 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC-------- 110 PEG Y + N S Y+L+++I +P+A DRA+ G + IHG Sbjct: 77 PEGRYVIDHG--NARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFIHGQPNSLASGRI 134 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+++A+IDEI+A V D + I P Sbjct: 135 EGDWTDGCIALSNAEIDEIWALVGDGT-------PIEIVP 167 >gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 153 Score = 122 bits (307), Expect = 4e-27 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 26/146 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 14 AVDLVKVDKSKRRMYLME-----QGTILKEYRIALGASPKGHKQEEGDNRTPEGEYTLDY 68 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +++I +P+A D G + IHG + Sbjct: 69 --VIEDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTN 126 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+T+ ++DE V Sbjct: 127 GCIAITNEEMDEFIQLVEMGTPIQIE 152 >gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 175 Score = 122 bits (307), Expect = 4e-27 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 33/163 (20%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 ++ P + + ++K +R LEL + LI+SY + +GPK R GDF++ Sbjct: 27 QDPDLASPPTVDRVVVYKSKRLLELRSGQN-----LIRSYRVALGRNPVGPKVRAGDFRT 81 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC-------- 110 PEG Y + L SR++ +I+I +PN D A G +MIHG Sbjct: 82 PEGIYRLDRRSL--QSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGP 139 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + GC A+T+A++ EI+ VR+ + I P Sbjct: 140 SHASFDWTKGCIAVTNAEMTEIWHLVRNGT-------PIEILP 175 >gi|68515740|gb|EAN39455.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 304 Score = 122 bits (307), Expect = 5e-27 Identities = 36/203 (17%), Positives = 59/203 (29%), Gaps = 47/203 (23%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + ++++ PI G +PE Sbjct: 87 QLILPDAPREGIVINIAEMRLYYYPKGK----KIVEVLPIGIGQVG---------RDTPE 133 Query: 66 -GFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAHGYTGKYLMIHGA 109 +VQ + NP + Y A + P N Y G IHG Sbjct: 134 NWVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYIGNLYAIHGT 193 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS 161 VS GC + D I+ +F V + + + + Sbjct: 194 NATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKAT---------EEPDGA 244 Query: 162 PNYDFWKQLKPGYDYFEQTRKPP 184 + + L F+ P Sbjct: 245 RYLEVHQPLSRTQAEFDSAEPVP 267 >gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 306 Score = 122 bits (307), Expect = 5e-27 Identities = 32/205 (15%), Positives = 47/205 (22%), Gaps = 47/205 (22%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP + I I E +L + L PI G + Sbjct: 88 PQQLILPDTVHEGIIINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKD---------T 134 Query: 64 PE-GFYSVQPNQLNPDSRYYLAINIGF---------------PNAYDRAHGYTGKYLMIH 107 P V+ + P ++ + N Y G+ IH Sbjct: 135 PINWTTKVERKKAGPTWTPTAKMHTEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIH 194 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC + + I +F V V Sbjct: 195 GTNANFGIGLRVSHGCVRLRNDDIKFLFENVPVGTRVQFIDEPVKAT---------TEPD 245 Query: 160 NSPNYDFWKQLKPGYDYFEQTRKPP 184 S + L FE P Sbjct: 246 GSRYIEVHNPLSTTEAQFEGKEAVP 270 >gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] Length = 246 Score = 122 bits (307), Expect = 5e-27 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 12/152 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW + IK Y I K SG GPK REGD Sbjct: 67 MFEQVGVQYPPEQIAMFALKEEMQVELWAKDGEA-WVYIKRYDIAKISGKSGPKLREGDH 125 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 126 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 183 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 AM D I+E+F V +VQV I P Sbjct: 184 LAMGDIAIEELFLLVE---RAQIQNVQVVISP 212 >gi|24375244|ref|NP_719287.1| LysM domain protein [Shewanella oneidensis MR-1] Length = 304 Score = 122 bits (306), Expect = 6e-27 Identities = 35/201 (17%), Positives = 51/201 (25%), Gaps = 47/201 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP +P I I E +L + + ++ PI G + Sbjct: 85 PKQLILPNAPREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------T 131 Query: 64 PE-GFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIH 107 PE SVQ + NP I G N Y G IH Sbjct: 132 PENWVTSVQRKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIH 191 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC + I+ +F V + + + Sbjct: 192 GTNASFGIGLRVSQGCVRLRHDDIEHLFKTVPIGTRVQFVNQPIKAT---------EEPD 242 Query: 160 NSPNYDFWKQLKPGYDYFEQT 180 + L FE Sbjct: 243 GKRYLAVHQPLSRTIAEFESN 263 >ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 Length = 139 Score = 122 bits (306), Expect = 7e-27 Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ Sbjct: 1 EQVDWVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 + +S +Y +++I +PN D G + +HG + Sbjct: 56 Y--VTEESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE V+ Sbjct: 114 NGCIALTNQEMDEFIRLVKMGTPIHI 139 >gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigella flexneri 2a str. 301] Length = 306 Score = 121 bits (305), Expect = 7e-27 Identities = 32/205 (15%), Positives = 47/205 (22%), Gaps = 47/205 (22%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP + I I E +L + L PI G + Sbjct: 88 PQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKD---------T 134 Query: 64 PE-GFYSVQPNQLNPDSRYYLAINIGF---------------PNAYDRAHGYTGKYLMIH 107 P V+ + P ++ + N Y G+ IH Sbjct: 135 PINWTTKVEHKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIH 194 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC + + I +F V V Sbjct: 195 GTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKAT---------TEPD 245 Query: 160 NSPNYDFWKQLKPGYDYFEQTRKPP 184 S + L FE P Sbjct: 246 GSRYIEVHNPLSTTEAQFEGQEIVP 270 >ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 Length = 141 Score = 121 bits (305), Expect = 8e-27 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 28/144 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ Sbjct: 5 RIVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK-- 57 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------VSVG 114 NP S++ ++++ +PN D A+ G +MIHG ++G Sbjct: 58 NPKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C A+T+ +I+EI+A V++ + Sbjct: 118 CIAVTNKEIEEIYALVKERTLVEV 141 >gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633] Length = 165 Score = 121 bits (304), Expect = 1e-26 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 26/146 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 26 AVDLVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY 80 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +++I +P+A D + G + IHG + Sbjct: 81 --VIEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 138 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+T+ ++DE V Sbjct: 139 GCIALTNEEMDEFIQLVTMGTPITIE 164 >gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 186 Score = 121 bits (304), Expect = 1e-26 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 27/158 (17%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + + + + I K R L L + + + I+SY I + G K+ EGD Sbjct: 35 TPPPMAEAHQQADEILVI-KSTRALHLLR-----DGETIRSYDISLGAAPEGHKQSEGDE 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 ++PEG Y + NP+S +L+++I +PNA D+A G +MIHG Sbjct: 89 RTPEGRYEIDW--RNPNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGAL 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+T+A++ EI++ V D Sbjct: 147 GALHLMLDWTDGCIAVTNAEMREIWSLVPDGTPITIAE 184 >gi|49610290|emb|CAG73734.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 365 Score = 120 bits (302), Expect = 2e-26 Identities = 32/196 (16%), Positives = 49/196 (25%), Gaps = 33/196 (16%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---------KR 56 + LP +P I I E +L + + + PI G ++ Sbjct: 90 QLILPDAPREGIVINSAEMRLYYYPKGS----KTVVVLPIGIGELGKDTPINWTTSVQRK 145 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------ 110 + G +P + + G N Y G IHG Sbjct: 146 KAGPTWTPTAKMHAEYAARGETLQ--KVFPAGPDNPMGLYALYIGNLYAIHGTNANFGIG 203 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 VS GC + I +F V + V T S + Sbjct: 204 LRVSHGCVRLRADDIKYLFNSVPVGTRVQFINEPVKA-----TVE----PDGSRYVEVHN 254 Query: 169 QLKPGYDYFEQTRKPP 184 L + F P Sbjct: 255 PLSRTVEEFHSDSPAP 270 >ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 Length = 139 Score = 119 bits (300), Expect = 3e-26 Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 2 AVDLVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY 56 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSV 113 + DS +Y +++I +P+A D + G + IHG + Sbjct: 57 --VIEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 114 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE V Sbjct: 115 GCIALTNEEMDEFIQLVTMGTPITI 139 >ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 Length = 139 Score = 119 bits (300), Expect = 3e-26 Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 1 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------------ACVS 112 + DS YY +I+I +PN D+ G +MIHG + Sbjct: 56 YKKS--DSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+A++DE++ V + Sbjct: 114 DGCIAITNAEMDEVWKAVDEGTPIEI 139 >gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 417 Score = 119 bits (300), Expect = 3e-26 Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 19/148 (12%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 P + + + +L +++ + + L+ Y I G K EGD ++P G Y Sbjct: 150 MSPEQRYAVVVDTTKSRLYVYQNRDSQLHHLV-DYYITMGKNG-SEKFTEGDKRTPLGIY 207 Query: 69 SVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYA 117 PD A + +PN D+ HG G + +HG S GC Sbjct: 208 IADKKLEHKLPDFYGEAAYPLNYPNPLDKRHGKKGHGIWLHGTPQDVYSRPPKASDGCVV 267 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + + I + ++ + V I Sbjct: 268 IANPDIKALAPVLQQG------ATPVII 289 >gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 194 Score = 119 bits (299), Expect = 4e-26 Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 20/152 (13%) Query: 2 VSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRR 57 + +E + P I + +R+L Y + G G K Sbjct: 50 IPRETVAYAGKEKPGTIVVSTSQRRLYYVLGGGEAI-----RYGVGVGRQGFSWSGTKTI 104 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC------ 110 G + P Q PD Y+A N Y G L IHG+ Sbjct: 105 TGKKEWPAWRPPAQMLARRPDLPRYMAGGQD--NPLGARAMYLGSSLYRIHGSNEPETMG 162 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC MT+ + +++ V+ Sbjct: 163 AAVSSGCIRMTNKDVVDLYDRVKVGTKVIVKD 194 >gi|68543641|ref|ZP_00583338.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 304 Score = 119 bits (299), Expect = 4e-26 Identities = 33/192 (17%), Positives = 48/192 (25%), Gaps = 46/192 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE-GFYSVQ 71 I I E +L + + ++ PI G +PE SVQ Sbjct: 94 PREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------TPENWVTSVQ 140 Query: 72 PNQLNPDS-------RYYLAINIGFP--------NAYDRAHGYTGKYLMIHGAC------ 110 + NP + Y A P N Y G IHG Sbjct: 141 RKRANPTWTPTPRIRKEYAAKGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIG 200 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 VS GC + I+ +F V + + + + Sbjct: 201 LRVSQGCVRLRHEDIEHLFKNVPVGTRVQFVNQPIKAT---------EEPDGKRYLAVHQ 251 Query: 169 QLKPGYDYFEQT 180 L FE Sbjct: 252 PLSRTVAEFESN 263 >gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 209 Score = 118 bits (296), Expect = 9e-26 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 30/160 (18%) Query: 1 PVSKELKQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 P+ + Q P +P+ I + K R++ +++ +++ I G K Sbjct: 56 PIFQRPPVQ-PEAPIASPVRRILVEKSARRMTVYQESGPP-----RTFRIALGFSPEGDK 109 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC 110 REGD ++PEG + + +LN S Y+L++ I +P + R G +MIHG Sbjct: 110 SREGDGRTPEGIFRID--RLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIHGQP 167 Query: 111 ------------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+ +A+I+EIFA R Sbjct: 168 NQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHARIGTEVEI 207 >gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str. N16961] Length = 194 Score = 118 bits (296), Expect = 9e-26 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 33/153 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +++ K +R++ L + ++I+ Y I G K++EGD ++PEG Y + Sbjct: 55 QVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF 109 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGA--------------CVSV 113 + DS +Y +I+I +PN D G + IHG + Sbjct: 110 --IIEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTN 167 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 GC A+T+ ++DE + V+ V + I Sbjct: 168 GCIAITNQEMDEFLSLVQPG-------VPILIE 193 >gi|69926066|ref|ZP_00623537.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 187 Score = 118 bits (296), Expect = 1e-25 Identities = 33/153 (21%), Positives = 51/153 (33%), Gaps = 20/153 (13%) Query: 1 PVSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ ++ + Q +P I I ER+L L Y I G G R Sbjct: 42 PIPRQLVHFQSRYAPGTIVISTGERRLYLVLPDGQAL-----RYGIGVGRDGFRWGGVHR 96 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC----- 110 + P Q + PD ++ I N Y G L IHG+ Sbjct: 97 ITAKKEWPSWTPPAQMLRRRPDLPRHMKGGID--NPLGARALYLGSTLYRIHGSNEPETI 154 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC+ MT+ + +++ V + Sbjct: 155 GHAVSSGCFRMTNEDVKDLYDRVSVGTTVVVKN 187 >gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 283 Score = 116 bits (292), Expect = 2e-25 Identities = 27/153 (17%), Positives = 42/153 (27%), Gaps = 21/153 (13%) Query: 1 PVSKELKQQLPGSP--VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + + G I I + L L + Y + G G K Sbjct: 138 PKFERQLVEYHGKEAAGTIVIDTSNKFLYLVQGGGKAL-----RYGVGVGKPGFLWAGTK 192 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG------ 108 + P + + PD ++ N Y G L IHG Sbjct: 193 TISAKREWPAWTPPAEMLKRRPDLPRHMVGGPQ--NPLGARAMYLGSSLYRIHGSNEPWT 250 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ VR Sbjct: 251 IGTNVSSGCIRMRNRDVIDLYDRVRVGATVVVI 283 >gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 309 Score = 116 bits (292), Expect = 3e-25 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 26/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y ++ Sbjct: 169 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIE 223 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 224 --GRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 281 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+TD +I+EI + V Sbjct: 282 QGCIAVTDEEIEEIAEAAPNGTVVEIR 308 >gi|26247257|ref|NP_753297.1| Hypothetical protein ycfS precursor [Escherichia coli CFT073] Length = 377 Score = 115 bits (289), Expect = 5e-25 Identities = 37/198 (18%), Positives = 55/198 (27%), Gaps = 47/198 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ LP +P I I E +L + + YPI G GD + Sbjct: 148 PLQTLLPDAPREGIVINIAELRLYYYPPGKNS----VTVYPIGIGQLG-------GDTLT 196 Query: 64 PEGFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYD---RAHGYTGKYLM 105 P +V + NP Y A I P N G + Sbjct: 197 PTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYL 256 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 +HG VS GC + D I +F+ V + + I Sbjct: 257 LHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKI---------SAE 307 Query: 158 HRNSPNYDFWKQLKPGYD 175 + + + L D Sbjct: 308 PNGARLVEVHQPLSEKID 325 >gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitrosomonas europaea ATCC 19718] Length = 326 Score = 115 bits (288), Expect = 8e-25 Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 34/156 (21%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 + + I E +L + G+ I ++P+ D+ +P G ++ Sbjct: 100 RIGLVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---------DWNTPLGRTTIVRK 150 Query: 74 QLNPDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMIHGAC------ 110 Q +P ++ G N R Y G +IH Sbjct: 151 QKDPTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYALYLGLPGYLIHSTNKPFGVG 210 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 V+ GC + I+E+F V + V Sbjct: 211 MRVTHGCMRLYPEDIEELFNLVPTGTPVQIVNQPVK 246 >gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Bradyrhizobium japonicum USDA 110] Length = 314 Score = 114 bits (287), Expect = 9e-25 Identities = 26/150 (17%), Positives = 41/150 (27%), Gaps = 21/150 (14%) Query: 1 PVSKELKQQLPGSP--VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ G I + + L L + Y I G G K Sbjct: 169 PKFEKQLVDYSGKESAGTIVVDTPNKFLYLVEGNGRAM-----RYGIGVGRPGFTWSGVK 223 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG------ 108 + P+ + PD ++ N Y G L IHG Sbjct: 224 AITAKREWPDWTPPAEMIARRPDLPRHMEGGPE--NPLGARAMYLGSTLYRIHGSNEPWT 281 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + +++ V Sbjct: 282 IGTNVSSGCIRMRNEDVIDLYGRVNVGTRV 311 >gi|12515680|gb|AAG56665.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933] Length = 334 Score = 114 bits (286), Expect = 1e-24 Identities = 43/228 (18%), Positives = 62/228 (27%), Gaps = 63/228 (27%) Query: 1 PVSKE-------LKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K + LP +P I + E +L + + + YPI GL Sbjct: 74 PVPKPGTTITIPSQLXLPDAPRQGIIVNLAELRLYYYPPGEN----IXQVYPIGIGLQGL 129 Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAH 97 ++P V NP I G N R Sbjct: 130 ---------ETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA 180 Query: 98 GY---TGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV--S 144 +IHG VS GC M I +F+ VR + V S Sbjct: 181 LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS 240 Query: 145 IYPFRM---------TDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 + P M + Q + P L G+ F+ + Sbjct: 241 VEPNGMRYVEVHRPLSAEEQQNVQTMPY-----TLPAGFTQFKDNKAV 283 >gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yersinia pseudotuberculosis IP 32953] Length = 354 Score = 114 bits (285), Expect = 2e-24 Identities = 32/195 (16%), Positives = 46/195 (23%), Gaps = 50/195 (25%) Query: 6 LKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 Q L I I E +L + + YPI G + Sbjct: 88 PNQMLLPDTPREGIVINLAELRLYYYPKGQNK----VIVYPIGIGQLG---------RDT 134 Query: 64 PEGFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAHGY---TGKYLM 105 P S+ NP + YLA I P N + + Sbjct: 135 PTMVTSISQKIPNPTWTPTANIRKNYLAEGITLPSVVPAGPDNPMGQFALRLSAGRGEYL 194 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG VS GC + I+ +F V + V Sbjct: 195 IHGTNADFGIGLRVSSGCIRLRPDDIEALFNSVPKGTRVQIINEPVKYA---------VE 245 Query: 158 HRNSPNYDFWKQLKP 172 + + L Sbjct: 246 PDGKRYVEVHQPLSR 260 >gi|71548630|ref|ZP_00668854.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 323 Score = 114 bits (285), Expect = 2e-24 Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 34/153 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + + G+ I ++P+ D+ +P G ++ Q + Sbjct: 103 LVINLPEMRLYYFPKPIKGQKPEIITHPVSIGRM---------DWNTPLGKTTIVRKQKD 153 Query: 77 PDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMIHGAC--------V 111 P ++ G N + Y G +IHG V Sbjct: 154 PTWTPPQSLRKEAIEEGRPPLLDVVPAGPDNPLGKYALYLGLPGYLIHGTNKPLGVGMRV 213 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 + GC + I+E+F + + + Sbjct: 214 THGCMRLYPEDIEELFNLIPTGTPVQIVNQPIK 246 >gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 415 Score = 113 bits (284), Expect = 2e-24 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 14/134 (10%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ--- 71 I + +L L+ G +LI Y I G K ++GD ++P G Y V Sbjct: 153 HVIAVDLTRSRLFLFD-NREGMPKLIADYYISSGKKGA-EKIKQGDKRTPAGLYYVTEYI 210 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA---------CVSVGCYAMTDAQ 122 P + PD A+ I +PN +DR H TG + +HG S GC A+T+ Sbjct: 211 PGEKLPDLYGAGAMPINYPNEWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLD 270 Query: 123 IDEIFAFVRDAFVG 136 +E+ Sbjct: 271 FEELEEKTSIGTPV 284 >gi|71282503|ref|YP_270846.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Colwellia psychrerythraea 34H] Length = 303 Score = 113 bits (284), Expect = 2e-24 Identities = 31/179 (17%), Positives = 51/179 (28%), Gaps = 45/179 (25%) Query: 6 LKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 Q L S I I E +L + + + +P+ GL + Sbjct: 88 PNQMLLPFISRKGIVINLPELRLYYYSPEENK----VHVFPVGIGRQGLS---------T 134 Query: 64 PEGFYSVQPNQLNPDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMI 106 P + + +PD R + G N + + G +I Sbjct: 135 PLTSTVIGEKRKDPDWRPTKEMQKRHFAEHGEYLPDVVPAGPNNPFGKYALRLGTSEYLI 194 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 HG+ S GC M D I +F V + V +M+ N + Sbjct: 195 HGSNKRFGIGMRASSGCIRMYDDDIKWLFDNVPVNTKVRVVNQPV-----KMSFENGDK 248 >gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 112 bits (282), Expect = 3e-24 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 20/153 (13%) Query: 1 PVSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ + + +P I + ER+L L Y I G G R Sbjct: 59 PIPRTTVNYSGNYAPGTIVVNTSERRLYLVLQNGQAL-----RYGIGVGRDGFRWGGVHR 113 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC----- 110 + P+ Q PD ++ I N Y G L IHG+ Sbjct: 114 ITAKKEWPDWTPPSQMLARRPDLPRHMKGGIE--NPLGARAMYLGSTLYRIHGSNEPETI 171 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC+ MT+ + ++++ V + Sbjct: 172 GQAVSSGCFRMTNDDVSDLYSRVSVGTTVVVLN 204 >gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibrio parahaemolyticus RIMD 2210633] Length = 308 Score = 112 bits (282), Expect = 3e-24 Identities = 34/208 (16%), Positives = 55/208 (26%), Gaps = 50/208 (24%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P I I E +L + ++ +P+ G + Sbjct: 91 PSQLILPEVPHQGIVINLAELRLYYFPEGED----VVHVFPVGIGRIG---------RDT 137 Query: 64 PEGFYSVQPNQLNPDSRY-------YLAINIGFP--------NAYDR---AHGYTGKYLM 105 P S+ + NP Y A + P N Y + Sbjct: 138 PVMTTSISQKRPNPTWTPPASIRAEYRAKGVDLPAVVPAGPDNPLGLFALRLAYGNGEYL 197 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG VS GC M + I+ +F VR + V + Sbjct: 198 IHGTNKDFGIGMRVSAGCIRMDPSDIEWLFDKVRRGEKVNIINQPVKV---------SLE 248 Query: 158 HRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 S + + L + + P Sbjct: 249 PDRSVFVEAHEPLTRSNGE-KDHLQVPK 275 >gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesorhizobium loti MAFF303099] Length = 426 Score = 112 bits (282), Expect = 4e-24 Identities = 32/158 (20%), Positives = 50/158 (31%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK--RR 57 P + G P I I R+L L + + + Y I GL K Sbjct: 274 PEFVPQDVEFTGYEPGTIVIDTSARRLYLVE-----SFSTARRYAIAVGREGLQFKGTVA 328 Query: 58 EGDFQ-SPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAH-----GYTGKYLMIHGA 109 GD Q P ++ + P +Y + G N G +L IHG Sbjct: 329 VGDKQEWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGT 388 Query: 110 --------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC+ M + + ++++ VR Sbjct: 389 IAPQSIGTSASNGCFRMINEHVMDLYSRVRVGTKVVII 426 >gi|75855745|ref|ZP_00763388.1| COG1376: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 301 Score = 112 bits (282), Expect = 4e-24 Identities = 34/208 (16%), Positives = 55/208 (26%), Gaps = 50/208 (24%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P I I E +L + ++ +P+ G + Sbjct: 84 PTQLILPDVPHKGIVINLAELRLYYFPKGED----IVHVFPVGIGRIG---------RDT 130 Query: 64 PEGFYSVQPNQLNPDSRY-------YLAINIGFP--------NAYD---RAHGYTGKYLM 105 P + + NP Y A I P N Y + Sbjct: 131 PVMTTRISQKRPNPTWTPPASIRAEYKAKGIDLPTVVPAGPDNPLGMFALRLAYGNGEYL 190 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG VS GC M + I+ +F VR+ + V + Sbjct: 191 IHGTNKDFGIGMRVSAGCIRMDPSDIEWLFEKVRNGEEVNIINQPVKV---------SLE 241 Query: 158 HRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 S + + L + + P Sbjct: 242 PDRSVFLEAHEPLTRSNGE-KDHLQVPK 268 >gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 231 Score = 112 bits (282), Expect = 4e-24 Identities = 29/152 (19%), Positives = 42/152 (27%), Gaps = 21/152 (13%) Query: 2 VSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKR 56 PG P I I + L L + Y I G G K Sbjct: 87 RFSRQVVAYDGPGRPGGIVIDTNAKFLYLIQPAGQAI-----RYGIGVGRPGFVWTGTKT 141 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC----- 110 + P+ + + PD ++A G N Y G L IHG Sbjct: 142 ITAKREWPDWTPPAEMLRRRPDLPRHMAGGPG--NPLGARAMYLGTSLFRIHGTNEPHTI 199 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ Sbjct: 200 GQNVSSGCIRMMNEDVIDLYERTSVGTRVEVI 231 >gi|68189671|gb|EAN04335.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 266 Score = 112 bits (282), Expect = 4e-24 Identities = 30/162 (18%), Positives = 47/162 (29%), Gaps = 39/162 (24%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +E++ P +P I + +ER L L + Y + G G Sbjct: 120 LPQEVRYDGPQAPGTIVVDTKERFLYLVLKDGQA-----RRYGVGVGKDGFGW------- 167 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLM- 105 G + V + PD R + G N Y G L Sbjct: 168 ---TGTHKVTAKREWPDWRPPAEMIARERKNGKILPTLVKGGPQNPLGARALYLGSTLYR 224 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 IHG VS GC M + + +++ V Sbjct: 225 IHGTNAPWTIGQAVSSGCIRMRNEDVIDLYERVSVGTKVVVI 266 >gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 172 Score = 112 bits (281), Expect = 5e-24 Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 19/148 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 E+ + +P I + +ER+L L YP+ G G E Sbjct: 26 RPDEVSYRSDYAPGTILVKTKERRLYLIVDSDRAI-----RYPVGVGKAGKQWAGTAHIE 80 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY--TGKYLMIHGAC------ 110 G ++ P + + NP +A N A G IHG Sbjct: 81 GKYRDPAWAPPAEVKRDNPRIPDVIAGG-SPSNPMGVAAMTLSGGGQYAIHGTNRPQTVG 139 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + ID+++ V Sbjct: 140 HFVSYGCIRMYNNDIDDLYRRVSIGTPV 167 >gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein conserved in bacteria [Desulfovibrio desulfuricans G20] Length = 429 Score = 112 bits (281), Expect = 5e-24 Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 28/182 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV-- 70 P ++ + K + L L++ ++ +Y G K+ EGD ++PEG Y V Sbjct: 41 PPRFVAVDKSRQTLFLYR--HSSPLEVSATYTCTTGQA-TGDKQVEGDLRTPEGVYFVEH 97 Query: 71 -QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----AC-VSVGCYAMTDAQI 123 L+ D +A + +PN D TG + IHG + GC A+ A I Sbjct: 98 RIDKGLDWDLYGGIAYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADI 157 Query: 124 DEIFAFVRDAFVG----------GQPSVQVSIYPFRMTDANMQ------RHRNSPNYDFW 167 + + + QP + R+ Q + R+ +DF+ Sbjct: 158 EVLGPGLERGLPVIVAQGVNATGAQPEAERGAATARLLAQRSQQWAAAWQARSDDFFDFY 217 Query: 168 KQ 169 Sbjct: 218 AP 219 >gi|69926259|ref|ZP_00623730.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 259 Score = 112 bits (281), Expect = 5e-24 Identities = 26/153 (16%), Positives = 41/153 (26%), Gaps = 21/153 (13%) Query: 1 PVSKELKQQLPGSP--VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ G I I + L L + Y + G G K Sbjct: 114 PKFEKQLVDYHGKETAGTIVIDTSSKFLYLVQGDGKAL-----RYGVGVGKPGFLWAGVK 168 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG------ 108 + P + + PD ++ N Y G L IHG Sbjct: 169 TVTAKKEWPGWTPPAEMLKRRPDLPRHMEGGPQ--NPLGARAMYLGSSLYRIHGSNEPWT 226 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V Sbjct: 227 IGTNVSSGCIRMRNQDVIDLYGRVHVGARVVVI 259 >gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str. Bath] Length = 361 Score = 112 bits (281), Expect = 5e-24 Identities = 33/171 (19%), Positives = 53/171 (30%), Gaps = 39/171 (22%) Query: 2 VSKELKQQLPGSPV-YIRIFKEERKLELWK-AKMGGEYQLIKSYPICKWSGGLGPKRREG 59 V ++ LP +P I + E +L + A G + + +YPI Sbjct: 84 VPRQF--ILPDAPRNGIVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRM--------- 132 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KY 103 D++SP G V +P R +I G N + G Sbjct: 133 DWRSPLGLTKVVAKVKDPVWRPPASIKAEHAKNGEILPDVVPAGPNNPLGQFAMRLGVPG 192 Query: 104 LMIHGAC----------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 +IHG V+ GC M + ++F V + V Sbjct: 193 YLIHGTDQDKSYGIGMRVTHGCIRMYPEDVAKLFPEVAVGTPVNLVNQPVK 243 >ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 Length = 139 Score = 111 bits (278), Expect = 1e-23 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y ++ Sbjct: 1 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIE 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 56 --GRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+TD +I+EI + V Sbjct: 114 QGCIAVTDEEIEEIAEAAPNGTVVEI 139 >gi|67675669|ref|ZP_00472424.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 405 Score = 111 bits (277), Expect = 1e-23 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 34/159 (21%) Query: 9 QLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 LP +P + + E +L + + GE Q +++Y I D+ +P G Sbjct: 149 ILPDTPYEGVVVNIPEMRLYYYPPRKEGEPQRVETYAISVGRM---------DWSTPLGE 199 Query: 68 YSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC- 110 + Q NP +I G N + G +IHG Sbjct: 200 TRITAKQENPPWYPPQSIIEEHAADGRELPDVVPPGPDNPLGKYKMRLGLPGYLIHGTNR 259 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 V+ GC M ++ +F + S Sbjct: 260 PQGVGMRVTHGCIRMFPEDVEHLFGQLPVGTKVNLVSEP 298 >gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 187 Score = 111 bits (277), Expect = 1e-23 Identities = 33/153 (21%), Positives = 50/153 (32%), Gaps = 20/153 (13%) Query: 1 PVSKELKQ-QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ ++L Q +P + I ER+L L Y I G G R Sbjct: 42 PIPRQLVYFQSRYAPGTVVIRTGERRLYLVLPGGQAL-----RYGIGVGRDGFRWSGVHR 96 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC----- 110 + P Q + PD + G N Y G L IHG+ Sbjct: 97 ISAKKEWPSWTPPAQMLRRRPDLP--RFMRGGLENPLGARAMYLGSTLYRIHGSNEPETI 154 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC+ MT+ + +++ V + Sbjct: 155 GQAVSSGCFRMTNDDVVDLYNRVSVGTTVVVKN 187 >gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 321 Score = 111 bits (277), Expect = 1e-23 Identities = 33/168 (19%), Positives = 50/168 (29%), Gaps = 38/168 (22%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ LP +P I I E +L ++ + YPI G GD + Sbjct: 91 PLQTLLPDAPREGIVINLAELRLYYYQPGKNT----VTVYPIGIGQLG-------GDTLT 139 Query: 64 PEGFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYD---RAHGYTGKYLM 105 P ++ + NP Y A I P N G + Sbjct: 140 PTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYL 199 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 +HG VS GC + D I+ +F V + + Sbjct: 200 LHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNIINTPIKA 247 >gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 223 Score = 111 bits (277), Expect = 2e-23 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 39/155 (25%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I ++K +R+L L L++ YPI G K GD ++PEG + + Sbjct: 74 KIYVYKSDRRLLLVNN-----GVLVREYPIGLGFSPNGDKFMRGDGRTPEGQFFICAK-- 126 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY----------------------------TGKYLMIH 107 NP+SR+Y ++ + +P+ G + IH Sbjct: 127 NPNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVLGGDIFIH 186 Query: 108 ----GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G + GC A+ ++ +DE+F+ V Sbjct: 187 GGGAGRDWTWGCVAVRNSAMDELFSIVSVGTPVEV 221 >gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 199 Score = 110 bits (275), Expect = 2e-23 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 19/143 (13%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQ 62 + P +P I + ER+L L Y + G G + + Sbjct: 60 VPYSGPHAPGTIVVSTAERRLYLVLPNGEAL-----RYGVGVGRPGFTWGGTQTITMKRE 114 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSV 113 P+ + + PD Y+ I N Y G + IHG+ VS Sbjct: 115 WPDWRPPAEMLRRRPDLPRYMKGGIE--NPLGARAMYLGNTIYRIHGSNEPETIGTAVSS 172 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC MT+ + +++ V+ Sbjct: 173 GCIRMTNEDVADLYGRVKVGARV 195 >gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Bradyrhizobium japonicum USDA 110] Length = 224 Score = 110 bits (275), Expect = 3e-23 Identities = 25/154 (16%), Positives = 40/154 (25%), Gaps = 23/154 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + I I +L L + Y I GL G Sbjct: 68 QRVDYTTNEPVGTIVIDTAAHQLYLVEGDGKAM-----RYGIGVGKDGLAFAGTATIRRK 122 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY-----TGKYLMIHGA---- 109 + P + P +LA + G N Y IHG Sbjct: 123 AEWPHWTPTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPE 182 Query: 110 ----CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC + + I ++++ V+ Sbjct: 183 TIGRAVSSGCIRLINQDIIDLYSRVKIGSRVVVI 216 >gi|17989404|ref|NP_542037.1| PROTEIN YBIS PRECURSOR [Brucella melitensis 16M] Length = 277 Score = 109 bits (274), Expect = 3e-23 Identities = 24/154 (15%), Positives = 41/154 (26%), Gaps = 23/154 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK------ 55 + + + P I I R L L +A + Y + G K Sbjct: 131 LPQIVSYSGKEKPGTIVIDTASRFLYLVQADGKA-----RRYGVGVGKQGFSWKGTQRIS 185 Query: 56 -RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--- 110 + E +P + + + I N Y G L IHG Sbjct: 186 RKAEWPTWTPPSEMIARERKKGRFLPARMDGGIN--NPLGARALYLGSTLYRIHGTNQPW 243 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC M + + +++ Sbjct: 244 TIGKAMSSGCIRMRNEDVTDLYERTPVGTRVVVR 277 >gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 289 Score = 109 bits (274), Expect = 3e-23 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 35/137 (25%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 S V I + + L L++ + +L+KSYP+ +P G +++ Sbjct: 178 APSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGKPTT---------PTPRGTFTI 223 Query: 71 QPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 Q+NP + + + P + IHG S GC M + Sbjct: 224 INKQVNPGGPFGTRWMGLSQP------------HYGIHGTNNPASIGTAASNGCIRMYNE 271 Query: 122 QIDEIFAFVRDAFVGGQ 138 ++E+F V Sbjct: 272 DVNELFNLVSVGTPVTI 288 >gi|66857904|ref|ZP_00401942.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C] Length = 285 Score = 109 bits (274), Expect = 3e-23 Identities = 28/167 (16%), Positives = 45/167 (26%), Gaps = 35/167 (20%) Query: 1 PVSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P+ LP S P I + E +L L +YP+ Sbjct: 70 PLVVPAAWILPPSAAPGSIVVNLSEMRLYLLPGGGAAPV----TYPVGIGKDRA------ 119 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAI-----------NIGFPNAYDRAHGY-TGKYLMI 106 ++P G ++V + P ++ G N + ++I Sbjct: 120 ---KTPLGSFTVIGKTVAPTWYPPASMRRDDPTLPDRVPPGPDNPLGTHALRLSAGSILI 176 Query: 107 HGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 HG S GC + I +F V V I Sbjct: 177 HGTDEPFGIGRKFSHGCVRLYPEDIPRLFEVVPLKTPVRMVREPVKI 223 >gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 124 Score = 109 bits (273), Expect = 5e-23 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 21/121 (17%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 ++K Y + + G K++EGD ++PEG YS+ + DS +Y A++I +PNA D Sbjct: 5 TVVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYKK--EDSAFYRAMHISYPNAEDVRK 62 Query: 98 GY-----TGKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G ++M+HG + GC A+T++ +DE V+ Sbjct: 63 AKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCIALTNSDMDEFMDKVKVGTPIEI 122 Query: 139 P 139 Sbjct: 123 V 123 >gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 267 Score = 109 bits (272), Expect = 5e-23 Identities = 26/153 (16%), Positives = 40/153 (26%), Gaps = 21/153 (13%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ G I I + L L + Y + G G K Sbjct: 122 PRYEKQLVDYHGGEKAGTIVIDTPNKFLYLVQGDGKAL-----RYGVGVGRPGFTWSGVK 176 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG------ 108 + P + PD ++ N Y G L IHG Sbjct: 177 TITAKREWPAWTPPKEMLARRPDLPRHMEGGPA--NPLGARAMYLGSSLYRIHGSNEPWT 234 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V Sbjct: 235 IGTNVSSGCIRMRNEDVIDLYGRVGVGTKVVVI 267 >gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens DSM 15236] Length = 414 Score = 109 bits (272), Expect = 6e-23 Identities = 41/193 (21%), Positives = 64/193 (33%), Gaps = 38/193 (19%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + + + I I +L L + + G LI Y + GL K EGD Sbjct: 141 LPSQFLALSARNKHAIAIDASRSRLYLLENRPTG-LTLIADYYVSIGKSGLS-KNAEGDL 198 Query: 62 QSPEGFYSVQPNQLNPDS----RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------- 110 ++P G Y + N L+P S A+ I +PN D G TG + +HG Sbjct: 199 RTPMGVYFITSN-LDPKSLKDFYGSGALPINYPNVLDNLRGKTGGGIWLHGTPPGQFSRP 257 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY----------------PFRMTD 152 + GC + + + + V V I PF Sbjct: 258 PLATDGCVVLANPDLMALIRTVEVRT------TPVVISQSLKWVTPNTARSESKPFEEAL 311 Query: 153 ANMQRHRNSPNYD 165 Q ++S N + Sbjct: 312 TAWQNAKSSGNMN 324 >gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100] Length = 332 Score = 109 bits (272), Expect = 6e-23 Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 23/178 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S I + KE+RKL +++ + Q I YP G G K + D ++PEG Y +Q Sbjct: 48 SRYVILVDKEQRKLSVFERNG-EQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQE 105 Query: 73 NQLNPDSRY----YLAINIGFPNAYDRAHGYTGKYLMIHGACV-------SVGCYAMTDA 121 P + LA +PN +D+ TG + +H S GC + + Sbjct: 106 RLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRND 165 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYP----FRMTDANMQRHRNSPNYDFWKQLKPGYD 175 I ++ +++ + I+ ++ + +R S + W+Q D Sbjct: 166 VIKKLADYIKLG------ETPILIFDHVNYVSKSEHDKRRQDLSRFVESWRQAWENQD 217 >gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100] Length = 209 Score = 109 bits (272), Expect = 6e-23 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 34/160 (21%) Query: 1 PVSKEL--KQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG 53 P +KE K + +P+ ++ + K+ R L + + Q++ +Y + G Sbjct: 50 PRAKEFAEKARWDHAPISQKLDFVLVDKKRRMLHVMR-----HGQVLATYAVALGGNPQG 104 Query: 54 PKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIH 107 K+ EGD ++PEG Y + S Y+L + I +PNA D A G ++IH Sbjct: 105 HKKNEGDQRTPEGRYFFDLKKAK--SEYHLGLRINYPNARDLAEAKKNGIKNPGDSILIH 162 Query: 108 GAC--------------VSVGCYAMTDAQIDEIFAFVRDA 133 G + GC A+ + +I+EI+A + Sbjct: 163 GLPNSWVKRKVIRHPRDWTKGCMAVRNYEIEEIYANMELG 202 >gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 172 Score = 108 bits (271), Expect = 7e-23 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 21/149 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + Q +P I + ER+L L YP+ G G R E Sbjct: 26 RPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRAL-----RYPVGVGRAGKQWSGAARIE 80 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP-NAYDRAHGY--TGKYLMIHGAC----- 110 G +++P + + NP R I G P N A G IHG Sbjct: 81 GKYRNPAWAPPAEVKRDNP--RIADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSI 138 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M +A ID+++ V Sbjct: 139 GRFVSYGCIRMYNADIDDLYRRVSVGTPV 167 >gi|15074524|emb|CAC46170.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti] Length = 193 Score = 107 bits (269), Expect = 1e-22 Identities = 28/158 (17%), Positives = 46/158 (29%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P + + G SP I + EER L + Y I G G Sbjct: 41 PRYRRQEVAYYGGESPGTIVVNTEERYLYYVQGGGSAV-----RYGIGVGEEGRTLKGRA 95 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYT-----GKYLMIHGA 109 + + P + + P +Y ++ G N A Y +HG Sbjct: 96 KIGRKAEWPSWTPTANMIRRKPHLAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGT 155 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC +T+ I ++++ Sbjct: 156 NEPWTIGQAVSSGCIRLTNDDIVDLYSRTPVGATVLII 193 >ErfK_YbiS_YhnG_Q89E55_71-202_PF03734.4 Length = 132 Score = 107 bits (269), Expect = 1e-22 Identities = 30/137 (21%), Positives = 45/137 (32%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ER+L L Y I G G R + P+ Sbjct: 1 YAPGTIVVNTSERRLYLVLQNGQAL-----RYGIGVGRDGFRWGGVHRITAKKEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 Q PD ++ I N Y G L IHG+ VS GC+ MT Sbjct: 56 PSQMLARRPDLPRHMKGGIE--NPLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMT 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + ++++ V Sbjct: 114 NDDVSDLYSRVSVGTTV 130 >gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 158 Score = 107 bits (269), Expect = 1e-22 Identities = 27/136 (19%), Positives = 39/136 (28%), Gaps = 18/136 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 +P I + ER+L L YP+ G G +G + P+ Sbjct: 25 APGSIVVSTSERRLYLVNGDGTAI-----RYPVAVGKPGKQWSGATEIDGKYYQPDWSPP 79 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTD 120 + + NP L N A G IHG S GC M + Sbjct: 80 REVKRDNPRLP-NLIRGGSPSNPMGAAAMTLRGGEYAIHGTNRPSSIGTYASYGCIRMYN 138 Query: 121 AQIDEIFAFVRDAFVG 136 I ++ V Sbjct: 139 QDITDLIERVSVGTQV 154 >gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesorhizobium loti MAFF303099] Length = 243 Score = 107 bits (269), Expect = 1e-22 Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + +E+ P P I I + L L + + Y + G G + Sbjct: 97 LPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNGKA-----RRYGVGTGKPGFEWSGTHKIT 151 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGK-YLMIHGAC----- 110 + P+ Q + YL + G N Y G IHG Sbjct: 152 NKREWPDWRPPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTI 211 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V Sbjct: 212 GGAVSSGCIRMRNEDVVDLYERVNVGTTVEVI 243 >ErfK_YbiS_YhnG_Q8FX96_108-243_PF03734.4 Length = 136 Score = 107 bits (268), Expect = 1e-22 Identities = 24/141 (17%), Positives = 38/141 (26%), Gaps = 23/141 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK-------RREGDFQSP 64 P I I R L L +A + Y + G K + E +P Sbjct: 1 EKPGTIVIDTASRFLYLVQADGKA-----RRYGVGVGKQGFSWKGTQRISRKAEWPTWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGC 115 + + + I N Y G L IHG +S GC Sbjct: 56 PSEMIARERKKGRFLPARMDGGIN--NPLGARALYLGSTLYRIHGTNQPWTIGKAMSSGC 113 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 M + + +++ Sbjct: 114 IRMRNEDVTDLYERTPVGTRV 134 >gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 309 Score = 107 bits (267), Expect = 2e-22 Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 46/187 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS-VQPNQL 75 I I E +L + ++ + P+ G ++P + + V+ + Sbjct: 102 ILINIAEMRLFYFPKN----FEKVVVLPVGIGEIGK---------ETPSKWKTYVKRKKY 148 Query: 76 NPDS-------RYYLAINIG----FP----NAYDRAHGYTGKYLMIHGAC--------VS 112 P + Y ++ I +P N Y IHG V+ Sbjct: 149 APTWTPTKDMHKEYSSLGIKLLKIYPSGKNNPMGLYALYLEDLYAIHGTNTNFGIGLRVT 208 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKP 172 GC + + I +F V + V ++T + + + + L Sbjct: 209 HGCIRLRNDDIKYLFNNVPVGTEVYFINEPV-----KVTHES----DGNKYIEVHQPLSE 259 Query: 173 GYDYFEQ 179 Sbjct: 260 NLKELNS 266 >gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 300 Score = 107 bits (267), Expect = 2e-22 Identities = 32/152 (21%), Positives = 44/152 (28%), Gaps = 32/152 (21%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P + + E +L I S+P+ S G ++P G Y V Sbjct: 102 PGRLVVNLSELRLYFVPEGGTPR---IVSFPVGTGSEGK---------ETPLGVYRVTEK 149 Query: 74 QLNPDSRYYLAI-----------NIGFPNAYDRAHGY-TGKYLMIHGAC--------VSV 113 + NP L+I G N T LMIHG VS Sbjct: 150 RANPAWHVPLSIRQERPRLPAVVPPGPDNPLGSHALRLTDDGLMIHGTNRPWGVGRNVSH 209 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + I +F V V + Sbjct: 210 GCIRLYPEDIPVLFRLVSLGTPVAIVREPVKV 241 >ErfK_YbiS_YhnG_Q89DB0_182-313_PF03734.4 Length = 132 Score = 107 bits (267), Expect = 2e-22 Identities = 25/137 (18%), Positives = 38/137 (27%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 S I + + L L + Y I G G K + P+ Sbjct: 1 ESAGTIVVDTPNKFLYLVEGNGRAM-----RYGIGVGRPGFTWSGVKAITAKREWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG--------ACVSVGCYAMT 119 + PD ++ N Y G L IHG VS GC M Sbjct: 56 PAEMIARRPDLPRHMEGGPE--NPLGARAMYLGSTLYRIHGSNEPWTIGTNVSSGCIRMR 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + +++ V Sbjct: 114 NEDVIDLYGRVNVGTRV 130 >DUF949_Q83XL8_75-191_PF06104.2 Length = 117 Score = 106 bits (265), Expect = 3e-22 Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS 79 FK ERK+ELW E+ I YP+ +SG LGPK RE D Q PEG Y + NP S Sbjct: 1 FKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVN--FNPFS 58 Query: 80 RYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +L++ I +PN++DR GY G + IHG +SVGC A+ D ID++F R Sbjct: 59 SMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILARR 117 >gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct] Length = 324 Score = 106 bits (265), Expect = 3e-22 Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 37/156 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG + I E +L + ++ +YP+ G G SP + Sbjct: 92 PGPREGVVINLAEYRLYYYPKGQN----VVHTYPLGIGREGWG---------SPIANTRI 138 Query: 71 QPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV--- 111 +P +I G N G +IHG+ Sbjct: 139 TAKTKDPAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGYLIHGSNKKFG 198 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ M +A + +F+ + + Sbjct: 199 IGTRTSHGCFRMYNADVTHLFSMISVGTSVRIINEP 234 >gi|37676018|ref|NP_936414.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 305 Score = 106 bits (265), Expect = 4e-22 Identities = 31/162 (19%), Positives = 51/162 (31%), Gaps = 41/162 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ ++G + +P+ G +PE S++ + N Sbjct: 98 IVINLAELRLYYFEPELGK----VHVFPVGIGRVG---------RDTPEMVTSIREKRPN 144 Query: 77 PDS-------RYYLAINIGFP--------NAYD---RAHGYTGKYLMIHGAC-------- 110 P + Y I P N Y +IHG Sbjct: 145 PTWTPPASIRKEYREKGIELPKIIPAGPDNPLGEYALRLAYGSGDYLIHGTNKDFGIGLR 204 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI--YPFRM 150 VS GC M I+ +F+ V + V + P R+ Sbjct: 205 VSAGCIRMEPKDIEWLFSQVDKGQRVKIINQPVKVSLEPGRI 246 >gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Brucella suis 1330] Length = 237 Score = 106 bits (265), Expect = 4e-22 Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 24/155 (15%) Query: 1 PVSKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P + G P I I ++R L L + + Y I GL G Sbjct: 85 PKFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTA-----RRYGIAVGKQGLEFQGKAT 139 Query: 57 REGDFQSPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA 109 + P + + + +P R+ ++ G N Y Y+ IHG Sbjct: 140 ISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGT 199 Query: 110 --CV------SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC+ M + + +++ V Sbjct: 200 VQPWTIGSSASNGCFRMINEDVMDLYDRVTLGTEV 234 >ErfK_YbiS_YhnG_Q6NAN8_135-266_PF03734.4 Length = 132 Score = 106 bits (264), Expect = 4e-22 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I + L L + Y + G G K + P Sbjct: 1 EKAGTIVIDTPNKFLYLVQGDGKAL-----RYGVGVGRPGFTWSGVKTITAKREWPAWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHG--------ACVSVGCYAMT 119 + PD ++ N Y G L IHG VS GC M Sbjct: 56 PKEMLARRPDLPRHMEGGPA--NPLGARAMYLGSSLYRIHGSNEPWTIGTNVSSGCIRMR 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + +++ V Sbjct: 114 NEDVIDLYGRVGVGTKV 130 >gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 321 Score = 106 bits (264), Expect = 5e-22 Identities = 28/156 (17%), Positives = 42/156 (26%), Gaps = 37/156 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E ++ + ++ +YP+ G G SP G V Sbjct: 94 PGPREGIVINLAEYRMYYYPKGQN----VVHTYPLGVGREGWG---------SPIGVTKV 140 Query: 71 QPNQLNPDSRYYLAI---------------NIGFPNAYDRAH-GYTGKYLMIHGACV--- 111 NP +I G N G +IHG+ Sbjct: 141 TAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFG 200 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ M + + E+ S Sbjct: 201 IGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEP 236 >gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens] Length = 244 Score = 105 bits (263), Expect = 6e-22 Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 38/165 (23%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P + I E +L + ++ +YP+ G ++ Sbjct: 86 PSRFILPNVPRKGVVINLAEYRLYYFPPDDN----VVMTYPVGIGKKGW---------ET 132 Query: 64 PEGFYSVQPNQLNPDSRYYL---------------AINIGFPNAYDRAHGYTG-KYLMIH 107 P G + ++NP R + G N + G ++IH Sbjct: 133 PLGLSRIISKEINPTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQHVLRLGWPAILIH 192 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 G+ VS GC M I+ +++ V + + Sbjct: 193 GSNRVDGIGAKVSAGCIRMLPDDIEHLYSLVSVGTPVRIINAPLQ 237 >gi|71674299|ref|ZP_00672046.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 216 Score = 105 bits (263), Expect = 6e-22 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 29/149 (19%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 ++ V + + ER++ +++ + + + SYP+ G + Sbjct: 78 FQKYLGIKAEELVRVVLRIGERRVYVYEGE-----KEVASYPVAVGKPGW---------E 123 Query: 63 SPEGFYSVQPNQLNPDS--RYYLAINIGFPN-----AYDRAHGYTGKYLMIHGAC----- 110 +P+G + V NP + + PN + + HG Sbjct: 124 TPKGNFKVIQMVENPKWQNPWTGEVMPAGPNTALGLRWIGFWTDGKDSIGFHGTPTVGSI 183 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V+ Sbjct: 184 GSAASHGCVRMYNEDVIKLFQKVQVGTEV 212 >gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 193 Score = 105 bits (263), Expect = 6e-22 Identities = 34/142 (23%), Positives = 49/142 (34%), Gaps = 22/142 (15%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P+ +E G +P I I ER+L L + Y I G G Sbjct: 48 PIPRET-VMFEGNYAPGTIVISTRERRLYLVQGDGTAL-----RYGIGVGRDGFRWSGTH 101 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC---- 110 R + P Q + PD Y+A N Y G L IHG+ Sbjct: 102 RITAKREWPGWTPPAQMLRRRPDLPRYMAGGED--NPLGARAMYLGSTLYRIHGSNEPET 159 Query: 111 ----VSVGCYAMTDAQIDEIFA 128 VS GC+ MT+ + +++ Sbjct: 160 IGQAVSSGCFRMTNDDVKDLYD 181 >gi|68004185|ref|ZP_00536684.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 481 Score = 105 bits (262), Expect = 8e-22 Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 34/167 (20%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I I +R L ++ ++ + + + D+ +P G + + Sbjct: 271 DDGIVINIPDRTLYYFRN-----GEVDRVLSVAVGKPKPVNDPEKRDWHTPTGNFRIIGK 325 Query: 74 QLNPDSRYYLAI---------------NIGFPNAYDRAHGYT-GKYLMIHGACV------ 111 +P R +I G N + T ++IH Sbjct: 326 VKDPTWRVPPSIRKEMKERGKEVKTIVPPGKKNPLGKYALKTSIPGILIHSTNAPESVYS 385 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQ 156 S GC + +++ F V + G + P +MT A Q Sbjct: 386 FSSHGCIRVFPEFMEDFFNSVTEETTGE-----IIYEPVKMTVAEGQ 427 >gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 332 Score = 105 bits (262), Expect = 9e-22 Identities = 25/134 (18%), Positives = 40/134 (29%), Gaps = 33/134 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I I RKL L + +L+K YP+ +P G + V L Sbjct: 144 LIEIDVASRKLVL-----TEDGKLVKEYPVAVGKSKT---------PTPLGEWKVVHKGL 189 Query: 76 NPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEI 126 N + + + + P IHG S GC M + ++E+ Sbjct: 190 NWGNGFGTRWMGLNVP----------WGIYGIHGTNKPGSIGSYASHGCIRMFNRHVEEL 239 Query: 127 FAFVRDAFVGGQPS 140 + V Sbjct: 240 YPLVPAGTRVRIVE 253 >gi|68192907|gb|EAN07560.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 196 Score = 105 bits (262), Expect = 9e-22 Identities = 24/158 (15%), Positives = 42/158 (26%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P + + G P I + ++ER L + Y + G G Sbjct: 44 PQFRRQRVPYAGGEKPGTIIVNRDERFLYYVEGDGWAT-----RYGVGVGKEGRTLSGRA 98 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA 109 + P + + P +Y ++ G N Y +HG Sbjct: 99 VVGRKAEWPSWTPTANMMRREPRYLQYAGGVSGGPHNPLGARALYLYRNGRDTMYRLHGT 158 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC + + I ++ V Sbjct: 159 NEPWSIGQAVSSGCIRLLNDDIIHLYERVPVGTAVMII 196 >gi|67153406|ref|ZP_00415151.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 317 Score = 104 bits (261), Expect = 1e-21 Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 37/156 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E ++ + ++ +YP+ G G SP + Sbjct: 90 PGPREGIIINLAEYRMYYFPKDQN----VVHTYPLGIGREGWG---------SPVAETRI 136 Query: 71 QPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC---- 110 +P +I G N G +IHG+ Sbjct: 137 TGKIKDPAWYPPKSIREEHAADGDPLPTVVPAGPDNPLGPFKFTLGLSGYLIHGSNKKFG 196 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 VS GC+ M + + ++ V + Sbjct: 197 IGMRVSHGCFRMLNHNVLQLADMVPVGTKVRIINEP 232 >gi|71674300|ref|ZP_00672047.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 219 Score = 104 bits (261), Expect = 1e-21 Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 29/146 (19%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 P + + I +R++ ++K QL SYPI G ++P Sbjct: 84 KLYIKPNETISLVIKLSDRRVYVYKND-----QLKTSYPIAIGKEGW---------ETPT 129 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNA-------YDRAHGYTGKYLMIHGAC-------- 110 G + V NP + I P + Y+ HG Sbjct: 130 GTHKVIQKIPNPSWTHPFTGEIIPPGPENPLGERWIGFWTDGTNYIGFHGTPNEETVGQA 189 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V + Sbjct: 190 ASHGCVRMFNQDVLDLFEKVTIGTIV 215 >gi|15073711|emb|CAC45353.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 246 Score = 104 bits (261), Expect = 1e-21 Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + + P I I R L L + Y + G G R Sbjct: 100 LPQMIAYETKEKPGTIVIDTNNRFLYLVTGNGEA-----RRYGVGVGKPGFEWAGEHRIT 154 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYLM-IHGAC----- 110 + P + +YL ++ G N Y G L IHG Sbjct: 155 RKAEWPNWTPPQEMIAREAARGHYLPARMDGGPENPLGARAMYLGSTLYRIHGTNAPWTI 214 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V+ Sbjct: 215 GYGVSSGCIRMRNEDVVDLYERVKVGTKVIVI 246 >gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] Length = 325 Score = 104 bits (261), Expect = 1e-21 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 14/134 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + K ++ L ++ G Q + I +G K+ EGD ++P GFY Sbjct: 61 YDDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQKAIITG--LMGDKQVEGDLKTPVGFYE 118 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + NP YY A +PN D+ G TG + IHG + GC A+ Sbjct: 119 LGRK-FNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIAL 177 Query: 119 TDAQIDEIFAFVRD 132 + ++E V+D Sbjct: 178 FNENLEEFAKVVQD 191 >gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted protein, putative [Campylobacter lari RM2100] Length = 323 Score = 104 bits (261), Expect = 1e-21 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 31/201 (15%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ + ++ G + + G K EGD ++P GFY Sbjct: 60 YEENVAIVLTNKSDKIIRVYHYNDGKVEKKFIQKDVLTG--LAGDKEIEGDLKTPIGFYE 117 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + + P YY A +PN D+ G TG + IHG + GC A+ Sbjct: 118 L-GKKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAV 176 Query: 119 TDAQIDEI---------FAFVRDAFVGGQPSVQVSIYPFRMTD--ANMQRHRNSPNYDFW 167 + +++ +A + +V+I + + Q+ S F+ Sbjct: 177 QNDLLEDFNKLVADRKSYAMTEEKNKVRANHEEVAILLANLFAWKDSWQKSDISKYLSFY 236 Query: 168 KQL------KPGYDYFEQTRK 182 Q K Y+ F + ++ Sbjct: 237 DQKIFKHNNKFSYEQFAKNKQ 257 >gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 104 bits (260), Expect = 1e-21 Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 27/165 (16%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 S+ + LP P+ I I ++++ L+ LI + G Sbjct: 65 SETAPEPLPKGPLQIIISIADQRVSLFDN-----GALIARSSVSTGMEG---------HP 110 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYA 117 +P G +SV Q S Y A + + + +H G S GC Sbjct: 111 TPLGVFSVISKQRWHRSNIYSAAPMPYMQRITW------SGIALHAGVVPGHPASHGCIR 164 Query: 118 MTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP 162 + ++ + V P +T+ ++ + + S Sbjct: 165 LKSDFAVRLWHLTKRGTRVIIAHGDVQ--PVEITNPHLFQAKASS 207 >gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 239 Score = 104 bits (259), Expect = 2e-21 Identities = 25/143 (17%), Positives = 41/143 (28%), Gaps = 19/143 (13%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQ 62 + Q +P I + L Y I G G K + Sbjct: 86 VAYQTREAPGTIVVDTPNTYLYYVLGGGRAI-----RYGIGVGRDGFTWSGVKSVARKAE 140 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSV 113 P+ + P ++A G N Y G + IHG VS Sbjct: 141 WPDWTPPPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTVYRIHGTNAPSTIGTHVSS 198 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC +T+ + ++++ V Sbjct: 199 GCIRLTNEDVKDLYSRVAVGAKV 221 >gi|15074019|emb|CAC45666.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 201 Score = 104 bits (259), Expect = 2e-21 Identities = 29/156 (18%), Positives = 43/156 (27%), Gaps = 25/156 (16%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + P + I E R L L + Y I GL G Sbjct: 22 PRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGGMAL-----RYGIGVGKAGLEFEGEA 76 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGF-------PNAYDRAHGYTGKYLMIHG 108 R + P + P+ LA + P A G IHG Sbjct: 77 RVGRKAEWPRWTPTSDMVAREPERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHG 136 Query: 109 A--------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC + + I ++++ V + Sbjct: 137 TTEAWSIGKAVSSGCIRLFNPDIIDLYSRVPEGSRV 172 >gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9] Length = 301 Score = 103 bits (258), Expect = 2e-21 Identities = 30/205 (14%), Positives = 49/205 (23%), Gaps = 49/205 (23%) Query: 5 ELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 K LP I I E +L + + ++ +PI G + Sbjct: 81 PTKVILPNVKRKGIIINLAELRLYYFPED---DKSIVYIFPIGIGRVG---------RAT 128 Query: 64 PEGFYSVQPNQLNPDSRYY-------------------LAINIGFPNAYDRAHGYTGKYL 104 P V NP A Y Y+ Sbjct: 129 PNMITKVSQKIENPTWTPTANIRKEYREKKDIELPAVVPAGPENPLGEYAMRLAYSRGEY 188 Query: 105 MIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQ 156 +IHG VS GC M I+ +F V + + Sbjct: 189 LIHGTNKDFGIGMRVSSGCIRMNPWDIEWLFPQVPRGTSVQIINQPLK---------QSV 239 Query: 157 RHRNSPNYDFWKQLKPGYDYFEQTR 181 + + + L + Q++ Sbjct: 240 EPDGALYVEVHQPLSKSDEQVGQSK 264 >ErfK_YbiS_YhnG_Q89BG8_76-215_PF03734.4 Length = 140 Score = 103 bits (258), Expect = 2e-21 Identities = 25/143 (17%), Positives = 38/143 (26%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I +L L + Y I GL G + P Sbjct: 1 EPVGTIVIDTAAHQLYLVEGDGKAM-----RYGIGVGKDGLAFAGTATIRRKAEWPHWTP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY-----TGKYLMIHGA--------CVSV 113 + P +LA + G N Y IHG VS Sbjct: 56 TKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC + + I ++++ V+ Sbjct: 116 GCIRLINQDIIDLYSRVKIGSRV 138 >gi|15155625|gb|AAK86477.1| AGR_C_1197p [Agrobacterium tumefaciens str. C58] Length = 275 Score = 103 bits (258), Expect = 3e-21 Identities = 28/152 (18%), Positives = 41/152 (26%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + Q P I I R L L A + Y + G G + Sbjct: 129 LPQIVSYQTAEKPGTIVIDTPNRFLYLVLADGKA-----RRYGVGVGKPGFEWAGTHKVT 183 Query: 59 GDFQSPEGFYSVQPNQLNPD-SRYYLAINIGFP-NAYDRAHGYTGKYLM-IHGAC----- 110 + P + Y A G P N Y G L IHG Sbjct: 184 RKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTI 243 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ V Sbjct: 244 GSNNSSGCIRMRNEDVTDLYERVNVGTRVIVI 275 >gi|75818411|ref|ZP_00748578.1| COG1376: Uncharacterized protein conserved in bacteria [Vibrio cholerae V51] Length = 306 Score = 103 bits (257), Expect = 3e-21 Identities = 31/206 (15%), Positives = 52/206 (25%), Gaps = 53/206 (25%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K G I I E +L ++ G + +P+ G +P Sbjct: 88 PKVAYEG----IVINLAELRLYYFRPNEGK----VHIFPVGIGRIG---------RDTPV 130 Query: 66 GFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAHG---YTGKYLMIH 107 S+ + P + Y A I P N Y +IH Sbjct: 131 MQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIH 190 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G VS GC M I+ ++ V + + + Sbjct: 191 GTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVA---------LEPD 241 Query: 160 NSPNYDFWKQLKPGYDYFEQTRKPPT 185 S + + L ++ P Sbjct: 242 RSVFIEVHEPLTRSNG-VKKNLVVPK 266 >gi|69929997|ref|ZP_00626874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 199 Score = 102 bits (256), Expect = 4e-21 Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 19/149 (12%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ--- 62 + + P I I ER L L + Y I G + + Sbjct: 56 VLYRTTEPPGTIIIQTAERHLYLIQGNGRAI-----RYGIGVGREGFQWQGILNITRKAE 110 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSV 113 P+ + + P ++A G N Y G + IHG +S Sbjct: 111 WPDWTPPPEMIKRQPYLPRFMAGGPG--NPLGARAMYLGTTVYRIHGTNRPDTIGTAISS 168 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 GC+ + +A + +++ V Sbjct: 169 GCFRLVNADVADLYDRVPVGTRVIVRQKP 197 >gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 315 Score = 102 bits (255), Expect = 5e-21 Identities = 29/193 (15%), Positives = 49/193 (25%), Gaps = 46/193 (23%) Query: 7 KQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + K L PI + +P Sbjct: 90 QLILPNTPHSGIVINNAEMRLYYYPEKKNTVIVL----PIAIGTI---------KNATPS 136 Query: 66 GFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIHGAC 110 + + ++ P ++ G N Y K IHG Sbjct: 137 HWITSITHKKKPIWIPTKSMRDEYIKHGEILPTIFPAGSSNPMGLYALYLEKNYAIHGTN 196 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP 162 ++ GC + I+ +F V + V + T Sbjct: 197 RNFGIGLRITRGCIRLRPEDIEYLFNIVPVGTKVQFINEPV-----KSTVEK----NGMR 247 Query: 163 NYDFWKQLKPGYD 175 + L D Sbjct: 248 YLEIHNPLSCNKD 260 >gi|49239475|emb|CAF25827.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 258 Score = 102 bits (255), Expect = 5e-21 Identities = 27/156 (17%), Positives = 46/156 (29%), Gaps = 25/156 (16%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + SP + I +E L L G + ++ Y I GL G Sbjct: 75 PKFWRQQVIYYTSYSPGTLVIDTQECFLYLI----GENGKALR-YGIGVGKEGLAFEGEG 129 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY-----TGKYLMIHG 108 + + P + P+ +L + G N Y IHG Sbjct: 130 TVQRKRRWPSWAPTAAMMAREPERYGHLGKGMPPGPDNPLGARALYLFRNGKDTLFRIHG 189 Query: 109 ACVS--------VGCYAMTDAQIDEIFAFVRDAFVG 136 + S GC + + I +++ V + Sbjct: 190 SNESWSIGRAISSGCIRLLNQDIIDLYDRVPNGARV 225 >gi|17936219|ref|NP_533009.1| hypothetical protein Atu2336 [Agrobacterium tumefaciens str. C58] Length = 205 Score = 102 bits (255), Expect = 5e-21 Identities = 20/150 (13%), Positives = 43/150 (28%), Gaps = 22/150 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 +E+ + + R+L + Y + GL G Sbjct: 56 QEVTYDTSHPAGTVVVDTPARRLYYVMGEGRAM-----RYGVGVGRQGLALKGDAYIGRK 110 Query: 61 FQSPEGFYSVQPNQLNP-DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC---- 110 + P + + +P + ++ + G N Y + +HG Sbjct: 111 SEWPSWTPTANMMRRDPRNLKFAGGMPGGPNNPLGARALYLYRGGNDTMFRLHGTNQPQS 170 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC M + I ++++ V Sbjct: 171 IGHAMSSGCIRMLNHDIIDLYSRVPVGSRV 200 >gi|71836515|ref|ZP_00676284.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 471 Score = 102 bits (255), Expect = 5e-21 Identities = 31/152 (20%), Positives = 46/152 (30%), Gaps = 32/152 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +R L +K E +L S P+ G D+ +P G + V Q + Sbjct: 266 IVINIPDRTLYYFK-----EGKLTTSLPVALGQPQKGATY---DWMTPTGKFRVVAKQTD 317 Query: 77 PDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC--------VS 112 P +I G N + T ++IH S Sbjct: 318 PTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHSTTRPGSIYRFAS 377 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 GC + Q+ + F VR G V Sbjct: 378 HGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVK 409 >gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88] Length = 232 Score = 102 bits (255), Expect = 6e-21 Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 48/166 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + + I+ YPI + SP G + + N Sbjct: 42 ILVDISEFKMYLIEKGSN---KPIRRYPIAGGKP---------ETPSPYGTWKITSKSAN 89 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P IHG S GC M + ++E++ Sbjct: 90 WGSGFGTRWMGLNVP----------WGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELY 139 Query: 128 AFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPG 173 +V + P+ ++ ++ ++ LKPG Sbjct: 140 KYVDVGTIVVIYG-----GPYNLS------------WNNFRTLKPG 168 >gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 325 Score = 102 bits (254), Expect = 6e-21 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 14/148 (9%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ L ++ + G + + I +G K+ EGD ++P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITG--LMGDKKIEGDLKTPVGFYE 118 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + NP YY A +PN D+ G TG + IHG + GC A+ Sbjct: 119 LGRK-FNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 + +++ V+D V + I Sbjct: 178 FNNNLEKFAKVVQDKKVFVMTEEKEKIR 205 >gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobium japonicum USDA 110] Length = 262 Score = 102 bits (254), Expect = 6e-21 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 21/149 (14%) Query: 2 VSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 + +P I I L Y I G + Sbjct: 104 RFRRQTVSYATREAPGTIIIDTPNTYLYYVLGNGQAV-----RYGIGVGRDGFTWSGVQS 158 Query: 60 ---DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC----- 110 + P+ + P ++A G N Y G + IHG Sbjct: 159 VTKKAEWPDWTPPPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTIYRIHGTNAPDTI 216 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC +T+ + ++++ V Sbjct: 217 GKHVSSGCIRLTNDDVTDLYSRVNVGTKV 245 >gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 340 Score = 102 bits (254), Expect = 6e-21 Identities = 34/216 (15%), Positives = 54/216 (25%), Gaps = 52/216 (24%) Query: 8 QQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 Q L I + E +L + + YPI G +P Sbjct: 88 QMLLPDTPREGIVVNLAELRLYYYPKGKNT----VIVYPIGIGQLG---------RNTPL 134 Query: 66 GFYSVQPNQLNPDSRYYLAI----------------NIGFPNAYDRAHGYT---GKYLMI 106 SV + NP I G N G ++ Sbjct: 135 MTTSVSEKRENPTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGLHALRLSAHGGVYLL 194 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 HG VS GC + I +F V + + + + Sbjct: 195 HGTNADFGIGMRVSSGCIRLRPDDIKALFDNVPVGTRVQILNDAI-----KTSVE----P 245 Query: 159 RNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYV 194 + + L QT K P ++V ++V Sbjct: 246 DGKRYVEVHQPLSKTDKDDPQTMKIP-LTVKTQKFV 280 >gi|67916612|ref|ZP_00510315.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 255 Score = 102 bits (254), Expect = 6e-21 Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 36/144 (25%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 YI I +E KL L+K + L+K+YP+ + SPEG + + Sbjct: 59 YYIYINLDELKLYLYK-----DGVLLKTYPVSGGKP---------ETPSPEGTWKIISKS 104 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA---------CVSVGCYAMTDAQIDE 125 + + + P IHG S GC M + E Sbjct: 105 DWGGNFGGSWMGLNVP----------WGQYGIHGTKYPWYIGRQNASHGCIRMYNKNAKE 154 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFR 149 ++ V + PF+ Sbjct: 155 LYDIVPYGTIVTIVH---KNRPFK 175 >gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 102 bits (254), Expect = 6e-21 Identities = 27/143 (18%), Positives = 42/143 (29%), Gaps = 19/143 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I I ER L L + Y I G G + P+ Sbjct: 60 ETPGTIIISTAERHLYLVQPGGRAI-----RYGIGVGRDGFQWQGLVNITNKKEWPDWTP 114 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + Q P ++A G N Y G + IHG VS GC+ + Sbjct: 115 PPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGTTVYRIHGTNRPDTIGTKVSSGCFRLV 172 Query: 120 DAQIDEIFAFVRDAFVGGQPSVQ 142 + + +++ V Sbjct: 173 NNDVADLYDRVPVGTKVVIRQKP 195 >ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 Length = 140 Score = 102 bits (254), Expect = 7e-21 Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK--RREGDFQ-SPEGFY 68 P I I R+L L + + + Y I GL K GD Q P Sbjct: 1 YEPGTIVIDTSARRLYLVE-----SFSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIP 55 Query: 69 SVQPNQLNPD--SRYYLAINIGFPNAYDRAH-----GYTGKYLMIHGA--------CVSV 113 ++ + P +Y + G N G +L IHG S Sbjct: 56 TLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASN 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC+ M + + ++++ VR Sbjct: 116 GCFRMINEHVMDLYSRVRVGTKVVI 140 >ErfK_YbiS_YhnG_Q8UHL1_122-257_PF03734.4 Length = 136 Score = 101 bits (253), Expect = 1e-20 Identities = 27/139 (19%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I R L L A + Y + G G + + P Sbjct: 1 EKPGTIVIDTPNRFLYLVLADGKA-----RRYGVGVGKPGFEWAGTHKVTRKAEWPSWTP 55 Query: 69 SVQPNQLNPD-SRYYLAINIGFP-NAYDRAHGYTGKYLM-IHGAC--------VSVGCYA 117 + Y A G P N Y G L IHG S GC Sbjct: 56 PKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVG 136 M + + +++ V Sbjct: 116 MRNEDVTDLYERVNVGTRV 134 >ErfK_YbiS_YhnG_Q92PX9_54-192_PF03734.4 Length = 139 Score = 101 bits (252), Expect = 1e-20 Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 SP I + EER L + Y I G G + + P Sbjct: 1 ESPGTIVVNTEERYLYYVQGGGSAV-----RYGIGVGEEGRTLKGRAKIGRKAEWPSWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC--------VSVG 114 + + P +Y ++ G N A Y +HG VS G Sbjct: 56 TANMIRRKPHLAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQAVSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C +T+ I ++++ Sbjct: 116 CIRLTNDDIVDLYSRTPVGATVLI 139 >gi|23129994|ref|ZP_00111815.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 351 Score = 101 bits (252), Expect = 1e-20 Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 29/153 (18%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + +L + + +R+ ++ ++I SYPI G + Sbjct: 213 APSASDRLADRKTQVVVDLSDRRTYVYAGD-----EVIASYPIAVGKKGW---------E 258 Query: 63 SPEGFYSVQPNQLNPDSRYYLAI-----NIGFP--NAYDRAHGYTGKYLMIHGAC----- 110 +P G + V + P R+ + P + + + HG Sbjct: 259 TPTGSFQVIHMRHYPIWRHPITGKVFQAGTDSPLGDRWIGFWSDGRNEIGFHGTPDIDLV 318 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC M ++ + ++ V + Sbjct: 319 GTAVSHGCLRMRNSDVRMLYEQVSIGTTVLVRN 351 >ErfK_YbiS_YhnG_Q82U48_98-240_PF03734.4 Length = 143 Score = 101 bits (252), Expect = 1e-20 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 34/150 (22%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 + + I E +L + G+ I ++P+ D+ +P G ++ Sbjct: 3 RIGLVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---------DWNTPLGRTTIVRK 53 Query: 74 QLNPDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMIHGAC------ 110 Q +P ++ G N R Y G +IH Sbjct: 54 QKDPTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYALYLGLPGYLIHSTNKPFGVG 113 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 V+ GC + I+E+F V Sbjct: 114 MRVTHGCMRLYPEDIEELFNLVPTGTPVQI 143 >ErfK_YbiS_YhnG_Q92KL8_110-245_PF03734.4 Length = 136 Score = 101 bits (252), Expect = 1e-20 Identities = 27/139 (19%), Positives = 40/139 (28%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I R L L + Y + G G R + P Sbjct: 1 EKPGTIVIDTNNRFLYLVTGNGEA-----RRYGVGVGKPGFEWAGEHRITRKAEWPNWTP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYA 117 + +YL ++ G N Y G L IHG VS GC Sbjct: 56 PQEMIAREAARGHYLPARMDGGPENPLGARAMYLGSTLYRIHGTNAPWTIGYGVSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVG 136 M + + +++ V+ Sbjct: 116 MRNEDVVDLYERVKVGTKV 134 >ErfK_YbiS_YhnG_Q6N3X7_92-223_PF03734.4 Length = 132 Score = 101 bits (252), Expect = 1e-20 Identities = 24/137 (17%), Positives = 39/137 (28%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + L Y I G G K + P+ Sbjct: 1 EAPGTIVVDTPNTYLYYVLGGGRAI-----RYGIGVGRDGFTWSGVKSVARKAEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + P ++A G N Y G + IHG VS GC +T Sbjct: 56 PPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTVYRIHGTNAPSTIGTHVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + ++++ V Sbjct: 114 NEDVKDLYSRVAVGAKV 130 >ErfK_YbiS_YhnG_Q89WV4_37-169_PF03734.4 Length = 133 Score = 101 bits (251), Expect = 1e-20 Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 18/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 SP I + ER+L L YP+ G G R +G +++P Sbjct: 1 YSPGTIVVKTNERRLYLILDDGHAV-----RYPVGVGKSGKQWAGTTRIDGKYRNPAWSP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGACV--------SVGCYAMT 119 + + P + N A G IHG V S GC M Sbjct: 56 PAEVKRDKPQLPDVIPGG-SPRNPMGVAAMTLAGGEYAIHGTNVPGSVGGFVSYGCIRML 114 Query: 120 DAQIDEIFAFVRDAFVG 136 + I ++++ V Sbjct: 115 NDDITDLYSRVSVGTTV 131 >gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 224 Score = 101 bits (251), Expect = 2e-20 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 46/163 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++KE+R+L + ++ L++ YPI G K R+GD ++PEG + + + Sbjct: 76 IFVYKEKRRLYVIQSN-----VLVRDYPIGLGPHPSGDKDRDGDGRTPEGDFFIIVKGSS 130 Query: 77 PDSRYYLAINIGFPNAYDRAHGY----------------------------TGKYLMIHG 108 + ++ I +P Y G + IH Sbjct: 131 ERLK--KSLAISYPGRGHAEKAYFSGVITPLEFRDILRAADNRSAPPSGTVLGGKIFIHA 188 Query: 109 ----ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + G A+ D+ ++E+F VSI P Sbjct: 189 GGAHKDWTDGSIALYDSDMEELFTVASVGT-------PVSIRP 224 >ErfK_YbiS_YhnG_Q5PG17_96-233_PF03734.4 Length = 138 Score = 100 bits (250), Expect = 2e-20 Identities = 24/146 (16%), Positives = 36/146 (24%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE-GFYSVQPNQL 75 I I E +L + L PI G +P V+ + Sbjct: 6 IIINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKD---------TPINWTTKVERKKA 52 Query: 76 NPDSRYYLAINIGF---------------PNAYDRAHGYTGKYLMIHGAC--------VS 112 P ++ + N Y G+ IHG VS Sbjct: 53 GPTWTPTAKMHTEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I +F V Sbjct: 113 HGCVRLRNDDIKFLFENVPVGTRVQF 138 >gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 196 Score = 100 bits (250), Expect = 2e-20 Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 19/149 (12%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ--- 62 + + P I I ER L L + Y I G + + Sbjct: 53 VLYRTTEPPGTIIIQTAERHLYLIQGNGRAI-----RYGIGVGRAGFQWQGILNITRKAE 107 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSV 113 P+ + P ++A G N Y G + IHG +S Sbjct: 108 WPDWTPPPEMIARQPYLPRFMAGGPG--NPMGARAMYLGTTVYRIHGTNQPDTIGTAISS 165 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 GC+ + +A + +++ + Sbjct: 166 GCFRLVNADVIDLYDRIPVGTRVIVRQKP 194 >ErfK_YbiS_YhnG_Q92R37_35-174_PF03734.4 Length = 140 Score = 100 bits (250), Expect = 2e-20 Identities = 28/143 (19%), Positives = 41/143 (28%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P + I E R L L + Y I GL G R + P Sbjct: 1 EPPGTVVIDTENRFLYLVQGGGMAL-----RYGIGVGKAGLEFEGEARVGRKAEWPRWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGF-------PNAYDRAHGYTGKYLMIHGA--------CVSV 113 + P+ LA + P A G IHG VS Sbjct: 56 TSDMVAREPERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHGTTEAWSIGKAVSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC + + I ++++ V + Sbjct: 116 GCIRLFNPDIIDLYSRVPEGSRV 138 >gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 175 Score = 100 bits (250), Expect = 2e-20 Identities = 28/138 (20%), Positives = 42/138 (30%), Gaps = 18/138 (13%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGF 67 SP I + ER+L L YP+ G G + +G F++P Sbjct: 40 DYSPGTIVVRTGERRLYLVVEPGHAV-----RYPVGVGKAGKQWAGVTKIDGKFRNPAWA 94 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGAC--------VSVGCYAM 118 + + P + N A G IHG VS GC M Sbjct: 95 PPAEVKRDVPTIPDVIPGG-SPANPMGVAAMTLAGGEYAIHGTNRPQSIGGFVSYGCIRM 153 Query: 119 TDAQIDEIFAFVRDAFVG 136 + I +++ V Sbjct: 154 LNDDITDLYERVPVGTQV 171 >gi|56413653|ref|YP_150728.1| putative LysM domain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 333 Score = 100 bits (249), Expect = 2e-20 Identities = 39/222 (17%), Positives = 56/222 (25%), Gaps = 63/222 (28%) Query: 1 PVSKE------LKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K Q L + + E +L + ++ YPI GL Sbjct: 74 PVPKPGTLITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENR----VQVYPIGIGLQGL 129 Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRYY---------------LAINIGFPNAYDRAH 97 ++P + NP I G N R Sbjct: 130 ---------ETPVMDTRIGQKIPNPMWTPTAGIRQRSLERGITLPPVIPAGPNNPLGRYA 180 Query: 98 GY---TGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV--S 144 +IHG VS GC M I +FA VR + V S Sbjct: 181 LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS 240 Query: 145 IYPFR---------MTDANMQRHRNSPNYDFWKQLKPGYDYF 177 + P ++ Q + P L + F Sbjct: 241 VEPNGIRYVEVHRPLSPEEEQNVQTMPYV-----LPAEFTAF 277 >gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Bacillus subtilis subsp. subtilis str. 168] Length = 176 Score = 100 bits (249), Expect = 2e-20 Identities = 30/154 (19%), Positives = 46/154 (29%), Gaps = 29/154 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ + LPG P I + K +L + ++ Y + D Sbjct: 14 PIWPLGENPLPGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGK---------TD 58 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC---- 110 +PEG +SV NP R N G G+ IHG Sbjct: 59 DLTPEGEFSVTVKAENPYYRKKNIEGGSPDNPLGARWIGFDAKGTDGRIYGIHGTNREES 118 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC M + ++ +F + Sbjct: 119 VGKFVSNGCIRMHNDEVVHLFQTIPVGTRVLITD 152 >gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thiobacillus denitrificans ATCC 25259] Length = 164 Score = 100 bits (249), Expect = 3e-20 Identities = 31/162 (19%), Positives = 51/162 (31%), Gaps = 44/162 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ++L LW+ G+ LI+ YP+ + G G + G + +P G + V + Sbjct: 6 IDVDIARQRLYLWERFPDGDM-LIREYPVSTAANGAG--EQSGSYCTPRGRHRVAQK-IG 61 Query: 77 PDSRYYLAI------------NIGFPNA-YDRAHGYT-------------------GKYL 104 + Y A + N D +Y+ Sbjct: 62 AGAPLYAAFKARQATGEIWTPGLDAQNPGRDWILTRILWLEGLEPGRNQGGTVDSHDRYI 121 Query: 105 MIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 IHG S GC M +A + E+F V Sbjct: 122 YIHGTNEEHRIGTPASHGCVRMKNADVAELFELVEVGTEVRI 163 >ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 Length = 137 Score = 99.9 bits (248), Expect = 3e-20 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 19/144 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S I + KE+RKL +++ + Q I YP G G K + D ++PEG Y +Q Sbjct: 2 SRYVILVDKEQRKLSVFERNG-EQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQE 59 Query: 73 NQLNPDSRY----YLAINIGFPNAYDRAHGYTGKYLMIHGACV-------SVGCYAMTDA 121 P + LA +PN +D+ TG + +H S GC + + Sbjct: 60 RLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRND 119 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSI 145 I ++ +++ + I Sbjct: 120 VIKKLADYIKLG------ETPILI 137 >ErfK_YbiS_YhnG_Q6N9D2_60-191_PF03734.4 Length = 132 Score = 99.9 bits (248), Expect = 3e-20 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 19/129 (14%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I I ER+L L + Y I G G R + P Sbjct: 1 YAPGTIVISTRERRLYLVQGDGTAL-----RYGIGVGRDGFRWSGTHRITAKREWPGWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 Q + PD Y+A N Y G L IHG+ VS GC+ MT Sbjct: 56 PAQMLRRRPDLPRYMAGGED--NPLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMT 113 Query: 120 DAQIDEIFA 128 + + +++ Sbjct: 114 NDDVKDLYD 122 >ErfK_YbiS_YhnG_Q987T4_107-242_PF03734.4 Length = 136 Score = 99.9 bits (248), Expect = 3e-20 Identities = 25/141 (17%), Positives = 39/141 (27%), Gaps = 19/141 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I + L L + + Y + G G + + P+ Sbjct: 1 QKPGTIVIDTTQNFLYLVEKNGKA-----RRYGVGTGKPGFEWSGTHKITNKREWPDWRP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGK-YLMIHGAC--------VSVGCYA 117 Q + YL + G N Y G IHG VS GC Sbjct: 56 PAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + + +++ V Sbjct: 116 MRNEDVVDLYERVNVGTTVEV 136 >gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 360 Score = 99.9 bits (248), Expect = 3e-20 Identities = 28/194 (14%), Positives = 41/194 (21%), Gaps = 50/194 (25%) Query: 6 LKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 Q L I I E +L + + YPI G + Sbjct: 85 PSQMLLPDTPRQGIVINLAELRLYYFPKGKNN----VIVYPIGIGQLG---------RNT 131 Query: 64 PEGFYSVQPNQLNPDSRYY------------------LAINIGFPNAYDRAHGYTGKYLM 105 P SV +P A A+ + Sbjct: 132 PVMTTSVSQLIKDPTWTPTKNIRKHYAEQGVILPAVVPAGPENPMGAFALRLAAGRGEYL 191 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG VS GC + I+ +F V + V Sbjct: 192 IHGTNADFGIGMRVSSGCIRLRPDDIETLFNAVPRGTRVQIINEAVKY---------SVE 242 Query: 158 HRNSPNYDFWKQLK 171 + + L Sbjct: 243 PSGKRYIEVHQPLS 256 >gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 182 Score = 99.9 bits (248), Expect = 3e-20 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 39/158 (24%) Query: 6 LKQQLPGSP----------VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 + Q P + IR+ + R++ +++ + Q++KS+PI G Sbjct: 37 QQSQSPPKIPPSKNNTTHKISIRVKRGARQVYVYQ-----DKQVLKSFPIAIGKSGW--- 88 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP---NAYDRA----HGYTGKYLMIHG 108 ++P G Y V + NP + + NI P N + Y +L HG Sbjct: 89 ------ETPLGNYQVIYMKKNPIFKNFKTGNIIMPGANNPLGKRVIVFKIYKKSHLAFHG 142 Query: 109 AC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++ V Sbjct: 143 TNQDKLIGKAVSHGCIRMLNKDVIALYELVNIGTPINV 180 >gi|67928661|ref|ZP_00521848.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 182 Score = 99.9 bits (248), Expect = 3e-20 Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 28/148 (18%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + Q I + +RKL + + ++++ + + SP Sbjct: 27 AQDQNTRPARRIVVSIPDRKLAVMEDD-----RVLRVFETAVGAPKS---------PSPT 72 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFP---NAYDRAH-GYTGKYLMIHGACV--------SV 113 G Y++ + +P Y I P N G + K IHG V S Sbjct: 73 GTYTIINSIADPTW--YTKGKIVPPGKCNPLGTRWLGLSVKGYGIHGTNVPSSIGRNASH 130 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 GC M + ++E+F V Sbjct: 131 GCIRMRNRDVEELFKMVAVGDQVELRGE 158 >ErfK_YbiS_YhnG_Q89FR3_116-247_PF03734.4 Length = 132 Score = 99.5 bits (247), Expect = 4e-20 Identities = 23/137 (16%), Positives = 38/137 (27%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG---DFQSPEGFY 68 +P I I L Y I G + + P+ Sbjct: 1 EAPGTIIIDTPNTYLYYVLGNGQAV-----RYGIGVGRDGFTWSGVQSVTKKAEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + P ++A G N Y G + IHG VS GC +T Sbjct: 56 PPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTIYRIHGTNAPDTIGKHVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + ++++ V Sbjct: 114 NDDVTDLYSRVNVGTKV 130 >gi|26989044|ref|NP_744469.1| hypothetical protein PP2320 [Pseudomonas putida KT2440] Length = 325 Score = 99.5 bits (247), Expect = 4e-20 Identities = 25/156 (16%), Positives = 42/156 (26%), Gaps = 37/156 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E ++ + ++ ++P+ G G SP + Sbjct: 94 PGPREGIVINLAEYRMYYFPKGES----VVYTFPLGIGREGWG---------SPIANTRI 140 Query: 71 QPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV--- 111 NP +I G N G +IHG+ Sbjct: 141 TAKTPNPTWTPPASIRKEHAEDGDILPTVVPAGPDNPLGPFKFTLGVPGYLIHGSNKKFG 200 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ M + + E+ V + Sbjct: 201 IGMRTSHGCFRMFNNNVLELSKMVPVGTPVRIINEP 236 >gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacillus clausii KSM-K16] Length = 165 Score = 99.5 bits (247), Expect = 4e-20 Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 35/135 (25%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + + +L L ++K YPI Q+P G + + Sbjct: 56 PYEIHVSLSQHQLTLLHN-----GSVVKIYPIAVGKMLT---------QTPTGNFVIVNK 101 Query: 74 QLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQID 124 NP + + +++ + IHG VS GC M + ++ Sbjct: 102 APNPGGPFGTMWMSLS------------KLHYGIHGTNDPSSIGKSVSHGCIRMHNKDVE 149 Query: 125 EIFAFVRDAFVGGQP 139 E+ A V Sbjct: 150 ELAATVPIGTRVRIE 164 >gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 283 Score = 99.5 bits (247), Expect = 5e-20 Identities = 24/144 (16%), Positives = 41/144 (28%), Gaps = 36/144 (25%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 K Q + I + K R+L K+YP+ + Sbjct: 83 KREGQAWEQPRISIDVVK--RRLTY------TSGSFKKTYPVAVGKPQT---------PT 125 Query: 64 PEGFYSVQPNQLNPDSRYY-LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 P G +++ +NP + + + P IHG VS G Sbjct: 126 PLGNWTIVQKTVNPGGPFGARWMRLSVP----------WGGYGIHGTNRPSSIGKAVSHG 175 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C M +A + E++ Sbjct: 176 CVRMYNADVIELYDRTPLGTPVNI 199 >ErfK_YbiS_YhnG_Q5WC42_54-163_PF03734.4 Length = 110 Score = 99.5 bits (247), Expect = 5e-20 Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 35/134 (26%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + + +L L ++K YPI Q+P G + + Sbjct: 3 PYEIHVSLSQHQLTLLHN-----GSVVKIYPIAVGKMLT---------QTPTGNFVIVNK 48 Query: 74 QLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQID 124 NP + + +++ + IHG VS GC M + ++ Sbjct: 49 APNPGGPFGTMWMSLS------------KLHYGIHGTNDPSSIGKSVSHGCIRMHNKDVE 96 Query: 125 EIFAFVRDAFVGGQ 138 E+ A V Sbjct: 97 ELAATVPIGTRVRI 110 >ErfK_YbiS_YhnG_Q8Z7I2_99-240_PF03734.4 Length = 142 Score = 99.1 bits (246), Expect = 5e-20 Identities = 29/152 (19%), Positives = 42/152 (27%), Gaps = 37/152 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I I E +L ++ + YPI G GD +P ++ Sbjct: 2 PREGIVINLAELRLYYYQPGKNT----VTVYPIGIGQLG-------GDTLTPTMVTTISD 50 Query: 73 NQLNPDS-------RYYLAINIGFP--------NAYD---RAHGYTGKYLMIHGAC---- 110 + NP Y A I P N G ++HG Sbjct: 51 KRANPTWTPTTNIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNAGFG 110 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + D I+ +F V Sbjct: 111 IGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI 142 >ErfK_YbiS_YhnG_Q6D900_96-233_PF03734.4 Length = 138 Score = 99.1 bits (246), Expect = 6e-20 Identities = 23/143 (16%), Positives = 35/143 (24%), Gaps = 23/143 (16%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---------KRREGDFQS 63 I I E +L + + + PI G +++ G + Sbjct: 2 PREGIVINSAEMRLYYYPKGS----KTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT 57 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGC 115 P + + G N Y G IHG VS GC Sbjct: 58 PTAKMHAEYAARGETLQ--KVFPAGPDNPMGLYALYIGNLYAIHGTNANFGIGLRVSHGC 115 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 + I +F V Sbjct: 116 VRLRADDIKYLFNSVPVGTRVQF 138 >ErfK_YbiS_YhnG_Q8CVY2_94-231_PF03734.4 Length = 138 Score = 99.1 bits (246), Expect = 6e-20 Identities = 23/139 (16%), Positives = 39/139 (28%), Gaps = 23/139 (16%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---------LGPKRREGDFQSPEGF 67 I + E +L + ++ +PI G +++E +P Sbjct: 6 IVVNVAEMRLYYYPPDSNT----VEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPN 61 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMT 119 + + + G N Y GK IHG VS GC + Sbjct: 62 TRREYAKRGESLP--AFVPAGPDNPMGLYAIYIGKLYAIHGTNANFGIGLRVSQGCIRLR 119 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + I +F V Sbjct: 120 NDDIKYLFDNVPVGTRVQI 138 >gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Bartonella henselae str. Houston-1] Length = 249 Score = 99.1 bits (246), Expect = 6e-20 Identities = 24/156 (15%), Positives = 39/156 (25%), Gaps = 25/156 (16%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + P + I +E L L Y I GL G Sbjct: 64 PKFWRQQVIYYTSYPPGTLVIDTQECFLYLIGENGRAL-----RYGIGVGKEGLAFEGEG 118 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYT-----GKYLMIHG 108 + + P + P+ + + G N Y IHG Sbjct: 119 VVQRKRRWPNWAPTAAMMAREPERYGHLGRGMPPGPDNPLGARALYLFKNGQDTLFRIHG 178 Query: 109 ACVS--------VGCYAMTDAQIDEIFAFVRDAFVG 136 + S GC + + I +++ V Sbjct: 179 SHESWSIGHAISSGCIRLLNQDIIDLYDRVPIGSRV 214 >gi|48730422|ref|ZP_00264169.1| COG1376: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 323 Score = 98.7 bits (245), Expect = 7e-20 Identities = 26/154 (16%), Positives = 44/154 (28%), Gaps = 37/154 (24%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E +L + ++ ++P+ G G SP ++ Sbjct: 94 PGPREGIVINLAEYRLYYYPKGRN----VVYTFPLGIGREGWG---------SPIAHTTI 140 Query: 71 QPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV--- 111 NP +I G N G +IHG+ Sbjct: 141 TAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGYLIHGSNKKFG 200 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC+ M + + E+ + V + Sbjct: 201 IGMRTSHGCFRMFNNNVLEMASMVPVGTSVRILN 234 >gi|68190685|gb|EAN05343.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 206 Score = 98.7 bits (245), Expect = 7e-20 Identities = 21/149 (14%), Positives = 39/149 (26%), Gaps = 22/149 (14%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSP 64 Q P + + +++ L L Y I G G R + P Sbjct: 63 YQTDEKPGTVVVDTKDKFLYLVMEGGKAM-----RYGIGVGREGFSWSGTARVALKREWP 117 Query: 65 EGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC-------- 110 + P+ ++ + G N Y +HG Sbjct: 118 TWTPPAAMIKRQPELAKWAGGMPPGLSNPLGARALYLFNKNGDTGYRLHGTPEWWSIGQA 177 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC + + I +++ V Sbjct: 178 MSSGCIRLLNQDIIDLYNRVEVGAKVIVK 206 >ErfK_YbiS_YhnG_Q8D0M4_96-235_PF03734.4 Length = 140 Score = 98.7 bits (245), Expect = 8e-20 Identities = 28/152 (18%), Positives = 39/152 (25%), Gaps = 39/152 (25%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I I E +L + + YPI G +P S+ Sbjct: 2 PREGIVINLAELRLYYYPKGQNK----VIVYPIGIGQLG---------RDTPTMVTSISQ 48 Query: 73 NQLNPDS-------RYYLAINIGFP--------NAYDRAHGY---TGKYLMIHGAC---- 110 NP + YLA I P N + +IHG Sbjct: 49 KIPNPTWTPTANIRKNYLAEGITLPSVVPAGPDNPMGQFALRLSAGRGEYLIHGTNADFG 108 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + I+ +F V Sbjct: 109 IGLRVSSGCIRLRPDDIEALFNSVPKGTRVQI 140 >gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5] Length = 330 Score = 98.3 bits (244), Expect = 1e-19 Identities = 27/156 (17%), Positives = 43/156 (27%), Gaps = 37/156 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG I I E +L + ++ ++P+ G G SP S+ Sbjct: 100 PGPREGIVINLAEYRLYYYPKGRN----VVYTFPLGIGREGWG---------SPIAHTSI 146 Query: 71 QPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV--- 111 NP +I G N G +IHG+ Sbjct: 147 TAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGYLIHGSNKKFG 206 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ M + + E+ V + Sbjct: 207 IGMRTSHGCFRMLNNNVLEMAGMVPVGTSVRIINDP 242 >gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC 14580] Length = 165 Score = 98.3 bits (244), Expect = 1e-19 Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 33/134 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ +L+K+YPI Q+P G + + Sbjct: 56 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVGKILT---------QTPRGEFVIVNR 101 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + ++ IHG VS GC M + + E Sbjct: 102 QPNPGGPFGAY-----------WLSLSKQHYGIHGTNNPSSIGKAVSRGCIRMHNRDVLE 150 Query: 126 IFAFVRDAFVGGQP 139 + + V + Sbjct: 151 LASIVPNGTRVSIT 164 >gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 197 Score = 98.0 bits (243), Expect = 1e-19 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 19/143 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ER L L + Y I G G + + P+ Sbjct: 60 EAPGTIIVQTSERYLYLVQGNNRAL-----RYGIGVGREGFTWQGLLKISRKAEWPDWVP 114 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + Q P ++A G N Y G + IHG +S GC+ + Sbjct: 115 PPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNRPDTIGTAISSGCFRLV 172 Query: 120 DAQIDEIFAFVRDAFVGGQPSVQ 142 +A + +++A V Sbjct: 173 NADVMDLYARVPVGTKVVVRQRP 195 >gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 255 Score = 98.0 bits (243), Expect = 1e-19 Identities = 24/161 (14%), Positives = 39/161 (24%), Gaps = 25/161 (15%) Query: 4 KELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + P I I L Y + G G + Sbjct: 84 RRAVISYPTKEPAGTIVIDTANTYLYYVLGGGRAI-----RYGVGVGREGFTWAGVQTIT 138 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC------- 110 + P+ + P ++A G N Y G IHG Sbjct: 139 RKAEWPDWRPPAEMIARQPYLPRFMAGGPG--NPLGARAMYLGSTTYRIHGTNDPSTIGK 196 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ----PSVQVSIY 146 VS GC +T+ ++++F S + Sbjct: 197 FVSSGCIRLTNEDVEDLFGRTGIGTRVVVLPKSASRPIEAR 237 >ErfK_YbiS_YhnG_Q8UCZ2_64-202_PF03734.4 Length = 139 Score = 98.0 bits (243), Expect = 1e-19 Identities = 19/141 (13%), Positives = 40/141 (28%), Gaps = 22/141 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 + + R+L + Y + GL G + P + Sbjct: 2 PAGTVVVDTPARRLYYVMGEGRAM-----RYGVGVGRQGLALKGDAYIGRKSEWPSWTPT 56 Query: 70 VQPNQLNP-DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGC 115 + +P + ++ + G N Y + +HG +S GC Sbjct: 57 ANMMRRDPRNLKFAGGMPGGPNNPLGARALYLYRGGNDTMFRLHGTNQPQSIGHAMSSGC 116 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 M + I ++++ V Sbjct: 117 IRMLNHDIIDLYSRVPVGSRV 137 >gi|50085556|ref|YP_047066.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 462 Score = 98.0 bits (243), Expect = 1e-19 Identities = 34/156 (21%), Positives = 48/156 (30%), Gaps = 34/156 (21%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 ++ LP I K R+L L+ Q+I S+P S D SP Sbjct: 320 VRNDLPEDIHLIIAHKGARQLYLF----NSRNQMIASFPATIGSS---------DTPSPT 366 Query: 66 GFYSVQPNQLNPDSRY------------YLAINIGFPNAYDRAH-GYTGKYLMIHGAC-- 110 G Y V NP Y L++ G G + K IHG Sbjct: 367 GTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNP 426 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +++ VR Sbjct: 427 SAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE 462 >gi|13471882|ref|NP_103449.1| probable carnitine operon oxidoreductase [Mesorhizobium loti MAFF303099] Length = 242 Score = 98.0 bits (243), Expect = 1e-19 Identities = 24/152 (15%), Positives = 41/152 (26%), Gaps = 22/152 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +K + P I I + L L + Y I G G Sbjct: 83 RPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAI-----RYGIGVGRDGFGWAGIVKVG 137 Query: 62 Q---SPEGFYSVQPNQLNPD-SRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P + +P + + G N Y + IHG Sbjct: 138 RMAEWPTWTPPAEMVARDPKARPWANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEP 197 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + I ++ + ++ Sbjct: 198 WTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKV 229 >ErfK_YbiS_YhnG_Q89VM1_60-191_PF03734.4 Length = 132 Score = 97.6 bits (242), Expect = 1e-19 Identities = 27/139 (19%), Positives = 42/139 (30%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I I ER L L + Y I G G + P+ Sbjct: 1 ETPGTIIISTAERHLYLVQPGGRAI-----RYGIGVGRDGFQWQGLVNITNKKEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + Q P ++A G N Y G + IHG VS GC+ + Sbjct: 56 PPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGTTVYRIHGTNRPDTIGTKVSSGCFRLV 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +++ V Sbjct: 114 NNDVADLYDRVPVGTKVVI 132 >gi|9392598|gb|AAF87210.1| unknown [Rhizobium leguminosarum bv. viciae] Length = 227 Score = 97.6 bits (242), Expect = 2e-19 Identities = 25/154 (16%), Positives = 39/154 (25%), Gaps = 26/154 (16%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + P I + ER L A Y I G G Sbjct: 69 PQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAM-----RYGIGVGKQGFAWAGTA 123 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY------TGKYLMIH 107 + P + PD Y+ + G N Y +H Sbjct: 124 YVAWKQEWPNWHPPKEMAVRRPDLAKYVEDGMGPGLSNPLGARAMYLFNEDGKDTLFRLH 183 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDA 133 G S GC + + + ++++ VR Sbjct: 184 GTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPG 217 >gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 186 Score = 97.6 bits (242), Expect = 2e-19 Identities = 24/153 (15%), Positives = 42/153 (27%), Gaps = 29/153 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ G P +I + K KL + ++ K +P+ + Sbjct: 15 PIWPLGDNPRAGDP-FIIVNKATNKLAYID-----DGKIQKVFPVATGK---------TN 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC---- 110 +PEG + + +P N G G IHG Sbjct: 60 ELTPEGTFDIVMKAKDPYYIAKDIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSS 119 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC M ++ +F + Sbjct: 120 IGKYISQGCIRMKKNDVEYLFDRIPIGTKVSIV 152 >gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Synechococcus elongatus PCC 6301] Length = 208 Score = 97.6 bits (242), Expect = 2e-19 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 29/136 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + +R++ +++ + I SYP+ G ++P G + V + Sbjct: 83 KLVLSLRQRRVTVYR-----DRLAIASYPVGIGKPGW---------ETPRGTFRVMSKIV 128 Query: 76 NPDS--RYYLAINIGFPN-----AYDRAHGYTGKYLMIHGA--------CVSVGCYAMTD 120 NP + ++ PN + + HG VS GC M + Sbjct: 129 NPTWQHPWNGSLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKN 188 Query: 121 AQIDEIFAFVRDAFVG 136 I +F V + + Sbjct: 189 RDIRALFELVEEGAIV 204 >ErfK_YbiS_YhnG_Q8EAY9_93-230_PF03734.4 Length = 138 Score = 97.2 bits (241), Expect = 2e-19 Identities = 29/150 (19%), Positives = 39/150 (26%), Gaps = 37/150 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE-GFYSVQ 71 I I E +L + + ++ PI G +PE SVQ Sbjct: 2 PREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------TPENWVTSVQ 48 Query: 72 PNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIHGAC------ 110 + NP I G N Y G IHG Sbjct: 49 RKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIG 108 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + I+ +F V Sbjct: 109 LRVSQGCVRLRHDDIEHLFKTVPIGTRVQF 138 >gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] Length = 316 Score = 97.2 bits (241), Expect = 2e-19 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 15/138 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + ++ K ++ L+++ G + + + +G K +EGD ++P GFY Sbjct: 52 YTQDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEVITG--LMGDKEKEGDLKTPVGFYE 109 Query: 70 VQPNQLNPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYAM 118 + NP +YY A +PN D+ TG + IHG + GC A+ Sbjct: 110 LGMK-FNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCIAL 168 Query: 119 TDAQIDEIFAFVRDAFVG 136 + ++++ V Sbjct: 169 FNDKLEDFAKIVA-GKKV 185 >gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 253 Score = 97.2 bits (241), Expect = 2e-19 Identities = 22/155 (14%), Positives = 38/155 (24%), Gaps = 30/155 (19%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + I + +L ++ K++P+ +PEG Sbjct: 17 SAFANTDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGN 62 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYAM 118 + + N + N G IHG S GC M Sbjct: 63 FCIITKFKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRM 122 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 D I ++ V+ I F + Sbjct: 123 HDRDIQWLYDRVQLQTKV-------IISRFHTSPE 150 >gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Azoarcus sp. EbN1] Length = 162 Score = 97.2 bits (241), Expect = 2e-19 Identities = 29/164 (17%), Positives = 46/164 (28%), Gaps = 47/164 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 IRI ++L L+ G + I+ YP+ G G R G +P G + ++ Sbjct: 6 IRISIAAQRLFLF----GPDGACIRCYPVSTGEKGAGEVRDSGC--TPRGLHRIRARIGA 59 Query: 74 ----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKYL 104 + + + P D +Y+ Sbjct: 60 NAPAGAVFRGRRRTGEVWSPGLAAQHPG-RDWILSRILWLCGCEPGRNRLGDVDSMRRYI 118 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 IHG S GC M + I E+F V Sbjct: 119 YIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVGTAVEIVG 162 >gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 96.8 bits (240), Expect = 3e-19 Identities = 24/147 (16%), Positives = 42/147 (28%), Gaps = 19/147 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 V + + +P + I + L Y I G G + Sbjct: 111 VRQVVDYASHQTPGTVIIDTQNTFLYFVLNDRQAM-----RYGIGVGREGFAWSGEQTVA 165 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC------- 110 + P+ + P ++A G N Y G IHG Sbjct: 166 RKAEWPDWHPPAEMVSRQPYLPRFMAGGPG--NPLGARAMYLGETEYRIHGTNKPDTIGK 223 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC +T+ + +++ V+ Sbjct: 224 RVSSGCIRLTNEDVVDLYERVKVGAKV 250 >gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 415 Score = 96.8 bits (240), Expect = 3e-19 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 34/160 (21%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + ++ LP I K ++L L+ Q+I S+P S D Sbjct: 269 IVPNVRNDLPEDIHLIIAHKGAKQLYLF----NSRNQMIASFPATIGS---------TDT 315 Query: 62 QSPEGFYSVQPNQLNPDSRY------------YLAINIGFPNAYDRAH-GYTGKYLMIHG 108 SP G Y V NP Y L++ G G + K IHG Sbjct: 316 PSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHG 375 Query: 109 AC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +++ VR Sbjct: 376 TPNPSLISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE 415 >ErfK_YbiS_YhnG_Q6ND97_41-173_PF03734.4 Length = 133 Score = 96.8 bits (240), Expect = 3e-19 Identities = 28/137 (20%), Positives = 42/137 (30%), Gaps = 18/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 SP I + ER+L L YP+ G G + +G F++P Sbjct: 1 YSPGTIVVRTGERRLYLVVEPGHAV-----RYPVGVGKAGKQWAGVTKIDGKFRNPAWAP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGAC--------VSVGCYAMT 119 + + P + N A G IHG VS GC M Sbjct: 56 PAEVKRDVPTIPDVIPGG-SPANPMGVAAMTLAGGEYAIHGTNRPQSIGGFVSYGCIRML 114 Query: 120 DAQIDEIFAFVRDAFVG 136 + I +++ V Sbjct: 115 NDDITDLYERVPVGTQV 131 >gi|68190182|gb|EAN04842.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 199 Score = 96.8 bits (240), Expect = 3e-19 Identities = 24/158 (15%), Positives = 44/158 (27%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ + G +P I + E L + Y + GL G Sbjct: 47 PRYRKQRVPYDGGEAPGTIVVNTSEFYLYHVEEGGWAM-----RYGVGVGEQGLTLKGKA 101 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA 109 + + P + + P +Y + G N Y + IHG Sbjct: 102 KIGRKAEWPSWTPTANMLRRKPHLVQYAGGVEGGLNNPLGARALYLYRGGRDTMFRIHGT 161 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC +T+ I +++ Sbjct: 162 NEPWSIGNAMSSGCIRLTNDDIVDLYERTPVGATVVVI 199 >ErfK_YbiS_YhnG_Q6N0G6_60-191_PF03734.4 Length = 132 Score = 96.4 bits (239), Expect = 3e-19 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ER L L + Y I G G + + P+ Sbjct: 1 EAPGTIIVQTSERYLYLVQGNNRAL-----RYGIGVGREGFTWQGLLKISRKAEWPDWVP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + Q P ++A G N Y G + IHG +S GC+ + Sbjct: 56 PPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNRPDTIGTAISSGCFRLV 113 Query: 120 DAQIDEIFAFVRDAFVG 136 +A + +++A V Sbjct: 114 NADVMDLYARVPVGTKV 130 >ErfK_YbiS_YhnG_Q5ZV45_94-231_PF03734.4 Length = 138 Score = 96.4 bits (239), Expect = 3e-19 Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L + ++ +YP+ G ++P G + ++N Sbjct: 6 VVINLAEYRLYYFPPDDN----VVMTYPVGIGKKGW---------ETPLGLSRIISKEIN 52 Query: 77 PDSRYYL---------------AINIGFPNAYDRAHGYTG-KYLMIHGAC--------VS 112 P R + G N + G ++IHG+ VS Sbjct: 53 PTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQHVLRLGWPAILIHGSNRVDGIGAKVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC M I+ +++ V Sbjct: 113 AGCIRMLPEDIEHLYSLVSVGTPVRI 138 >gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Bradyrhizobium japonicum USDA 110] Length = 541 Score = 96.4 bits (239), Expect = 4e-19 Identities = 23/157 (14%), Positives = 49/157 (31%), Gaps = 22/157 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 V+++ P P+ I + + +K+ ++ + P+ G Sbjct: 80 VAEKEVGTKPQGPLVIVVSIDRQKVTVYDTNG-----VFAESPVSTGMKG---------H 125 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +P G +SV S Y + + + + + G S GC M A Sbjct: 126 STPMGVFSVIQKHKFHHSNIYSGAPMPYMQRITWSGVAMHAGV-LPGYPASHGCIRMPMA 184 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 +++ + + + P MT + Q Sbjct: 185 FAVKMWNWTKMGARV-------IVSPGEMTPHSFQHP 214 >ErfK_YbiS_YhnG_Q5P0G8_3-160_PF03734.4 Length = 158 Score = 96.4 bits (239), Expect = 4e-19 Identities = 29/162 (17%), Positives = 46/162 (28%), Gaps = 47/162 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 IRI ++L L+ G + I+ YP+ G G R G +P G + ++ Sbjct: 4 IRISIAAQRLFLF----GPDGACIRCYPVSTGEKGAGEVRDSGC--TPRGLHRIRARIGA 57 Query: 74 ----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKYL 104 + + + P D +Y+ Sbjct: 58 NAPAGAVFRGRRRTGEVWSPGLAAQHPG-RDWILSRILWLCGCEPGRNRLGDVDSMRRYI 116 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 IHG S GC M + I E+F V Sbjct: 117 YIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVGTAVEI 158 >ErfK_YbiS_YhnG_Q87G47_99-238_PF03734.4 Length = 140 Score = 96.4 bits (239), Expect = 4e-19 Identities = 27/148 (18%), Positives = 41/148 (27%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + ++ +P+ G +P S+ + N Sbjct: 6 IVINLAELRLYYFPEGED----VVHVFPVGIGRIG---------RDTPVMTTSISQKRPN 52 Query: 77 PDSRY-------YLAINIGFP--------NAYDR---AHGYTGKYLMIHGAC-------- 110 P Y A + P N Y +IHG Sbjct: 53 PTWTPPASIRAEYRAKGVDLPAVVPAGPDNPLGLFALRLAYGNGEYLIHGTNKDFGIGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + I+ +F VR Sbjct: 113 VSAGCIRMDPSDIEWLFDKVRRGEKVNI 140 >ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 Length = 110 Score = 96.4 bits (239), Expect = 4e-19 Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ +L+K+YPI Q+P G + + Sbjct: 3 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVGKILT---------QTPRGEFVIVNR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + ++ IHG VS GC M + + E Sbjct: 49 QPNPGGPFGAY-----------WLSLSKQHYGIHGTNNPSSIGKAVSRGCIRMHNRDVLE 97 Query: 126 IFAFVRDAFVGGQ 138 + + V + Sbjct: 98 LASIVPNGTRVSI 110 >ErfK_YbiS_YhnG_Q6N230_94-225_PF03734.4 Length = 132 Score = 96.4 bits (239), Expect = 4e-19 Identities = 22/137 (16%), Positives = 35/137 (25%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I L Y + G G + + P+ Sbjct: 1 EPAGTIVIDTANTYLYYVLGGGRAI-----RYGVGVGREGFTWAGVQTITRKAEWPDWRP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC +T Sbjct: 56 PAEMIARQPYLPRFMAGGPG--NPLGARAMYLGSTTYRIHGTNDPSTIGKFVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + ++++F Sbjct: 114 NEDVEDLFGRTGIGTRV 130 >gi|13474433|ref|NP_106001.1| hypothetical protein mlr5313 [Mesorhizobium loti MAFF303099] Length = 205 Score = 96.4 bits (239), Expect = 4e-19 Identities = 20/150 (13%), Positives = 41/150 (27%), Gaps = 22/150 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 +E+ P I + + + L + Y I G G Sbjct: 58 QEVNYDTKEKPGTIIVDTQNKFLYFVEDDGRAI-----RYGIGVGREGFEWHGTAHIALK 112 Query: 61 FQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY---TGK--YLMIHGAC---- 110 + P + + P+ ++ + G N Y G +HG+ Sbjct: 113 REWPTWTPPREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNS 172 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC + + I +++ Sbjct: 173 IGKAMSSGCIRLMNQDIIDLYDRTSVGAKV 202 >gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Clostridium tetani E88] Length = 312 Score = 96.4 bits (239), Expect = 4e-19 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 30/142 (21%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I K++R L ++ + ++ K YP+ + +PEG +++ Sbjct: 173 YSMVINKDKRILTVYL-----DGKVYKKYPVAAGASPSY---------TPEGKFTIVSKL 218 Query: 75 LNPDSRYYLAI----NIGFPNAYDRAHG----YTGKYLMIHG--------ACVSVGCYAM 118 +NP N + G IHG VS+GC M Sbjct: 219 INPTWISTRTGQVISGGTPQNPLGKRWLGLSIDGGSMYGIHGSNNPWSIGTNVSLGCIRM 278 Query: 119 TDAQIDEIFAFVRDAFVGGQPS 140 + ++E+F F+ + Sbjct: 279 FNNDVEELFDFIPMNCPIWIGN 300 >gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501] Length = 191 Score = 96.4 bits (239), Expect = 4e-19 Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 32/151 (21%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + E Q L + + +ER++ +++ Q+I +Y + G Sbjct: 55 PTAPENNQTLATH---VVLNLKERRVYVYQDD-----QVIANYRVAIGRPGW-------- 98 Query: 61 FQSPEGFYSV-----QPNQLNPDSRYYLAINIGFP--NAYDRAHGYTGKYLMIHGAC--- 110 ++P+G +SV P NP + A P + GKY+ HG Sbjct: 99 -ETPKGNFSVIQMVEDPQWKNPWNGRVSAPGPNSPLGERWIGFSREGGKYIGFHGTPGEH 157 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + E++ V++ Sbjct: 158 VMGQAVSHGCVRMRNRDVKELYELVQNGIPV 188 >gi|71363427|ref|ZP_00654071.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 171 Score = 96.0 bits (238), Expect = 4e-19 Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 52/169 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I I ++ L +++ + ++I YPI G+G ++ G +P G + + Sbjct: 11 IVISIAQQTLTVYRRQ-----KVIAEYPISTAKNGIGSQQDSGC--TPLGQHIIAEKIGG 63 Query: 74 ---------QLNPDSRYYLAINIGFPNA-YDRAHGY-----------------------T 100 Y A +G N D Sbjct: 64 NAPSHTVFIGRIATGEIYNA-ELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTY 122 Query: 101 GKYLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 +Y+ IHG S GC M + I E+F + + + Sbjct: 123 HRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEGTAVNIIAQ 171 >gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1] Length = 167 Score = 96.0 bits (238), Expect = 5e-19 Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 51/167 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G +E ++P G++ + Sbjct: 9 ILVDLETQRLYL--------PKHQKCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGA 58 Query: 74 ---------QLNPDSRYYLA-INIGFPNAYDRAHGY-------------------TGKYL 104 P Y + + FP D +Y+ Sbjct: 59 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 117 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 IHG S GC M + + E+F V + + ++ Sbjct: 118 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPEYALVYLSEQRL 164 >ErfK_YbiS_YhnG_Q57D03_90-229_PF03734.4 Length = 140 Score = 96.0 bits (238), Expect = 5e-19 Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I ++R L L + + Y I GL G + P Sbjct: 1 YKPGTIVIDPKKRFLYLVETSTTA-----RRYGIAVGKQGLEFQGKATISAKREWPRWIP 55 Query: 69 SVQPNQLNPD--SRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--CV------SV 113 + + + +P R+ ++ G N Y Y+ IHG S Sbjct: 56 TKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTIGSSASN 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC+ M + + +++ V Sbjct: 116 GCFRMINEDVMDLYDRVTLGTEV 138 >gi|46192901|ref|ZP_00005863.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 254 Score = 96.0 bits (238), Expect = 5e-19 Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 23/156 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 V +E+ P P I + R+L + Y I GL G + + Sbjct: 60 VRQEVAYNGPEKPGTIVVDTFARRLYYVTEEGRAM-----RYAIAVGRAGLAFRGNAKVQ 114 Query: 59 GDFQSPEGFYSVQPNQLNPDS--RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA-- 109 + P + + P+ Y + G N Y + IHG Sbjct: 115 RKREWPSWQPTANMIRTQPEMYAPYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQ 174 Query: 110 ------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC + + +++ V Sbjct: 175 NASIGHATSAGCIRLFNQDAIDLYGRVNLGTPVKVR 210 >ErfK_YbiS_YhnG_Q60AJ8_93-237_PF03734.4 Length = 145 Score = 96.0 bits (238), Expect = 5e-19 Identities = 28/149 (18%), Positives = 44/149 (29%), Gaps = 36/149 (24%) Query: 17 IRIFKEERKLELWK-AKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + E +L + A G + + +YPI D++SP G V Sbjct: 6 IVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRM---------DWRSPLGLTKVVAKVK 56 Query: 76 NPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC--------- 110 +P R +I G N + G +IHG Sbjct: 57 DPVWRPPASIKAEHAKNGEILPDVVPAGPNNPLGQFAMRLGVPGYLIHGTDQDKSYGIGM 116 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 V+ GC M + ++F V Sbjct: 117 RVTHGCIRMYPEDVAKLFPEVAVGTPVNL 145 >gi|69930773|ref|ZP_00627470.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 503 Score = 96.0 bits (238), Expect = 5e-19 Identities = 26/148 (17%), Positives = 45/148 (30%), Gaps = 22/148 (14%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P P+ I I + L+++ A L P+ G +P G +SV Sbjct: 104 PQGPIIIAISIRRQTLKVYDANG-----LFAETPVSTGMRG---------HSTPMGVFSV 149 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 Q S Y + + + + + G S GC M + +++ + Sbjct: 150 IQKQKWHRSNIYSGAPMPYMQRITWSGIAMHAGV-LPGYPASHGCIRMPMSFAVKMWRWT 208 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRH 158 R I P +T A Sbjct: 209 RIGARV-------IITPGEVTPAEFSHP 229 >gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Bradyrhizobium japonicum USDA 110] Length = 272 Score = 95.6 bits (237), Expect = 6e-19 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I L Y + G G + + P+ Sbjct: 98 EPAGTIVIDTGNTYLYYVLGNGRAI-----RYGVGVGREGFTWSGVQSVSRKAEWPDWHP 152 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK-YLMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC MT Sbjct: 153 PAEMIARQPYLPRFVAGGPG--NPLGARAMYLGSSEYRIHGTNDPTTIGKFVSSGCIRMT 210 Query: 120 DAQIDEIFAFVRDAFVG 136 + + ++F+ V Sbjct: 211 NEDVTDLFSRVNIGARV 227 >gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methylococcus capsulatus str. Bath] Length = 177 Score = 95.6 bits (237), Expect = 7e-19 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 47/174 (27%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREGDFQSP 64 Q ++ + + L++ + ++ + I G G +R D ++P Sbjct: 11 PAAQSENPDPWLLVETKPHVLKVMQGD-----TPVEVFTKIAIGQHGAGVDKRRNDNKTP 65 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-------------------------- 98 G Y + +N +S+++ + +PN G Sbjct: 66 LGEYRIGW--INENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQ 123 Query: 99 --YTGKYLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 G + IHG + GC A+T+ QID++ +VR + Sbjct: 124 DTPLGGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTLVVIR 177 >ErfK_YbiS_YhnG_Q6D623_94-234_PF03734.4 Length = 141 Score = 95.6 bits (237), Expect = 7e-19 Identities = 25/153 (16%), Positives = 35/153 (22%), Gaps = 40/153 (26%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I + E +L + + YPI G +P SV Sbjct: 2 PREGIVVNLAELRLYYYPKGKNT----VIVYPIGIGQLG---------RNTPLMTTSVSE 48 Query: 73 NQLNPDSRYYLAI----------------NIGFPNAYDRAHGYT---GKYLMIHGAC--- 110 + NP I G N G ++HG Sbjct: 49 KRENPTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNADF 108 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + I +F V Sbjct: 109 GIGMRVSSGCIRLRPDDIKALFDNVPVGTRVQI 141 >gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psychrobacter arcticum 273-4] Length = 173 Score = 95.6 bits (237), Expect = 7e-19 Identities = 28/171 (16%), Positives = 48/171 (28%), Gaps = 54/171 (31%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I I ++ L ++K + ++I YP+ G+G ++ G +P G + + Sbjct: 11 IVISIAQQTLTVYKRQ-----KVIAQYPVSTAKNGMGSQQDSGC--TPLGKHVIAEKIGA 63 Query: 74 ---------QLNPDSR-YYLAINIGFPNAYDRAHGY-----------------------T 100 P Y + P D Sbjct: 64 GMLSNAVFIGRVPTGETYNSELGASHP-ERDWILSRILWLSGLEEGVNKGSNSQGGCDTY 122 Query: 101 GKYLMIHGACVS--------VGCYAMTDAQIDEIFAFVRD--AFVGGQPSV 141 +Y+ IHG S GC M + I E+F V + Sbjct: 123 QRYIYIHGTPDSEPMGIPLSHGCVRMRNQDIIELFEQVDVDKGTPVNIIAQ 173 >gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Bradyrhizobium japonicum USDA 110] Length = 171 Score = 95.3 bits (236), Expect = 7e-19 Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 18/131 (13%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGF 67 SP I + ER+L L YP+ G G R +G +++P Sbjct: 36 DYSPGTIVVKTNERRLYLILDDGHAV-----RYPVGVGKSGKQWAGTTRIDGKYRNPAWS 90 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGACV--------SVGCYAM 118 + + P + N A G IHG V S GC M Sbjct: 91 PPAEVKRDKPQLPDVIPGG-SPRNPMGVAAMTLAGGEYAIHGTNVPGSVGGFVSYGCIRM 149 Query: 119 TDAQIDEIFAF 129 + I ++++ Sbjct: 150 LNDDITDLYSR 160 >gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 253 Score = 95.3 bits (236), Expect = 8e-19 Identities = 22/155 (14%), Positives = 38/155 (24%), Gaps = 30/155 (19%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 + I + +L ++ K++P+ +PEG Sbjct: 17 SAFADTDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGN 62 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYAM 118 + + N + N G IHG S GC M Sbjct: 63 FCIITKFKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRM 122 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDA 153 D I ++ V+ I F + Sbjct: 123 HDRDIQWLYDRVQLQTKV-------IISRFHTSPE 150 >gi|1742774|dbj|BAA15464.1| Probable carnitine operon oxidoreductase CaiA (EC 1.3.99.-). [Escherichia coli] Length = 500 Score = 95.3 bits (236), Expect = 9e-19 Identities = 35/174 (20%), Positives = 49/174 (28%), Gaps = 47/174 (27%) Query: 1 PVSKE-------LKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K + LP +P I + E +L + +++ YPI GL Sbjct: 74 PVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGEN----IVQVYPIGIGLQGL 129 Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDS-------RYYLAINIGFP--------NAYDRAH 97 ++P V NP + L I P N R Sbjct: 130 ---------ETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA 180 Query: 98 GY---TGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +IHG VS GC M I +F+ VR Sbjct: 181 LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVID 234 >ErfK_YbiS_YhnG_Q883T0_95-232_PF03734.4 Length = 138 Score = 94.9 bits (235), Expect = 1e-18 Identities = 26/151 (17%), Positives = 40/151 (26%), Gaps = 37/151 (24%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I I E ++ + ++ +YP+ G G SP G V Sbjct: 1 GPREGIVINLAEYRMYYYPKGQN----VVHTYPLGVGREGWG---------SPIGVTKVT 47 Query: 72 PNQLNPDSRYYLAI---------------NIGFPNAYDRAH-GYTGKYLMIHGACV---- 111 NP +I G N G +IHG+ Sbjct: 48 AKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGI 107 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC+ M + + E+ Sbjct: 108 GMRTSHGCFRMYNNNVLELADMAPVGTTVRI 138 >ErfK_YbiS_YhnG_Q89UE9_98-229_PF03734.4 Length = 132 Score = 94.9 bits (235), Expect = 1e-18 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I L Y + G G + + P+ Sbjct: 1 EPAGTIVIDTGNTYLYYVLGNGRAI-----RYGVGVGREGFTWSGVQSVSRKAEWPDWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK-YLMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC MT Sbjct: 56 PAEMIARQPYLPRFVAGGPG--NPLGARAMYLGSSEYRIHGTNDPTTIGKFVSSGCIRMT 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + ++F+ V Sbjct: 114 NEDVTDLFSRVNIGARV 130 >gi|15025432|gb|AAK80371.1| Uncharacterized protein, ErfK family; contains peptidoglycan-binding domain [Clostridium acetobutylicum ATCC 824] Length = 235 Score = 94.9 bits (235), Expect = 1e-18 Identities = 19/150 (12%), Positives = 40/150 (26%), Gaps = 32/150 (21%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + +L + I + ++ +++ +L+K+Y I Sbjct: 32 PTNSKLSGYNSKKKILIVVDVVSNRMCVFQDD-----KLLKTYTIAGGKPST-------- 78 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVS 112 SP G +++ + + P IHG S Sbjct: 79 -PSPIGTWTIVGKDTWGEGFGGRWMGFNVP----------WGKYGIHGTIFPDSIGGNTS 127 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 GC M + + E++ Sbjct: 128 HGCIRMRNDDVRELYKITPVGTKVIVQGGP 157 >ErfK_YbiS_YhnG_Q89E58_121-252_PF03734.4 Length = 132 Score = 94.5 bits (234), Expect = 1e-18 Identities = 23/137 (16%), Positives = 39/137 (28%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P + I + L Y I G G + + P+ Sbjct: 1 QTPGTVIIDTQNTFLYFVLNDRQAM-----RYGIGVGREGFAWSGEQTVARKAEWPDWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC +T Sbjct: 56 PAEMVSRQPYLPRFMAGGPG--NPLGARAMYLGETEYRIHGTNKPDTIGKRVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + +++ V+ Sbjct: 114 NEDVVDLYERVKVGAKV 130 >ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 Length = 127 Score = 94.5 bits (234), Expect = 1e-18 Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 29/142 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG P I + K +L + ++ Y + D +PEG +SV Sbjct: 1 PGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGK---------TDDLTPEGEFSV 45 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCY 116 NP R N G G+ IHG VS GC Sbjct: 46 TVKAENPYYRKKNIEGGSPDNPLGARWIGFDAKGTDGRIYGIHGTNREESVGKFVSNGCI 105 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M + ++ +F + Sbjct: 106 RMHNDEVVHLFQTIPVGTRVLI 127 >ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 Length = 156 Score = 94.5 bits (234), Expect = 1e-18 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 51/160 (31%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G +E ++P G++ + Sbjct: 6 ILVDLETQRLYL--------PKHQKCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGA 55 Query: 74 ---------QLNPDSRYYLA-INIGFPNAYDRAHGY-------------------TGKYL 104 P Y + + FP D +Y+ Sbjct: 56 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 114 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG S GC M + + E+F V + + Sbjct: 115 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPEYALV 154 >ErfK_YbiS_YhnG_Q73D94_22-142_PF03734.4 Length = 121 Score = 94.1 bits (233), Expect = 2e-18 Identities = 20/134 (14%), Positives = 34/134 (25%), Gaps = 23/134 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I + +L ++ K++P+ +PEG + + Sbjct: 2 DHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGNFCIITK 47 Query: 74 QLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYAMTDAQID 124 N + N G IHG S GC M D I Sbjct: 48 FKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQ 107 Query: 125 EIFAFVRDAFVGGQ 138 ++ V+ Sbjct: 108 WLYDRVQLQTKVII 121 >ErfK_YbiS_YhnG_Q8Z5P0_93-230_PF03734.4 Length = 138 Score = 94.1 bits (233), Expect = 2e-18 Identities = 25/146 (17%), Positives = 37/146 (25%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL- 75 I + E +L + A L PI G ++P + + + Sbjct: 6 IVVNVAEMRLYYYPAGTNTVEVL----PIGIGQAG---------RETPRNWVTAVERKQD 52 Query: 76 --------NPDSRYYLAI-------NIGFPNAYDRAHGYTGKYLMIHGAC--------VS 112 N Y G N Y G+ HG VS Sbjct: 53 GPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I +F VR Sbjct: 113 QGCIRLRNDDIKYLFDHVRVGTRVQI 138 >ErfK_YbiS_YhnG_Q8KR47_93-230_PF03734.4 Length = 138 Score = 94.1 bits (233), Expect = 2e-18 Identities = 25/146 (17%), Positives = 38/146 (26%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS-VQPNQL 75 I + E +L + L PI G ++P + + V+ Q Sbjct: 6 IIVNAAEMRLYYYPPGSNTVEVL----PIGIGQAG---------RETPRNWVTAVERKQE 52 Query: 76 NPDSRYYL---------------AINIGFPNAYDRAHGYTGKYLMIHGAC--------VS 112 P + G N Y G+ IHG VS Sbjct: 53 GPTWSPTPNTRRAYAAEGKTLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNSNFGIGLRVS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I +F V Sbjct: 113 QGCIRLRNNDIKYLFDNVPVGTRVQL 138 >ErfK_YbiS_YhnG_Q6G2L0_77-216_PF03734.4 Length = 140 Score = 94.1 bits (233), Expect = 2e-18 Identities = 23/143 (16%), Positives = 37/143 (25%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P + I +E L L Y I GL G + + P Sbjct: 1 YPPGTLVIDTQECFLYLIGENGRAL-----RYGIGVGKEGLAFEGEGVVQRKRRWPNWAP 55 Query: 69 SVQPNQLNPDSRYY--LAINIGFPNAYDRAHGYT-----GKYLMIHGACVS--------V 113 + P+ + + G N Y IHG+ S Sbjct: 56 TAAMMAREPERYGHLGRGMPPGPDNPLGARALYLFKNGQDTLFRIHGSHESWSIGHAISS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC + + I +++ V Sbjct: 116 GCIRLLNQDIIDLYDRVPIGSRV 138 >gi|62289117|ref|YP_220910.1| lipoprotein, hypothetical [Brucella abortus biovar 1 str. 9-941] Length = 206 Score = 93.7 bits (232), Expect = 2e-18 Identities = 24/151 (15%), Positives = 40/151 (26%), Gaps = 22/151 (14%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQ 62 +K P I + E+ L L + Y I G G R + Sbjct: 60 VKYATDEKPGTIIVDTREKFLYLIMPEGKAV-----RYGIGVGRRGFEWSGTARVAMKRE 114 Query: 63 SPEGFYSVQPNQLNPDSRYYL-AINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 P + P+ Y ++ G N Y +HG Sbjct: 115 WPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALYLYNKGGDTGYRLHGTPEWWSIG 174 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC + + I +++ V Sbjct: 175 KAMSSGCIRLMNQDIIDLYNRVEQGAKVVVK 205 >gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 181 Score = 93.7 bits (232), Expect = 2e-18 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 47/167 (28%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDFQSPEGFYSVQ 71 V+I I E +L + + +++ ++ + G R GD Q+P G + + Sbjct: 22 QDVWILIDTSEHRLSVMRKD-----KVLLTFDNVAIGRYGASRSRMRGDNQTPLGSFQIS 76 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYL--------------------------- 104 + R+Y I +PN + + Sbjct: 77 WVKQ--HDRFYRFYGINYPNREVADLALSEGRISRQVWENIMNAIESTGLSPQDTSLGGY 134 Query: 105 -----------MIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +H + GC A+T+ QID++ +V+ Sbjct: 135 IGIHGIGKGDQAVHSRFNWTNGCVALTNVQIDQLNPWVKLGTRVVIR 181 >gi|15075086|emb|CAC46643.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti] Length = 232 Score = 93.7 bits (232), Expect = 2e-18 Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 22/143 (15%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS---PEGF 67 P I I + L L + Y I G G ++ P Sbjct: 82 AEVPGTIIIDGNQHFLYLVQPGGQAI-----RYGIGVGREGFGWAGIVRVGRTAEWPTWT 136 Query: 68 YSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA--------CVSV 113 + +P++ ++ + G N Y + IHG VS Sbjct: 137 PPPEMVARDPNAAKWAGGMPGGPDNPLGARALYLYEGDNDTIYRIHGTVEPWTIGLDVSS 196 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC M + I ++ + V Sbjct: 197 GCIRMNNDDIIDLHSRVGVGAKV 219 >ErfK_YbiS_YhnG_Q9HZZ0_93-230_PF03734.4 Length = 138 Score = 93.7 bits (232), Expect = 2e-18 Identities = 24/151 (15%), Positives = 42/151 (27%), Gaps = 37/151 (24%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I E +L + ++ +YP+ G G SP + Sbjct: 1 GPREGVVINLAEYRLYYYPKGQN----VVHTYPLGIGREGWG---------SPIANTRIT 47 Query: 72 PNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV---- 111 +P +I G N G +IHG+ Sbjct: 48 AKTKDPAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGYLIHGSNKKFGI 107 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC+ M +A + +F+ + Sbjct: 108 GTRTSHGCFRMYNADVTHLFSMISVGTSVRI 138 >gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120] Length = 272 Score = 93.3 bits (231), Expect = 3e-18 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 29/135 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R+ ++ + +I SYPI G ++P G ++V + + Sbjct: 148 VVVDLSDRRTYVYAGDI-----VIASYPIAIGKRGW---------ETPTGTFNVSHMEHD 193 Query: 77 PDSRYYLAINI-------GFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDA 121 P R+ + I + + HG S GC M ++ Sbjct: 194 PIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGTAISHGCLRMRNS 253 Query: 122 QIDEIFAFVRDAFVG 136 + ++ V Sbjct: 254 DVRLLYDQVELGTPV 268 >gi|15072991|emb|CAC41450.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 278 Score = 93.3 bits (231), Expect = 3e-18 Identities = 24/162 (14%), Positives = 38/162 (23%), Gaps = 26/162 (16%) Query: 2 VSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P P I + R L Y I G G Sbjct: 122 RFHRQIVDYPTKERPGTIVVNTPSRFLYYVLPGGKAV-----RYGIGVGKQGFAWEGEAY 176 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY------TGKYLMIHG 108 + P + + P+ Y+ + G N Y +HG Sbjct: 177 VAWKQEWPTWHPPKEMAERKPEVARYVEAGMGPGISNPLGARALYLFNKEGRDTLFRLHG 236 Query: 109 AC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC + + I ++++ VR Q Sbjct: 237 TPEWSSIGTAASSGCIRLMNQDIMDLYSRVRPGRNARVVVQQ 278 >gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesorhizobium loti MAFF303099] Length = 263 Score = 93.3 bits (231), Expect = 3e-18 Identities = 22/149 (14%), Positives = 39/149 (26%), Gaps = 24/149 (16%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---K 55 P P P I + E L L + Y + G G Sbjct: 79 PKFVRQIVADPTGEKPGTIVVDVSEHFLYLVRDGGKAI-----RYGVSLGKAGFGWTGSA 133 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA 109 + + P + Q P+ ++ + G + Y +HG Sbjct: 134 VVQARKKWPVWTPPPEMIQRRPELAKFKDGMPPGPQSPLGARALYLFRDGKDTMYRLHGT 193 Query: 110 C--------VSVGCYAMTDAQIDEIFAFV 130 S GC + I ++++ V Sbjct: 194 PEWDSIGKNASSGCVRFMNQDIIDLYSRV 222 >gi|75675776|ref|YP_318197.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 493 Score = 93.3 bits (231), Expect = 3e-18 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 32/153 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P P+ I + + ++++ L P+ G +P G +SV Sbjct: 104 PNGPIIIAVSIRRQTMKVYDGNG-----LFAETPVSTGMRG---------HSTPMGVFSV 149 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDE 125 + S Y P Y + T + +H G S GC M + Sbjct: 150 IQKRKWHRSNIYS----NAPMPYMQR--ITWSGIAMHAGALPGYPASHGCIRMPLDFAVK 203 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 ++ + R I P +T A+ Sbjct: 204 MWGWTRIGARV-------IITPGEVTPADFSHP 229 >gi|15073891|emb|CAC45532.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 242 Score = 92.9 bits (230), Expect = 4e-18 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 25/151 (16%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ +P I + +R L L + Y + G G + Sbjct: 90 YRQEVGDPFGEAPGTIVVDTADRYLYLVQPGGRAM-----RYGVGLGREGFAWSGRGLIQ 144 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYT-----GKYLMIHGA 109 + P+ + P Y A N G P N Y +HG Sbjct: 145 WKQKWPKWTPPNEMIARQPVLAKYSADNGGMPPGLDNPLGSRALYIFQNGQDTLYRVHGT 204 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRD 132 VS GC M + + +++ VR+ Sbjct: 205 PEWQSIGKAVSSGCVRMVNQDVIDLYDRVRN 235 >ErfK_YbiS_YhnG_Q7MFG2_93-232_PF03734.4 Length = 140 Score = 92.6 bits (229), Expect = 5e-18 Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ ++G + +P+ G +PE S++ + N Sbjct: 6 IVINLAELRLYYFEPELGK----VHVFPVGIGRVG---------RDTPEMVTSIREKRPN 52 Query: 77 PDS-------RYYLAINIGFP--------NAYD---RAHGYTGKYLMIHGAC-------- 110 P + Y I P N Y +IHG Sbjct: 53 PTWTPPASIRKEYREKGIELPKIIPAGPDNPLGEYALRLAYGSGDYLIHGTNKDFGIGLR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I+ +F+ V Sbjct: 113 VSAGCIRMEPKDIEWLFSQVDKGQRVKI 140 >gi|22958594|ref|ZP_00006262.1| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 342 Score = 92.6 bits (229), Expect = 5e-18 Identities = 27/150 (18%), Positives = 38/150 (25%), Gaps = 22/150 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + +P I I ER L K Y I G G Sbjct: 71 QTVAYTSNEAPGTIVINPRERVLYFVTGKDTAI-----RYGIAVGKEGFQWSGTAVVANR 125 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFP-NAYDRAHGY-----TGKYLMIHGAC---- 110 P + P+ + + G P N Y IHG Sbjct: 126 RHWPTWTPPPEMIDRKPELKKWEKGQPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNS 185 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V D Sbjct: 186 IGHNASSGCIRMINQDVVDLFERVPDGAKV 215 >gi|15155831|gb|AAK86651.1| AGR_C_1541p [Agrobacterium tumefaciens str. C58] Length = 328 Score = 92.6 bits (229), Expect = 5e-18 Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 25/156 (16%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGD 60 +E+ Q +P I + + L L ++ Y + G G + + Sbjct: 178 QEVSYQTAEAPGTIVVDTRQHFLYLVQSGGKAI-----RYGVGLGRDGYAWSGRGKIQWK 232 Query: 61 FQSPEGFYSVQPNQLNPD----SRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV 111 + P + + P+ S + G N Y +HG Sbjct: 233 AKWPRWTPPDEMVKRQPELTSISAANGGMTPGLNNPLGARALYIFKDGKDTLYRVHGTPD 292 Query: 112 --------SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ V Sbjct: 293 WQSVGKATSSGCVRMLNQDVIDLYERVPQGAQIVVI 328 >ErfK_YbiS_YhnG_Q97GF1_43-153_PF03734.4 Length = 111 Score = 92.6 bits (229), Expect = 6e-18 Identities = 17/132 (12%), Positives = 36/132 (27%), Gaps = 32/132 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I + ++ +++ +L+K+Y I SP G +++ Sbjct: 2 KKILIVVDVVSNRMCVFQDD-----KLLKTYTIAGGKPST---------PSPIGTWTIVG 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 + + P IHG S GC M + + Sbjct: 48 KDTWGEGFGGRWMGFNVP----------WGKYGIHGTIFPDSIGGNTSHGCIRMRNDDVR 97 Query: 125 EIFAFVRDAFVG 136 E++ Sbjct: 98 ELYKITPVGTKV 109 >gi|15073710|emb|CAC45352.1| PUTATIVE SIGNAL PEPTIDE PROTEIN [Sinorhizobium meliloti] Length = 231 Score = 92.6 bits (229), Expect = 6e-18 Identities = 21/154 (13%), Positives = 38/154 (24%), Gaps = 23/154 (14%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK-------RR 57 +++ + +P I + + L Y I G G + Sbjct: 59 KVRFRTDEAPGTIIVDTNSKYLYYIDGSNRAT-----RYGIGVGRDGFGWSGVVKVGRKA 113 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY---LMIHGAC---- 110 E +P V+ I P + Y G IHG Sbjct: 114 EWPSWTPPAEMRVRERAKGRILPITQPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWT 173 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +S GC M + ++ ++ Sbjct: 174 IGQNMSSGCIRMMNEDVEHLYERAGIGTKVVVIG 207 >gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 227 Score = 92.2 bits (228), Expect = 6e-18 Identities = 21/150 (14%), Positives = 40/150 (26%), Gaps = 21/150 (14%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRR 57 + +P I + + L Y + L G R Sbjct: 56 FRRAIVDYHRKEAPGTIVVDSDNHFLYYVLDNGKAL-----RYGVTVGEEALAFSGIARV 110 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP---NAYDRAHGYTGKYLMIHGAC---- 110 + P+ + ++ + I P A G IHG Sbjct: 111 GNMAEWPKWTPTADIHKRIEGLPSSVPGGIDNPLGARALYLYQGNKDTLFRIHGTNQPEY 170 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC MT+ + +++ V+ + Sbjct: 171 IGASISSGCIRMTNEDVIDLYNRVKMGTIV 200 >ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 Length = 110 Score = 92.2 bits (228), Expect = 6e-18 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I + + L L +++K+YPI Q+P G + + Sbjct: 3 PYHIAVSIGAKTLTLSLNN-----RVMKTYPIAVGKILT---------QTPTGEFYIINR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + ++ IHG VS GC M + + E Sbjct: 49 QRNPGGPFGAY-----------WLSLSKQHYGIHGTNNPASIGKAVSKGCIRMHNKDVIE 97 Query: 126 IFAFVRDAFVGGQ 138 + + V + Sbjct: 98 LASIVPNGTRVTI 110 >gi|71548935|ref|ZP_00669159.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 159 Score = 92.2 bits (228), Expect = 6e-18 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 47/163 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 I + +++ L +++ YPI G G ++ G F +P G + ++ Sbjct: 2 KIIVDISLQQMTL----QDVTGHIVRCYPISSAKNGTG--QQRGSFHTPLGKHIIRAKIG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 + P Y + PN D +Y Sbjct: 56 QNVPVNTVFVRRRPTGEIYTSELAANHPN-RDWILTRILWLSGCEPGFNRLGSVDTMRRY 114 Query: 104 LMIHGACVSV--------GCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG+ S GC M + + ++F V + Sbjct: 115 IYIHGSPDSAEMGKPGSIGCIRMHNHDLLDLFERVSVGTLVEI 157 >ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 Length = 114 Score = 92.2 bits (228), Expect = 7e-18 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 31/131 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + + I+ YPI + SP G + + N Sbjct: 6 ILVDISEFKMYLIEKGSN---KPIRRYPIAGGKP---------ETPSPYGTWKITSKSAN 53 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P IHG S GC M + ++E++ Sbjct: 54 WGSGFGTRWMGLNVP----------WGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELY 103 Query: 128 AFVRDAFVGGQ 138 +V + Sbjct: 104 KYVDVGTIVVI 114 >ErfK_YbiS_YhnG_Q9KIP0_82-225_PF03734.4 Length = 144 Score = 92.2 bits (228), Expect = 7e-18 Identities = 24/141 (17%), Positives = 37/141 (26%), Gaps = 24/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + ER L A Y I G G + P Sbjct: 1 ERPGTIIVNTRERFLYYILANGKAM-----RYGIGVGKQGFAWAGTAYVAWKQEWPNWHP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY------TGKYLMIHGAC--------VS 112 + PD Y+ + G N Y +HG S Sbjct: 56 PKEMAVRRPDLAKYVEDGMGPGLSNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGTAAS 115 Query: 113 VGCYAMTDAQIDEIFAFVRDA 133 GC + + + ++++ VR Sbjct: 116 SGCIRLMNQDVIDLYSRVRPG 136 >gi|15155832|gb|AAK86652.1| AGR_C_1542p [Agrobacterium tumefaciens str. C58] Length = 261 Score = 92.2 bits (228), Expect = 8e-18 Identities = 21/155 (13%), Positives = 42/155 (27%), Gaps = 25/155 (16%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + P + + R L + + Y + G G + Sbjct: 108 YRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAM-----RYGVGIGRDGFAWSGEGVIQ 162 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP----NAYDRAHGY-----TGKYLMIHGA 109 + P+ + P+ Y + N G P N Y +HG+ Sbjct: 163 WRQKWPKWTPPDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGS 222 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC + + + +++ V Sbjct: 223 PEWNSIGKAVSSGCVRLMNQDVIDLYDRVPQKARV 257 >ErfK_YbiS_YhnG_Q92K56_83-221_PF03734.4 Length = 139 Score = 91.8 bits (227), Expect = 8e-18 Identities = 24/140 (17%), Positives = 40/140 (28%), Gaps = 22/140 (15%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS---PEGFYSV 70 P I I + L L + Y I G G ++ P Sbjct: 3 PGTIIIDGNQHFLYLVQPGGQAI-----RYGIGVGREGFGWAGIVRVGRTAEWPTWTPPP 57 Query: 71 QPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA--------CVSVGCY 116 + +P++ ++ + G N Y + IHG VS GC Sbjct: 58 EMVARDPNAAKWAGGMPGGPDNPLGARALYLYEGDNDTIYRIHGTVEPWTIGLDVSSGCI 117 Query: 117 AMTDAQIDEIFAFVRDAFVG 136 M + I ++ + V Sbjct: 118 RMNNDDIIDLHSRVGVGAKV 137 >gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitrosomonas europaea ATCC 19718] Length = 182 Score = 91.8 bits (227), Expect = 8e-18 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 45/170 (26%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 S ++I I E++L + + + I G R +GD Q+P G + Sbjct: 19 SYANSDIWILIDTLEQRLSVMRGDKAQ----LAFNNIAIGRYGASSSRMKGDNQTPLGSF 74 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYL------------------------ 104 + + + RYY + FPN K + Sbjct: 75 QISWIKQHH--RYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPL 132 Query: 105 --------------MIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +H + GC A+T+AQIDE+ ++++ Sbjct: 133 GGYIGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTKVVIR 182 >gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis NCTC 9343] Length = 183 Score = 91.8 bits (227), Expect = 8e-18 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 18/136 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ----- 71 + I K+E KL L K + I G K ++GD ++PEG + + Sbjct: 44 LLISKDEMKLRLIDYKGQELFTA----DIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 98 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQI 123 + I + N + R K + IHG + GC + ++++ Sbjct: 99 SKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSEL 158 Query: 124 DEIFAFVRDAFVGGQP 139 +++ + +R Sbjct: 159 EQLVSLIRVPTTVIIT 174 >ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 Length = 135 Score = 91.8 bits (227), Expect = 9e-18 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 18/135 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ----- 71 + I K+E KL L K + I G K ++GD ++PEG + + Sbjct: 6 LLISKDEMKLRLIDYKGQELFTA----DIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 60 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQI 123 + I + N + R K + IHG + GC + ++++ Sbjct: 61 SKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSEL 120 Query: 124 DEIFAFVRDAFVGGQ 138 +++ + +R Sbjct: 121 EQLVSLIRVPTTVII 135 >gi|68189621|gb|EAN04286.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 187 Score = 91.8 bits (227), Expect = 9e-18 Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 33/161 (20%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 +E+ +P I I + L L + Y + G G + + Sbjct: 23 QEVVDPTGEAPGSIVIDTSQHFLYLVRGGGRAM-----RYGVGLGREGFAWAGRAQIDRK 77 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLA------------INIGFPNAYDRAHGY-----TGKY 103 P+ + + P+ Y + G N Y Sbjct: 78 AMWPKWHPPAEMIERQPELEKYKTEYDKATNEWRGGMEPGIMNPLGARAMYLYQDGKDTL 137 Query: 104 LMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG+ VS GC M + + +++ V + Sbjct: 138 YRIHGSPEWWSIGKSVSSGCVRMINQDVIDLYDRVPEGTPV 178 >ErfK_YbiS_YhnG_Q6N1G4_67-202_PF03734.4 Length = 136 Score = 91.4 bits (226), Expect = 1e-17 Identities = 21/139 (15%), Positives = 39/139 (28%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + + L Y + L G R + P+ Sbjct: 1 EAPGTIVVDSDNHFLYYVLDNGKAL-----RYGVTVGEEALAFSGIARVGNMAEWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP---NAYDRAHGYTGKYLMIHGAC--------VSVGCYA 117 + ++ + I P A G IHG +S GC Sbjct: 56 TADIHKRIEGLPSSVPGGIDNPLGARALYLYQGNKDTLFRIHGTNQPEYIGASISSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVG 136 MT+ + +++ V+ + Sbjct: 116 MTNEDVIDLYNRVKMGTIV 134 >ErfK_YbiS_YhnG_Q5N3Q0_79-206_PF03734.4 Length = 128 Score = 91.4 bits (226), Expect = 1e-17 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 29/136 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + +R++ +++ + I SYP+ G ++P G + V + Sbjct: 5 KLVLSLRQRRVTVYR-----DRLAIASYPVGIGKPGW---------ETPRGTFRVMSKIV 50 Query: 76 NPDS--RYYLAINIGFPN-----AYDRAHGYTGKYLMIHGA--------CVSVGCYAMTD 120 NP + ++ PN + + HG VS GC M + Sbjct: 51 NPTWQHPWNGSLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKN 110 Query: 121 AQIDEIFAFVRDAFVG 136 I +F V + + Sbjct: 111 RDIRALFELVEEGAIV 126 >gi|71837344|ref|ZP_00677109.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 441 Score = 91.4 bits (226), Expect = 1e-17 Identities = 29/163 (17%), Positives = 45/163 (27%), Gaps = 36/163 (22%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L LP +P I I +L +K Q++ +YP+ + D + Sbjct: 113 PLSFILPDAPRKGIVINLATMRLFHYKGSGTA--QVVSTYPVGVGAE---------DRPT 161 Query: 64 PEGFYSVQPNQLNPDS-------RYYL--------AINIGFPNAYDRAHGYTGK-YLMIH 107 P G V P + +I G N Y GK +IH Sbjct: 162 PPGPTRVVRKAAKPTWHVPASIAERHRMKGDILPASIPPGPDNPLGEYALYLGKAGYLIH 221 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 G + GC + I +F + Sbjct: 222 GTNKPASVGLQATNGCMRLYPENIKTLFGETPVNTPVLIVNQP 264 >ErfK_YbiS_YhnG_Q895S8_170-298_PF03734.4 Length = 129 Score = 91.4 bits (226), Expect = 1e-17 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 30/134 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I K++R L ++ + ++ K YP+ + +PEG +++ Sbjct: 4 YSMVINKDKRILTVYL-----DGKVYKKYPVAAGASPSY---------TPEGKFTIVSKL 49 Query: 75 LNPDSRYYLAI----NIGFPNAYDRAHG----YTGKYLMIHG--------ACVSVGCYAM 118 +NP N + G IHG VS+GC M Sbjct: 50 INPTWISTRTGQVISGGTPQNPLGKRWLGLSIDGGSMYGIHGSNNPWSIGTNVSLGCIRM 109 Query: 119 TDAQIDEIFAFVRD 132 + ++E+F F+ Sbjct: 110 FNNDVEELFDFIPM 123 >ErfK_YbiS_YhnG_Q8D2K2_98-234_PF03734.4 Length = 137 Score = 91.4 bits (226), Expect = 1e-17 Identities = 23/146 (15%), Positives = 43/146 (29%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS-VQPNQL 75 I I E +L + ++ + P+ G ++P + + V+ + Sbjct: 5 ILINIAEMRLFYFPKN----FEKVVVLPVGIGEIGK---------ETPSKWKTYVKRKKY 51 Query: 76 NPDS-------RYYLAINIG----FP----NAYDRAHGYTGKYLMIHGAC--------VS 112 P + Y ++ I +P N Y IHG V+ Sbjct: 52 APTWTPTKDMHKEYSSLGIKLLKIYPSGKNNPMGLYALYLEDLYAIHGTNTNFGIGLRVT 111 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I +F V Sbjct: 112 HGCIRLRNDDIKYLFNNVPVGTEVYF 137 >gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermotoga maritima MSB8] Length = 395 Score = 91.4 bits (226), Expect = 1e-17 Identities = 30/155 (19%), Positives = 48/155 (30%), Gaps = 30/155 (19%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + +PV I + KL L+ + L+K YP+ +P G Sbjct: 256 RVYFRENPVTIVVNLFSSKLALYY-----DGVLLKVYPVALGRSDA----------TPPG 300 Query: 67 FYSVQPNQLNPDSRY---YLAINIGFPNAYDRAHGYTGKYLMIHGA--CV------SVGC 115 Y V +++P + Y++ R + IHG S GC Sbjct: 301 RYWVLRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYAIHGTSKPWEIGKRISHGC 360 Query: 116 YAMTDAQIDEIFAFVRDAFVG----GQPSVQVSIY 146 M + ++EI AF IY Sbjct: 361 IRMFNRDVEEIDAFAGVGTEVVVVKEDKEFPERIY 395 >ErfK_YbiS_YhnG_Q55604_71-200_PF03734.4 Length = 130 Score = 91.0 bits (225), Expect = 1e-17 Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 31/139 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ERK+ ++ +++ SYP+ G ++P+G + V N Sbjct: 6 IVLVLGERKVYAYQND-----KVLASYPVAVGKKGW---------ETPQGNFQVIQMVEN 51 Query: 77 PDSRYY-------LAINIGFPNAYDRAHGYTGKYLMIHGAC----------VSVGCYAMT 119 P +++ + + HG S GC M Sbjct: 52 PVWENPWNGKKVAASLDGPIGIRWIGFWSDGKNTIGFHGTPKKHEHFLGTAASHGCVRMR 111 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +F V++ Sbjct: 112 NQDVVALFNMVQNGTPVRV 130 >ErfK_YbiS_YhnG_Q92KL9_66-205_PF03734.4 Length = 140 Score = 91.0 bits (225), Expect = 1e-17 Identities = 21/143 (14%), Positives = 34/143 (23%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK-------RREGDFQSP 64 +P I + + L Y I G G + E +P Sbjct: 1 EAPGTIIVDTNSKYLYYIDGSNRAT-----RYGIGVGRDGFGWSGVVKVGRKAEWPSWTP 55 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY---LMIHGAC--------VSV 113 V+ I P + Y G IHG +S Sbjct: 56 PAEMRVRERAKGRILPITQPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTIGQNMSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC M + ++ ++ Sbjct: 116 GCIRMMNEDVEHLYERAGIGTKV 138 >gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobacillus kaustophilus HTA426] Length = 168 Score = 91.0 bits (225), Expect = 1e-17 Identities = 24/142 (16%), Positives = 41/142 (28%), Gaps = 28/142 (19%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 + + + K KL L + + ++ YP+ +PEG ++V Sbjct: 23 AEAKPLVIVNKAINKLALVR-----DGRIEAVYPVATGVNA---------DLTPEGMFTV 68 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCY 116 P R N G G+ IHG VS GC Sbjct: 69 TVKAKYPYYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQYVSQGCV 128 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M + ++ ++ V Sbjct: 129 RMHNRDVEHLYERVPIGANVLI 150 >gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 221 Score = 91.0 bits (225), Expect = 2e-17 Identities = 21/150 (14%), Positives = 39/150 (26%), Gaps = 21/150 (14%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRR 57 + +P I + + L Y + L G R Sbjct: 56 FRRAIVDYHRKEAPGSILVDSDNHYLYYVLDNGKAI-----RYGVTVGEEALAFSGIARV 110 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP---NAYDRAHGYTGKYLMIHGAC---- 110 + P+ + ++ +A P A G IHG Sbjct: 111 GNKREWPDWIPTADIHKRMGGLPSRVAGGPDNPLGARALYLYQGSKDTLFRIHGTNQPEY 170 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC MT+ +++ V+ + Sbjct: 171 IGTSISSGCIRMTNEDAIDLYDRVKVGTMV 200 >gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A Resolution Length = 164 Score = 91.0 bits (225), Expect = 2e-17 Identities = 23/133 (17%), Positives = 40/133 (30%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I + + L L ++ K+YPI Q+P G + + Sbjct: 55 PYHIAVSIGAKTLTLSLNN-----RVXKTYPIAVGKILT---------QTPTGEFYIINR 100 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + + IHG VS GC + + E Sbjct: 101 QRNPGGPFGAY-----------WLSLSAAHYGIHGTNNPASIGKAVSKGCIRXHNKDVIE 149 Query: 126 IFAFVRDAFVGGQ 138 + + V + Sbjct: 150 LASIVPNGTRVTI 162 >gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesorhizobium loti MAFF303099] Length = 277 Score = 91.0 bits (225), Expect = 2e-17 Identities = 28/162 (17%), Positives = 47/162 (29%), Gaps = 29/162 (17%) Query: 3 SKELKQQLP----GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 + L+Q +P P I + L L + Y + G G Sbjct: 80 PQFLRQIVPDPTGQKPGTIIVDTTGHFLYLVRPGGQAI-----RYGVGLGRAGFEWSGDA 134 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYT-----GKYLMI 106 + + P+ + P+ + Y A N G P N Y + Sbjct: 135 VVQWKQKWPKWTPPDEMIARQPELKPYSADNGGMPGGLKNPLGARALYLFQGNVDTLYRL 194 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 HG+ VS GC + + I +++ V S Sbjct: 195 HGSPEWKSIGKSVSSGCVRLMNQDIIDLYDRVPSKTPVIVTS 236 >gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 91.0 bits (225), Expect = 2e-17 Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 45/174 (25%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 +++ I E L++++ ++ + P+ GG R++G +P Sbjct: 23 PSAMAADDEIWVLIDDREATLDIYRGDT----RIERFEPVSLGRGGTARVRKQGSNMTPT 78 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFP-----------------------NAYDRAHGYT-- 100 G + + ++N +S++ + + + +P +AY R Sbjct: 79 GEFHIN--RINRESKFNIFLGLDYPKLETAREAMRAGLMSPAEYADFQDAYYRNGAPPQD 136 Query: 101 ---GKYLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 G Y+ IHG + GC A+T+ QI+E+ V Sbjct: 137 TVLGGYIGIHGLGASDPDIHRRFHWTEGCVAVTNPQIEELTRLVSIGTRVVIRG 190 >ErfK_YbiS_YhnG_Q98JD1_93-231_PF03734.4 Length = 139 Score = 90.6 bits (224), Expect = 2e-17 Identities = 23/142 (16%), Positives = 37/142 (26%), Gaps = 22/142 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ---SPEGFY 68 P I I + L L + Y I G G + P Sbjct: 1 EQPGTIIIDGNQHFLYLVQPGQQAI-----RYGIGVGRDGFGWAGIVKVGRMAEWPTWTP 55 Query: 69 SVQPNQLNPD-SRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVG 114 + +P + + G N Y + IHG VS G Sbjct: 56 PAEMVARDPKARPWANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEPWTIGLDVSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C M + I ++ + ++ Sbjct: 116 CIRMNNGDIIDLHSRIKVGAKV 137 >ErfK_YbiS_YhnG_Q98C34_66-204_PF03734.4 Length = 139 Score = 90.6 bits (224), Expect = 2e-17 Identities = 19/142 (13%), Positives = 38/142 (26%), Gaps = 22/142 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + + + L + Y I G G + P Sbjct: 1 EKPGTIIVDTQNKFLYFVEDDGRAI-----RYGIGVGREGFEWHGTAHIALKREWPTWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY---TGK--YLMIHGAC--------VSVG 114 + + P+ ++ + G N Y G +HG+ +S G Sbjct: 56 PREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNSIGKAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C + + I +++ Sbjct: 116 CIRLMNQDIIDLYDRTSVGAKV 137 >gi|39936101|ref|NP_948377.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 537 Score = 90.6 bits (224), Expect = 2e-17 Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 32/159 (20%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 E + P PV I + E++KL ++ A L P+ G +P Sbjct: 93 EKQATKPQGPVVIAVSIEQQKLRVYDANG-----LFAETPVSTGMRG---------HSTP 138 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMT 119 G +SV S Y + + + +H G S GC M Sbjct: 139 MGVFSVIQKSKYHRSNIYSGAPMPYMQRITW------SGIALHAGALPGYPASHGCIRMP 192 Query: 120 DAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 +++ + R + P +T + Sbjct: 193 MTFAVKMWGWTRMGARV-------IVAPGDVTPVSFSHP 224 >ErfK_YbiS_YhnG_Q818U5_25-151_PF03734.4 Length = 127 Score = 90.6 bits (224), Expect = 2e-17 Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 28/137 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + K KL + ++ K +P+ + +PEG + V Sbjct: 5 FIIVNKATNKLAYID-----DGKIQKVFPVATGK---------TNELTPEGTFDVVMKAK 50 Query: 76 NPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCYAMTDA 121 +P N G G IHG +S GC M Sbjct: 51 DPYYIAKDIPGGSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKN 110 Query: 122 QIDEIFAFVRDAFVGGQ 138 ++ +F + Sbjct: 111 DVEYLFDRIPIGTKVWI 127 >ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 Length = 160 Score = 90.3 bits (223), Expect = 2e-17 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 47/167 (28%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREGDFQSPEGFYSV 70 ++ + + L++ + ++ + I G G +R D ++P G Y + Sbjct: 1 NPDPWLLVETKPHVLKVMQGD-----TPVEVFTKIAIGQHGAGVDKRRNDNKTPLGEYRI 55 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHG----------------------------YTGK 102 +N +S+++ + +PN G G Sbjct: 56 GW--INENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQDTPLGG 113 Query: 103 YLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG + GC A+T+ QID++ +VR + Sbjct: 114 QIGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTLVVI 160 >gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666] Length = 176 Score = 90.3 bits (223), Expect = 2e-17 Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 48/168 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + I + ++ L L+ L+++YP+ G G EG +P G + ++ Sbjct: 4 IRILVSLHDQALRLYCG-----GVLVRAYPVSTARNGPG--ELEGSACTPRGAHVIRAKI 56 Query: 74 -----------QLNPDSRYYLAINIGFPNA-YDRAHGY-------------------TGK 102 P + + N D + Sbjct: 57 GAGCEAGTVFVARRPTGEM-FSAGLAEANPDRDWILTRILWLCGREPGKNRFGAVDTMRR 115 Query: 103 YLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 Y+ IHG S+GC M +A I E+F V + Sbjct: 116 YIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQAGP 163 >ErfK_YbiS_YhnG_Q6N3T2_113-244_PF03734.4 Length = 132 Score = 90.3 bits (223), Expect = 2e-17 Identities = 21/137 (15%), Positives = 37/137 (27%), Gaps = 19/137 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I + L Y + G G ++ + P+ Sbjct: 1 EPAGTIVVDTANTHLYYVLGNGRAI-----RYGVRVGRDGFTWNGVQKISRKAEWPDWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSVGCYAMT 119 + + P ++A G N Y G + IHG VS GC M Sbjct: 56 PAEMIERQPYLPRFMAGGPG--NPMGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGML 113 Query: 120 DAQIDEIFAFVRDAFVG 136 + + ++F + Sbjct: 114 NDDVSDLFERAKVGTRV 130 >gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426] Length = 165 Score = 90.3 bits (223), Expect = 2e-17 Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 36/141 (25%) Query: 10 LPGS---PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 LP P I I R+L L + I++YPI +P G Sbjct: 49 LPPKGSIPYTIHISISRRQLTL-----KHRGRTIRTYPIGVGKMVTA---------TPVG 94 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAM 118 + + Q NP + + + IHG VS GC M Sbjct: 95 DFVIVNRQPNPGGPFGA-----------MWLSLSKVHYGIHGTNDPSSIGKYVSKGCIRM 143 Query: 119 TDAQIDEIFAFVRDAFVGGQP 139 + + E+ + V + Sbjct: 144 HNKDVLELASIVPNGTEVFIR 164 >gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synechocystis sp. PCC 6803] Length = 204 Score = 90.3 bits (223), Expect = 2e-17 Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 31/140 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ERK+ ++ +++ SYP+ G ++P+G + V N Sbjct: 76 IVLVLGERKVYAYQND-----KVLASYPVAVGKKGW---------ETPQGNFQVIQMVEN 121 Query: 77 PDSRYY-------LAINIGFPNAYDRAHGYTGKYLMIHGAC----------VSVGCYAMT 119 P +++ + + HG S GC M Sbjct: 122 PVWENPWNGKKVAASLDGPIGIRWIGFWSDGKNTIGFHGTPKKHEHFLGTAASHGCVRMR 181 Query: 120 DAQIDEIFAFVRDAFVGGQP 139 + + +F V++ Sbjct: 182 NQDVVALFNMVQNGTPVRVV 201 >ErfK_YbiS_YhnG_Q8YS14_144-270_PF03734.4 Length = 127 Score = 90.3 bits (223), Expect = 3e-17 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 29/135 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R+ ++ + +I SYPI G ++P G ++V + + Sbjct: 5 VVVDLSDRRTYVYAGDI-----VIASYPIAIGKRGW---------ETPTGTFNVSHMEHD 50 Query: 77 PDSRYYLAINI-------GFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDA 121 P R+ + I + + HG S GC M ++ Sbjct: 51 PIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGTAISHGCLRMRNS 110 Query: 122 QIDEIFAFVRDAFVG 136 + ++ V Sbjct: 111 DVRLLYDQVELGTPV 125 >gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 186 Score = 90.3 bits (223), Expect = 3e-17 Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 29/153 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ + G P +I + K KL + ++ K P+ + Sbjct: 15 PLWPLGENPRAGDP-FIIVNKATNKLAYID-----DGKIQKVSPVATGK---------TN 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC---- 110 +PEG + V +P N G G IHG Sbjct: 60 ELTPEGTFDVVMKAKDPYYIAKDIPGGSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSS 119 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC M ++ +F + Sbjct: 120 IGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIV 152 >ErfK_YbiS_YhnG_Q7N3U7_93-232_PF03734.4 Length = 140 Score = 90.3 bits (223), Expect = 3e-17 Identities = 24/148 (16%), Positives = 34/148 (22%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + + YPI G +P SV + Sbjct: 6 IVINLAELRLYYFPKGKNN----VIVYPIGIGQLG---------RNTPVMTTSVSQLIKD 52 Query: 77 PDSRYY------------------LAINIGFPNAYDRAHGYTGKYLMIHGAC-------- 110 P A A+ +IHG Sbjct: 53 PTWTPTKNIRKHYAEQGVILPAVVPAGPENPMGAFALRLAAGRGEYLIHGTNADFGIGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + I+ +F V Sbjct: 113 VSSGCIRLRPDDIETLFNAVPRGTRVQI 140 >gi|29654868|ref|NP_820560.1| LysM domain protein [Coxiella burnetii RSA 493] Length = 314 Score = 89.9 bits (222), Expect = 3e-17 Identities = 25/197 (12%), Positives = 46/197 (23%), Gaps = 48/197 (24%) Query: 5 ELKQQLPGSP-VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P I I +L + +YP+ ++ + Sbjct: 83 PTQYLLPPVPKEGIVINLAAMRLYYFPKGKN----YFYTYPVGIGR---------FNWST 129 Query: 64 PEGFYSVQPNQLNP--------------DSRYYLAINIGFP-NAYDRAHGY-TGKYLMIH 107 P G + NP + + P N + +IH Sbjct: 130 PLGKLHIIQKIKNPVWVVPDSILRYRQENGDPVPKMMPSGPENPLGYYALRLSQPTYLIH 189 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G S GC + I +F V + + ++ Sbjct: 190 GTNDPSSVGRRSSAGCIHLYPEDIKALFGMVSVDTPVLIINQPYVVG----------QND 239 Query: 160 NSPNYDFWKQLKPGYDY 176 + LK + Sbjct: 240 GKLYLEAHLPLKEDHKE 256 >DUF949_Q83CG1_72-171_PF06104.2 Length = 100 Score = 89.9 bits (222), Expect = 3e-17 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 9/103 (8%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 +FK +++LW G ++ I+S+PI SGG GPK +GD Q PEG Y + NP Sbjct: 1 VFKNSHRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPA 57 Query: 79 SRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGC 115 SR+ L++ + +PN+ DR + G + IHG+ S+GC Sbjct: 58 SRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGC 100 >gi|53802376|ref|YP_112943.1| LysM domain protein [Methylococcus capsulatus str. Bath] Length = 434 Score = 89.9 bits (222), Expect = 3e-17 Identities = 29/163 (17%), Positives = 48/163 (29%), Gaps = 36/163 (22%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ LP +P + I +L + AK +I +YP+ G + Sbjct: 94 PLQFTLPDAPRKGMVINLATMRLYHFPAKAAEG--VISTYPVGIGKEG---------RST 142 Query: 64 PEGFYSVQPNQLNPDSRYY---------------LAINIGFPNAYDRAHGY-TGKYLMIH 107 P G+ +V P A++ G N Y + +IH Sbjct: 143 PTGYMTVVRKTEFPTWYPTENIRRDHALKGDPLPPAVSPGPDNPLGDYAMYLSRPQYLIH 202 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 G S GC + I +F V+ + Sbjct: 203 GTNKPYSIGFRASNGCIRLYPEDIAAVFPEVKPGAAVRIVNQP 245 >gi|68270035|ref|ZP_00576285.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073] Length = 332 Score = 89.9 bits (222), Expect = 4e-17 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 39/161 (24%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG + I I E L + + ++ + YP+ SP G + + Sbjct: 138 PGKNLKIVIDTERLVLTIL-----VDGRVFQKYPVAIGKY---------TSPSPVGEWKI 183 Query: 71 QPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 + + + P IHG S GC+ M + Sbjct: 184 VDKAYESGGAFGTRWMGLNVP----------WGNYGIHGTNRPWSIGWAASAGCFRMFNE 233 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP 162 I+ I+ ++ P+ M ++ + SP Sbjct: 234 DIETIYPWIPVGTPVVVKG------PYTMPTGPLKPGQGSP 268 >ErfK_YbiS_YhnG_Q92KJ2_100-241_PF03734.4 Length = 142 Score = 89.9 bits (222), Expect = 4e-17 Identities = 26/141 (18%), Positives = 42/141 (29%), Gaps = 25/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + +R L L + Y + G G + + P+ Sbjct: 1 EAPGTIVVDTADRYLYLVQPGGRAM-----RYGVGLGREGFAWSGRGLIQWKQKWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYT-----GKYLMIHGAC--------V 111 + P Y A N G P N Y +HG V Sbjct: 56 PNEMIARQPVLAKYSADNGGMPPGLDNPLGSRALYIFQNGQDTLYRVHGTPEWQSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRD 132 S GC M + + +++ VR+ Sbjct: 116 SSGCVRMVNQDVIDLYDRVRN 136 >ErfK_YbiS_YhnG_Q8UH41_160-301_PF03734.4 Length = 142 Score = 89.5 bits (221), Expect = 4e-17 Identities = 20/145 (13%), Positives = 39/145 (26%), Gaps = 25/145 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 +P I + + L L ++ Y + G G + + + P Sbjct: 1 EAPGTIVVDTRQHFLYLVQSGGKAI-----RYGVGLGRDGYAWSGRGKIQWKAKWPRWTP 55 Query: 69 SVQPNQLNPD----SRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGACV-------- 111 + + P+ S + G N Y +HG Sbjct: 56 PDEMVKRQPELTSISAANGGMTPGLNNPLGARALYIFKDGKDTLYRVHGTPDWQSVGKAT 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + +++ V Sbjct: 116 SSGCVRMLNQDVIDLYERVPQGAQI 140 >ErfK_YbiS_YhnG_Q8G317_66-204_PF03734.4 Length = 139 Score = 89.5 bits (221), Expect = 4e-17 Identities = 23/142 (16%), Positives = 39/142 (27%), Gaps = 22/142 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + E+ L L ++ Y I G G R + P Sbjct: 1 EKPGTIIVDTREKFLYLIMSEGKAV-----RYGIGVGRRGFEWSGTARVAMKREWPTWTP 55 Query: 69 SVQPNQLNPDSRYYL-AINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVG 114 + P+ Y ++ G N Y +HG +S G Sbjct: 56 PSAMIKRQPELAKYRNGMDPGLRNPLGARALYLYNKGGDTGYRLHGTPEWWSIGKAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C + + I +++ V Sbjct: 116 CIRLMNQDIIDLYNRVEQGAKV 137 >ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 Length = 110 Score = 89.5 bits (221), Expect = 5e-17 Identities = 25/133 (18%), Positives = 40/133 (30%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I R+L L + I++YPI +P G + + Sbjct: 3 PYTIHISISRRQLTL-----KHRGRTIRTYPIGVGKMVTA---------TPVGDFVIVNR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + + IHG VS GC M + + E Sbjct: 49 QPNPGGPFGA-----------MWLSLSKVHYGIHGTNDPSSIGKYVSKGCIRMHNKDVLE 97 Query: 126 IFAFVRDAFVGGQ 138 + + V + Sbjct: 98 LASIVPNGTEVFI 110 >gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099] Length = 505 Score = 89.5 bits (221), Expect = 5e-17 Identities = 27/152 (17%), Positives = 42/152 (27%), Gaps = 35/152 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K ++++ + A +L+ +YP S D SP G ++V Sbjct: 359 PVARIVADKTKKEVYAYDAS----GKLVAAYPATIGSA---------DTPSPTGIHAVSR 405 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 L+P+ Y L I G IHG Sbjct: 406 IALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKT 465 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC +T+ E+ V Sbjct: 466 ESHGCVRLTNWDARELAKLVSPGVTVEFVGGP 497 >gi|66856700|ref|ZP_00400762.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C] Length = 284 Score = 89.5 bits (221), Expect = 5e-17 Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 19/144 (13%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICK----WSGGLGPKRREGDFQSPEGFYSV 70 + + E +L A G + ++P+ + LG E SP + + Sbjct: 87 GTVVVNLSEMRLYYLPAGPGP----LLTFPVGVAVEAGATPLGVLTVEQKLVSPSWYPTP 142 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDA 121 + +P+ A+ G N + L+IHG VS GC + Sbjct: 143 AIRREDPELP--AAVPPGPDNPLGSHALRLSAPTLLIHGTNRPYGVGRRVSHGCIRLYPE 200 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSI 145 I + VR V + Sbjct: 201 DIPRLHRAVRLGTPVAIVREPVKV 224 >ErfK_YbiS_YhnG_Q606Y7_79-237_PF03734.4 Length = 159 Score = 89.1 bits (220), Expect = 5e-17 Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 48/162 (29%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++LEL +A +++ Y + G+G KR G +P G++ V+ Sbjct: 4 DFLHISVPRQRLELIEA-----GKVVAHYRVSTAKNGVGEKR--GSECTPRGWHRVRAKI 56 Query: 74 -----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGK 102 P Y + P D + Sbjct: 57 GAGLPAGAVLVGRRPTGEIYTPLLAARHPG-RDWILSRILWLGGLQPGFNRYGEVDTAWR 115 Query: 103 YLMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 Y+ IHG S GC +T A + ++F V + Sbjct: 116 YIYIHGSPDDGVDGTPQSHGCIRLTSADVIDLFDRVPVGALV 157 >gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 160 Score = 89.1 bits (220), Expect = 6e-17 Identities = 28/161 (17%), Positives = 46/161 (28%), Gaps = 47/161 (29%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 I + + L L L+K YP+ G G ++ + +P G + V+ Sbjct: 2 KIEVSIPLQILRL----SDDAGHLLKEYPVSTALNGPGEQKDS--YCTPRGRHIVRAKIG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 P + A++ P D +Y Sbjct: 56 AGQPLGAVFRGRRPTGEVWTPALHAQHPG-RDWILTRILWLSGCEPGFNRLGNVDSMQRY 114 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVG 136 + IHG S GC M +A + E+F V Sbjct: 115 IYIHGTPECEPMGEAHSHGCIRMRNADVRELFDLVPVNTQV 155 >ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 Length = 160 Score = 88.7 bits (219), Expect = 7e-17 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 45/166 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S ++I I E++L + + + I G R +GD Q+P G + + Sbjct: 1 NSDIWILIDTLEQRLSVMRGDKAQ----LAFNNIAIGRYGASSSRMKGDNQTPLGSFQIS 56 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYL--------------------------- 104 + + RYY + FPN K + Sbjct: 57 WIKQHH--RYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPLGGY 114 Query: 105 -----------MIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +H + GC A+T+AQIDE+ ++++ Sbjct: 115 IGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTKVVI 160 >gi|69926541|ref|ZP_00624012.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 354 Score = 88.7 bits (219), Expect = 7e-17 Identities = 23/145 (15%), Positives = 42/145 (28%), Gaps = 19/145 (13%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 +E+ P + + L Y + G G ++ Sbjct: 156 QEVTFATKEPPGTLVVDTSNTYLYYILGNNRAI-----RYGVRVGRDGFTWAGVQKISRK 210 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------V 111 + P+ + + P ++A G N Y G + IHG V Sbjct: 211 AEWPDWHPPTEMIERQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNQPSTIGKFV 268 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V+ Sbjct: 269 SSGCIGMLNEDVSDLFDRVKVGTRV 293 >gi|46192110|ref|ZP_00007275.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 284 Score = 88.7 bits (219), Expect = 7e-17 Identities = 26/153 (16%), Positives = 43/153 (28%), Gaps = 23/153 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRRE 58 V +E+ P I + R L L + Y I G G Sbjct: 92 VRREVDYFTDQPPGTIVVDPYARYLYLVQPGQRAL-----RYAIAVGREGRGFSGEAVIP 146 Query: 59 GDFQSPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAHGYTGK-----YLMIHGACV 111 + P + +P+ + ++ G N Y + Y IHG Sbjct: 147 IKREWPRWIPTKSMIAEDPEQYGPWKDGMDGGLSNPLGARALYLHRDGKDTYYRIHGTND 206 Query: 112 --------SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC + + I +++A V Sbjct: 207 VSSIGKATSAGCIRLWNQDILDLYARVSLGTQV 239 >gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 160 Score = 88.7 bits (219), Expect = 8e-17 Identities = 25/165 (15%), Positives = 47/165 (28%), Gaps = 47/165 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 +++ + + + + YP+ G+G G +Q+P G + ++ Sbjct: 2 KLQVSVARQLMSVIDD----AGTTLHEYPVSTALAGVG--EVSGSYQTPRGRHIIRAKIG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 + P + + FP+ D +Y Sbjct: 56 GGLPENAVFVRRRPTGEIWTPELGEQFPD-RDWILTRILWLSGCEPGCNRLGCVDTMRRY 114 Query: 104 LMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + IHG S GC M +A I E+F V Sbjct: 115 IYIHGCPDSSEIGSPGSHGCIRMRNADIVELFDLVPCYTEVEITE 159 >gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesorhizobium loti MAFF303099] Length = 196 Score = 88.3 bits (218), Expect = 1e-16 Identities = 24/142 (16%), Positives = 39/142 (27%), Gaps = 25/142 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 P I I K E+ L L + Y I G G + + P+ Sbjct: 60 EQPGTIIIRKSEKALYLVTRQGQAL-----RYQISVGRDGFGWTGVVKVGAKTEWPQWRP 114 Query: 69 SVQPNQLNPDSRYYLAINIGFP-NAYDRAHGY-----TGKYLMIHGACV--------SVG 114 + P+ + P N Y IHG + G Sbjct: 115 PREMRARQPELP---ELVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGVGFDGTSG 171 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C+ +T+ + ++F V Sbjct: 172 CFRLTNTDVIDLFKRVPVGTKV 193 >gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 429 Score = 88.3 bits (218), Expect = 1e-16 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 15/134 (11%) Query: 14 PVYIR-IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I + K ++ +++ L ++P G K EGD ++PEG Y ++ Sbjct: 42 PRRILAVDKNHQRFLIFE--RHSPLALRGTFPCTTGQAD-GDKVAEGDLRTPEGIYFIEG 98 Query: 73 NQLNPDSRYYLAINI----GFPNAYDRAHGYTGKYLMIHG-----AC-VSVGCYAMTDAQ 122 Y L I +PN DR +G + IH + GC A+ Sbjct: 99 K-RTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGD 157 Query: 123 IDEIFAFVRDAFVG 136 ID + + Sbjct: 158 IDALAGTLAPGTPV 171 >ErfK_YbiS_YhnG_Q92TA3_134-276_PF03734.4 Length = 143 Score = 87.9 bits (217), Expect = 1e-16 Identities = 22/141 (15%), Positives = 36/141 (25%), Gaps = 24/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + R L Y I G G + P Sbjct: 1 ERPGTIVVNTPSRFLYYVLPGGKAV-----RYGIGVGKQGFAWEGEAYVAWKQEWPTWHP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY------TGKYLMIHGAC--------VS 112 + + P+ Y+ + G N Y +HG S Sbjct: 56 PKEMAERKPEVARYVEAGMGPGISNPLGARALYLFNKEGRDTLFRLHGTPEWSSIGTAAS 115 Query: 113 VGCYAMTDAQIDEIFAFVRDA 133 GC + + I ++++ VR Sbjct: 116 SGCIRLMNQDIMDLYSRVRPG 136 >gi|39936673|ref|NP_948949.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 294 Score = 87.9 bits (217), Expect = 1e-16 Identities = 22/145 (15%), Positives = 40/145 (27%), Gaps = 19/145 (13%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 +E+ I + L Y + G G ++ Sbjct: 105 QEVDFATKEPAGTIVVDTANTHLYYVLGNGRAI-----RYGVRVGRDGFTWNGVQKISRK 159 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------V 111 + P+ + + P ++A G N Y G + IHG V Sbjct: 160 AEWPDWHPPAEMIERQPYLPRFMAGGPG--NPMGARAMYLGSTVYRIHGTNQPSTIGKFV 217 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F + Sbjct: 218 SSGCIGMLNDDVSDLFERAKVGTRV 242 >ErfK_YbiS_YhnG_Q88KH0_95-232_PF03734.4 Length = 138 Score = 87.9 bits (217), Expect = 1e-16 Identities = 24/151 (15%), Positives = 40/151 (26%), Gaps = 37/151 (24%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I I E ++ + ++ ++P+ G G SP + Sbjct: 1 GPREGIVINLAEYRMYYFPKGES----VVYTFPLGIGREGWG---------SPIANTRIT 47 Query: 72 PNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV---- 111 NP +I G N G +IHG+ Sbjct: 48 AKTPNPTWTPPASIRKEHAEDGDILPTVVPAGPDNPLGPFKFTLGVPGYLIHGSNKKFGI 107 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC+ M + + E+ V Sbjct: 108 GMRTSHGCFRMFNNNVLELSKMVPVGTPVRI 138 >ErfK_YbiS_YhnG_Q5KXE9_24-150_PF03734.4 Length = 127 Score = 87.9 bits (217), Expect = 1e-16 Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 28/141 (19%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + + + K KL L + + ++ YP+ +PEG ++V Sbjct: 1 EAKPLVIVNKAINKLALVR-----DGRIEAVYPVATGVNA---------DLTPEGMFTVT 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCYA 117 P R N G G+ IHG VS GC Sbjct: 47 VKAKYPYYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQYVSQGCVR 106 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + ++ ++ V Sbjct: 107 MHNRDVEHLYERVPIGANVLI 127 >ErfK_YbiS_YhnG_Q9KNA7_90-229_PF03734.4 Length = 140 Score = 87.9 bits (217), Expect = 1e-16 Identities = 26/148 (17%), Positives = 40/148 (27%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ G + +P+ G +P S+ + Sbjct: 6 IVINLAELRLYYFRPNEGK----VHIFPVGIGRIG---------RDTPVMQTSISSKRKY 52 Query: 77 PDS-------RYYLAINIGFP--------NAYDRAHG---YTGKYLMIHGAC-------- 110 P + Y A I P N Y +IHG Sbjct: 53 PTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIHGTNKDFGVGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I+ ++ V Sbjct: 113 VSAGCIRMDPKDIEWLYQQVERGEKVRI 140 >ErfK_YbiS_YhnG_Q6LJB5_89-230_PF03734.4 Length = 142 Score = 87.9 bits (217), Expect = 1e-16 Identities = 25/149 (16%), Positives = 36/149 (24%), Gaps = 39/149 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + + ++ +PI G +P V N Sbjct: 6 IIINLAELRLYYFPED---DKSIVYIFPIGIGRVG---------RATPNMITKVSQKIEN 53 Query: 77 PDSRYY-------------------LAINIGFPNAYDRAHGYTGKYLMIHGAC------- 110 P A Y Y+ +IHG Sbjct: 54 PTWTPTANIRKEYREKKDIELPAVVPAGPENPLGEYAMRLAYSRGEYLIHGTNKDFGIGM 113 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I+ +F V Sbjct: 114 RVSSGCIRMNPWDIEWLFPQVPRGTSVQI 142 >gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 371 Score = 87.6 bits (216), Expect = 2e-16 Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 19/145 (13%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 KE+ I + L Y + G G ++ Sbjct: 183 KEVSFSTKEPAGTIVVDTSNTHLYYVLGNNRAI-----RYGVRVGRDGFTWAGVQKISRK 237 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------V 111 + P+ + + P ++A G N Y G + IHG V Sbjct: 238 AEWPDWHPPTEMIERQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNQPSTIGKFV 295 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V+ Sbjct: 296 SSGCIGMLNEDVSDLFDRVKVGTRV 320 >gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Bradyrhizobium japonicum USDA 110] Length = 353 Score = 87.6 bits (216), Expect = 2e-16 Identities = 28/158 (17%), Positives = 42/158 (26%), Gaps = 35/158 (22%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + P + + K + ++L+ LI YP S D SP Sbjct: 206 SAGEGAPAKADRVEVDKVRQTVKLFDKSN----ALIGFYPATVGSE---------DKPSP 252 Query: 65 EGFYSVQPNQLNPDSRYYLAIN-------------IGFPNAYDRAHGY-TGKYLMIHGAC 110 G V NP RY A + G N + + IHG Sbjct: 253 SGTLKVTEVSKNPLYRYNPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAEGYGIHGTP 312 Query: 111 V--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ + + V Sbjct: 313 SPDKISKAESHGCVRLTNWDAERVAGSVAKGTPVAFVE 350 >gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbiobacterium thermophilum IAM 14863] Length = 354 Score = 87.6 bits (216), Expect = 2e-16 Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 28/151 (18%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ----SPEG 66 P P I + K L ++ + +L+++ + GP ++ +P G Sbjct: 206 PPEPTVIVVDKGLNVLWYYE-----DGELVQTARVSTGRHVAGPAPSPDNWTENLLTPTG 260 Query: 67 FYSVQPNQLNPDSRYYLAI--NIGFPNAYDRAH-------GYTGKYLMIHGACV------ 111 ++V + P YY + N G G IHG Sbjct: 261 RFTVTL--MVPGMPYYKEGIDALDPANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALGR 318 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S G M++ ++++++ V + Sbjct: 319 WNSEGSIVMSNGEVEQLYERVELGTPVIITN 349 >ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 Length = 123 Score = 87.2 bits (215), Expect = 2e-16 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +PV I + KL L+ + L+K YP+ +P G Y V Sbjct: 1 ENPVTIVVNLFSSKLALYY-----DGVLLKVYPVALGRSDA----------TPPGRYWVL 45 Query: 72 PNQLNPDSRY---YLAINIGFPNAYDRAHGYTGKYLMIHGA--CV------SVGCYAMTD 120 +++P + Y++ R + IHG S GC M + Sbjct: 46 RKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYAIHGTSKPWEIGKRISHGCIRMFN 105 Query: 121 AQIDEIFAFVRDAFVG 136 ++EI AF Sbjct: 106 RDVEEIDAFAGVGTEV 121 >ErfK_YbiS_YhnG_Q985K6_93-234_PF03734.4 Length = 142 Score = 87.2 bits (215), Expect = 2e-16 Identities = 24/145 (16%), Positives = 40/145 (27%), Gaps = 25/145 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + L L + Y + G G + + P+ Sbjct: 1 QKPGTIIVDTTGHFLYLVRPGGQAI-----RYGVGLGRAGFEWSGDAVVQWKQKWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYT-----GKYLMIHGAC--------V 111 + P+ + Y A N G P N Y +HG+ V Sbjct: 56 PDEMIARQPELKPYSADNGGMPGGLKNPLGARALYLFQGNVDTLYRLHGSPEWKSIGKSV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC + + I +++ V Sbjct: 116 SSGCVRLMNQDIIDLYDRVPSKTPV 140 >gi|17933973|ref|NP_530763.1| hypothetical protein Atu0048 [Agrobacterium tumefaciens str. C58] Length = 261 Score = 87.2 bits (215), Expect = 2e-16 Identities = 23/149 (15%), Positives = 38/149 (25%), Gaps = 26/149 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + +R L + Y I G G + P Sbjct: 117 ERPGTIIVNTRDRYLYYIMSGNRAV-----RYGIGVGKAGFAWAGEAYVAWKQEWPMWHP 171 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC--------VS 112 + P+ Y+ + G N Y IHG+ S Sbjct: 172 PKEMADRKPEVAKYVEAGMGPGLSNPLGARAMYLFNEKGQDTLFRIHGSPEWASIGTAAS 231 Query: 113 VGCYAMTDAQIDEIFAFVRDA--FVGGQP 139 GC M + + ++++ VR Sbjct: 232 SGCIRMINQDVIDLYSRVRPGRSTKVVVI 260 >ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 Length = 133 Score = 86.8 bits (214), Expect = 3e-16 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 13/133 (9%) Query: 14 PVYIR-IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I + K ++ +++ L ++P G K EGD ++PEG Y ++ Sbjct: 2 PRRILAVDKNHQRFLIFE--RHSPLALRGTFPCTTGQAD-GDKVAEGDLRTPEGIYFIEG 58 Query: 73 NQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----AC-VSVGCYAMTDAQI 123 + L+ +A + +PN DR +G + IH + GC A+ I Sbjct: 59 KRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGDI 118 Query: 124 DEIFAFVRDAFVG 136 D + + Sbjct: 119 DALAGTLAPGTPV 131 >gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methylococcus capsulatus str. Bath] Length = 241 Score = 86.8 bits (214), Expect = 3e-16 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 46/161 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++LEL +A +++ Y + G+G KR G +P G++ V+ Sbjct: 82 DFLHISVPRQRLELIEA-----GKVVAHYRVSTAKNGVGEKR--GSECTPRGWHRVRAKI 134 Query: 74 -----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKY 103 P Y + D +Y Sbjct: 135 GAGLPAGAVLVGRRPTGEIYTPLLAARHPGRDWILSRILWLGGLQPGFNRYGEVDTAWRY 194 Query: 104 LMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVG 136 + IHG S GC +T A + ++F V + Sbjct: 195 IYIHGSPDDGVDGTPQSHGCIRLTSADVIDLFDRVPVGALV 235 >gi|68247205|gb|EAN29293.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 362 Score = 86.8 bits (214), Expect = 3e-16 Identities = 22/149 (14%), Positives = 38/149 (25%), Gaps = 34/149 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I E +L +A ++++P+ G +P + + Sbjct: 135 LVINLPEMRLYHRRADGR-----LETFPVGIGREGFD---------TPISRAKIIRKKSA 180 Query: 77 PDSRYYLAI-----------NIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCY 116 P +I G N Y +IHG VS GC Sbjct: 181 PSWYVPASIREENPKLPAVIPPGASNPLGSHAIYLSLPGYLIHGTNKPYGIGRRVSHGCI 240 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 M I ++ R + Sbjct: 241 RMYPEDIPRLYTSARVGATVAIVNEPAKA 269 >ErfK_YbiS_YhnG_Q8UH40_114-255_PF03734.4 Length = 142 Score = 86.4 bits (213), Expect = 4e-16 Identities = 21/145 (14%), Positives = 40/145 (27%), Gaps = 25/145 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P + + R L + + Y + G G + + P+ Sbjct: 1 ERPGTVVVDTRSRFLYVVEQGGSAM-----RYGVGIGRDGFAWSGEGVIQWRQKWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP----NAYDRAHGY-----TGKYLMIHGAC--------V 111 + P+ Y + N G P N Y +HG+ V Sbjct: 56 PDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC + + + +++ V Sbjct: 116 SSGCVRLMNQDVIDLYDRVPQKARV 140 >gi|23127349|ref|ZP_00109222.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 179 Score = 86.4 bits (213), Expect = 4e-16 Identities = 25/138 (18%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 E P +I I E++L W+ K +L+ SY I +P Sbjct: 55 ESDISQTSQPRWIEIDLSEQRLRAWEGK-----KLVYSYRISGGK---------RSTPTP 100 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDA 121 G + + R P GY H G VS GC + Sbjct: 101 IGRFRINSKYRTHRMRGRGYNIPDVPYTMYFYRGYAIHGAYWHNRFGTPVSHGCVNLPVK 160 Query: 122 QIDEIFAFVRDAFVGGQP 139 Q ++ + + Sbjct: 161 QARNVYNWASYGTLVVVR 178 >gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] Length = 170 Score = 86.4 bits (213), Expect = 4e-16 Identities = 25/158 (15%), Positives = 45/158 (28%), Gaps = 29/158 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ G P I + +L E ++ K PI Sbjct: 16 PLWPIGPNPTVGDPFLI-VNIATNRLAYVD-----EGKIQKIVPIATGKP---------S 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGAC---- 110 ++P G +++ P R N G+ IHG Sbjct: 61 DKTPVGLFTITVKAEQPYYRKKNIAGGDPKNPLGTRWLGFDAKDTEGRTYGIHGTNRPES 120 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 V+ GC + + +++E++A + VS Sbjct: 121 IGRYVTAGCIRLQNKEVEELYANIPLGTKILIVDYVVS 158 >gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesorhizobium loti MAFF303099] Length = 200 Score = 86.4 bits (213), Expect = 4e-16 Identities = 19/147 (12%), Positives = 41/147 (27%), Gaps = 19/147 (12%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSP 64 P + I + K R + + + + +P S G + ++P Sbjct: 52 DSPATIAGIEVDKGARLVRVLDPS----GKWLAVFPASIGSAEKPAPGGEAEVKRVVRNP 107 Query: 65 EGFY--SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVG 114 Y + + +A P + + IHG S G Sbjct: 108 TYHYDPRFAFKGVKAKRPFTIAAGPNNPVGSVWI-DLSIESYGIHGTPEPGKIGTTFSHG 166 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSV 141 C +T+ +++ + V+ Sbjct: 167 CIRLTNWDAEDLASMVQKGTKVSFKDE 193 >ErfK_YbiS_YhnG_Q89CV1_74-185_PF03734.4 Length = 112 Score = 86.4 bits (213), Expect = 4e-16 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 25/130 (19%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ I I ++++ L+ LI + G +P G +SV Sbjct: 3 PLQIIISIADQRVSLFDN-----GALIARSSVSTGMEG---------HPTPLGVFSVISK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFA 128 Q S Y A + + + +H G S GC + ++ Sbjct: 49 QRWHRSNIYSAAPMPYMQRITW------SGIALHAGVVPGHPASHGCIRLKSDFAVRLWH 102 Query: 129 FVRDAFVGGQ 138 + Sbjct: 103 LTKRGTRVII 112 >gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legionella pneumophila str. Lens] Length = 162 Score = 86.0 bits (212), Expect = 4e-16 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 48/163 (29%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----- 70 +I I +++++ ++ LI +Y I G+G K G +P G++ + Sbjct: 7 FIFISIKKQEMNCFEKD-----HLIANYAISSGKNGVGEKINSGC--TPRGWHKIHSILG 59 Query: 71 -------QPNQLNPDSRYYL-AINIGFPNAYDRAHGY-------------------TGKY 103 Y ++ FP D +Y Sbjct: 60 IDLPINSVMVAREWTGEIYSESLATQFP-ERDWILTRIIQLDGLEPGRNKGGDVDTLYRY 118 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG S GC + + I E+ A+ + Sbjct: 119 IYIHGTPDTTQLGIPGSHGCIRLNNDAIIELAAWATKNTLVYI 161 >gi|23346823|gb|AAN29007.1| lipoprotein, putative [Brucella suis 1330] Length = 241 Score = 86.0 bits (212), Expect = 5e-16 Identities = 23/137 (16%), Positives = 38/137 (27%), Gaps = 22/137 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ++ L Y + G G E Q P Sbjct: 102 QAPGTIVVSLKDHFLYYVLPGGEAL-----RYGVGIGKAGFEWQGRANVEYKKQWPRWTP 156 Query: 69 SVQPNQLNPDSRYYLAINIGFP-NAYDRAHGY-----TGKYLMIHGAC--------VSVG 114 + Q P+ Y P N Y IHG+ +S G Sbjct: 157 PPEMIQRKPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSMSSG 216 Query: 115 CYAMTDAQIDEIFAFVR 131 C + + I +++ V+ Sbjct: 217 CIRLMNQDIIDLYNRVQ 233 >gi|68234377|ref|ZP_00573460.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 393 Score = 86.0 bits (212), Expect = 5e-16 Identities = 26/146 (17%), Positives = 45/146 (30%), Gaps = 27/146 (18%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + +P I + + KL L+ ++I + D +P G Sbjct: 263 QVTASQTPYRIVVARGAHKLRLYSND-----KMIAEESVAIG---------TTDTPTPGG 308 Query: 67 FYSVQP--NQLNPDSRYYL-AINI-GFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 + + NP Y A + GF + D G + IHG VS G Sbjct: 309 RFFLMELLKPSNPGGPYGPYAFGLSGFSTSLDSFGGRD-PVIGIHGTNEPGSIGRDVSHG 367 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPS 140 C +++ I + V + Sbjct: 368 CIRLSNDAITRLAQTVPLGTPVEIIA 393 >gi|17936017|ref|NP_532807.1| hypothetical protein Atu2133 [Agrobacterium tumefaciens str. C58] Length = 472 Score = 86.0 bits (212), Expect = 5e-16 Identities = 31/157 (19%), Positives = 45/157 (28%), Gaps = 35/157 (22%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + G I K +++ + G + LI +YP S D SP Sbjct: 329 PGEAKKGQVARIVAHKGIKQVFAY----GQDGNLIAAYPATIGS---------TDTPSPS 375 Query: 66 GFYSVQPNQLNPDSRYYLAI-------------NIGFPNAYDRAH-GYTGKYLMIHGAC- 110 G ++V+ LNP Y I G + IHG Sbjct: 376 GTHTVERIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKPTYGIHGTPE 435 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ E+ VR V Sbjct: 436 PSKIGKTNSHGCIRLTNWDATELAKMVRPGVVVEFAE 472 >ErfK_YbiS_YhnG_Q98KE1_92-230_PF03734.4 Length = 139 Score = 86.0 bits (212), Expect = 5e-16 Identities = 20/136 (14%), Positives = 37/136 (27%), Gaps = 22/136 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---KRREGDFQSPEGFY 68 P I + E L L + Y + G G + + P Sbjct: 1 EKPGTIVVDVSEHFLYLVRDGGKAI-----RYGVSLGKAGFGWTGSAVVQARKKWPVWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVG 114 + Q P+ ++ + G + Y +HG S G Sbjct: 56 PPEMIQRRPELAKFKDGMPPGPQSPLGARALYLFRDGKDTMYRLHGTPEWDSIGKNASSG 115 Query: 115 CYAMTDAQIDEIFAFV 130 C + I ++++ V Sbjct: 116 CVRFMNQDIIDLYSRV 131 >ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 Length = 135 Score = 85.6 bits (211), Expect = 6e-16 Identities = 31/148 (20%), Positives = 44/148 (29%), Gaps = 34/148 (22%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 I K ++L L+ Q+I S+P S D SP G Y V Sbjct: 1 EDIHLIIAHKGAKQLYLF----NSRNQMIASFPATIGS---------TDTPSPTGTYKVV 47 Query: 72 PNQLNPDSRY------------YLAINIGFPNAYDRAH-GYTGKYLMIHGAC-------- 110 NP Y L++ G G + K IHG Sbjct: 48 GVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNPSLISKT 107 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ +++ VR Sbjct: 108 ASHGCIRLTNWDANDLGNKVRSGVTVKF 135 >gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Bradyrhizobium japonicum USDA 110] Length = 401 Score = 85.6 bits (211), Expect = 7e-16 Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 19/145 (13%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGD 60 +E+ I + L Y + G G ++ Sbjct: 213 QEVSLATKEPAGTIIVDTPNTYLYYVLGNGRAV-----RYGVRVGRDGFTWTGVQKITRK 267 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------V 111 + P+ + + P ++A G N Y G + IHG V Sbjct: 268 AEWPDWHPPTEMIERQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNQPSTIGKFV 325 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC M + + ++F V+ Sbjct: 326 SSGCIGMLNEDVSDLFDRVKVGTRV 350 >gi|68174074|ref|ZP_00547345.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 231 Score = 85.6 bits (211), Expect = 7e-16 Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 31/148 (20%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + +P + + + +L+++ I P+ + D +P G Sbjct: 101 QVTASETPYRLVVSRSRHRLQVFSNGTQ-----IAEEPVGIGTA---------DTPTPGG 146 Query: 67 FYSVQP--NQLNPDSRYYL-AINIGFPNAYDRAHGYTGKY---LMIHGAC--------VS 112 + + +P+ Y A + N + + G + + +HG VS Sbjct: 147 RFYLMELLKPRDPNGPYGPYAFGL---NGFSTSLSSFGGHKPVIGVHGTNEPKLIGKDVS 203 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC +++ I + V + Sbjct: 204 HGCIRLSNDAITRLAQTVPLGTPIDIVA 231 >ErfK_YbiS_YhnG_Q8UJ84_117-259_PF03734.4 Length = 143 Score = 85.6 bits (211), Expect = 7e-16 Identities = 23/146 (15%), Positives = 38/146 (26%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + +R L + Y I G G + P Sbjct: 1 ERPGTIIVNTRDRYLYYIMSGNRAV-----RYGIGVGKAGFAWAGEAYVAWKQEWPMWHP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC--------VS 112 + P+ Y+ + G N Y IHG+ S Sbjct: 56 PKEMADRKPEVAKYVEAGMGPGLSNPLGARAMYLFNEKGQDTLFRIHGSPEWASIGTAAS 115 Query: 113 VGCYAMTDAQIDEIFAFVRDA--FVG 136 GC M + + ++++ VR Sbjct: 116 SGCIRMINQDVIDLYSRVRPGRSTKV 141 >gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [Thiomicrospira denitrificans ATCC 33889] Length = 321 Score = 85.2 bits (210), Expect = 8e-16 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 13/124 (10%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-----Q 74 K L L+ ++ K Y G K +EGD ++P G Y + + Sbjct: 68 DKSLSSLNLYSLDENQNFKFKKKYSAFTGKM-KGDKIKEGDLRTPTGIYQITQKLSKETK 126 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------SVGCYAMTDAQIDEIFA 128 L+P A +PN YD G G + IHG + GC A+ ++ I+ + Sbjct: 127 LDPFY-GPFAFVTSYPNVYDTYKGKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIECLNK 185 Query: 129 FVRD 132 + Sbjct: 186 NIDI 189 >ErfK_YbiS_YhnG_Q989D5_60-195_PF03734.4 Length = 136 Score = 85.2 bits (210), Expect = 9e-16 Identities = 24/142 (16%), Positives = 39/142 (27%), Gaps = 25/142 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 P I I K E+ L L + Y I G G + + P+ Sbjct: 1 EQPGTIIIRKSEKALYLVTRQGQAL-----RYQISVGRDGFGWTGVVKVGAKTEWPQWRP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP-NAYDRAHGY-----TGKYLMIHGACV--------SVG 114 + P+ + P N Y IHG + G Sbjct: 56 PREMRARQPELP---ELVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGVGFDGTSG 112 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C+ +T+ + ++F V Sbjct: 113 CFRLTNTDVIDLFKRVPVGTKV 134 >gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 435 Score = 85.2 bits (210), Expect = 9e-16 Identities = 28/166 (16%), Positives = 45/166 (27%), Gaps = 36/166 (21%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L LP +P I I +L +K G + +YP+ + + + Sbjct: 109 PLNFILPDAPRKGIVINLATMRLFQFKENGGAL--AVSTYPVGIGTK---------ERPT 157 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGY-TGKYLMIH 107 P+G V P +I G N Y + +IH Sbjct: 158 PQGPTRVARKASRPTWYVPASIAEDHRKKGDILPARVPPGPENPLGDYALYLSRSGYLIH 217 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 G S GC + I+ +F + I Sbjct: 218 GTNKPASIGLKASNGCMRLYPEHIEVLFRDTAVNTPVLIVNQPYLI 263 >gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromobacterium violaceum ATCC 12472] Length = 208 Score = 85.2 bits (210), Expect = 9e-16 Identities = 25/180 (13%), Positives = 56/180 (31%), Gaps = 51/180 (28%) Query: 5 ELKQQLPGSPV----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 L+ P + ++ + + + L L ++ K + + G+G G Sbjct: 34 PLQATHPNARHYGAPWVWVGVKSQTLRLLDD----WGRIQKEFTVSTAKNGVG--ETSGS 87 Query: 61 FQSPEGFY-------------SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-------- 99 +Q+P G++ ++ + +Y +++ +PN D Sbjct: 88 YQTPRGWHAVCEKLGAGAEANTIIFRRQVTPWKYTPELHVQYPNK-DWILTRILWLCGQE 146 Query: 100 -----------TGKYLMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + + IHG S+GC M + + E+F V + Sbjct: 147 PGLNQGGNVDSYDRAIYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNGTDVWIDE 206 >gi|23006269|ref|ZP_00048665.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 248 Score = 85.2 bits (210), Expect = 1e-15 Identities = 24/166 (14%), Positives = 39/166 (23%), Gaps = 48/166 (28%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 +E+ + P I + + L + Y + G Sbjct: 94 QEVDFRTTEPPGTIVVDPKAHFLYFVLPNGRA-----RRYGVGVGKQGFSWS-------- 140 Query: 64 PEGFYSVQPNQLNPDSRYYLAI----------------NIGFP----NAYDRAHGYTGKY 103 G ++ Q PD + +G P N Y + Sbjct: 141 --GTATINSKQAWPDWYPPKEMIARRPDLASQVDKLQSGLGVPGGTRNPLGARAMYLWQN 198 Query: 104 -----LMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG VS GC M + ++F V Sbjct: 199 NKDTLFRIHGTLEPQSIGKSVSSGCIRMINQDAIDLFNRVEVGARV 244 >gi|15141233|emb|CAC49746.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 243 Score = 84.9 bits (209), Expect = 1e-15 Identities = 22/153 (14%), Positives = 38/153 (24%), Gaps = 29/153 (18%) Query: 3 SKELKQQLP----GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 K +Q++P + + R L L + Y + G G Sbjct: 78 PKYFRQRVPDPTGEPAGTVVVDTPGRFLYLIEPGGTAM-----RYGVGIGREGFAWQGEG 132 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMI 106 P P+ Y + G N Y + Sbjct: 133 IIHWRQPWPRWKPPADMIARRPELEKYSVANGGMAPGIDNPLGARALYIFQNGQDTLYRL 192 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVR 131 HG VS GC + + + +++ V Sbjct: 193 HGTPEWKSIGKAVSSGCVRLVNQDVIDLYKRVP 225 >gi|15074222|emb|CAC45869.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 408 Score = 84.9 bits (209), Expect = 1e-15 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 28/166 (16%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 S +P+ + + ++++ L ++ ++ + + G Sbjct: 16 SPSALAAGAKTPLQVVVSRDQQSLVVYDGD-----TVVATSKVSTGKAG---------HA 61 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCY 116 +P G +S+ + +S Y P + + T + +HG S GC Sbjct: 62 TPTGIFSILEKRRRHESNIYS----NAPMPFMQRL--TWSGIALHGSNHVPDYPASHGCV 115 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP 162 + +F I P + + + S Sbjct: 116 RLPGKFAASLFKMTGYGMHVVISDR--QIAPVEVASEMLFQPSESR 159 >gi|17133905|dbj|BAB76467.1| all4768 [Nostoc sp. PCC 7120] Length = 171 Score = 84.9 bits (209), Expect = 1e-15 Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 17/130 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I ++L W+ K +L+ S+ I +P G + + Sbjct: 55 QPRRIEIDLSAQRLFAWEGK-----KLVYSFRISTGK---------RSTPTPIGQFKINS 100 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P A GY H G VS GC + +++ + Sbjct: 101 KYRTNRMRGPGYDIPNVPYAMYFHRGYAIHGAYWHNRFGTPVSHGCVNLPVKLARKLYNW 160 Query: 130 VRDAFVGGQP 139 + Sbjct: 161 TTPGTLVIVR 170 >gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinorhizobium meliloti 1021] Length = 327 Score = 84.9 bits (209), Expect = 1e-15 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 17/149 (11%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREGD 60 + G I + K ++ + + + +YP S G G + +G Sbjct: 183 KPGAAKEGEVKRIEVRKRAGQVLAF----AEDGSPLAAYPASIGSEGSPSPTGTHKVKGV 238 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV-------- 111 + P Y N D+ L + G N T IHG Sbjct: 239 ARMPPYEYDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDLTEPTYGIHGTPEPSLIDKAQ 298 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +E+ A V+ V Sbjct: 299 SHGCVRLTNWDAEELAAMVKPGVVAEFID 327 >gi|71364962|ref|ZP_00655525.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 432 Score = 84.5 bits (208), Expect = 2e-15 Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 32/142 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + K ++ L + +L+ +YP S SP+G + + Sbjct: 305 RVVANKADKTLYAYNDD-----KLVATYPTTVGSDST---------PSPQGTFKIVNKVK 350 Query: 76 NPDSRYY------LAINIGFPNAYDR----AHGYTGKYLMIHGAC--------VSVGCYA 117 P + +++ P G + +HG+ S GC Sbjct: 351 MPWYKATVGEGADKKVHMLPPGPNSPVGVVWMGLSKPSYGLHGSPKPEGISRQASAGCVR 410 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + E++A + + Sbjct: 411 LTNWDVLEVYANIENGATVELK 432 >gi|68189539|gb|EAN04205.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 490 Score = 84.5 bits (208), Expect = 2e-15 Identities = 33/161 (20%), Positives = 46/161 (28%), Gaps = 40/161 (24%) Query: 7 KQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 K PG P I K +++ L+ +LI YP S D Sbjct: 343 KVANPGQPAKSAVARIVADKSRKQVRLFDEG----GRLIGVYPATIGSS---------DT 389 Query: 62 QSPEGFYSVQPNQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIH 107 SP G + V+ LNP+ Y L I G + IH Sbjct: 390 PSPTGIHQVERVALNPNYTYDPRKNFKQGNNDKVLTIPPGPNGPVGSVWIALSKPTYGIH 449 Query: 108 GACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 G S GC +T+ E+ V+ Sbjct: 450 GTPEPSKIGKTYSHGCVRLTNWDAQELAKRVKPGVTVEFTE 490 >gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 171 Score = 84.1 bits (207), Expect = 2e-15 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 23/137 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P I + E +L L +A +P+ S G KR EGD ++P G Y++ Sbjct: 35 PPVDALILVDTAEHRLALCEAGAAAA-----VFPVALGSAGT-EKRAEGDRRTPLGAYAL 88 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCY 116 P + + I IG+P A R G TG + IHG A + GC Sbjct: 89 GT--PRPSAGFGTFIPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCV 146 Query: 117 AM-TDAQIDEIFAFVRD 132 A+ +D ++ + AFV Sbjct: 147 ALGSDPEVAAVAAFVER 163 >gi|67938515|ref|ZP_00531039.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 270 Score = 84.1 bits (207), Expect = 2e-15 Identities = 23/147 (15%), Positives = 41/147 (27%), Gaps = 25/147 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 PV E P + + ER++ ++ + +L+ P+ Sbjct: 139 PVDIEKASAYVPIPQVLDDSRGEREIRVYLDQQYFGAYEDGKLLFWGPVSSGKK------ 192 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 + G + V Q Y + I + NA IH G Sbjct: 193 ---SRPTWPGKFFVNYKQR-----YKRS--IKYHNAPMPYSINYSGGYFIHEQSLPGYPA 242 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + ++F +V Sbjct: 243 SHGCIRLLMTDAKKLFNWVTIGDPVTV 269 >gi|58580802|ref|YP_199818.1| hypothetical protein XOO1179 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 365 Score = 84.1 bits (207), Expect = 2e-15 Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 17/131 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ + ++ +P+ S + + G ++P Y Sbjct: 229 KPAKLVVDKSDSTLRLFD----ADGKVYAQFPVSSGSKHDPLPIRRWKILGVARNPVFKY 284 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + G N R + + +HG S GC +T Sbjct: 285 NPTLFWDAKKGEQKATLPPGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 344 Query: 120 DAQIDEIFAFV 130 + + + + V Sbjct: 345 NWDVVNLASVV 355 >gi|68190217|gb|EAN04877.1| Twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1] Length = 238 Score = 84.1 bits (207), Expect = 2e-15 Identities = 22/159 (13%), Positives = 40/159 (25%), Gaps = 25/159 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + P + + L L + Y + G G + Sbjct: 79 YRQLVDDPTGERPGTVVVDTRSYFLYLVRPGGKAM-----RYGVGLGRQGFTWSGDGVIQ 133 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYT-----GKYLMIHGA 109 + P+ + P+ + A N G P N Y +HG Sbjct: 134 WKQRWPKWTPPAEMIARQPELEKWSADNGGQPPGLNNPLGARALYIFQNGEDTLYRLHGT 193 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC + + I +++ V Sbjct: 194 PEYWTIGKAVSSGCVRLMNQDIIDLYDRVATPTPIIVRG 232 >gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein family [Psychrobacter arcticum 273-4] Length = 473 Score = 84.1 bits (207), Expect = 2e-15 Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 32/142 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + K ++ L + +L+ +YP S SP+G + + Sbjct: 346 RVVANKADKTLYAYNDD-----KLVATYPTTVGSDST---------PSPQGTFKIVNKVK 391 Query: 76 NPDSRYYLAINIG------FPNAYDR----AHGYTGKYLMIHGAC--------VSVGCYA 117 P + + P G + +HG+ S GC Sbjct: 392 MPWYKATVGEGTDKKVHMLPPGPNSPVGVVWMGLSKPSYGLHGSPKPEGISRQASAGCVR 451 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + E++A + + Sbjct: 452 LTNWDVLEVYANIENGATVELK 473 >ErfK_YbiS_YhnG_Q57FW6_102-240_PF03734.4 Length = 139 Score = 83.7 bits (206), Expect = 2e-15 Identities = 23/137 (16%), Positives = 38/137 (27%), Gaps = 22/137 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ++ L Y + G G E Q P Sbjct: 1 QAPGTIVVSLKDHFLYYVLPGGEAL-----RYGVGIGKAGFEWQGRANVEYKKQWPRWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP-NAYDRAHGY-----TGKYLMIHGAC--------VSVG 114 + Q P+ Y P N Y IHG+ +S G Sbjct: 56 PPEMIQRKPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSMSSG 115 Query: 115 CYAMTDAQIDEIFAFVR 131 C + + I +++ V+ Sbjct: 116 CIRLMNQDIIDLYNRVQ 132 >gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes] Length = 322 Score = 83.7 bits (206), Expect = 2e-15 Identities = 27/120 (22%), Positives = 42/120 (35%), Gaps = 10/120 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 K +L L++ +L + G KR EGD ++P G Y + Sbjct: 66 YLFIADKALSELSLYQLGGKKPERLAHTK--ALMGSKKGDKRIEGDLKTPIGVYDLTAKL 123 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-------VSVGCYAMTDAQIDEI 126 LA +PN YD +G + IHG + GC A+ + + I Sbjct: 124 TRLDQLYGPLAFVTSYPNLYDSLQKKSGSGIWIHGLPLNGDREINTKGCIAIDNQLLKTI 183 >gi|15156344|gb|AAK87086.1| AGR_C_2380p [Agrobacterium tumefaciens str. C58] Length = 425 Score = 83.7 bits (206), Expect = 2e-15 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 25/135 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ++ L L++ ++I + + G ++P G +S+ + Sbjct: 44 ILVSKSDQSLSLYEN-----GEIIATSKVSTGKAG---------HETPSGIFSILEKRKY 89 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFAFVR 131 +S Y A P + + T + +H S GC + +F R Sbjct: 90 HESNIYSAA----PMPFMQRL--TWSGIALHEGKVPNYPASHGCVRLPSKFAKSLFGDTR 143 Query: 132 DAFVGGQPSVQVSIY 146 VS+ Sbjct: 144 AGVHVIITDRPVSLR 158 >gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 324 Score = 83.7 bits (206), Expect = 2e-15 Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 19/138 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + I K + L L+ + ++ +P+ S +G + G + P+ Y Sbjct: 188 KPAKLVIDKSDSTLRLFD----AQGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKFHY 243 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAM 118 + + + + L P + + +HG S GC + Sbjct: 244 NPKLFWDAKPGEGKATLPPGPNNPVGRVWI-DLSKPHYGLHGTPEPGHVGKTESHGCVRL 302 Query: 119 TDAQIDEIFAFVRDAFVG 136 T+ + + + V + Sbjct: 303 TNWDVVNLASVVDASVPV 320 >gi|16119419|ref|NP_396125.1| hypothetical protein AGR_pAT_272 [Agrobacterium tumefaciens str. C58] Length = 248 Score = 83.7 bits (206), Expect = 2e-15 Identities = 21/159 (13%), Positives = 38/159 (23%), Gaps = 25/159 (15%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + +P + + R L L + Y + G G Sbjct: 92 QRVADPTGEAPGTVVVDTPRRFLYLVENGGTAL-----RYGVGIGRDGFSWEGNGYIHWR 146 Query: 61 FQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGAC- 110 P + P+ Y ++ G N Y +HG Sbjct: 147 QHWPRWKPPSEMIARQPELEKYSVANGGMDPGLHNPLGARALYIFQNGEDTLYRLHGNPE 206 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 VS GC + + I +++ V Sbjct: 207 WQSIGKAVSSGCVRLMNQDIVDLYDRVPFHAPIVVHQTP 245 >ErfK_YbiS_YhnG_Q9KCV4_26-152_PF03734.4 Length = 127 Score = 83.7 bits (206), Expect = 2e-15 Identities = 22/141 (15%), Positives = 41/141 (29%), Gaps = 29/141 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P I + +L E ++ K PI ++P G +++ Sbjct: 2 GDPFLI-VNIATNRLAYVD-----EGKIQKIVPIATGKP---------SDKTPVGLFTIT 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGAC--------VSVGCYA 117 P R N G+ IHG V+ GC Sbjct: 47 VKAEQPYYRKKNIAGGDPKNPLGTRWLGFDAKDTEGRTYGIHGTNRPESIGRYVTAGCIR 106 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 + + +++E++A + Sbjct: 107 LQNKEVEELYANIPLGTKILI 127 >gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5] Length = 397 Score = 83.7 bits (206), Expect = 2e-15 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 18/126 (14%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + + + P + + K + L ++K K +L YP+ +G K REGD + Sbjct: 126 APPVLVENPENHYVFLVEKMSQYLFVFKGK-----KLEGMYPVTTGMN-IGDKEREGDGK 179 Query: 63 SPEGFYSVQPNQLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------- 110 +PEG Y +A+ + +PN YD+ G TG + +HG+ Sbjct: 180 TPEGVYYFTRFIPPEQLSEIYGGIAVALNYPNPYDKLLGKTGSGIWLHGSNEKDRDKLPF 239 Query: 111 VSVGCY 116 + GC Sbjct: 240 STRGCV 245 >gi|71364613|ref|ZP_00655198.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 391 Score = 83.7 bits (206), Expect = 3e-15 Identities = 24/142 (16%), Positives = 38/142 (26%), Gaps = 28/142 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + K L + K L+ SYP S SP G ++V Sbjct: 263 PVSRVVADKATETLYAYDDK----GILVASYPTTVGSTAT---------PSPTGTHTVAV 309 Query: 73 NQLNPDSRYYLA------INIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYA 117 P+ Y + G N G + IHG+ S GC Sbjct: 310 KVHEPNYTYTAENGSKSILPPGPNNPVGSVWIGLSKPSYGIHGSPDPARISRQASAGCIR 369 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + ++ Sbjct: 370 LTNWDALALLGVIQSGATVEFK 391 >gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protein [Helicobacter pylori 26695] Length = 330 Score = 83.7 bits (206), Expect = 3e-15 Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 12/147 (8%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 K + LE ++ + + I S S G K EGD +P G Y Sbjct: 64 YQNKQFLFVANKSKPSLEFYEIENN-MLKKINSSKALVGSK-KGDKTLEGDLATPIGVYR 121 Query: 70 VQPNQLNPDSRYY-LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTD 120 + D Y LA +PN YD TG + +HG + GC A+ + Sbjct: 122 ITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIEN 181 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + + V + + +P Sbjct: 182 PLLSS-YDKVLKGEKAFLITYEDKFFP 207 >ErfK_YbiS_YhnG_Q98PA3_31-163_PF03734.4 Length = 133 Score = 83.3 bits (205), Expect = 3e-15 Identities = 18/136 (13%), Positives = 40/136 (29%), Gaps = 21/136 (15%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY--SV 70 I + K R + + + + +P S G + ++P Y Sbjct: 5 IEVDKGARLVRVLDPS----GKWLAVFPASIGSAEKPAPSGEAEVKRVVRNPTYHYDPRF 60 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDAQ 122 + + +A P + + + IHG S GC +T+ Sbjct: 61 AFKGVKAKRPFTIAAGPNNPVVWIDL---SIESYGIHGTPEPGKIGTTFSHGCIRLTNWD 117 Query: 123 IDEIFAFVRDAFVGGQ 138 +++ + V+ Sbjct: 118 AEDLASMVQKGTKVSF 133 >gi|7380643|emb|CAB85233.1| hypothetical protein [Neisseria meningitidis Z2491] Length = 358 Score = 83.3 bits (205), Expect = 3e-15 Identities = 24/147 (16%), Positives = 37/147 (25%), Gaps = 36/147 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +++L L+ + +L K YP+ Q+ G + + N Sbjct: 49 VFINIPQQRLFLY-----TDGKLTKVYPVAVGRAMT---------QTNLGEHKIGAKAYN 94 Query: 77 PDSRYYLAI-----------NIGFPNAYDR---AHGYTGKYLMIHGACV--------SVG 114 P +I G N G L IHG S G Sbjct: 95 PVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHG 154 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSV 141 C M E + Sbjct: 155 CVRMKSPDALEFAKTIASGSPASVIYQ 181 >gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 153 Score = 83.3 bits (205), Expect = 3e-15 Identities = 19/137 (13%), Positives = 39/137 (28%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + + IKS+ + +P+G + + N Sbjct: 31 LIVNTQLNKMDYYQ-----DGKFIKSFAVATGKAAT---------PTPKGTFQIVNKIKN 76 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGACV--------SVGCYAMTDAQ 122 N G G IHG ++GC M + Sbjct: 77 RPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKATTLGCIRMYNND 136 Query: 123 IDEIFAFVRDAFVGGQP 139 I +F V+ Sbjct: 137 IHWLFERVQQQATVTVK 153 >ErfK_YbiS_YhnG_Q8UAP2_82-223_PF03734.4 Length = 142 Score = 82.9 bits (204), Expect = 4e-15 Identities = 23/145 (15%), Positives = 37/145 (25%), Gaps = 25/145 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + L L Y + G G + Q P Sbjct: 1 ERPGVIVVDTANHFLYLTYEDGQAM-----RYGVGLGRAGFEWAGRGVIQYKRQWPRWTP 55 Query: 69 SVQPNQLNPDSRYYLA----INIGFPNAYDRAHGY-----TGKYLMIHGAC--------V 111 + P+ Y + G N Y +HG+ V Sbjct: 56 PDEMIARQPELEPYSGRNGGMEPGLKNPLGARALYIFKDGKDTIYRLHGSPEWWTIGKSV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC + + I ++++ V D Sbjct: 116 SSGCVRLLNQDIVDLYSRVPDGTPI 140 >gi|13474192|ref|NP_105760.1| hypothetical protein mll5027 [Mesorhizobium loti MAFF303099] Length = 255 Score = 82.5 bits (203), Expect = 5e-15 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 22/142 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + +ER L L + Y + G G + + P Sbjct: 116 EAPGTIVVHLKERMLYLVQPGGDAI-----RYGVGIGKDGFRWSGRANIQYGREWPTWTP 170 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVG 114 + Q P+ ++ G N Y IHG+ +S G Sbjct: 171 PPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSG 230 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C + + I ++++ V Sbjct: 231 CVRLINQDIIDLYSRVSKKNPV 252 >ErfK_YbiS_YhnG_Q67P27_207-347_PF03734.4 Length = 141 Score = 82.5 bits (203), Expect = 6e-15 Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 28/148 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ----SPEGF 67 P I + K L ++ + +L+++ + GP ++ +P G Sbjct: 1 PEPTVIVVDKGLNVLWYYE-----DGELVQTARVSTGRHVAGPAPSPDNWTENLLTPTGR 55 Query: 68 YSVQPNQLNPDSRYYLAI--NIGFPNAYDRAH-------GYTGKYLMIHGACV------- 111 ++V + P YY + N G G IHG Sbjct: 56 FTVTL--MVPGMPYYKEGIDALDPANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALGRW 113 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S G M++ ++++++ V Sbjct: 114 NSEGSIVMSNGEVEQLYERVELGTPVII 141 >gi|69933021|ref|ZP_00628223.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 248 Score = 82.5 bits (203), Expect = 6e-15 Identities = 21/156 (13%), Positives = 37/156 (23%), Gaps = 23/156 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + P + I + R L Y + G G Sbjct: 64 QRVPYNGPEAAGTIVVDPYARFLYHVLGNGEAM-----RYGVAVGQAGKNFQGTASVGRK 118 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINI--GFPNAYDRAHGY-----TGKYLMIHGA---- 109 P + + P+ L + G N Y IHG Sbjct: 119 HAWPSWTPTANMVRTQPELYGPLKGGLRGGVDNPLGSRALYLYKGGRDTMYRIHGTMDPS 178 Query: 110 ----CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC + + I ++F + + + Sbjct: 179 SIGKATSAGCIRLFNQDIMDLFHDIPNGTTVKVRTQ 214 >ErfK_YbiS_YhnG_Q8X604_93-232_PF03734.4 Length = 140 Score = 82.2 bits (202), Expect = 6e-15 Identities = 28/148 (18%), Positives = 38/148 (25%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E +L + + + YPI GL ++P V N Sbjct: 6 IIVNLAELRLYYYPPGEN----IXQVYPIGIGLQGL---------ETPVMETRVGQKIPN 52 Query: 77 PDSRYYLAI---------------NIGFPNAYDRAHGY---TGKYLMIHGA--------C 110 P I G N R +IHG Sbjct: 53 PTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I +F+ VR Sbjct: 113 VSSGCIRMNAPDIKALFSSVRTGTPVKV 140 >gi|17937039|ref|NP_533828.1| hypothetical protein Atu3331 [Agrobacterium tumefaciens str. C58] Length = 261 Score = 82.2 bits (202), Expect = 6e-15 Identities = 26/157 (16%), Positives = 45/157 (28%), Gaps = 29/157 (18%) Query: 4 KELKQQLPGS----PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---- 55 + L+Q +P P I + L L Y + G Sbjct: 70 QFLRQMVPNPTGERPGVIVVDTANHFLYLTYEDGQAM-----RYGVGLGRAGFEWAGRGV 124 Query: 56 ---RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIH 107 +R+ +P + +L P S + G N Y +H Sbjct: 125 IQYKRQWPRWTPPDEMIARQPELEPYSGRNGGMEPGLKNPLGARALYIFKDGKDTIYRLH 184 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 G+ VS GC + + I ++++ V D Sbjct: 185 GSPEWWTIGKSVSSGCVRLLNQDIVDLYSRVPDGTPI 221 >ErfK_YbiS_YhnG_Q98CS5_116-254_PF03734.4 Length = 139 Score = 82.2 bits (202), Expect = 7e-15 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 22/142 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + +ER L L + Y + G G + + P Sbjct: 1 EAPGTIVVHLKERMLYLVQPGGDAI-----RYGVGIGKDGFRWSGRANIQYGREWPTWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVG 114 + Q P+ ++ G N Y IHG+ +S G Sbjct: 56 PPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVG 136 C + + I ++++ V Sbjct: 116 CVRLINQDIIDLYSRVSKKNPV 137 >ErfK_YbiS_YhnG_Q98G98_358-493_PF03734.4 Length = 136 Score = 82.2 bits (202), Expect = 7e-15 Identities = 27/148 (18%), Positives = 42/148 (28%), Gaps = 35/148 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K ++++ + A +L+ +YP S D SP G ++V Sbjct: 2 PVARIVADKTKKEVYAYDAS----GKLVAAYPATIGSA---------DTPSPTGIHAVSR 48 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 L+P+ Y L I G IHG Sbjct: 49 IALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKT 108 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ V Sbjct: 109 ESHGCVRLTNWDARELAKLVSPGVTVEF 136 >gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 175 Score = 82.2 bits (202), Expect = 7e-15 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 23/136 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P S + + + R+L L + + G+G KRR GD ++P G Y + Sbjct: 39 PRSRDAVVVVTDRRELWLCSGGAPA-----AQFTVALGRSGVG-KRRRGDGRTPLGTYPL 92 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCY 116 + +P +Y I I +P A G+TG + IHG + GC Sbjct: 93 GDPRPSP--QYGTFIPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCI 150 Query: 117 AM-TDAQIDEIFAFVR 131 A TD +D I AFVR Sbjct: 151 ATGTDGDVDAIAAFVR 166 >gi|68003733|ref|ZP_00536279.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 482 Score = 81.8 bits (201), Expect = 9e-15 Identities = 26/170 (15%), Positives = 46/170 (27%), Gaps = 36/170 (21%) Query: 1 PVSKELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 PV L LP +P I + +L ++ K G + +YP+ + Sbjct: 153 PVILPLSFVLPDTPRRGIVVNVATMRL--FQYKGDGASLAVSTYPVGVGTK--------- 201 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGF---------------PNAYDRAHGY-TGKY 103 + +P G V P +I N Y + Sbjct: 202 ERPTPTGPTRVYRKAARPTWHVPASIAEDHRKKGDPLPPEVPPGPENPLGEYALYLSKPG 261 Query: 104 LMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 +IHG + GC + I+ ++ + I Sbjct: 262 YLIHGTNKPASIGLKATNGCMRLYPENIEVLYNDTPVNTPVAIVNQPYLI 311 >ErfK_YbiS_YhnG_Q8UKC7_90-231_PF03734.4 Length = 142 Score = 81.8 bits (201), Expect = 1e-14 Identities = 21/140 (15%), Positives = 36/140 (25%), Gaps = 25/140 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P + + R L L + Y + G G P Sbjct: 1 EAPGTVVVDTPRRFLYLVENGGTAL-----RYGVGIGRDGFSWEGNGYIHWRQHWPRWKP 55 Query: 69 SVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 + P+ Y ++ G N Y +HG V Sbjct: 56 PSEMIARQPELEKYSVANGGMDPGLHNPLGARALYIFQNGEDTLYRLHGNPEWQSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVR 131 S GC + + I +++ V Sbjct: 116 SSGCVRLMNQDIVDLYDRVP 135 >gi|23347356|gb|AAN29495.1| conserved hypothetical protein [Brucella suis 1330] Length = 238 Score = 81.8 bits (201), Expect = 1e-14 Identities = 24/143 (16%), Positives = 34/143 (23%), Gaps = 25/143 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYSV 70 P I I R L Y + G G + Q P Sbjct: 98 PGTIVIDTANRFCYLVLDNGQAL-----RYGVGIGREGFAWSGRAVIQYKRQWPRWTPPD 152 Query: 71 QPNQLNPDSRYYLA----INIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSV 113 + P+ Y A + G N Y +HG VS Sbjct: 153 EMVARQPELVQYSAKNGGMAPGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGKAVSS 212 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC + I +++ V Sbjct: 213 GCVRFLNQDIIDLYDRVPAKTPI 235 >ErfK_YbiS_YhnG_Q92TZ7_91-232_PF03734.4 Length = 142 Score = 81.4 bits (200), Expect = 1e-14 Identities = 19/140 (13%), Positives = 32/140 (22%), Gaps = 25/140 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 + + R L L + Y + G G P Sbjct: 1 EPAGTVVVDTPGRFLYLIEPGGTAM-----RYGVGIGREGFAWQGEGIIHWRQPWPRWKP 55 Query: 69 SVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 P+ Y + G N Y +HG V Sbjct: 56 PADMIARRPELEKYSVANGGMAPGIDNPLGARALYIFQNGQDTLYRLHGTPEWKSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVR 131 S GC + + + +++ V Sbjct: 116 SSGCVRLVNQDVIDLYKRVP 135 >gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 215 Score = 81.4 bits (200), Expect = 1e-14 Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 19/129 (14%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ + ++ +P+ S +G + G + P Y Sbjct: 79 KPAKLVVDKSDSTLRLFD----ADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVFKY 134 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAM 118 + + + + L P + + +HG S GC + Sbjct: 135 NPKLFWDAKKGEQKATLPAGPNNPVGRVWI-DLSKPHYGLHGTPEPGHVGKTESHGCVRL 193 Query: 119 TDAQIDEIF 127 T+ + + Sbjct: 194 TNWDVVALA 202 >ErfK_YbiS_YhnG_Q8YN05_54-169_PF03734.4 Length = 116 Score = 81.4 bits (200), Expect = 1e-14 Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 17/127 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I ++L W+ K +L+ S+ I +P G + + Sbjct: 2 QPRRIEIDLSAQRLFAWEGK-----KLVYSFRISTGKRST---------PTPIGQFKINS 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P A GY H G VS GC + +++ + Sbjct: 48 KYRTNRMRGPGYDIPNVPYAMYFHRGYAIHGAYWHNRFGTPVSHGCVNLPVKLARKLYNW 107 Query: 130 VRDAFVG 136 + Sbjct: 108 TTPGTLV 114 >ErfK_YbiS_YhnG_Q8UDJ2_335-470_PF03734.4 Length = 136 Score = 81.0 bits (199), Expect = 1e-14 Identities = 31/149 (20%), Positives = 44/149 (29%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + G + LI +YP S D SP G ++V+ Sbjct: 1 GQVARIVAHKGIKQVFAY----GQDGNLIAAYPATIGS---------TDTPSPSGTHTVE 47 Query: 72 PNQLNPDSRYYLAI-------------NIGFPNAYDRAH-GYTGKYLMIHGAC------- 110 LNP Y I G + IHG Sbjct: 48 RIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 107 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ VR V Sbjct: 108 TNSHGCIRLTNWDATELAKMVRPGVVVEF 136 >ErfK_YbiS_YhnG_Q57EH0_96-237_PF03734.4 Length = 142 Score = 81.0 bits (199), Expect = 2e-14 Identities = 24/143 (16%), Positives = 34/143 (23%), Gaps = 25/143 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYSV 70 P I I R L Y + G G + Q P Sbjct: 3 PGTIVIDTANRFCYLVLDNGQAL-----RYGVGIGREGFAWSGRAVIQYKRQWPRWTPPD 57 Query: 71 QPNQLNPDSRYYLA----INIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSV 113 + P+ Y A + G N Y +HG VS Sbjct: 58 EMVARQPELVQYSAKNGGMAPGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGKAVSS 117 Query: 114 GCYAMTDAQIDEIFAFVRDAFVG 136 GC + I +++ V Sbjct: 118 GCVRFLNQDIIDLYDRVPAKTPI 140 >gi|68190214|gb|EAN04874.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 204 Score = 81.0 bits (199), Expect = 2e-14 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 23/146 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + ++ I + ER L L + Y I GL G Sbjct: 54 LPQVVRTPYDYLAGTIIVVPRERFLYLVDGAGFA-----RRYGIGVGKAGLAFSGSAIIG 108 Query: 59 GDFQSPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA-- 109 + P + + +P +RY + G N Y + IHG Sbjct: 109 RKAKWPSWRPTDNMIRRDPKKYARYAGGVPGGPNNPLGSRALYLYRNGRDTLYRIHGTTE 168 Query: 110 ------CVSVGCYAMTDAQIDEIFAF 129 VS GC M + +++++ Sbjct: 169 PWTIGKAVSNGCVRMVNEHVEDLYER 194 >gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 386 Score = 80.6 bits (198), Expect = 2e-14 Identities = 18/136 (13%), Positives = 42/136 (30%), Gaps = 26/136 (19%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + E+K +++ ++ L K++ G ++P G ++VQ Sbjct: 264 YLVFVNIAEQKTYVYEGSKN-DWTLDKTFTCSTGIEGK---------ETPVGVFTVQNRA 313 Query: 75 LN-------PDSRYYLAINIGF-----PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQ 122 +YY+ + P D+ G S GC ++ Sbjct: 314 PWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDKTTVSDPTL----GVPSSHGCIRLSVED 369 Query: 123 IDEIFAFVRDAFVGGQ 138 ++ V++ Sbjct: 370 SKWLYDNVQNGSKIII 385 >gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 80.6 bits (198), Expect = 2e-14 Identities = 21/147 (14%), Positives = 38/147 (25%), Gaps = 23/147 (15%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQ 62 + Q P I + + R L + Y + G R + Sbjct: 59 VDYQRKEQPGTILVDTDARYLYFVLPEGKAI-----RYGVAVGEEAMAFSGVARVGRLAE 113 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------- 110 P+ + Y + G N Y IHG Sbjct: 114 WPDWVPTADIQAR--LGPYPARVAGGPANPLGARGIYLFVGNKDTLYRIHGTNQPEYIGQ 171 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC M + + +++ V+ + Sbjct: 172 AISSGCIRMRNEDVIDLYDRVKLNSMV 198 >gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 153 Score = 80.6 bits (198), Expect = 2e-14 Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + IKS+ + +P+G + + N Sbjct: 31 LIVNTQLNKMDYYQN-----GKFIKSFTVATGKAAT---------PTPKGTFQIVNKIKN 76 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGACV--------SVGCYAMTDAQ 122 N G G IHG ++GC M + Sbjct: 77 RPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNND 136 Query: 123 IDEIFAFVRDAFVGGQP 139 I +F + Sbjct: 137 IHWLFERIPQQATVTVK 153 >ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 Length = 160 Score = 80.6 bits (198), Expect = 2e-14 Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 47/163 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY------- 68 ++ + + + L L ++ K + + G+G G +Q+P G++ Sbjct: 5 WVWVGVKSQTLRLLDD----WGRIQKEFTVSTAKNGVG--ETSGSYQTPRGWHAVCEKLG 58 Query: 69 ------SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKY 103 ++ + +Y +++ +PN D + Sbjct: 59 AGAEANTIIFRRQVTPWKYTPELHVQYPNK-DWILTRILWLCGQEPGLNQGGNVDSYDRA 117 Query: 104 LMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG S+GC M + + E+F V + Sbjct: 118 IYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNGTDVWI 160 >gi|67934041|ref|ZP_00527134.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 317 Score = 80.6 bits (198), Expect = 2e-14 Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 19/147 (12%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQS 63 P + + K E + + +L+ Y S +G + +G ++ Sbjct: 176 VMTPPQAARVVVSKSESSVRAYDEG----GKLLAFYSATIGSEHDPLPIGEWKIKGVGRN 231 Query: 64 PEGFY--SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SV 113 P+ Y + + + + R L P + ++ IHG S Sbjct: 232 PKFHYNAELFWDAKDRNDRETLPPGPNNPVGLVWI-DLSKEHYGIHGTPEPGKIGHTESH 290 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC +T+ E+ A VR Sbjct: 291 GCIRLTNWDALELAAMVRPGTPASLKE 317 >gi|29654387|ref|NP_820079.1| hypothetical protein CBU1080 [Coxiella burnetii RSA 493] Length = 160 Score = 80.2 bits (197), Expect = 3e-14 Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 48/160 (30%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN----- 73 + + L L++ Q+IK Y + G G ++P G++ ++ Sbjct: 7 VDIPSQTLTLFRDN-----QVIKRYRVSTARNGPGELINS--EKTPRGWHIIRAKVGEGC 59 Query: 74 -------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKYLMI 106 + P Y A+ +P+ D +Y+ I Sbjct: 60 PPNTVFVERRPTGEVYSPALKRRYPD-RDWVLTRILWLSGLEVGKNRLGNVDTMRRYVYI 118 Query: 107 HGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 HG+ S GC M + I E+F V Sbjct: 119 HGSGDEIIMGKPGSRGCIRMHNHDIIELFDEVCAGDRVYI 158 >ErfK_YbiS_YhnG_Q89M18_213-348_PF03734.4 Length = 136 Score = 80.2 bits (197), Expect = 3e-14 Identities = 27/148 (18%), Positives = 40/148 (27%), Gaps = 35/148 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K + ++L+ LI YP S D SP G V Sbjct: 2 KADRVEVDKVRQTVKLFDKSN----ALIGFYPATVGSE---------DKPSPSGTLKVTE 48 Query: 73 NQLNPDSRYYLAIN-------------IGFPNAYDRAHGY-TGKYLMIHGACV------- 111 NP RY A + G N + + IHG Sbjct: 49 VSKNPLYRYNPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAEGYGIHGTPSPDKISKA 108 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ + + V Sbjct: 109 ESHGCVRLTNWDAERVAGSVAKGTPVAF 136 >ErfK_YbiS_YhnG_Q83CN1_2-158_PF03734.4 Length = 157 Score = 80.2 bits (197), Expect = 3e-14 Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 48/160 (30%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN----- 73 + + L L++ Q+IK Y + G G ++P G++ ++ Sbjct: 6 VDIPSQTLTLFRDN-----QVIKRYRVSTARNGPGELINS--EKTPRGWHIIRAKVGEGC 58 Query: 74 -------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKYLMI 106 + P Y A+ +P+ D +Y+ I Sbjct: 59 PPNTVFVERRPTGEVYSPALKRRYPD-RDWVLTRILWLSGLEVGKNRLGNVDTMRRYVYI 117 Query: 107 HGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 HG+ S GC M + I E+F V Sbjct: 118 HGSGDEIIMGKPGSRGCIRMHNHDIIELFDEVCAGDRVYI 157 >ErfK_YbiS_YhnG_Q8PH92_78-212_PF03734.4 Length = 135 Score = 79.9 bits (196), Expect = 3e-14 Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 19/129 (14%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ + ++ +P+ S +G + G + P Y Sbjct: 2 KPAKLVVDKSDSTLRLFD----ADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVFKY 57 Query: 69 --SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAM 118 + + + + L P + + +HG S GC + Sbjct: 58 NPKLFWDAKKGEQKATLPAGPNNPVGRVWI-DLSKPHYGLHGTPEPGHVGKTESHGCVRL 116 Query: 119 TDAQIDEIF 127 T+ + + Sbjct: 117 TNWDVVALA 125 >gi|15075231|emb|CAC46787.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 454 Score = 79.9 bits (196), Expect = 3e-14 Identities = 27/151 (17%), Positives = 39/151 (25%), Gaps = 35/151 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + +LI +YP S D SP G V+ Sbjct: 317 GKVARIVADKARKQVLAYD----EAGKLIAAYPSTIGSS---------DTPSPSGTVHVE 363 Query: 72 PNQLNPDSRYYLAIN-------------IGFPNAYDRAH-GYTGKYLMIHGACV------ 111 +P Y IN G + IHG Sbjct: 364 RIAFDPGYTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 423 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ E+ V Sbjct: 424 TQSHGCVRLTNWDATELGKMVSTGVTVEFVD 454 >gi|15025657|gb|AAK80578.1| Uncharacterized protein, ErfK family [Clostridium acetobutylicum ATCC 824] Length = 229 Score = 79.9 bits (196), Expect = 3e-14 Identities = 19/139 (13%), Positives = 48/139 (34%), Gaps = 23/139 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P+ I + E++++ ++ AK +L+ S+ G + +P+G Y++ Sbjct: 104 AEKPLRIDVDLEKQRVNIYDAKS----RLVNSFVCSSGMNG---------YDTPKGEYTI 150 Query: 71 QPN-------QLNPDSRYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 + + N + Y++ + +D+ + G S GC + Sbjct: 151 KERGYSFYSQKYNEGAYYWVQFMGNYLFHSVPFDKNKNIEPNEVNKLGNKASHGCIRLPI 210 Query: 121 AQIDEIFAFVRDAFVGGQP 139 I+ + + Sbjct: 211 DNAKWIYDNIPRGTLVNIK 229 >ErfK_YbiS_YhnG_Q81XG3_27-152_PF03734.4 Length = 126 Score = 79.9 bits (196), Expect = 4e-14 Identities = 18/136 (13%), Positives = 37/136 (27%), Gaps = 28/136 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + IKS+ + +P+G + + N Sbjct: 5 LIVNTQLNKMDYYQN-----GKFIKSFTVATGKAAT---------PTPKGTFKIVNKIKN 50 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGACV--------SVGCYAMTDAQ 122 N G G IHG ++GC M + Sbjct: 51 RPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNND 110 Query: 123 IDEIFAFVRDAFVGGQ 138 I +F + Sbjct: 111 IHWLFERIPQQATVTV 126 >ErfK_YbiS_YhnG_Q8P5X3_187-321_PF03734.4 Length = 135 Score = 79.9 bits (196), Expect = 4e-14 Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 17/137 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + I K + L L+ + ++ +P+ S +G + G + P+ Y Sbjct: 2 KPAKLVIDKSDSTLRLFD----AQGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKFHY 57 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + + G N R + + +HG S GC +T Sbjct: 58 NPKLFWDAKPGEGKATLPPGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 117 Query: 120 DAQIDEIFAFVRDAFVG 136 + + + + V + Sbjct: 118 NWDVVNLASVVDASVPV 134 >gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 79.5 bits (195), Expect = 4e-14 Identities = 19/152 (12%), Positives = 35/152 (23%), Gaps = 26/152 (17%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 + + SP I + + L Y I + Sbjct: 56 FRRAIVEYHRKESPGSIVVDSDNHYLYYVLDGGKAI-----RYGITVGEEAMAWSGIAKV 110 Query: 61 F---QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P + Y + G N Y IHG Sbjct: 111 GSMTEWPAWHPTPGEISRLGVPTY---VAPGPDNPMGSRAMYLYSGGKDTLFRIHGTNQP 167 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC +T+ +++ V+ + Sbjct: 168 EYIGASISSGCIRLTNEDAIDLYGRVKVGTIV 199 >ErfK_YbiS_YhnG_Q5ZV58_5-145_PF03734.4 Length = 141 Score = 79.5 bits (195), Expect = 4e-14 Identities = 24/141 (17%), Positives = 39/141 (27%), Gaps = 43/141 (30%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV------------QPNQLNPDSRYYL-A 84 LI +Y I G+G K G +P G++ + Y + Sbjct: 4 HLIANYAISSGKNGVGEKINSGC--TPRGWHKIYSILGIDLPINSVMVAREWTGEIYSES 61 Query: 85 INIGFPNAYDRAHGY-------------------TGKYLMIHGACV--------SVGCYA 117 + FP D +Y+ IHG S GC Sbjct: 62 LATQFP-ERDWILTRVLQLDGLEPGRNKGGDVDTLHRYIYIHGTPDTTQLGIPGSHGCIR 120 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 + + I E+ A+ + Sbjct: 121 LNNDAIIELAAWATKNTLVYI 141 >gi|69935211|ref|ZP_00630191.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 192 Score = 79.5 bits (195), Expect = 4e-14 Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 24/153 (15%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 E+ + I + ++ L A Y + L K R + Sbjct: 42 PTEVSIRNDFEVGSIVVVSKDFFLYHVVAPGRAV-----RYGVAVGKAELVWKGRATVGR 96 Query: 63 ---SPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAHGYT------GKYLMIHGA-- 109 P + + NP +R+ + G N Y + IHG Sbjct: 97 KTEWPSWTPTPAMIKRNPGQYARWADGMPGGPTNPLGARALYLYDAKGNDTSIRIHGTTE 156 Query: 110 ------CVSVGCYAMTDAQIDEIFAFVRDAFVG 136 VS GC M + + ++F V Sbjct: 157 PNSIGRAVSNGCIRMRNEAVMDLFEQVPIGTPV 189 >ErfK_YbiS_YhnG_Q92K34_317-452_PF03734.4 Length = 136 Score = 79.5 bits (195), Expect = 4e-14 Identities = 27/149 (18%), Positives = 39/149 (26%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + +LI +YP S D SP G V+ Sbjct: 1 GKVARIVADKARKQVLAYD----EAGKLIAAYPSTIGSS---------DTPSPSGTVHVE 47 Query: 72 PNQLNPDSRYYLAIN-------------IGFPNAYDRAH-GYTGKYLMIHGACV------ 111 +P Y IN G + IHG Sbjct: 48 RIAFDPGYTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 107 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ V Sbjct: 108 TQSHGCVRLTNWDATELGKMVSTGVTVEF 136 >gi|69927652|ref|ZP_00624813.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 249 Score = 79.5 bits (195), Expect = 5e-14 Identities = 21/152 (13%), Positives = 36/152 (23%), Gaps = 26/152 (17%) Query: 3 SKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRR 57 + P I + + L Y I G + Sbjct: 80 FRRAIVDYHRKETPGSIMVDSDNHYLYYVLDGGKAI-----RYGITVGEEAMAWSGIAKV 134 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC-- 110 + P + +Y + G N Y IHG Sbjct: 135 GAKTEWPSWHPTPGEIARLGVPKY---VAPGPDNPMGSRALYLYANGKDTLFRIHGTNQP 191 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +S GC MT+ + +++ V+ V Sbjct: 192 EYIGASISSGCIRMTNEDVIDLYDRVKMGTVV 223 >gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesorhizobium loti MAFF303099] Length = 376 Score = 79.5 bits (195), Expect = 5e-14 Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + K E ++ + + L+ ++P S + SP G ++V+ Sbjct: 240 GKAVRVEVDKAEGQVRAY----AEDGSLLAAFPATIGSE---------ENPSPSGMHTVR 286 Query: 72 PNQLNPDSRYY-------------LAINIGFPNAYDRAHG-YTGKYLMIHGACV------ 111 NP Y L + G + IHG Sbjct: 287 AVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEPSFGIHGTPEPARIDK 346 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ + Sbjct: 347 TGSHGCVRLTNWDAGELGKLLSPGVPVQF 375 >gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 219 Score = 79.5 bits (195), Expect = 5e-14 Identities = 21/149 (14%), Positives = 43/149 (28%), Gaps = 32/149 (21%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 P + + R++ + + + + + +P+ +P G Sbjct: 83 SASPEISTKVVLLLGRREISVIR-----DGEKLGPWPVAIGDPRT---------PTPTGV 128 Query: 68 YSVQPNQLNPD------SRYYLAINIGFP--NAYDRAHGYTGKYLMIHGACV-------- 111 + V+ +NP R AI + P + + IHG Sbjct: 129 FKVENKVINPQYQSTKSGRVNPAIGVASPLGDRWIGFLQSGQNQFGIHGTPWPYWVNAKA 188 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC M A + ++F V Sbjct: 189 AVTNGCVRMLHAHVRQLFDVVEVGTTVEI 217 >ErfK_YbiS_YhnG_Q89MH4_65-200_PF03734.4 Length = 136 Score = 79.5 bits (195), Expect = 5e-14 Identities = 20/141 (14%), Positives = 36/141 (25%), Gaps = 23/141 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 P I + + R L + Y + G R + P+ Sbjct: 1 EQPGTILVDTDARYLYFVLPEGKAI-----RYGVAVGEEAMAFSGVARVGRLAEWPDWVP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVGC 115 + Y + G N Y IHG +S GC Sbjct: 56 TADIQAR--LGPYPARVAGGPANPLGARGIYLFVGNKDTLYRIHGTNQPEYIGQAISSGC 113 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 M + + +++ V+ + Sbjct: 114 IRMRNEDVIDLYDRVKLNSMV 134 >gi|23006804|ref|ZP_00048959.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 175 Score = 79.5 bits (195), Expect = 5e-14 Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 25/147 (17%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 P + + P +P I + ++R+L L + Y + G K Sbjct: 32 PKYRRQEVAYTGPEAPGTIVVDIDKRQLALVQEGGTAI-----RYGVGVGKAGFSWKGDA 86 Query: 59 GDFQ---SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-------- 107 + P+ + LNP I N Y + H Sbjct: 87 RIARKGVWPDWSPTTTMVSLNPGIERSRKGGID--NPLGARALYLYQGQPRHPVPHPRHQ 144 Query: 108 -----GACVSVGCYAMTDAQIDEIFAF 129 G +S GC M + I ++ Sbjct: 145 RAWSIGEQMSSGCVRMHNEDIVDLTER 171 >ErfK_YbiS_YhnG_Q9JT27_44-178_PF03734.4 Length = 135 Score = 79.1 bits (194), Expect = 6e-14 Identities = 24/141 (17%), Positives = 37/141 (26%), Gaps = 36/141 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +++L L+ + +L K YP+ Q+ G + + N Sbjct: 6 VFINIPQQRLFLY-----TDGKLTKVYPVAVGRAMT---------QTNLGEHKIGAKAYN 51 Query: 77 PDSRYYLAI-----------NIGFPNAYDR---AHGYTGKYLMIHGACV--------SVG 114 P +I G N G L IHG S G Sbjct: 52 PVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHG 111 Query: 115 CYAMTDAQIDEIFAFVRDAFV 135 C M E + Sbjct: 112 CVRMKSPDALEFAKTIASGSP 132 >gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter pomeroyi DSS-3] Length = 185 Score = 79.1 bits (194), Expect = 7e-14 Identities = 22/159 (13%), Positives = 40/159 (25%), Gaps = 26/159 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRR 57 P + ++ + P + I L + Y G G Sbjct: 31 PTPQVVRIKKQFEPGRLLILPRSFYLYYVTEEREAI-----RYGCGVGKAGLEFTGTATI 85 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYL-----AINIGFPNAYDRAHGYT-----GKYLMIH 107 + + P + + + +P + G N Y Y IH Sbjct: 86 DVKKEWPTWRPTPEMIERDPRTYAKFVDNNYIQPGGPENPLGARALYLFQNGVDTYFRIH 145 Query: 108 GA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G S GC M + + +++ V V Sbjct: 146 GTTQPQTIGHAASNGCIRMLNEHVIDLYNRVPLGTVVTV 184 >gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [Brucella abortus biovar 1 str. 9-941] Length = 408 Score = 79.1 bits (194), Expect = 7e-14 Identities = 26/150 (17%), Positives = 41/150 (27%), Gaps = 35/150 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K +++ +L+ +YP S D SP G V+ Sbjct: 272 KVARIIADKGRKQVR----GYDENGKLVVAYPSTIGSS---------DNPSPSGIVQVER 318 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 +NP+ Y L I G + IHG Sbjct: 319 IAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGIHGTPAPSRIGKI 378 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +E+ V+ Sbjct: 379 SSHGCVRLTNWDAEELAKLVKPGVTVEFTE 408 >gi|68205981|ref|ZP_00558177.1| ErfK/YbiS/YcfS/YnhG [Desulfitobacterium hafniense DCB-2] Length = 115 Score = 78.7 bits (193), Expect = 7e-14 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 35/123 (28%) Query: 27 ELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRY-YLAI 85 EL+ QL+ YP +P G Y+V +NP + + Sbjct: 19 ELYDGN-----QLLACYPCAVGKSST---------PTPLGNYAVATKVMNPGGAFGTRWL 64 Query: 86 NIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGG 137 + P+ IHG S+GC M + ++ ++ V Sbjct: 65 GLSLPD------------YGIHGTNKPASIGTQASLGCIRMHNHHVEALYDQVGAGTPVI 112 Query: 138 QPS 140 Sbjct: 113 ITE 115 >gi|67154504|ref|ZP_00416249.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 174 Score = 78.7 bits (193), Expect = 8e-14 Identities = 22/168 (13%), Positives = 44/168 (26%), Gaps = 48/168 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++ L + +L+ + G G R G +P G + V+ Sbjct: 5 DFLHISLADQALY-----GFADGRLLLRLAVSTALNGPG--ERSGSGCTPRGLHQVRAKI 57 Query: 74 -----------QLNPDSR-YYLAINIGFPNAYDRAHGYT-------------------GK 102 + ++ FP D + Sbjct: 58 GAGLPAGAVLRGRRWTGEVWTPELHEAFPG-RDWILSRILWLSGCEIGRNRLGPVDTFRR 116 Query: 103 YLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 Y+ +HG S GC + +A + E++ V Sbjct: 117 YIYLHGTPDSEPMGVPRSHGCVRLRNADLLELYPRVPLHCRVRIEEAP 164 >ErfK_YbiS_YhnG_Q6N5E1_100-211_PF03734.4 Length = 112 Score = 78.3 bits (192), Expect = 9e-14 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 25/128 (19%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 PV I + E++KL ++ A L P+ G +P G +SV Sbjct: 3 PVVIAVSIEQQKLRVYDANG-----LFAETPVSTGMRG---------HSTPMGVFSVIQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFA 128 S Y + + + +H G S GC M +++ Sbjct: 49 SKYHRSNIYSGAPMPYMQRITW------SGIALHAGALPGYPASHGCIRMPMTFAVKMWG 102 Query: 129 FVRDAFVG 136 + R Sbjct: 103 WTRMGARV 110 >gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 230 Score = 78.3 bits (192), Expect = 1e-13 Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 39/151 (25%) Query: 1 PVSKELKQQL----PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR 56 P + Q L PV + + ER L +++ + ++ ++Y I P Sbjct: 105 PTDLYVDQILCIPVAPPPVTVNVNVAERTLTVYR-----DGRIYRTYRIAL-ENPASPI- 157 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC----- 110 P G ++V Q++P G + IHG Sbjct: 158 -------PRGTFTVLNKQVDPG------------VEMGARWIGLSEAGFGIHGTNTPEFI 198 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + M++ + E+F V + Sbjct: 199 DVVSTGNSIVMSNEDVSELFNLVPVGTIVTI 229 >ErfK_YbiS_YhnG_Q89MP2_90-201_PF03734.4 Length = 112 Score = 78.3 bits (192), Expect = 1e-13 Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 15/123 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ I + + +K+ ++ + P+ G +P G +SV Sbjct: 3 PLVIVVSIDRQKVTVYDTNG-----VFAESPVSTGMKG---------HSTPMGVFSVIQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 S Y + + + + + G S GC M A +++ + + Sbjct: 49 HKFHHSNIYSGAPMPYMQRITWSGVAMHAGV-LPGYPASHGCIRMPMAFAVKMWNWTKMG 107 Query: 134 FVG 136 Sbjct: 108 ARV 110 >ErfK_YbiS_YhnG_Q8FYK9_271-406_PF03734.4 Length = 136 Score = 77.9 bits (191), Expect = 1e-13 Identities = 26/148 (17%), Positives = 41/148 (27%), Gaps = 35/148 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K +++ +L+ +YP S D SP G V+ Sbjct: 2 KVARIIADKGRKQVR----GYDENGKLVVAYPSTIGSS---------DNPSPSGIVQVER 48 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 +NP+ Y L I G + IHG Sbjct: 49 IAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGIHGTPAPSRIGKT 108 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ +E+ V+ Sbjct: 109 SSHGCVRLTNWDAEELAKLVKPGVTVEF 136 >gi|67918178|ref|ZP_00511779.1| ErfK/YbiS/YcfS/YnhG [Chlorobium limicola DSM 245] Length = 270 Score = 77.5 bits (190), Expect = 2e-13 Identities = 20/149 (13%), Positives = 49/149 (32%), Gaps = 25/149 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 P+ + + P + + ER++ ++ + +L+ P+ Sbjct: 136 PIDVQKASRYVPVPELLANSRGEREIRIFLDRQYFGAYEKGRLLFWGPVSSGRK------ 189 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 +++P G + V Q + ++I + NA +H G Sbjct: 190 ---TYRTPPGKFFVNYKQRH-------KLSIKYDNAPMPFSINFYGGYFMHQQSLPGYPA 239 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC + +++F +V+ + Sbjct: 240 SHGCVRLLMTDAEKLFNWVKPRDPVTVEA 268 >gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacillus clausii KSM-K16] Length = 171 Score = 77.5 bits (190), Expect = 2e-13 Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 34/153 (22%) Query: 9 QLPGSPVY------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 Q+PG + + + L L +A E P+ G + Sbjct: 18 QMPGDTDWEVEKASVIVNVRTNTLALIEANHIAEIH-----PVATGKKG---------DE 63 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC------ 110 +P G ++V P R N G G+ +HG Sbjct: 64 TPLGQFTVLVKVEQPYYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPGSIG 123 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC + + I+ ++ + + Sbjct: 124 YSASAGCIRLANPTIERLYQKIDIGSKIFIVNE 156 >ErfK_YbiS_YhnG_Q8UFV4_31-142_PF03734.4 Length = 112 Score = 77.5 bits (190), Expect = 2e-13 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 25/127 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ++ L L++ ++I + + G ++P G +S+ + Sbjct: 6 ILVSKSDQSLSLYEN-----GEIIATSKVSTGKAG---------HETPSGIFSILEKRKY 51 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFAFVR 131 +S Y A P + + T + +H S GC + +F R Sbjct: 52 HESNIYSAA----PMPFMQRL--TWSGIALHEGKVPNYPASHGCVRLPSKFAKSLFGDTR 105 Query: 132 DAFVGGQ 138 Sbjct: 106 AGVHVII 112 >ErfK_YbiS_YhnG_Q92US7_190-325_PF03734.4 Length = 136 Score = 77.5 bits (190), Expect = 2e-13 Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 17/135 (12%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREGDFQSPEGF 67 G I + K ++ + + + +YP S G G + +G + P Sbjct: 1 GEVKRIEVRKRAGQVLAF----AEDGSPLAAYPASIGSEGSPSPTGTHKVKGVARMPPYE 56 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAM 118 Y N D+ L + G N T IHG S GC + Sbjct: 57 YDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDLTEPTYGIHGTPEPSLIDKAQSHGCVRL 116 Query: 119 TDAQIDEIFAFVRDA 133 T+ +E+ A V+ Sbjct: 117 TNWDAEELAAMVKPG 131 >ErfK_YbiS_YhnG_Q83BD4_91-228_PF03734.4 Length = 138 Score = 77.5 bits (190), Expect = 2e-13 Identities = 20/146 (13%), Positives = 34/146 (23%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +L + +YP+ ++ +P G + N Sbjct: 6 IVINLAAMRLYYFPKGKN----YFYTYPVGIGR---------FNWSTPLGKLHIIQKIKN 52 Query: 77 P--------------DSRYYLAINIGFP-NAYDRAHGY-TGKYLMIHGAC--------VS 112 P + + P N + +IHG S Sbjct: 53 PVWVVPDSILRYRQENGDPVPKMMPSGPENPLGYYALRLSQPTYLIHGTNDPSSVGRRSS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + I +F V Sbjct: 113 AGCIHLYPEDIKALFGMVSVDTPVLI 138 >gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] Length = 348 Score = 77.2 bits (189), Expect = 2e-13 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 31/141 (21%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 P PV I + E+K +++ + I + G ++P G +S Sbjct: 53 SPQGPVTIVVSLTEQKAYIYRNGI-----AIGVSTLSSGKKG---------RETPTGVFS 98 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQID 124 + ++ S Y + + + + +H G S GC + A Sbjct: 99 ILQKSVDHKSDLYNSAPMPYMQRLTW------DGIALHAGNLPGYPASHGCIRLPMAFAK 152 Query: 125 EIFAFVRDAFVGGQPSVQVSI 145 +++ G S V I Sbjct: 153 KLYGIT------GFSSTTVII 167 >gi|68180217|ref|ZP_00553200.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1] Length = 206 Score = 77.2 bits (189), Expect = 2e-13 Identities = 25/137 (18%), Positives = 41/137 (29%), Gaps = 23/137 (16%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYSVQPN 73 I + R L +A Y + GL G R + + P + Sbjct: 70 IHVDPTSRFLYHIEAGGTAM-----RYGVAVGRAGLYQPGNFRIQRVAEWPSWTPTANMI 124 Query: 74 QLNPD--SRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVGCYAM 118 + P+ ++Y + G N Y YL IHG S GC + Sbjct: 125 RREPEIYAQYAGGVPGGPDNPLGARALYLYAGGRDTYLRIHGTPQPWSIGTSASSGCVRL 184 Query: 119 TDAQIDEIFAFVRDAFV 135 + + ++ VR Sbjct: 185 VNDHVIQLAQNVRSGNR 201 >ErfK_YbiS_YhnG_Q8XPD9_262-385_PF03734.4 Length = 124 Score = 76.8 bits (188), Expect = 3e-13 Identities = 18/136 (13%), Positives = 42/136 (30%), Gaps = 26/136 (19%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + E+K +++ ++ L K++ G ++P G ++VQ Sbjct: 3 YLVFVNIAEQKTYVYEGSKN-DWTLDKTFTCSTGIEGK---------ETPVGVFTVQNRA 52 Query: 75 LN-------PDSRYYLAINIGF-----PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQ 122 +YY+ + P D+ G S GC ++ Sbjct: 53 PWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDKTTVSDPTL----GVPSSHGCIRLSVED 108 Query: 123 IDEIFAFVRDAFVGGQ 138 ++ V++ Sbjct: 109 SKWLYDNVQNGSKIII 124 >gi|68551900|ref|ZP_00591294.1| hypothetical protein PaesDRAFT_2069 [Prosthecochloris aestuarii DSM 271] Length = 124 Score = 76.8 bits (188), Expect = 3e-13 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 LP + + K++R L L+ + ++KSY I G KR GD ++PEG Y Sbjct: 44 SLPVEADSLVVSKDDRLLHLYS-----DGAVVKSYTIALGFSPRGAKRYLGDGRTPEGRY 98 Query: 69 SVQPNQLNPDSRYYLAINIGF 89 ++ NP SRY+L+++I Sbjct: 99 TII--GRNPQSRYHLSLSISV 117 >ErfK_YbiS_YhnG_Q89RZ1_67-201_PF03734.4 Length = 135 Score = 76.8 bits (188), Expect = 3e-13 Identities = 19/141 (13%), Positives = 33/141 (23%), Gaps = 24/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF---QSPEGFY 68 SP I + + L Y I + + P Sbjct: 1 ESPGSIVVDSDNHYLYYVLDGGKAI-----RYGITVGEEAMAWSGIAKVGSMTEWPAWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGC 115 + Y + G N Y IHG +S GC Sbjct: 56 TPGEISRLGVPTY---VAPGPDNPMGSRAMYLYSGGKDTLFRIHGTNQPEYIGASISSGC 112 Query: 116 YAMTDAQIDEIFAFVRDAFVG 136 +T+ +++ V+ + Sbjct: 113 IRLTNEDAIDLYGRVKVGTIV 133 >gi|69937030|ref|ZP_00631751.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 493 Score = 76.8 bits (188), Expect = 3e-13 Identities = 30/140 (21%), Positives = 42/140 (30%), Gaps = 35/140 (25%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I + KE R++ + AK ++ YP S D SP G + V Sbjct: 219 VTRIIVDKETRRVAAYDAKGN----MVADYPATVGSA---------DTPSPHGNHVVDAV 265 Query: 74 QLNPDSRYY-------------LAINIGFPNAYDRAHG-YTGKYLMIHGA--------CV 111 LNP Y L I G + IHG Sbjct: 266 ALNPTYTYNPHRNFKQGQNDRVLTIPPGPNGPVGNVWIDLSEPTYGIHGTATPSQLFLNQ 325 Query: 112 SVGCYAMTDAQIDEIFAFVR 131 S GC +T+ E+ V+ Sbjct: 326 SHGCVRLTNWDAWELAHMVK 345 >gi|61101279|ref|ZP_00376735.1| hypothetical protein ELI1976 [Erythrobacter litoralis HTCC2594] Length = 425 Score = 76.8 bits (188), Expect = 3e-13 Identities = 22/142 (15%), Positives = 38/142 (26%), Gaps = 18/142 (12%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEG 66 I + K E L+ +K L+ + + S LG G+ +P Sbjct: 290 QPEVDRIVVSKSEDTLKAYKGD-----TLVAMFTVSSGSSEFPLPLGEWDIVGEAYNPPY 344 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAM 118 Y + Y L + ++ IHG S GC + Sbjct: 345 SYDPEVLGQGEGETYTLPPGPNGMVGVVWI-DLSKEHYGIHGTPEPETIGRAQSSGCVRL 403 Query: 119 TDAQIDEIFAFVRDAFVGGQPS 140 T+ + V + Sbjct: 404 TNWDAARLSQMVSTDTAVEFVA 425 >gi|34497388|ref|NP_901603.1| hypothetical protein CV1933 [Chromobacterium violaceum ATCC 12472] Length = 301 Score = 76.4 bits (187), Expect = 4e-13 Identities = 19/174 (10%), Positives = 40/174 (22%), Gaps = 46/174 (26%) Query: 2 VSKELKQQLPGSPVY------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 V + + + + +L L++ + +L + +P+ Sbjct: 16 VPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQ-----DGKLARIFPVAVGKMLT--- 67 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAI------------------NIGFPNAYDRAH 97 Q+P G + + P +I Sbjct: 68 ------QTPTGSFDITGIYRAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRF 121 Query: 98 GYTGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 G + L HG S GC + + E+ V + Sbjct: 122 GESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELARTVSRGDAVTVAYQTI 175 >gi|48848818|ref|ZP_00303063.1| COG1376: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 337 Score = 76.0 bits (186), Expect = 5e-13 Identities = 22/151 (14%), Positives = 41/151 (27%), Gaps = 35/151 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 I + + L+ + A +L+ + + S P G + + Sbjct: 199 QPKAGRIVVSEHAGTLKAFDASN----KLVALFTVTTGSE---------HDPLPLGNWKI 245 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK--------------YLMIHGACV----- 111 + NP RY ++ P++ G + IHG Sbjct: 246 YSSSFNPHFRYDASLFWDVPDSKGEHLLPPGPNGPVGVVWIDLSKEHYGIHGTPEPQTIG 305 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC +T+ + V A Sbjct: 306 RTESHGCVRLTNWDAARLALMVDGATKVSFV 336 >gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 192 Score = 76.0 bits (186), Expect = 5e-13 Identities = 23/150 (15%), Positives = 44/150 (29%), Gaps = 45/150 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + R+L + + + LIKS+ + G ++P G + V + Sbjct: 52 LVLDRRSRRLLVLE-----DGSLIKSFSVAVGMPGW---------ETPTGEFQVLSKTPH 97 Query: 77 PDSRYYLA---INIGFPNAYDRAH--------------GYTGKYL------MIHGAC--- 110 P + + I G N G + HG Sbjct: 98 PIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRW 157 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFV 135 VS GC + + I ++ V+ Sbjct: 158 TVGRAVSHGCVRLFEEDIQSLYRLVKIGTP 187 >gi|61101139|ref|ZP_00376596.1| hypothetical protein ELI1837 [Erythrobacter litoralis HTCC2594] Length = 315 Score = 76.0 bits (186), Expect = 5e-13 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 26/136 (19%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 V I I + + +++ + +L +S P+ G ++P G +++ + Sbjct: 66 VVIVISNASQHMHVFQ-----DGRLWRSSPVSTGKRGK---------ETPTGVFAILQKR 111 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFAF 129 S Y P + + + G + IH G S GC + +++F Sbjct: 112 RFHRSNLYS----NAPMPFMQRLTWDG--IAIHAGRLPGYPASHGCIRLPSNFANDLFRL 165 Query: 130 VR-DAFVGGQPSVQVS 144 + + + Sbjct: 166 TGFTSTGVIVTNDPLE 181 >gi|22959005|ref|ZP_00006665.1| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 183 Score = 76.0 bits (186), Expect = 6e-13 Identities = 22/144 (15%), Positives = 39/144 (27%), Gaps = 32/144 (22%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I R L W G+ + + YP + + + G+ + + Sbjct: 53 GAIVADTTSRALHFW----SGDGRDYRIYPTSV---PISEEL------TKRGYTEIVRKK 99 Query: 75 LNPDSRYYLAINIGFP----------NAYDRAHGYTG-KYLMIHGA--------CVSVGC 115 + P + +P N Y G +IHG S GC Sbjct: 100 VGPSWTPTPSQMERYPDWKPVGPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGC 159 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQP 139 + + +I E+F Sbjct: 160 IGLYNEKIAELFELCPIGTQVRVI 183 >ErfK_YbiS_YhnG_Q9I5J7_55-167_PF03734.4 Length = 113 Score = 75.6 bits (185), Expect = 6e-13 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 31/137 (22%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 PV I + E+K +++ + I + G ++P G +S+ Sbjct: 3 PVTIVVSLTEQKAYIYRNGI-----AIGVSTLSSGKKG---------RETPTGVFSILQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFA 128 ++ S Y + + + + +H G S GC + A +++ Sbjct: 49 SVDHKSDLYNSAPMPYMQRLTW------DGIALHAGNLPGYPASHGCIRLPMAFAKKLYG 102 Query: 129 FVRDAFVGGQPSVQVSI 145 G S V I Sbjct: 103 IT------GFSSTTVII 113 >gi|76165915|gb|EAO60044.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aurantiacus J-10-fl] Length = 374 Score = 75.6 bits (185), Expect = 6e-13 Identities = 15/134 (11%), Positives = 32/134 (23%), Gaps = 25/134 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + ++ L + ++I P+ G +P G + + Sbjct: 255 LIVVDLSDQWLYAVEGD-----RIIFDAPVSTGRDGFN---------TPVGTFFIYAKVR 300 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------SVGCYAMTDAQIDE 125 R A + Y + +HG S GC + Sbjct: 301 EQTMRG-CAGGECWVVPRVPHAMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAW 359 Query: 126 IFAFVRDAFVGGQP 139 ++ + Sbjct: 360 LYEWAPVGTPVVVR 373 >ErfK_YbiS_YhnG_Q97FU5_105-228_PF03734.4 Length = 124 Score = 75.2 bits (184), Expect = 1e-12 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 23/137 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P+ I + E++++ ++ AK +L+ S+ G + +P+G Y+++ Sbjct: 1 EKPLRIDVDLEKQRVNIYDAKS----RLVNSFVCSSGMNG---------YDTPKGEYTIK 47 Query: 72 PN-------QLNPDSRYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 + N + Y++ + +D+ + G S GC + Sbjct: 48 ERGYSFYSQKYNEGAYYWVQFMGNYLFHSVPFDKNKNIEPNEVNKLGNKASHGCIRLPID 107 Query: 122 QIDEIFAFVRDAFVGGQ 138 I+ + + Sbjct: 108 NAKWIYDNIPRGTLVNI 124 >ErfK_YbiS_YhnG_Q60BQ3_102-241_PF03734.4 Length = 140 Score = 75.2 bits (184), Expect = 1e-12 Identities = 25/146 (17%), Positives = 41/146 (28%), Gaps = 35/146 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +L + AK +I +YP+ G +P G+ +V Sbjct: 6 MVINLATMRLYHFPAKAAEG--VISTYPVGIGKEG---------RSTPTGYMTVVRKTEF 54 Query: 77 PDSRYY---------------LAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VS 112 P A++ G N Y + +IHG S Sbjct: 55 PTWYPTENIRRDHALKGDPLPPAVSPGPDNPLGDYAMYLSRPQYLIHGTNKPYSIGFRAS 114 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + I +F V+ Sbjct: 115 NGCIRLYPEDIAAVFPEVKPGAAVRI 140 >gi|69930975|ref|ZP_00627615.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 320 Score = 74.8 bits (183), Expect = 1e-12 Identities = 27/142 (19%), Positives = 44/142 (30%), Gaps = 35/142 (24%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q+P + + K+ + ++L+ G LI YP S + S G Sbjct: 161 QIPKKAAKVEVDKKRQTVKLFDKSNG----LIGFYPATVGSE---------EKPSLSGTL 207 Query: 69 SVQPNQLNPDSRYYLA-------------INIGFPNAYDRAH-GYTGKYLMIHGACV--- 111 V + NP Y A I G N +G+ +HG Sbjct: 208 KVTTVKRNPTYHYNPAYYFGGVHSRKPFTIAPGPNNPVGTVWISLSGEGYGVHGTSSPGK 267 Query: 112 -----SVGCYAMTDAQIDEIFA 128 S GC +T+ + + Sbjct: 268 VSKSESHGCIRLTNWDAERVAE 289 >gi|56676740|gb|AAV93406.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter pomeroyi DSS-3] Length = 208 Score = 74.8 bits (183), Expect = 1e-12 Identities = 25/142 (17%), Positives = 41/142 (28%), Gaps = 27/142 (19%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS--------PEG 66 I + R L W + + + +P R G ++ P Sbjct: 77 GAILVDTVSRALHYW----SEDQSVYRLFPSSV--PLTDELTRRG--RTSVIRKVVGPSW 128 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYA 117 + + NP+ Y I G N Y + KY IHG S GC Sbjct: 129 APTPSMKKRNPEWPDY--IPPGPDNPLGTHALYLSWKYYRIHGTHDTRKIGRRSSNGCIG 186 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 + + I ++F + Sbjct: 187 LYNEHISQLFDLTKVGTQVLLI 208 >gi|62317131|ref|YP_222984.1| hypothetical protein BruAb2_0179 [Brucella abortus biovar 1 str. 9-941] Length = 227 Score = 74.5 bits (182), Expect = 1e-12 Identities = 21/123 (17%), Positives = 34/123 (27%), Gaps = 17/123 (13%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK------ 55 + + + P I I R L L +A + Y + G K Sbjct: 98 LPQIVSYSGKEKPGTIVIDTASRFLYLVQADGKA-----RRYGVGVGKQGFSWKGTQRIS 152 Query: 56 -RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGA--CV 111 + E +P + + + I N Y G L IHG Sbjct: 153 RKAEWPTWTPPSEMIARERKKGRFLPARMDGGIN--NPLGARALYLGSTLYRIHGTNQPW 210 Query: 112 SVG 114 ++G Sbjct: 211 TIG 213 >ErfK_YbiS_YhnG_Q5LWA4_42-184_PF03734.4 Length = 143 Score = 74.5 bits (182), Expect = 2e-12 Identities = 21/146 (14%), Positives = 35/146 (23%), Gaps = 26/146 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFYSV 70 P + I L + Y G G + + P + Sbjct: 3 PGRLLILPRSFYLYYVTEEREAI-----RYGCGVGKAGLEFTGTATIDVKKEWPTWRPTP 57 Query: 71 QPNQLNPDSRYYL-----AINIGFPNAYDRAHGYT-----GKYLMIHGA--------CVS 112 + + +P + G N Y Y IHG S Sbjct: 58 EMIERDPRTYAKFVDNNYIQPGGPENPLGARALYLFQNGVDTYFRIHGTTQPQTIGHAAS 117 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC M + + +++ V V Sbjct: 118 NGCIRMLNEHVIDLYNRVPLGTVVTV 143 >ErfK_YbiS_YhnG_Q7V8E9_47-190_PF03734.4 Length = 144 Score = 74.1 bits (181), Expect = 2e-12 Identities = 23/150 (15%), Positives = 44/150 (29%), Gaps = 45/150 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + R+L + + + LIKS+ + G ++P G + V + Sbjct: 6 LVLDRRSRRLLVLE-----DGSLIKSFSVAVGMPGW---------ETPTGEFQVLSKTPH 51 Query: 77 PDSRYYLA---INIGFPNAYDRAH--------------GYTGKYL------MIHGAC--- 110 P + + I G N G + HG Sbjct: 52 PIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRW 111 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFV 135 VS GC + + I ++ V+ Sbjct: 112 TVGRAVSHGCVRLFEEDIQSLYRLVKIGTP 141 >ErfK_YbiS_YhnG_Q5LWL8_74-207_PF03734.4 Length = 134 Score = 74.1 bits (181), Expect = 2e-12 Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 27/139 (19%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS--------PEG 66 I + R L W + + + +P R G ++ P Sbjct: 4 GAILVDTVSRALHYW----SEDQSVYRLFPSSV--PLTDELTRRG--RTSVIRKVVGPSW 55 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYA 117 + + NP+ Y I G N Y + KY IHG S GC Sbjct: 56 APTPSMKKRNPEWPDY--IPPGPDNPLGTHALYLSWKYYRIHGTHDTRKIGRRSSNGCIG 113 Query: 118 MTDAQIDEIFAFVRDAFVG 136 + + I ++F + Sbjct: 114 LYNEHISQLFDLTKVGTQV 132 >gi|68174957|ref|ZP_00548215.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 274 Score = 73.7 bits (180), Expect = 2e-12 Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 31/138 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP--NQ 74 +++ + +L L++ LI + + D +P G Y + Sbjct: 154 LQVVRGAHQLRLYRGN-----TLISLFVVAVG---------TTDTPTPGGRYYLTELLRP 199 Query: 75 LNPDSRYYL-AINIGFPNAYDRAHGYTGKY---LMIHGAC--------VSVGCYAMTDAQ 122 NP Y A + + + + + +HG VS GC ++++ Sbjct: 200 RNPTGPYGPFAFGLSG---FSTSLASFEGHAPIIGLHGTDQPHTLGRDVSHGCIRLSNSD 256 Query: 123 IDEIFAFVRDAFVGGQPS 140 I + + + Sbjct: 257 ITWLAGMLPLGTPVDIVA 274 >ErfK_YbiS_YhnG_Q98P76_240-375_PF03734.4 Length = 136 Score = 73.3 bits (179), Expect = 3e-12 Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + K E ++ + + L+ ++P S + SP G ++V+ Sbjct: 1 GKAVRVEVDKAEGQVRAY----AEDGSLLAAFPATIGSE---------ENPSPSGMHTVR 47 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--------------LMIHGACV------ 111 NP Y +N N G IHG Sbjct: 48 AVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEPSFGIHGTPEPARIDK 107 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ + Sbjct: 108 TGSHGCVRLTNWDAGELGKLLSPGVPVQF 136 >gi|67676061|ref|ZP_00472813.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 173 Score = 72.9 bits (178), Expect = 4e-12 Identities = 29/169 (17%), Positives = 52/169 (30%), Gaps = 49/169 (28%) Query: 9 QLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 LP ++ I + L +W+A E ++ I + G+G ++EG Q+P G+ Sbjct: 9 DLPPRQGTWLEIDLGAQSLTVWEADERRE-----TFAISSGARGIG--QQEGSGQTPVGW 61 Query: 68 YSV------------QPNQLNPDSR-YYLAINIGFPNAYDRAHGYT-------------- 100 + V P + + +P D Sbjct: 62 HYVRAAIGDGLPRGSVFRGRRPTGEVFSPDLARQYP-ERDWILTRILWLCGLERGVNRGG 120 Query: 101 -----GKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVG 136 +Y+ +HG S GC + DA + +FA Sbjct: 121 DVDSQRRYIYLHGTPDDQPMGVPASHGCIRLRDAALLSVFAAAPPGTPV 169 >ErfK_YbiS_YhnG_Q92KF1_25-137_PF03734.4 Length = 113 Score = 72.9 bits (178), Expect = 4e-12 Identities = 16/131 (12%), Positives = 40/131 (30%), Gaps = 26/131 (19%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + ++++ L ++ ++ + + G +P G +S+ Sbjct: 3 PLQVVVSRDQQSLVVYDGD-----TVVATSKVSTGKAG---------HATPTGIFSILEK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEIF 127 + +S Y P + + T + +HG S GC + +F Sbjct: 49 RRRHESNIYS----NAPMPFMQRL--TWSGIALHGSNHVPDYPASHGCVRLPGKFAASLF 102 Query: 128 AFVRDAFVGGQ 138 Sbjct: 103 KMTGYGMHVVI 113 >gi|69299488|ref|ZP_00621475.1| Twin-arginine translocation pathway signal [Silicibacter sp. TM1040] Length = 205 Score = 72.9 bits (178), Expect = 4e-12 Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 27/143 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICK--------WSGGLGPKRREGDFQSPE 65 I + + R L W + + K +P ++ EG P Sbjct: 73 RGAILVDIDSRALHFW----SEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKVEG----PS 124 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCY 116 + + NP+ Y I G N Y + +Y IHG S GC Sbjct: 125 WAPTPNMRKRNPEWPAY--IPPGPDNPLGSHALYLSWQYYRIHGTHDTRKIGRKSSNGCI 182 Query: 117 AMTDAQIDEIFAFVRDAFVGGQP 139 + + I E++ R Sbjct: 183 GLYNEHIAELYKLTRSGTQVLLI 205 >ErfK_YbiS_YhnG_Q74GR2_117-256_PF03734.4 Length = 140 Score = 72.5 bits (177), Expect = 6e-12 Identities = 23/146 (15%), Positives = 38/146 (26%), Gaps = 35/146 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +L +K G + +YP+ + + +P+G V Sbjct: 6 IVINLATMRLFQFKENGGAL--AVSTYPVGIGTK---------ERPTPQGPTRVARKASR 54 Query: 77 PDSRYYLAI---------------NIGFPNAYDRAHGY-TGKYLMIHGAC--------VS 112 P +I G N Y + +IHG S Sbjct: 55 PTWYVPASIAEDHRKKGDILPARVPPGPENPLGDYALYLSRSGYLIHGTNKPASIGLKAS 114 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + I+ +F Sbjct: 115 NGCMRLYPEHIEVLFRDTAVNTPVLI 140 >gi|69937362|ref|ZP_00632028.1| Twin-arginine translocation pathway signal [Paracoccus denitrificans PD1222] Length = 217 Score = 72.5 bits (177), Expect = 6e-12 Identities = 20/134 (14%), Positives = 36/134 (26%), Gaps = 11/134 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I + R L W S P+ G P + + + Sbjct: 86 GAILVDLTSRALHFWSEDQSVYRLFPTSVPVSADLTRTGRTEIIKKVVGPSWAPTPEMKK 145 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 NP+ + G N + + +Y IHG S GC + + I + Sbjct: 146 RNPEWP--DFVPPGPDNPLGTHALWLSWQYYRIHGTHDTRKIGRKSSNGCIGLYNEHIQQ 203 Query: 126 IFAFVRDAFVGGQP 139 ++ + Sbjct: 204 LYELTKIGTQVLLI 217 >ErfK_YbiS_YhnG_Q5WH69_27-153_PF03734.4 Length = 127 Score = 72.1 bits (176), Expect = 7e-12 Identities = 20/136 (14%), Positives = 36/136 (26%), Gaps = 28/136 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + L L +A E P+ G ++P G ++V Sbjct: 6 VIVNVRTNTLALIEANHIAEIH-----PVATGKKG---------DETPLGQFTVLVKVEQ 51 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 P R N G G+ +HG S GC + + Sbjct: 52 PYYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPGSIGYSASAGCIRLANPT 111 Query: 123 IDEIFAFVRDAFVGGQ 138 I+ ++ + Sbjct: 112 IERLYQKIDIGSKIFI 127 >ErfK_YbiS_YhnG_Q7V696_87-217_PF03734.4 Length = 131 Score = 72.1 bits (176), Expect = 8e-12 Identities = 16/141 (11%), Positives = 40/141 (28%), Gaps = 32/141 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + R++ + + + + + +P+ +P G + V+ + Sbjct: 5 KVVLLLGRREISVIR-----DGEKLGPWPVAIGDPRT---------PTPTGVFKVENKVI 50 Query: 76 NPDSRYYLAINIGF--------PNAYDRAHGYTGKYLMIHGACV----------SVGCYA 117 NP + + + + + IHG + GC Sbjct: 51 NPQYQSTKSGRVNPAIGVASPLGDRWIGFLQSGQNQFGIHGTPWPYWVNAKAAVTNGCVR 110 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M A + ++F V Sbjct: 111 MLHAHVRQLFDVVEVGTTVEI 131 >gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus] Length = 189 Score = 71.4 bits (174), Expect = 1e-11 Identities = 27/140 (19%), Positives = 37/140 (26%), Gaps = 13/140 (9%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G P + R L W A+ G S PI G + P Sbjct: 54 DSLGKP-MLVADTFSRALHYWNAEGGDHRIFPTSVPISDDLTKRGYTEIVRKKEGPSWTP 112 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMT 119 + PD + I G N Y + +IHG S GC + Sbjct: 113 TPSQMARYPDWKP---IGPGPDNPLGTHAMYLSWPAYIIHGTHDTRKIGRRSSDGCIGLY 169 Query: 120 DAQIDEIFAFVRDAFVGGQP 139 + I E+F Sbjct: 170 NEMIAELFQLCPVGTRVRVI 189 >gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacterium efficiens YS-314] Length = 403 Score = 71.4 bits (174), Expect = 1e-11 Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + +E++ L+++ P+ ++ +P G Y + Sbjct: 240 GDRVEAVVDDNTKTMEVYHN-----GTLLRTIPVSLGRD-------TDEWATPNGIYIIG 287 Query: 72 PNQLNPDSRYYLA-INIGFPN-----AYDRAHGYTGKYLMIHGACVS----------VGC 115 NP +G+ D A + + +H A S GC Sbjct: 288 D--RNPSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVSHGC 345 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSV 141 +T V+ + + Sbjct: 346 INVTTEAAQWFQNTVKRGDIVTVKNT 371 >gi|53688090|ref|ZP_00109223.2| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 171 Score = 71.0 bits (173), Expect = 2e-11 Identities = 16/134 (11%), Positives = 33/134 (24%), Gaps = 27/134 (20%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +I+I +++L W+ +++ I + G + VQ Sbjct: 55 DRRWIQIDLSKQRLIAWEGD-----RVVYGSAISSGKKAT---------PTLVGTFKVQS 100 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQID 124 + + + IHG VS GC + Sbjct: 101 KFKTTRMQ-----GENYNVPNVPYAMFYEGNYAIHGAYWHKRFGTPVSHGCVNIAPKHAK 155 Query: 125 EIFAFVRDAFVGGQ 138 +F + Sbjct: 156 WLFQWASVGTPIVI 169 >gi|71837791|ref|ZP_00677554.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 292 Score = 71.0 bits (173), Expect = 2e-11 Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 30/137 (21%) Query: 1 PVSKELKQQLPGSPVY---IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 P+ K Q + Y I + E+ L ++ +L+ S P G Sbjct: 115 PMPK----QYEPARRYDKYILVDLTEQWLGAYEN-----GRLVFSTPAATGKAG------ 159 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAIN--IGFP--NAYDRAHGYTGKYLMIH-----G 108 ++P G + + L S Y N +P NA G G +H G Sbjct: 160 ---NETPTGLFRITARHLTHTSSLYKTANDEEQYPMDNAMRFHVGPDGVSYWLHARDLPG 216 Query: 109 ACVSVGCYAMTDAQIDE 125 S GC + D ++ + Sbjct: 217 RPASHGCIGLYDEEMQK 233 >ErfK_YbiS_YhnG_Q7NWP8_32-170_PF03734.4 Length = 139 Score = 70.6 bits (172), Expect = 2e-11 Identities = 18/148 (12%), Positives = 37/148 (25%), Gaps = 40/148 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + +L L++ + +L + +P+ Q+P G + + Sbjct: 6 LVLNLPQARLFLYQ-----DGKLARIFPVAVGKMLT---------QTPTGSFDITGIYRA 51 Query: 77 PDSRYYLAI------------------NIGFPNAYDRAHGYTGKYLMIHGACV------- 111 P +I G + L HG Sbjct: 52 PSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRFGESSLGLGFHGTNAPGSVPGF 111 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + E+ V Sbjct: 112 RSHGCVRLRNDDALELARTVSRGDAVTV 139 >gi|46192269|ref|ZP_00007047.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 180 Score = 70.6 bits (172), Expect = 2e-11 Identities = 21/138 (15%), Positives = 43/138 (31%), Gaps = 19/138 (13%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICK----WSGGLGPKRREGDFQSPEGFYSV 70 + +R + W + + + YP LG R + P + Sbjct: 49 GAVLADLRQRVVLFW----SEDGTVHRRYPAAMPDTRAFPRLGGTRIIRKVEGPTWRPTP 104 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYT-GKYLMIHGA--CVS------VGCYAMTDA 121 +P+ + ++ G N + + ++ IHG + GC +++A Sbjct: 105 AMRARDPELPW--SLPPGPGNPFGTHALHLEWQHYRIHGTHDPSTIGGVTAHGCIGLSNA 162 Query: 122 QIDEIFAFVRDAFVGGQP 139 I E+FA Sbjct: 163 HIAELFAHTTVGTQVRLV 180 >ErfK_YbiS_YhnG_Q8PB12_56-167_PF03734.4 Length = 112 Score = 70.2 bits (171), Expect = 3e-11 Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 15/123 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + E++ ++ + LI I G ++P G +++ Sbjct: 3 PMAVIVSLTEQRAYAYRNGI-----LIGVSTISSGKPG---------HETPTGVFTILQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 + S Y A + + + G S GC + +F Sbjct: 49 DKDHRSSIYNAAPMPYQQRLTWDGVALHAG-GLPGYPESHGCVHLPSEFARLLFDNSNMG 107 Query: 134 FVG 136 V Sbjct: 108 MVV 110 >gi|68552645|ref|ZP_00592032.1| ErfK/YbiS/YcfS/YnhG [Prosthecochloris aestuarii DSM 271] Length = 174 Score = 70.2 bits (171), Expect = 3e-11 Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 25/147 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 P+ + + P I ++ ER++ ++ A + P+ Sbjct: 43 PIDIQKALEYVPIPKQISDYRGEREIRVFLALQYFGAYENGAIAFWGPVSSGKK------ 96 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 + G + V Q Y + I + NA IH G Sbjct: 97 ---SRPTRPGKFVVNYKQR-----YKRS--IKYHNAPMPYAINYNGGYFIHEQSLPGYPA 146 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + ++F +++ Sbjct: 147 SHGCIRLLMSDAKKLFYWIKIGDPVTI 173 >gi|68232378|ref|ZP_00571527.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 132 Score = 70.2 bits (171), Expect = 3e-11 Identities = 16/138 (11%), Positives = 43/138 (31%), Gaps = 25/138 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P + + + E +L +++ ++ P+ + + +P G + + Sbjct: 9 PFELLVDRSEHQLTIFRDN-----TVVAKLPVGIGTEAI---------PTPTGTFYLTEL 54 Query: 74 QL--NPDSRYYL-AINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 +P+ + A + + + +HG VS+GC + +A Sbjct: 55 LRPGDPNGPWGPFAFGLSGFSDVITQFNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNAD 114 Query: 123 IDEIFAFVRDAFVGGQPS 140 + + V Sbjct: 115 LLRLVDVVPLGTPITIVG 132 >gi|75908663|ref|YP_322959.1| ErfK/YbiS/YcfS/YnhG [Anabaena variabilis ATCC 29413] Length = 170 Score = 70.2 bits (171), Expect = 3e-11 Identities = 20/136 (14%), Positives = 34/136 (25%), Gaps = 31/136 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE--GFYSV 70 +I+I ++L W+ Y I S G +P G + + Sbjct: 54 DQRWIQINLANQRLTAWEGGKP-------VYAIVISS---------GKRSTPTRIGSFKI 97 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQ 122 Q + R + + IHG VS GC + Sbjct: 98 QSKHKSTRMR-----GRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNH 152 Query: 123 IDEIFAFVRDAFVGGQ 138 +F + Sbjct: 153 AKWLFNWASLGTPVVI 168 >gi|71676969|ref|ZP_00674708.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 206 Score = 70.2 bits (171), Expect = 3e-11 Identities = 20/133 (15%), Positives = 36/133 (27%), Gaps = 27/133 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I I ++L W+ Y +I + + G + +Q Sbjct: 93 WISIDLSTQRLIAWEGNE-AVYAVI----VSTGKAST---------PTRLGTFQIQTKY- 137 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEIF 127 P +R G+ Y + IHG VS GC + +F Sbjct: 138 -PTTRMT---GPGYDVPDVPYTMYYDAGMAIHGAYWHNMFGTPVSHGCTNVAVNHAKWLF 193 Query: 128 AFVRDAFVGGQPS 140 + + Sbjct: 194 DWASVGTPVIVHN 206 >ErfK_YbiS_YhnG_Q5LRC4_82-215_PF03734.4 Length = 134 Score = 70.2 bits (171), Expect = 3e-11 Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 19/135 (14%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICK--WSGGLGPKRREGDFQS--PEGFYSVQP 72 + R + W A K YP E ++ P + Sbjct: 6 LLADISSRAVHYWGADGS-----YKLYPSSVPMTEELTRRGYTEVVRKTVNPSWTPTASM 60 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDAQI 123 + +P + N Y T ++HG S GC + + + Sbjct: 61 RERDPTLPVRMEGGE-VGNPLGTRAMYLTWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHV 119 Query: 124 DEIFAFVRDAFVGGQ 138 +E++ V+ Sbjct: 120 EELYELVQVGTQVRL 134 >gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 216 Score = 70.2 bits (171), Expect = 3e-11 Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 19/135 (14%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICK--WSGGLGPKRREGDFQS--PEGFYSVQP 72 + R + W A K YP E ++ P + Sbjct: 87 LLADISSRAVHYWGADGS-----YKLYPSSVPMTEELTRRGYTEVVRKTVNPSWTPTASM 141 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDAQI 123 + +P + N Y T ++HG S GC + + + Sbjct: 142 RERDPTLPVRMEGGE-VGNPLGTRAMYLTWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHV 200 Query: 124 DEIFAFVRDAFVGGQ 138 +E++ V+ Sbjct: 201 EELYELVQVGTQVRL 215 >gi|46400440|emb|CAF23889.1| hypothetical protein [Parachlamydia sp. UWE25] Length = 325 Score = 69.8 bits (170), Expect = 4e-11 Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 40/165 (24%) Query: 16 YIRIFKEERKLE-LWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 Y+ + K+ + A + LIK+YP+ +P G YS+ Sbjct: 159 YLIVDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRL---DSSSSSGLLTPLGKYSLGDRI 215 Query: 74 ---QLNPDSRY---YLAINIGFPNAYDRAHGYTGK------YLMIHGACV---------- 111 + Y + F + G IHG Sbjct: 216 ATYKPKSMGIYQGKKTEMITVFGTRWIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQ 275 Query: 112 --------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 S GC +T ++E+F+ + +P+ + F Sbjct: 276 IDSVGKYQSDGCIRLTTPDMEELFSII-----VTKPTTIEIVRDF 315 >gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodopseudomonas palustris CGA009] Length = 519 Score = 69.8 bits (170), Expect = 4e-11 Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 15/134 (11%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ L+ ++ I P+ + G ++P G ++V Sbjct: 54 AGEPIMAIVSIKGQRVTLYDSEGW-----IYRAPVSTGTTG---------RETPAGVFAV 99 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + S Y + + G S GC M +++F Sbjct: 100 VEKDKDHRSTMYDDAWMPNMQRITWNGVALHGGP-LPGYPASHGCVRMPYEFAEKLFDKT 158 Query: 131 RDAFVGGQPSVQVS 144 R V Sbjct: 159 RIGMRVIVSPEDVE 172 >gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 162 Score = 69.8 bits (170), Expect = 4e-11 Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 25/140 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ++R L + K ++K++ + G+G K++ GD ++P G Y + + + Sbjct: 31 INVLTKKRILNICKN-----GTVVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCYAM-TDA 121 +++ + I I +P A GY+G+ + IHG + GC A+ + Sbjct: 85 --NQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKNN 142 Query: 122 QIDEIFAFVR--DAFVGGQP 139 I+ + +V+ Sbjct: 143 YIEYVANWVKANPGAKVLII 162 >gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens] Length = 162 Score = 69.5 bits (169), Expect = 5e-11 Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 25/140 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ++R L + K ++K++ + G+G K++ GD ++P G Y + + + Sbjct: 31 INVLTKKRILNICKN-----GTVVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCYAM-TDA 121 +++ + I I +P A GYTG+ + IHG + GC A+ + Sbjct: 85 --NQFKVFIPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKNN 142 Query: 122 QIDEIFAFVR--DAFVGGQP 139 I+ + +V+ Sbjct: 143 YIEYVANWVKANPGAKVLII 162 >gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clostridium tetani E88] Length = 510 Score = 69.1 bits (168), Expect = 6e-11 Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 23/137 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P + I + +K+ +++ +LIKS+ G + +G + + Sbjct: 387 PNNTYSILVSLANQKVYIYENN-----RLIKSFICSTGMRGT---------PTIKGRFLI 432 Query: 71 QPNQ----LNPDSRYYLAINIGFPNAYDRAHGYTGKYL-----MIHGACVSVGCYAMTDA 121 Y I + + + G S GC + D Sbjct: 433 GGRGASFGQEHGYICYNFIRFNYDYLFHSVLHNLDGSIIQSEYNKLGTQASHGCVRLKDE 492 Query: 122 QIDEIFAFVRDAFVGGQ 138 I ++ + + Sbjct: 493 DIKWMYNNIPRNTLVVI 509 >gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 351 Score = 68.7 bits (167), Expect = 8e-11 Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 15/123 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + E++ ++ + LI I G ++P G +++ Sbjct: 58 PMAVIVSLTEQRAYAYRNGI-----LIGVSTISSGKPG---------HETPTGVFTILQK 103 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 + S Y A + + + G S GC + +F Sbjct: 104 DKDHRSSIYNAAPMPYQQRLTWDGVALHAG-GLPGYPESHGCVHLPSEFARLLFDNSNMG 162 Query: 134 FVG 136 V Sbjct: 163 MVV 165 >gi|17133907|dbj|BAB76469.1| all4770 [Nostoc sp. PCC 7120] Length = 170 Score = 68.3 bits (166), Expect = 1e-10 Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 31/133 (23%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE--GFYSVQPN 73 +I+I ++L W+ Y I S G +P G + +Q Sbjct: 57 WIQINLANQRLIAWEGGKP-------VYAIVISS---------GKRSTPTRIGSFKIQSK 100 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDE 125 + R + + IHG VS GC + Sbjct: 101 HKSTRMR-----GRNYDVPNVPYAMFYSGNYGIHGAYWHRKFGTPVSNGCVNLAPNHAQW 155 Query: 126 IFAFVRDAFVGGQ 138 +F + Sbjct: 156 LFNWASLGTPVVI 168 >ErfK_YbiS_YhnG_YAT5_56-188_PF03734.4 Length = 133 Score = 68.3 bits (166), Expect = 1e-10 Identities = 27/136 (19%), Positives = 37/136 (27%), Gaps = 13/136 (9%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P + R L W A+ G S PI G + P + Sbjct: 2 GKP-MLVADTFSRALHYWNAEGGDHRIFPTSVPISDDLTKRGYTEIVRKKEGPSWTPTPS 60 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDAQ 122 PD + I G N Y + +IHG S GC + + Sbjct: 61 QMARYPDWKP---IGPGPDNPLGTHAMYLSWPAYIIHGTHDTRKIGRRSSDGCIGLYNEM 117 Query: 123 IDEIFAFVRDAFVGGQ 138 I E+F Sbjct: 118 IAELFQLCPVGTRVRV 133 >gi|69297918|ref|ZP_00620214.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 205 Score = 68.3 bits (166), Expect = 1e-10 Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 18/135 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFYSVQP 72 + E R L W GG+ + +P G + ++P + Sbjct: 75 LLADIESRALHYW----GGDGETYLLFPSSVPMSEELTRRGYSKIVRKRENPSWTPTANM 130 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDAQI 123 + +P + N Y ++HG S GC + + + Sbjct: 131 RERDPSLPQRIEGGEPN-NPLGTRALYLDWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHV 189 Query: 124 DEIFAFVRDAFVGGQ 138 ++++ V+ Sbjct: 190 EKLYPLVKVGTQVRL 204 >gi|67934945|ref|ZP_00527970.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides DSM 266] Length = 284 Score = 67.5 bits (164), Expect = 2e-10 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 25/148 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 PV +E ++ P + + ER++ ++ + + L+ + Sbjct: 149 PVEREKAEKYVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAVSTGK------- 201 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 +P G + V Q S I + NA +H G Sbjct: 202 --RTNATPPGKFVVNYKQRFKKS-------IKYDNAPMPYSINYNGGYFMHQQSLPGYPA 252 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC + + + +F + + Sbjct: 253 SHGCVRLLMSDAERLFTWAKLKDPVTVV 280 >gi|46191772|ref|ZP_00008016.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 176 Score = 67.5 bits (164), Expect = 2e-10 Identities = 20/134 (14%), Positives = 34/134 (25%), Gaps = 10/134 (7%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + R L W S P+ G +P + + Sbjct: 44 GAVLVDITSRALHFWSEDGQTYLLFPTSVPLSDDLTRRGRTEVVQKVVAPPWRPTPAMKE 103 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 NP+ + N Y + Y IHG S GC + + I + Sbjct: 104 RNPEWP-DMVPGGAPDNPLGTHALYLSWTYYRIHGTHDTRKIGRKSSNGCIGLYNEHIQQ 162 Query: 126 IFAFVRDAFVGGQP 139 +F + Sbjct: 163 LFPLAKVGTQVLLI 176 >gi|69929707|ref|ZP_00626584.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 520 Score = 67.5 bits (164), Expect = 2e-10 Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 32/161 (19%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ + A+ I P+ K RE +P G +++ Sbjct: 57 AGEPIMAIVSLKSQQVTFYDAEGW-----ILRAPVSTG-----IKERE----TPAGVFAI 102 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-----VSVGCYAMTDAQIDE 125 + S Y + L +HG S GC M ++ Sbjct: 103 IEKDKDHHSTMYDDAWMPNMQRITW------NGLALHGGPLPGYAASHGCVRMPYGFAEK 156 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDF 166 +F R I P + S Sbjct: 157 LFDKTRIGMRV-------IISPNDAAPVDFSHPTLSLFAPN 190 >ErfK_YbiS_YhnG_Q899Q5_388-509_PF03734.4 Length = 122 Score = 67.5 bits (164), Expect = 2e-10 Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 23/136 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I + +K+ +++ +LIKS+ G + +G + + Sbjct: 1 NNTYSILVSLANQKVYIYENN-----RLIKSFICSTGMRGT---------PTIKGRFLIG 46 Query: 72 PNQ----LNPDSRYYLAINIGFPNAYDRAHGYTGKYL-----MIHGACVSVGCYAMTDAQ 122 Y I + + + G S GC + D Sbjct: 47 GRGASFGQEHGYICYNFIRFNYDYLFHSVLHNLDGSIIQSEYNKLGTQASHGCVRLKDED 106 Query: 123 IDEIFAFVRDAFVGGQ 138 I ++ + + Sbjct: 107 IKWMYNNIPRNTLVVI 122 >ErfK_YbiS_YhnG_Q6MC10_156-311_PF03734.4 Length = 156 Score = 66.8 bits (162), Expect = 3e-10 Identities = 24/147 (16%), Positives = 42/147 (28%), Gaps = 35/147 (23%) Query: 16 YIRIFKEERKLE-LWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 Y+ + K+ + A + LIK+YP+ +P G YS+ Sbjct: 4 YLIVDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRL---DSSSSSGLLTPLGKYSLGDRI 60 Query: 74 ---QLNPDSRY---YLAINIGFPNAYDRAHGYTGK------YLMIHGACV---------- 111 + Y + F + G IHG Sbjct: 61 ATYKPKSMGIYQGKKTEMITVFGTRWIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQ 120 Query: 112 --------SVGCYAMTDAQIDEIFAFV 130 S GC +T ++E+F+ + Sbjct: 121 IDSVGKYQSDGCIRLTTPDMEELFSII 147 >gi|76164940|gb|EAO59080.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aurantiacus J-10-fl] Length = 372 Score = 66.0 bits (160), Expect = 5e-10 Identities = 24/157 (15%), Positives = 45/157 (28%), Gaps = 42/157 (26%) Query: 9 QLPGSPVY--------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 +LPG+ + I + + L ++ + L+ S P+ G Sbjct: 239 RLPGAVDWSPGLWSRRIEVDLARQYLFAYEDNL-----LVFSAPVATGRDGFN------- 286 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGF-PNAYDRAHGYTGKYLMIHGACV-------- 111 +P G +++ L + PN Y + +HG Sbjct: 287 --TPRGDFTIYYRLPQQTMSGCLGGECWYVPNV--PWVQYVVGGVALHGTYWHNAHGSGV 342 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 S GC + ++ + V V IY Sbjct: 343 RMSHGCINLRIDDAQWLYEWADLG-------VPVKIY 372 >ErfK_YbiS_YhnG_Q6N3B5_55-166_PF03734.4 Length = 112 Score = 66.0 bits (160), Expect = 5e-10 Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 15/125 (12%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P+ + + +++ L+ ++ I P+ + G ++P G ++V Sbjct: 1 GEPIMAIVSIKGQRVTLYDSEGW-----IYRAPVSTGTTG---------RETPAGVFAVV 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 + S Y + + G S GC M +++F R Sbjct: 47 EKDKDHRSTMYDDAWMPNMQRITWNGVALHGGP-LPGYPASHGCVRMPYEFAEKLFDKTR 105 Query: 132 DAFVG 136 Sbjct: 106 IGMRV 110 >gi|69937273|ref|ZP_00631965.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 164 Score = 65.6 bits (159), Expect = 6e-10 Identities = 23/138 (16%), Positives = 36/138 (26%), Gaps = 19/138 (13%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYP----ICKWSGGLGPKRREGDFQSPEGFYSV 70 I + R L W G+ + + YP I G + P + Sbjct: 33 GAIVADTKSRALHFW----SGDEAIYRVYPTLVPISDALTKRGHTEIVRKKEGPGWTSTA 88 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDA 121 + PD + N Y +IHG S C + + Sbjct: 89 SQMERFPDWK--PVAGGDPANPLGSHAMYLPWPASLIHGTHDTRKIGRLPSDSCIGLCNE 146 Query: 122 QIDEIFAFVRDAFVGGQP 139 +I E+FA Sbjct: 147 KIAELFALCPVGTQVRII 164 >gi|16331947|ref|NP_442675.1| hypothetical protein sll0670 [Synechocystis sp. PCC 6803] Length = 169 Score = 65.6 bits (159), Expect = 8e-10 Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 27/131 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + ++L W+ Y +I I G + G +++Q + Sbjct: 56 WIEVNLSTQRLIAWEGNK-PVYAII----ISTGKKGT---------PTIPGIFTIQSKRS 101 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEIF 127 R + Y IHG VS GC + +F Sbjct: 102 IDRMR-----GADYDIDDVPYAQYYSGGYAIHGAYWHNKFGTPVSHGCINLAVDHAKWLF 156 Query: 128 AFVRDAFVGGQ 138 + + Sbjct: 157 NWSEISTPLVI 167 >ErfK_YbiS_YhnG_Q8FMX7_240-368_PF03734.4 Length = 129 Score = 65.2 bits (158), Expect = 1e-09 Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 30/143 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + +E++ L+++ P+ ++ +P G Y + Sbjct: 1 GDRVEAVVDDNTKTMEVYHN-----GTLLRTIPVSLGRD-------TDEWATPNGIYIIG 48 Query: 72 PNQLNPDSRYYLA-INIGFPN-----AYDRAHGYTGKYLMIHGACVS----------VGC 115 NP +G+ D A + + +H A S GC Sbjct: 49 D--RNPSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVSHGC 106 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 +T V+ + Sbjct: 107 INVTTEAAQWFQNTVKRGDIVTV 129 >gi|27377359|ref|NP_768888.1| hypothetical protein blr2248 [Bradyrhizobium japonicum USDA 110] Length = 520 Score = 65.2 bits (158), Expect = 1e-09 Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 32/154 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ + A I P+ + G ++P G +++ Sbjct: 55 AGEPIMAIVSIKSQQVTFYDADGW-----ILRAPVSTGTTG---------RETPAGVFAI 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-----VSVGCYAMTDAQIDE 125 + S Y + + +HG S GC M + Sbjct: 101 VEKDKDHHSTMYDDAWMPNMQRITW------NGIALHGGPLPGYAASHGCVRMPFGFAEG 154 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 +F I P + Sbjct: 155 LFDKTNIGMRV-------IISPNDAAPVDFNHPS 181 >ErfK_YbiS_YhnG_Q89T02_56-167_PF03734.4 Length = 112 Score = 64.4 bits (156), Expect = 1e-09 Identities = 17/132 (12%), Positives = 37/132 (28%), Gaps = 25/132 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P+ + + +++ + A I P+ + G ++P G +++ Sbjct: 1 GEPIMAIVSIKSQQVTFYDADGW-----ILRAPVSTGTTG---------RETPAGVFAIV 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-----VSVGCYAMTDAQIDEI 126 + S Y + + +HG S GC M + + Sbjct: 47 EKDKDHHSTMYDDAWMPNMQRITW------NGIALHGGPLPGYAASHGCVRMPFGFAEGL 100 Query: 127 FAFVRDAFVGGQ 138 F Sbjct: 101 FDKTNIGMRVII 112 >gi|71838162|ref|ZP_00677923.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 192 Score = 64.4 bits (156), Expect = 2e-09 Identities = 31/160 (19%), Positives = 47/160 (29%), Gaps = 22/160 (13%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL-----GPKR 56 S++ P +P I I L L++ G+ + Y + GL GP R Sbjct: 32 TSQDPAASRPAAPYIIEISISRTLLTLYERHGTGKMFPVAQYRVGSAMRGLTTYPLGPGR 91 Query: 57 REGDFQSPEGFYSVQPNQ--LNPDSRYYLAINIGFP-NAYDRA------HGYTGKYLMIH 107 P + Q A+ G P N + G IH Sbjct: 92 VTAIQFDPWWHPTAYSRQVFRERGISLPRAVPPGHPLNYMGPFKISLSHRTWKGAIYRIH 151 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 G V+ GC+ M + E+ +R V Sbjct: 152 GNNNPRRVGRRVTGGCFVMHNRDGLELARRIRVGTVVNIV 191 >ErfK_YbiS_YhnG_Q8YN03_53-168_PF03734.4 Length = 116 Score = 63.7 bits (154), Expect = 2e-09 Identities = 17/133 (12%), Positives = 31/133 (23%), Gaps = 31/133 (23%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE--GFYSVQPN 73 +I+I ++L W+ G +P G + +Q Sbjct: 5 WIQINLANQRLIAWEG----------------GKPVYAIVISSGKRSTPTRIGSFKIQSK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDE 125 + R + + IHG VS GC + Sbjct: 49 HKSTRMR-----GRNYDVPNVPYAMFYSGNYGIHGAYWHRKFGTPVSNGCVNLAPNHAQW 103 Query: 126 IFAFVRDAFVGGQ 138 +F + Sbjct: 104 LFNWASLGTPVVI 116 >ErfK_YbiS_YhnG_Q55969_52-167_PF03734.4 Length = 116 Score = 63.7 bits (154), Expect = 3e-09 Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 27/131 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + ++L W+ Y +I I G + G +++Q + Sbjct: 5 WIEVNLSTQRLIAWEGNK-PVYAII----ISTGKKGT---------PTIPGIFTIQSKRS 50 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEIF 127 R + Y IHG VS GC + +F Sbjct: 51 IDRMR-----GADYDIDDVPYAQYYSGGYAIHGAYWHNKFGTPVSHGCINLAVDHAKWLF 105 Query: 128 AFVRDAFVGGQ 138 + + Sbjct: 106 NWSEISTPLVI 116 >gi|52857863|ref|ZP_00341701.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Lactobacillus gasseri] Length = 410 Score = 62.9 bits (152), Expect = 4e-09 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 35/147 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ- 71 ++IR+ +E + + K PI G + +P G Y +Q Sbjct: 279 KDLWIRVSLKENRTYIMSGKK----------PIYT-MLSTGGVYHKNKSDTPTGTYHIQH 327 Query: 72 -------PNQLNPDSRYYLA-----------INIGFPNAYDRAHGYTGKYLMIHGACVSV 113 ++LN ++YY++ + + D+ + S Sbjct: 328 ERGAAFYNHKLNEGAKYYVSWKDHGVYLFHSVPTKSDGSIDKKEAKKLGKI-----PGSH 382 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC ++ + A V + Sbjct: 383 GCIRLSIPDSKWLAATVPAGTKVVIKN 409 >gi|29654687|ref|NP_820379.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 493] Length = 175 Score = 62.1 bits (150), Expect = 8e-09 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 17/133 (12%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + ++ +LIK + G PK + ++P G + + Sbjct: 51 LFVFDPKRHRWYAYQN-----GRLIKQGRASGGAYG-CPKNKSRSCRTPSGTFRIIRKGP 104 Query: 76 -NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEI-F 127 N S Y + G A + IHG+ S GC +T A + Sbjct: 105 PNCKSTRYPKPHGG---ARMDYCMCYHAFYCIHGSDHVPNYHASHGCIRVTPADARWLSH 161 Query: 128 AFVRDAFVGGQPS 140 F++ S Sbjct: 162 NFIQYGTKVVVKS 174 >gi|23464689|ref|NP_695292.1| protein similar to YcbI of B. subtilis [Bifidobacterium longum NCC2705] Length = 180 Score = 61.4 bits (148), Expect = 1e-08 Identities = 20/149 (13%), Positives = 42/149 (28%), Gaps = 27/149 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K+ S + +++ ++++ + ++ Y +I Sbjct: 47 PTGKQPDL-SQYSDLSVKVSIAKQEVYV-QSGGETIYTMIA----STGLNDT-------- 92 Query: 61 FQSPEGFYSVQPNQ---LNPDSRYYLAINIGFPNAYDRAHGYTG---KYLM-----IHGA 109 +P G Y + NP + F + TG M G Sbjct: 93 --TPRGNYVIGMRGDHFYNPAEGMGADYWVRFNGPFLFHSVPTGANSGEYMEEEGNKLGQ 150 Query: 110 CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T A + + + + Sbjct: 151 PASHGCVRLTVADAEWFYNQIPEGTPVTI 179 >gi|46190626|ref|ZP_00206527.1| COG1376: Uncharacterized protein conserved in bacteria [Bifidobacterium longum DJO10A] Length = 235 Score = 61.4 bits (148), Expect = 1e-08 Identities = 21/160 (13%), Positives = 44/160 (27%), Gaps = 49/160 (30%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K+ S + + + ++++ + K+ Y +I S + D Sbjct: 102 PTGKQPDL-SQYSDLSVEVSLAKQRVYV-KSGGQTIYTMIASTGV--------------D 145 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLA---INIGFPNAYDRAHGYTGKYLMIH---------- 107 +P G Y++ + +Y A + + + H Sbjct: 146 DATPHGSYTIDTRGEH----FYNAEEGMGADY-------WVQFYGSYLFHSVPTGEAFGD 194 Query: 108 ---------GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G S GC + A + V D + Sbjct: 195 YLPEEGAKLGQPASHGCVRLAVADAQWFYDQVPDGTLVTI 234 >gi|67929395|ref|ZP_00522577.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 238 Score = 61.0 bits (147), Expect = 2e-08 Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 27/135 (20%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ +E+ + + I + + +L++ P+ + Sbjct: 76 PMPREVPELSDRNKALI-VDLAAQVF-----GAYESGRLVRWGPVSTG---------DRR 120 Query: 61 FQSPEGFYSVQPNQL------NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 Q+P G Y + + NP N + G S G Sbjct: 121 HQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLGLHQ------YALPGRPASHG 174 Query: 115 CYAMTDAQIDEIFAF 129 C + IF + Sbjct: 175 CTRLLATDAQWIFNW 189 >gi|41326655|emb|CAF21137.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family [Corynebacterium glutamicum ATCC 13032] Length = 403 Score = 61.0 bits (147), Expect = 2e-08 Identities = 18/142 (12%), Positives = 41/142 (28%), Gaps = 34/142 (23%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + + ++K +L+++ P+ ++ +P G Y + N Sbjct: 246 VADDATKTMSVYKN-----GELLRTMPVSFGRD-------TSEWATPNGTYIIGD--RNE 291 Query: 78 DSRYYLA-INIGF-------PNAYDRAHGYTGKYLMIHGACVS----------VGCYAMT 119 +G+ P Y Y+G + +H A S GC ++ Sbjct: 292 SMIMDSTTFGLGYEEGGYRTPVKYATQMSYSG--IYVHAAPWSVGAQGSYNTSHGCINVS 349 Query: 120 DAQIDEIFAFVRDAFVGGQPSV 141 V+ + + Sbjct: 350 TENAQWFQEAVKRGDIVTVKNT 371 >gi|68195822|gb|EAN10258.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium DO] Length = 466 Score = 61.0 bits (147), Expect = 2e-08 Identities = 16/134 (11%), Positives = 36/134 (26%), Gaps = 27/134 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 YI + E + + +K + ++ I +P G + V + Sbjct: 344 YIEVDLENQHMWYYK-----DGKVALETDIVSGKPTT---------PTPAGVFYVWNKEE 389 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 + + + + + + IH + S GC + Sbjct: 390 DATLKGTNDDGTPYESPVNYWMPIDWTGVGIHDSDWQPEYGGDLWKTRGSHGCINTPPSV 449 Query: 123 IDEIFAFVRDAFVG 136 + E+F V Sbjct: 450 MKELFGMVEKGTPV 463 >gi|27383268|ref|NP_774797.1| hypothetical protein bll8157 [Bradyrhizobium japonicum USDA 110] Length = 147 Score = 60.6 bits (146), Expect = 2e-08 Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 32/141 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + I K +++ + + S+P+ G G +P + Q Sbjct: 29 ADLRVDIDKSSQRMSV-----RVDGAPRYSWPVSTGCSGYG---------TPSDTFHPQA 74 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 SR Y N+ + IHG S GC + A Sbjct: 75 MMRRYFSRRYY-------NSPMPHAIFFHYGFAIHGTTDIYRLGGPASHGCVRLHPAHAA 127 Query: 125 EIFAFVRDAFVGGQPSVQVSI 145 +FA V+ G + + I Sbjct: 128 ALFALVQ---REGARNTTIRI 145 >gi|28377421|ref|NP_784313.1| hypothetical protein lp_0536 [Lactobacillus plantarum WCFS1] Length = 464 Score = 60.6 bits (146), Expect = 2e-08 Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 26/134 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + KE + + ++ + +L S I G + G + + + Sbjct: 341 YVEVDKENQHMYVY-----VDGKLTVSTDIVTGKPGK--------HATTTGVWYIWNKEK 387 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N + + + IH + S GC + Sbjct: 388 NATLKGDNDDGSSYSQPVSYWMPFDDTGEGIHDSSWQTQYGGTWYKKHGSHGCVNTPPSV 447 Query: 123 IDEIFAFVRDAFVG 136 + ++FA V Sbjct: 448 MKKVFAAVPVGTPV 461 >gi|23465720|ref|NP_696323.1| hypothetical protein BL1154 [Bifidobacterium longum NCC2705] Length = 557 Score = 60.6 bits (146), Expect = 2e-08 Identities = 16/142 (11%), Positives = 33/142 (23%), Gaps = 31/142 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++ + + ++ ++K + I +G S G + V Sbjct: 407 WVHVDLTNQTATAYQG-----TTVVKKFNIASGKP-----TADGSMLSDTGTFYVYLKYE 456 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------------SVGCYAMT 119 + + G+ Y +HG S GC M Sbjct: 457 SQTM-----VGEGYNQPGTPWVSYYNGGEALHGVPAYMWGEHPIYVQQGIPGSHGCINMQ 511 Query: 120 DAQIDEIFAFVRDAFVGGQPSV 141 A ++ F Sbjct: 512 VADAKWMYDFATIGTRVVVDGT 533 >gi|48849271|ref|ZP_00303515.1| COG1376: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 216 Score = 60.2 bits (145), Expect = 3e-08 Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 28/136 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMG-GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 P+ + + R + +++A G ++K Y GD +P G + Sbjct: 86 AEGPLVVTVDLTARVISVFRAGHEIGAAAILKGY---------------GDKPTPTGIFP 130 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-----SVGCYAMTDAQID 124 + + S Y A P Y G + IHG+ V + GC + DA Sbjct: 131 ITEKDADHVSNIYDA-----PMPYMMRLTNDG--VSIHGSKVEKGYATNGCIGVPDAFAA 183 Query: 125 EIFAFVRDAFVGGQPS 140 ++F + Sbjct: 184 KLFKLAKLGDKVIITD 199 >gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 313 Score = 59.8 bits (144), Expect = 4e-08 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 13/120 (10%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 K L+L++ K Q I + P + G G K++EGD +P G Y + L Sbjct: 52 LFVSNKSTPSLQLYQLKDSK-LQEIGNSP-ALVAKGKGNKKKEGDLTTPIGSYDLNAR-L 108 Query: 76 NPDSRYY--LAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 +YY LA + +PN YD++ TG + IHG + GC A+ + + + Sbjct: 109 TGLDQYYGPLAFSTNYPNVYDQSLKKTGGGIWIHGLPLNGNREDINTRGCIAIDNELLKK 168 >ErfK_YbiS_YhnG_Q8G821_57-179_PF03734.4 Length = 123 Score = 59.8 bits (144), Expect = 4e-08 Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 26/138 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S + +++ ++++ + ++ Y +I +P G Y + Sbjct: 1 YSDLSVKVSIAKQEVYV-QSGGETIYTMIA----STGLNDT----------TPRGNYVIG 45 Query: 72 PNQ---LNPDSRYYLAINIGFPNAYDRAHGYTG---KYLM-----IHGACVSVGCYAMTD 120 NP + F + TG M G S GC +T Sbjct: 46 MRGDHFYNPAEGMGADYWVRFNGPFLFHSVPTGANSGEYMEEEGNKLGQPASHGCVRLTV 105 Query: 121 AQIDEIFAFVRDAFVGGQ 138 A + + + + Sbjct: 106 ADAEWFYNQIPEGTPVTI 123 >gi|33632702|emb|CAE07514.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 181 Score = 59.4 bits (143), Expect = 5e-08 Identities = 16/128 (12%), Positives = 30/128 (23%), Gaps = 41/128 (32%) Query: 43 YPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINI----GFPNAYDRAH- 97 +P+ G ++P G ++V P + + G N Sbjct: 61 FPVATGMPGW---------ETPTGSFAVFQKIDQPVWVHPVTGERVEEQGPDNPLGSHWI 111 Query: 98 -------GYT--GKYLMI----------HGAC--------VSVGCYAMTDAQIDEIFAFV 130 G I HG +S GC + + + ++ V Sbjct: 112 AFQRDCLGRDAHDGDRWITIKGCTTTGFHGTPHRWTVGRAISHGCVRLYNEDVRRLYGQV 171 Query: 131 RDAFVGGQ 138 Sbjct: 172 MLGTQVTV 179 >ErfK_YbiS_YhnG_Q83BU9_47-172_PF03734.4 Length = 126 Score = 59.4 bits (143), Expect = 5e-08 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 17/129 (13%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + ++ +LIK + G PK + ++P G + + Sbjct: 5 LFVFDPKRHRWYAYQN-----GRLIKQGRASGGAYG-CPKNKSRSCRTPSGTFRIIRKGP 58 Query: 76 -NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEI-F 127 N S Y + G A + IHG+ S GC +T A + Sbjct: 59 PNCKSTRYPKPHGG---ARMDYCMCYHAFYCIHGSDHVPNYHASHGCIRVTPADARWLSH 115 Query: 128 AFVRDAFVG 136 F++ Sbjct: 116 NFIQYGTKV 124 >gi|28379499|ref|NP_786391.1| cell surface protein, ErfK family [Lactobacillus plantarum WCFS1] Length = 209 Score = 59.0 bits (142), Expect = 6e-08 Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 40/154 (25%) Query: 8 QQLPG----SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 P ++I + +++L L Y + S + D ++ Sbjct: 72 VAYPNVNRYPDLWIHVSLAKQRLYLM-NHHHVLYTMYASSGVPT-----------ADRKT 119 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------------ 111 P G Y VQ + +Y+ + ++ AY + H V Sbjct: 120 PRGTYHVQAER----GKYFYSASVD-EGAYYWVSWLNHGEYLFHSTPVDAQGHFIKSDAA 174 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC ++ A ++ ++ Sbjct: 175 DLGKRPSSHGCIHLSVADSKWVYNNIKYGTKVVI 208 >ErfK_YbiS_YhnG_Q89BJ1_28-145_PF03734.4 Length = 118 Score = 58.7 bits (141), Expect = 9e-08 Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 32/141 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + I K +++ + + S+P+ G G +P + Q Sbjct: 2 ADLRVDIDKSSQRMSV-----RVDGAPRYSWPVSTGCSGYG---------TPSDTFHPQA 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 SR Y N+ + IHG S GC + A Sbjct: 48 MMRRYFSRRYY-------NSPMPHAIFFHYGFAIHGTTDIYRLGGPASHGCVRLHPAHAA 100 Query: 125 EIFAFVRDAFVGGQPSVQVSI 145 +FA V+ G + + I Sbjct: 101 ALFALVQ---REGARNTTIRI 118 >gi|68263184|emb|CAI36672.1| putative lipoprotein [Corynebacterium jeikeium K411] Length = 402 Score = 58.3 bits (140), Expect = 1e-07 Identities = 16/144 (11%), Positives = 41/144 (28%), Gaps = 26/144 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + + + + + + +++ P+ + + +P G Y + Sbjct: 245 GDAMRAIVDDSTKMMTI-----KKNGKTVQTMPVSLGR--------DYQYPTPNGKYIIG 291 Query: 72 PNQLNPD---SRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAM 118 S + L + A + + IH A S GC + Sbjct: 292 DQFETLTMDSSTFGLTGAGSYVTDVQYATQMSYSGIYIHAAPWSVYAQGNTNTSHGCINV 351 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQ 142 + +F ++ + + Q Sbjct: 352 SVENAAWVFNNMKRGDIVEVKNTQ 375 >gi|69929507|ref|ZP_00626384.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 96 Score = 58.3 bits (140), Expect = 1e-07 Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 9/88 (10%) Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------V 111 ++P Y+ + SR I G N + + IHG Sbjct: 7 NRNPTYRYNPAYHFKGVHSRKPFTIRPGPNNPVGTIWINLSIEGYGIHGTPFPGKVSKSE 66 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC +T+ + + V Sbjct: 67 SHGCVRLTNWDAERVAQRVSKGTPVTFV 94 >ErfK_YbiS_YhnG_Q7U7I3_35-179_PF03734.4 Length = 145 Score = 57.9 bits (139), Expect = 1e-07 Identities = 16/128 (12%), Positives = 30/128 (23%), Gaps = 41/128 (32%) Query: 43 YPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINI----GFPNAYDRAH- 97 +P+ G ++P G ++V P + + G N Sbjct: 27 FPVATGMPGW---------ETPTGSFAVFQKIDQPVWVHPVTGERVEEQGPDNPLGSHWI 77 Query: 98 -------GYT--GKYLMI----------HGAC--------VSVGCYAMTDAQIDEIFAFV 130 G I HG +S GC + + + ++ V Sbjct: 78 AFQRDCLGRDAHDGDRWITIKGCTTTGFHGTPHRWTVGRAISHGCVRLYNEDVRRLYGQV 137 Query: 131 RDAFVGGQ 138 Sbjct: 138 MLGTQVTV 145 >gi|62514272|ref|ZP_00385780.1| COG1376: Uncharacterized protein conserved in bacteria [Lactobacillus casei ATCC 334] Length = 483 Score = 57.9 bits (139), Expect = 1e-07 Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 27/134 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + KE++ K + +++ I G +P G + V Q Sbjct: 361 YVEVSKEKQHEWYIK-----DGKVVMDSDIVTGKPG---------QDTPSGVFYVWSKQR 406 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N R + + + +H + S GC Sbjct: 407 NATLRGKNDDGSSYASPVSYWMPIDYTGVGLHDSPWQPKYGGDWYKEHGSHGCVNNPPDF 466 Query: 123 IDEIFAFVRDAFVG 136 + +++A V + Sbjct: 467 MAKLYAAVDEGTPV 480 >gi|54297296|ref|YP_123665.1| hypothetical protein lpp1341 [Legionella pneumophila str. Paris] Length = 157 Score = 57.9 bits (139), Expect = 1e-07 Identities = 20/116 (17%), Positives = 31/116 (26%), Gaps = 15/116 (12%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP--DSRYYLAINIGFPN 91 ++I++ RR ++P G + V P S Y G P Sbjct: 47 SANGKVIRTGRGSGGKHYCSDVRRSC--KTPSGVFRVISKG-GPACRSSRYPLGKGGAPM 103 Query: 92 AYDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEI-FAFVRDAFVGGQPS 140 Y IHG S GC + + F++ S Sbjct: 104 PYCMFFSKL---YAIHGSPDVPNYNASHGCVRVKPHDARWLSQNFIKIGTKVIIKS 156 >gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Nocardia farcinica IFM 10152] Length = 253 Score = 57.9 bits (139), Expect = 2e-07 Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 24/117 (20%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-PDSRYYLAINIGFPNAY-- 93 Q++++ P G ++P G + V + + I + P Y Sbjct: 144 GQVVRTMPASMGKPGF---------ETPTGTFPVLEKFRSIVFDSRTIGIPLSSPEGYLI 194 Query: 94 -DRAHGY-TGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 T + +H A S GC ++ + V Sbjct: 195 DGEYAVRLTWGGVFVHSAPWSVDSQGYANVSHGCINLSPDDAAWYYNTVGIGDPVYI 251 >ErfK_YbiS_YhnG_Q5YU65_123-251_PF03734.4 Length = 129 Score = 57.9 bits (139), Expect = 2e-07 Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 24/117 (20%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-PDSRYYLAINIGFPNAY-- 93 Q++++ P G ++P G + V + + I + P Y Sbjct: 22 GQVVRTMPASMGKPGF---------ETPTGTFPVLEKFRSIVFDSRTIGIPLSSPEGYLI 72 Query: 94 -DRAHGY-TGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 T + +H A S GC ++ + V Sbjct: 73 DGEYAVRLTWGGVFVHSAPWSVDSQGYANVSHGCINLSPDDAAWYYNTVGIGDPVYI 129 >gi|68002719|ref|ZP_00535287.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 303 Score = 57.1 bits (137), Expect = 2e-07 Identities = 21/118 (17%), Positives = 35/118 (29%), Gaps = 23/118 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I I E+ + ++ +L S P G ++P G + + Sbjct: 135 FILISLTEQWIGAYEN-----GKLKFSMPAATGKTG---------HETPTGLFRIDARHR 180 Query: 76 NPDSRYYLAINIGFPNAYDRAH----GYTGKYLMIH-----GACVSVGCYAMTDAQID 124 S Y ++ D A G IH G S GC + D + Sbjct: 181 THTSSLYQTDDLSAQYPMDFAMRFHIGADNVSYWIHARDLPGKPASHGCVGLFDESMQ 238 >ErfK_YbiS_YhnG_Q88T96_80-208_PF03734.4 Length = 129 Score = 57.1 bits (137), Expect = 2e-07 Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 36/146 (24%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++I + +++L L Y + S + D ++P G Y VQ Sbjct: 1 YPDLWIHVSLAKQRLYLM-NHHHVLYTMYASSGVPT-----------ADRKTPRGTYHVQ 48 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------S 112 + +Y+ + ++ AY + H V S Sbjct: 49 AER----GKYFYSASVD-EGAYYWVSWLNHGEYLFHSTPVDAQGHFIKSDAADLGKRPSS 103 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC ++ A ++ ++ Sbjct: 104 HGCIHLSVADSKWVYNNIKYGTKVVI 129 >gi|48870290|ref|ZP_00323015.1| COG1376: Uncharacterized protein conserved in bacteria [Pediococcus pentosaceus ATCC 25745] Length = 221 Score = 57.1 bits (137), Expect = 3e-07 Identities = 15/150 (10%), Positives = 39/150 (26%), Gaps = 46/150 (30%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ ++++ + K +++ + S + +P G + +Q Sbjct: 94 YPKAFLKVSIAKQRVYVMNGK-----KVLYTMYASTGSH---------ESPTPTGTFKIQ 139 Query: 72 PNQ----LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV---------------- 111 + NP S+ + F + H Sbjct: 140 AERGDFFYNPTSKEGAKYWVSF---------KDHGIYLFHTVPTDKNGKFLEDEAEQLGK 190 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + I+ V + Sbjct: 191 EAQSHGCVRLAVPDAKWIYEKVPEGMKVEI 220 >gi|48871054|ref|ZP_00323771.1| COG5295: Autotransporter adhesin [Pediococcus pentosaceus ATCC 25745] Length = 467 Score = 56.4 bits (135), Expect = 4e-07 Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 25/134 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + K + + +K + +L S + + +P G + V + Sbjct: 343 YVEVDKTNQHMWYYK-----DGKLKISTDVVTGMP-------ANNDDTPTGVFFVWNKKR 390 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACV-----SVGCYAMTDAQ 122 N + + + + +H G S GC A Sbjct: 391 NATLKGKNTDGSNYASPVSYWMPIDYTGVGLHDASWQPKFGGDWYKTHGSHGCVNTPPAT 450 Query: 123 IDEIFAFVRDAFVG 136 + ++A V Sbjct: 451 MKTVYAEVALGTPV 464 >gi|38234386|ref|NP_940153.1| Putative lipoprotein [Corynebacterium diphtheriae NCTC 13129] Length = 389 Score = 56.4 bits (135), Expect = 4e-07 Identities = 23/146 (15%), Positives = 43/146 (29%), Gaps = 32/146 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + ++K Q + S P+ + +P G Y++ Sbjct: 232 GDRVEAVADDATKTMVIYKN-----GQQVNSMPVSMGANKW---------PTPNGIYTIG 277 Query: 72 PNQLNPDS-----RYYLAIN-IGFPNAYDRAHGYTGKYLMIHGACVS----------VGC 115 NP Y LA N G+ A + + +H A S GC Sbjct: 278 DK--NPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGC 335 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSV 141 ++ +V+ + + Sbjct: 336 INVSTDNAAWFQNYVKRGDIVRVQNT 361 >gi|28379551|ref|NP_786443.1| cell surface protein, ErfK family [Lactobacillus plantarum WCFS1] Length = 219 Score = 56.4 bits (135), Expect = 4e-07 Identities = 21/159 (13%), Positives = 44/159 (27%), Gaps = 41/159 (25%) Query: 3 SKELKQQLPG----SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 E P + I + ++++ L KA Y ++ + G Sbjct: 78 PSESNHPYPNVQNYPNLRIDVSVAKQRVYL-KAGNKLLYTMLAT----TGKPGA------ 126 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------- 111 +P+G + +QP + Y ++N G A + H V Sbjct: 127 --NATPKGDFVIQPERGLHF--YNASLNEG---ANYWVSFKDHGVYLFHSVPVDASDHYI 179 Query: 112 ------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC ++ + ++ + Sbjct: 180 ASKAALLGKRSDSHGCVRLSISDAKWMYEHIPVNTPVHI 218 >ErfK_YbiS_YhnG_Q5WX10_101-234_PF03734.4 Length = 134 Score = 56.4 bits (135), Expect = 4e-07 Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 16/118 (13%) Query: 22 EERKLELWKAK-----MGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 E+ + + + K + +L+ PI +G + G +P G + + Q Sbjct: 2 GEKTIYVSQKKLAWGAYDEDGELLWWGPISSG---VGKCKVIGGCSTPTGSFRIIRKQDI 58 Query: 77 -------PDSRYYLAINIGFPNAYDRAHGYT-GKYLMIHGACVSVGCYAMTDAQIDEI 126 P P GY + G S GC M + Sbjct: 59 DCVSTVFPRRANGEHGGALMPYCMHFFRGYALHGSYEVPGYRASHGCVRMFIEDARWL 116 >gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 192 Score = 56.4 bits (135), Expect = 4e-07 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 31/142 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + + K+ +++ + + ++ ++P+ G +P G Y Sbjct: 23 ADLLVAVDKDAQRMSVL-----VDGEIRYTWPVSTGIAG---------HDTPNGSYRPFR 68 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 + SR + P + G IHG S GC ++ Sbjct: 69 MEKTHFSREWD----NAPMPHAIFFTQVGH--AIHGTTQTRRLGRAASHGCVRLSQRNAA 122 Query: 125 EIFAFVRDAFVGGQPSVQVSIY 146 +FA V+ +V I Sbjct: 123 TLFALVKQQT---MARTRVVIE 141 >gi|22294409|dbj|BAC08239.1| tsr0688 [Thermosynechococcus elongatus BP-1] Length = 84 Score = 56.4 bits (135), Expect = 5e-07 Identities = 19/89 (21%), Positives = 27/89 (30%), Gaps = 20/89 (22%) Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY----LMIHGAC--------VSVGCYAM 118 P NP + N R + +HG VS GC M Sbjct: 4 DPAWKNPF-TGAVIAGGHPQNPLGRRWIGFWSDGTNWVGLHGTPNPDSIGHAVSHGCVRM 62 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 + I+E+F V+ V V + P Sbjct: 63 YNRDIEELFEKVQLG-------VPVIVVP 84 >gi|54294224|ref|YP_126639.1| hypothetical protein lpl1289 [Legionella pneumophila str. Lens] Length = 248 Score = 56.4 bits (135), Expect = 5e-07 Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 16/118 (13%) Query: 22 EERKLELWKAK-----MGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 E+ + + + K + +L+ PI +G + G +P G + + Q Sbjct: 102 GEKTIYVSQKKLAWGAYDEDGELLWWGPISSG---VGKCKVIGGCSTPTGSFRIIRKQDI 158 Query: 77 -------PDSRYYLAINIGFPNAYDRAHGYT-GKYLMIHGACVSVGCYAMTDAQIDEI 126 P P GY + G S GC M + Sbjct: 159 DCVSTVFPRRANGEHGGALMPYCMHFFRGYALHGSYEVPGYRASHGCVRMFIEDARWL 216 >gi|31790351|gb|AAP58608.1| hypothetical protein [uncultured Acidobacteria bacterium] Length = 335 Score = 56.0 bits (134), Expect = 6e-07 Identities = 23/148 (15%), Positives = 44/148 (29%), Gaps = 24/148 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEG 66 + + + +L LW+ + +KSY I +G + +P Sbjct: 84 DQPDIRLTLNVPTFRLTLWQN-----GKEVKSYYIGVGMKEHPLDIGAREAREIIWNPAW 138 Query: 67 FYSVQ--PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVGCY 116 ++ S + N + G +IH G VS GC Sbjct: 139 IPPPSDWVREMKGVSPGEVIKASDPRNPLGKLKIPLGDSYLIHQARGWSDVGNLVSHGCV 198 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 M ++ ++ + S+ VS Sbjct: 199 RMPRPELYDLADKI-----VAARSLPVS 221 >gi|58337862|ref|YP_194447.1| putative cell surface protein [Lactobacillus acidophilus NCFM] Length = 229 Score = 56.0 bits (134), Expect = 6e-07 Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 25/143 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + + +R+ + + L + ++I + G ++G +P G Y +Q Sbjct: 97 ETDLTLRVSLKGNRTYLLRK-----GKVIYT------MLSTGGIYKKGKSLTPTGTYRIQ 145 Query: 72 PNQLNPDSRYYLAINIGF-----PNAYDRAH---GYTGKYLMIH-----G-ACVSVGCYA 117 + + Y L P+ H ++ G S GC Sbjct: 146 AGRGDSFFNYNLNEGANNWTSWSPDNVYLFHSVPTKGDGNYNLNEAAKLGRTQGSHGCIR 205 Query: 118 MTDAQIDEIFAFVRDAFVGGQPS 140 ++ I + D Sbjct: 206 LSIPDSKWIMDNIPDGTKVVIKD 228 >gi|53804847|ref|YP_113494.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str. Bath] Length = 481 Score = 56.0 bits (134), Expect = 6e-07 Identities = 21/178 (11%), Positives = 42/178 (23%), Gaps = 39/178 (21%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 G+ I ++ + + + + Q ++++ + + G + Sbjct: 316 STGTDRKIFVYLDTQTMTAVEN-----GQTVRTFKVSTGKPQT---------PTVTGSFY 361 Query: 70 V-------QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMT 119 + I P A Y H G S GC M+ Sbjct: 362 IYARFPTKTMKSRAKKGEKGHYIVENVPYAQYFYSDYAFHGAWWHNGFGRPASHGCVNMS 421 Query: 120 -----------DAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR----HRNSP 162 ++ + S R+ QR R+SP Sbjct: 422 TQKHNVRWPKAPEDAGWLYQWASLGVPVTVMHSPPSSTSTRIALEEPQRDRPGVRSSP 479 >ErfK_YbiS_YhnG_Q8DL11_2-82_PF03734.4 Length = 81 Score = 55.6 bits (133), Expect = 7e-07 Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 13/78 (16%) Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY----LMIHGAC--------VSVGCYAM 118 P NP + N R + +HG VS GC M Sbjct: 3 DPAWKNPF-TGAVIAGGHPQNPLGRRWIGFWSDGTNWVGLHGTPNPDSIGHAVSHGCVRM 61 Query: 119 TDAQIDEIFAFVRDAFVG 136 + I+E+F V+ Sbjct: 62 YNRDIEELFEKVQLGVPV 79 >ErfK_YbiS_YhnG_Q5FIQ8_97-226_PF03734.4 Length = 130 Score = 55.6 bits (133), Expect = 7e-07 Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 25/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + + +R+ + + L + ++I + G ++G +P G Y +Q Sbjct: 1 ETDLTLRVSLKGNRTYLLRK-----GKVIYT------MLSTGGIYKKGKSLTPTGTYRIQ 49 Query: 72 PNQLNPDSRYYLAINIGF-----PNAYDRAH---GYTGKYLMIH-----G-ACVSVGCYA 117 + + Y L P+ H ++ G S GC Sbjct: 50 AGRGDSFFNYNLNEGANNWTSWSPDNVYLFHSVPTKGDGNYNLNEAAKLGRTQGSHGCIR 109 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 ++ I + D Sbjct: 110 LSIPDSKWIMDNIPDGTKVVI 130 >ErfK_YbiS_YhnG_Q88Z40_337-463_PF03734.4 Length = 127 Score = 55.6 bits (133), Expect = 7e-07 Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 26/134 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + KE + + ++ + +L S I G + G + + + Sbjct: 5 YVEVDKENQHMYVY-----VDGKLTVSTDIVTGKPGK--------HATTTGVWYIWNKEK 51 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N + + + IH + S GC + Sbjct: 52 NATLKGDNDDGSSYSQPVSYWMPFDDTGEGIHDSSWQTQYGGTWYKKHGSHGCVNTPPSV 111 Query: 123 IDEIFAFVRDAFVG 136 + ++FA V Sbjct: 112 MKKVFAAVPVGTPV 125 >gi|15828436|ref|NP_302699.1| possible secreted protein [Mycobacterium leprae TN] Length = 251 Score = 55.6 bits (133), Expect = 7e-07 Identities = 15/138 (10%), Positives = 32/138 (23%), Gaps = 29/138 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + +++++ P +P G ++ + Sbjct: 128 VASLSTHTFTV-----SRNGEVLRTMPASMGKP---------TRPTPIGKFTALSKERTV 173 Query: 78 -DSRYYLAINIGFPNAYDRAHGY----TGKYLMIHG----------ACVSVGCYAMTDAQ 122 + I + P Y Y T + +H VS GC ++ Sbjct: 174 VMDSRTIGIPLNSPEGYLITAQYAVRVTWSGVYVHSAPWSVNSQGYTNVSHGCINLSPDD 233 Query: 123 IDEIFAFVRDAFVGGQPS 140 F V + Sbjct: 234 ATWYFNTVNVGDPIEVVA 251 >ErfK_YbiS_YhnG_Q8NMT9_240-368_PF03734.4 Length = 129 Score = 55.6 bits (133), Expect = 8e-07 Identities = 18/139 (12%), Positives = 40/139 (28%), Gaps = 34/139 (24%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + + ++K +L+++ P+ ++ +P G Y + N Sbjct: 7 VADDATKTMSVYKN-----GELLRTMPVSFGRD-------TSEWATPNGTYIIGD--RNE 52 Query: 78 DSRYYLA-INIGF-------PNAYDRAHGYTGKYLMIHGACVS----------VGCYAMT 119 +G+ P Y Y+G + +H A S GC ++ Sbjct: 53 SMIMDSTTFGLGYEEGGYRTPVKYATQMSYSG--IYVHAAPWSVGAQGSYNTSHGCINVS 110 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 V+ + Sbjct: 111 TENAQWFQEAVKRGDIVTV 129 >gi|61102228|ref|ZP_00377682.1| hypothetical protein ELI2923 [Erythrobacter litoralis HTCC2594] Length = 226 Score = 55.6 bits (133), Expect = 8e-07 Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 27/137 (19%) Query: 11 PGSPVYIR--IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 + I + + R + ++K I + LG +P G + Sbjct: 99 APAEGKIVMTVDLKARVISVFKGGHE----------IGAAAVLLGTDE----HPTPLGTF 144 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-----SVGCYAMTDAQI 123 ++ + S Y P Y G + +HG+ V S GC M D Sbjct: 145 PIKYKMRHNVSEKYD----NAPMPYSMFLTDDG--VALHGSDVENGYASHGCVGMPDDFA 198 Query: 124 DEIFAFVRDAFVGGQPS 140 ++FA Sbjct: 199 AKVFAVAGKGDQVIITD 215 >ErfK_YbiS_YhnG_Q8G566_403-530_PF03734.4 Length = 128 Score = 55.2 bits (132), Expect = 8e-07 Identities = 16/137 (11%), Positives = 33/137 (24%), Gaps = 31/137 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++ + + ++ ++K + I +G S G + V Sbjct: 5 WVHVDLTNQTATAYQG-----TTVVKKFNIASGKP-----TADGSMLSDTGTFYVYLKYE 54 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------------SVGCYAMT 119 + + G+ Y +HG S GC M Sbjct: 55 SQTM-----VGEGYNQPGTPWVSYYNGGEALHGVPAYMWGEHPIYVQQGIPGSHGCINMQ 109 Query: 120 DAQIDEIFAFVRDAFVG 136 A ++ F Sbjct: 110 VADAKWMYDFATIGTRV 126 >gi|38233153|ref|NP_938920.1| Putative secreted protein [Corynebacterium diphtheriae NCTC 13129] Length = 269 Score = 55.2 bits (132), Expect = 8e-07 Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 22/121 (18%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 I +++ L + + PI G ++P+G + V + Sbjct: 165 IDLAQQRAWLQQDGRVVYGAV----PISSGRPGW---------ETPQGVFHVNRKVKDEI 211 Query: 79 SRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---VSVGCYAMTDAQIDEIFAFVRDAFV 135 SR + P Y +T + H +S GC + F ++ + Sbjct: 212 SREFN----NAPMPYSVY--FTNNGIAFHQDNPNVMSHGCIHLWHNDAVTFFNTLQYGDM 265 Query: 136 G 136 Sbjct: 266 V 266 >gi|4539222|emb|CAB39880.1| putative secreted protein [Streptomyces coelicolor A3(2)] Length = 424 Score = 55.2 bits (132), Expect = 9e-07 Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 29/151 (19%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + + V L +++ + + I+ P+ G ++ Sbjct: 239 KPLKITTDDRVVAVTDAAAHTLTVYQ-----DGEAIREIPVTTGKPGF---------ETR 284 Query: 65 EGFYSVQPNQ---LNPDSRYYLAINIG--FPNAYDRAHGYTGKYLMIHGACVS------- 112 G V + S +A + A T +H A S Sbjct: 285 NGVKVVLGKESFVRMRSSTVGIAEGSSEAYDLPVYWATRVTWSGEYVHAAPWSVGSQGIA 344 Query: 113 ---VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC M+ + F V++ + + Sbjct: 345 NVSHGCVGMSTDSAEWFFNTVQEGDLVEVVN 375 >gi|48870588|ref|ZP_00323309.1| COG1376: Uncharacterized protein conserved in bacteria [Pediococcus pentosaceus ATCC 25745] Length = 477 Score = 55.2 bits (132), Expect = 1e-06 Identities = 22/146 (15%), Positives = 40/146 (27%), Gaps = 35/146 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +L L + + + + I S + +P G Y ++ Sbjct: 348 IEIDLTHERLYLVQNQ-----TVAQKIRINTGSPKINIA-------TPTGAYFIKFKIAP 395 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------------SVGCYAMTD 120 R Y + + +A T + IH A S GC + Sbjct: 396 ITMRGYEKNGEPYKSYVPQADNLTDDGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPP 455 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIY 146 + +++ V IY Sbjct: 456 KDMVKLYQKTTV-------DEPVIIY 474 >gi|67987357|gb|EAM75155.1| ErfK/YbiS/YcfS/YnhG [Kineococcus radiotolerans SRS30216] Length = 406 Score = 55.2 bits (132), Expect = 1e-06 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 25/146 (17%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----QPNQ 74 + L + + Q++++ P+ G G G F + G + + + Sbjct: 251 VDIAAHTLTV-----TRDGQVLRTIPVTTGQSGSG-----GRFVTRSGTKVIMSLEESRE 300 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACVS----------VGCYAMTDAQI 123 +N ++ + + N + T +H A S GC M+ A Sbjct: 301 MNSETTGIGQDDPDYYNVDVQYAMRLTNSGEFLHAAPWSVSSQGRANVSHGCTGMSTADA 360 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFR 149 +F + V I P Sbjct: 361 QWMFQNSKVGDVVTYTGSDRVIEPGN 386 >gi|29654445|ref|NP_820137.1| enhanced entry protein EnhA, putative [Coxiella burnetii RSA 493] Length = 248 Score = 54.8 bits (131), Expect = 1e-06 Identities = 26/131 (19%), Positives = 41/131 (31%), Gaps = 12/131 (9%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAY 93 E QLIK PI R ++ G + V + P + + A Sbjct: 123 DPEGQLIKWGPISSGKNYCRDVNRSC--ETITGIFYVFHKK-GPGCKSNVFPVETSGGAV 179 Query: 94 DRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEIF-AFVRDAFVGGQPSVQVSIY 146 + K +HG+ S GC + + FV A G +V + Sbjct: 180 MPYCMFFFKGYALHGSNEVTGYRDSHGCVRLFKRDAKWLNENFVNVATKDGHLGTKVVVE 239 Query: 147 PFRMTDANMQR 157 ++T N R Sbjct: 240 --KLTMENSGR 248 >gi|68191412|gb|EAN06068.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 139 Score = 54.8 bits (131), Expect = 1e-06 Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 31/123 (25%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 R+ ++ + + K Q++ +P+ G + +P G + Sbjct: 26 RVSLSKQVMTVKKGN-----QVLYRWPVSTARKG---------YVTPRGRWKPTRMHRMW 71 Query: 78 DSR-YYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIFA 128 SR Y ++ P + + + IHG S GC + ++++ Sbjct: 72 RSRKYDMS-----PMPFSIFY---HRGYAIHGTYAVKSLGRRASHGCVRLHPDNAAKLYS 123 Query: 129 FVR 131 V+ Sbjct: 124 LVK 126 >ErfK_YbiS_YhnG_Q9ZBE6_121-249_PF03734.4 Length = 129 Score = 54.8 bits (131), Expect = 1e-06 Identities = 15/131 (11%), Positives = 31/131 (23%), Gaps = 29/131 (22%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + +++++ P +P G ++ + Sbjct: 8 VASLSTHTFTV-----SRNGEVLRTMPASMGKP---------TRPTPIGKFTALSKERTV 53 Query: 78 -DSRYYLAINIGFPNAYDRAHGY----TGKYLMIHG----------ACVSVGCYAMTDAQ 122 + I + P Y Y T + +H VS GC ++ Sbjct: 54 VMDSRTIGIPLNSPEGYLITAQYAVRVTWSGVYVHSAPWSVNSQGYTNVSHGCINLSPDD 113 Query: 123 IDEIFAFVRDA 133 F V Sbjct: 114 ATWYFNTVNVG 124 >gi|16077404|ref|NP_388217.1| hypothetical protein BSU03350 [Bacillus subtilis subsp. subtilis str. 168] Length = 194 Score = 54.4 bits (130), Expect = 1e-06 Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 27/151 (17%) Query: 4 KELKQQLP---GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 K + P V+I + +E+K + + I + I D Sbjct: 54 KPSGGEYPDIKQKHVWIDVNVKEQKAYIKEGSNT-----IYTMMISSGLDQT------KD 102 Query: 61 FQSPEGFYSVQPNQ----LNPDSRYYLAINIGFPN---------AYDRAHGYTGKYLMIH 107 +P+G + V+P + + + + + N + Sbjct: 103 DATPKGTFYVEPERGEWFFSEGYQEGAEYWVSWKNHGEFLFHSVPMTKDQKVIKTEAEKL 162 Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G VS GC +T ++ + + Sbjct: 163 GTKVSHGCIRLTIPDAKWVYENIPEHTKVVI 193 >ErfK_YbiS_YhnG_Q6N429_21-139_PF03734.4 Length = 119 Score = 54.4 bits (130), Expect = 1e-06 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 28/128 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + V I + K+ ++L + + +P+ + ++P G + Sbjct: 1 EAKVAITVDKDSQQLSV-----AVDGVERYRWPVSTGNP---------SHETPNGKFQTF 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQI 123 + + S+ + P + G IHG VS GC ++ Sbjct: 47 RMEADHYSKEFD----DAPMPHSIFFTKQGH--AIHGTDAAGKLGVPVSHGCVRLSRDNA 100 Query: 124 DEIFAFVR 131 ++A V Sbjct: 101 ATLYALVE 108 >ErfK_YbiS_YhnG_Q5ZVQ4_29-154_PF03734.4 Length = 126 Score = 54.4 bits (130), Expect = 2e-06 Identities = 18/113 (15%), Positives = 29/113 (25%), Gaps = 13/113 (11%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-LNPDSRYYLAINIGFPNA 92 ++I++ RR ++P G + V S Y G P Sbjct: 19 SSNGKVIRTGRGSGGKHYCSDVRRSC--KTPSGVFRVISKGGPACRSSRYPLGKGGAPMP 76 Query: 93 YDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEI-FAFVRDAFVGGQ 138 Y IHG S GC + + F++ Sbjct: 77 YCMFFSKL---YAIHGSPDVPNYNASHGCVRVKPHDARWLSQNFIKIGTKVII 126 >ErfK_YbiS_YhnG_Q9X811_245-373_PF03734.4 Length = 129 Score = 54.4 bits (130), Expect = 2e-06 Identities = 18/136 (13%), Positives = 36/136 (26%), Gaps = 29/136 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ--- 74 L +++ + + I+ P+ G ++ G V + Sbjct: 8 VTDAAAHTLTVYQ-----DGEAIREIPVTTGKPGF---------ETRNGVKVVLGKESFV 53 Query: 75 LNPDSRYYLAINIG--FPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQ 122 S +A + A T +H A S GC M+ Sbjct: 54 RMRSSTVGIAEGSSEAYDLPVYWATRVTWSGEYVHAAPWSVGSQGIANVSHGCVGMSTDS 113 Query: 123 IDEIFAFVRDAFVGGQ 138 + F V++ + Sbjct: 114 AEWFFNTVQEGDLVEV 129 >gi|40217343|emb|CAE09094.1| putative lipoprotein Lpps [Gordonia westfalica] Length = 390 Score = 54.4 bits (130), Expect = 2e-06 Identities = 14/121 (11%), Positives = 32/121 (26%), Gaps = 24/121 (19%) Query: 36 EYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-----PDSRYYLAINIGFP 90 + ++I++ P +P G Y + + + G+ Sbjct: 251 DGKVIRTMPTSFGKDST---------PTPRGIYMIGDRVEHIIMDSSTYGVPVESAAGYR 301 Query: 91 NAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 A + + +HGA S GC ++ A + + + Sbjct: 302 TPVQWAVQMSYSGIYMHGAPWSMSAQGNSNVSNGCPNLSPADAEWLVKNTLRGDPVTVKN 361 Query: 141 V 141 Sbjct: 362 T 362 >gi|71544473|ref|ZP_00665504.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 294 Score = 54.0 bits (129), Expect = 2e-06 Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 21/139 (15%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I I K+ + ++ +++ IC D + G Y+V+ Sbjct: 148 PQFILISKDLHFIGWYEN-----GKMVGDSYICIGKE---------DAWTKAGLYTVKNK 193 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA-----CVSVGCYAMTDAQIDEIFA 128 + SR Y N A ++ +H S GC + ++F Sbjct: 194 DADHVSRSYR--NADGVWAPMPYALRIYDHVWVHAGDIERGNCSHGCINLPLMPARDLFT 251 Query: 129 FVRDAFVGGQPSVQVSIYP 147 + + I P Sbjct: 252 WAKVGTPVLVVDSLRDIGP 270 >gi|71546012|ref|ZP_00666894.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 291 Score = 54.0 bits (129), Expect = 2e-06 Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 25/134 (18%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I I K+ L + +LI IC + G Y V Sbjct: 145 PKFILIAKDIPFL-----GWYQQGKLIGDTQICIGKM---------FGWTKAGVYRVLDK 190 Query: 74 QLNPDSR-YYLAINIGFPNAYDRAHGYTGKYLMIH------GACVSVGCYAMTDAQIDEI 126 ++ S+ Y A P + + +H G C S GC + +E+ Sbjct: 191 DIDHISQSYTNAFGEPAPMP---YALRIYERVWVHMGDVIGGYC-SHGCINLPMGPSEEV 246 Query: 127 FAFVRDAFVGGQPS 140 + + + Sbjct: 247 YEWADKGTMVVIVD 260 >gi|52857829|ref|ZP_00341684.1| COG1376: Uncharacterized protein conserved in bacteria [Lactobacillus gasseri] Length = 225 Score = 54.0 bits (129), Expect = 2e-06 Identities = 16/139 (11%), Positives = 41/139 (29%), Gaps = 25/139 (17%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ- 74 +IR+ + ++ + Y ++ S + G +P G Y+V+ + Sbjct: 97 WIRVSIKGNRVYIMDGNK-PVYTMLASCGV----------YHNGKSATPTGTYAVEAERG 145 Query: 75 -------LNPDSRYYLAINIGFPNAYDRAHGYTGKYLM------IHGACVSVGCYAMTDA 121 L +R Y++ + + +M + S GC ++ Sbjct: 146 ATFFNQSLQVGARTYISWHGHGTYLFHSVPTDGNNKIMKNEAKKLGKTQASHGCIRLSIP 205 Query: 122 QIDEIFAFVRDAFVGGQPS 140 ++ + Sbjct: 206 DSKWLYEKLPVGTKVVVKD 224 >ErfK_YbiS_YhnG_Q88T44_91-218_PF03734.4 Length = 128 Score = 53.7 bits (128), Expect = 3e-06 Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 37/142 (26%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + ++++ L KA Y ++ + G +P+G + +QP + Sbjct: 5 RIDVSVAKQRVYL-KAGNKLLYTMLAT----TGKPGA--------NATPKGDFVIQPERG 51 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------SVGCY 116 Y ++N G A + H V S GC Sbjct: 52 LHF--YNASLNEG---ANYWVSFKDHGVYLFHSVPVDASDHYIASKAALLGKRSDSHGCV 106 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 ++ + ++ + Sbjct: 107 RLSISDAKWMYEHIPVNTPVHI 128 >gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Nocardia farcinica IFM 10152] Length = 326 Score = 53.7 bits (128), Expect = 3e-06 Identities = 18/122 (14%), Positives = 32/122 (26%), Gaps = 28/122 (22%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN---PDSRYYLAINIGFPNAY 93 +++K+ P G ++P G Y V S Y + I P Y Sbjct: 201 GEVVKTMPTSLGKPG---------HETPNGTYIVGERHRQMVMDSSTYG--VPIDAPEGY 249 Query: 94 DR---AHGY-TGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + + +H A S GC ++ F + Sbjct: 250 KLDVEYATRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKGDPVIVQ 309 Query: 140 SV 141 + Sbjct: 310 NT 311 >gi|15023630|gb|AAK78723.1| Secreted protein containing uncharacterized conserved protein of ErfK family [Clostridium acetobutylicum ATCC 824] Length = 466 Score = 53.7 bits (128), Expect = 3e-06 Identities = 18/134 (13%), Positives = 35/134 (26%), Gaps = 31/134 (23%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + ++ L +K L+ + E D +P G Y ++ + Sbjct: 347 YVEVDLSKQHLWFYKN-----GSLVVQGDVVTG------NVSENDA-TPAGVYRLKYKER 394 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N + G+ + + IH A S GC Sbjct: 395 NATLK-----GQGYSSPV-SYWMPFNGGIGIHDANWRSVFGGEIYKTGGSHGCVNSPYDL 448 Query: 123 IDEIFAFVRDAFVG 136 +F + Sbjct: 449 AKTVFENIDAGTPV 462 >gi|28378135|ref|NP_785027.1| cell surface protein, ErfK family [Lactobacillus plantarum WCFS1] Length = 203 Score = 53.7 bits (128), Expect = 3e-06 Identities = 18/155 (11%), Positives = 39/155 (25%), Gaps = 42/155 (27%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K K + I++ +++++ L K Y ++ G Sbjct: 69 PYPKLAKY----DDINIQVSIKKQRVYL-KNHDQTLYTMLA----STGKHGSD------- 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------- 111 +P+G + +Q + + + H V Sbjct: 113 --TPKGHFEIQAERGQHFFNTQSGEGANY-----WVSFKDHGIYLFHSVPVDANDQYIVK 165 Query: 112 ----------SVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC +T A ++ + Sbjct: 166 EAQQLGKVANSHGCIRLTIADAKWLYENISTHTPV 200 >ErfK_YbiS_YhnG_Q97I32_158-280_PF03734.4 Length = 123 Score = 53.7 bits (128), Expect = 3e-06 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 16/125 (12%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ- 74 +I +E+++ ++ ++LI ++ + D + G + VQ Sbjct: 5 FIITSLKEQRVYVFNGDPH-NWKLINTFQCTSGAS---------DTPTITGRFYVQGKGL 54 Query: 75 --LNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAF 129 + +YY I + GA +S GC + I+ Sbjct: 55 AFKTSNDVICKYYTQIQGNYLFHSILFDKNGNVVDGTLGASLSHGCIRLAVQNAKYIYDT 114 Query: 130 VRDAF 134 + Sbjct: 115 LPMGT 119 >gi|15024797|gb|AAK79787.1| Fusion of predicted Zn-dependent amidase/peptidase (cell wall hydrolase/DD-carboxypeptidase family) and uncharacterized domain of ErfK family; peptodoglycan-binding domain [Clostridium acetobutylicum ATCC 824] Length = 281 Score = 53.7 bits (128), Expect = 3e-06 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 16/125 (12%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ- 74 +I +E+++ ++ ++LI ++ + D + G + VQ Sbjct: 162 FIITSLKEQRVYVFNGDPH-NWKLINTFQCTSGAS---------DTPTITGRFYVQGKGL 211 Query: 75 --LNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAF 129 + +YY I + GA +S GC + I+ Sbjct: 212 AFKTSNDVICKYYTQIQGNYLFHSILFDKNGNVVDGTLGASLSHGCIRLAVQNAKYIYDT 271 Query: 130 VRDAF 134 + Sbjct: 272 LPMGT 276 >gi|69926713|ref|ZP_00624184.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 269 Score = 53.3 bits (127), Expect = 3e-06 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 28/134 (20%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + + V I + K+ +++ + + +P+ + ++P Sbjct: 15 AAGSMAEAKVSILVDKDNQQMTV-----SVDGAERYQWPVSTGNP---------SHETPN 60 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYA 117 G + + N S+ + P + G IHG VS GC Sbjct: 61 GKFQTFRMEANHFSKEFD----DAPMPHSIFFTKVGH--AIHGTFSEGSLGVPVSHGCVR 114 Query: 118 MTDAQIDEIFAFVR 131 ++ A ++A V+ Sbjct: 115 LSRAHASTLYALVQ 128 >gi|37520540|ref|NP_923917.1| hypothetical protein glr0971 [Gloeobacter violaceus PCC 7421] Length = 435 Score = 53.3 bits (127), Expect = 3e-06 Identities = 15/141 (10%), Positives = 37/141 (26%), Gaps = 35/141 (24%) Query: 23 ERKLELWKAKMG----GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN----- 73 +R + ++ ++++++ + G + G + + Sbjct: 295 DRHIYIYLDTQKVAAVENGRVVRTFRVSTGKAGT---------PTVTGNFYIYDRYAIKT 345 Query: 74 ---QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAM----TD--- 120 + +P + + P A GY H G VS GC M + Sbjct: 346 MRSRADPGEPGH-YVVENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMATRRFNKRS 404 Query: 121 ---AQIDEIFAFVRDAFVGGQ 138 ++ + Sbjct: 405 GVSEDAGWLWKWAAMGVPVTV 425 >gi|62514270|ref|ZP_00385778.1| COG1376: Uncharacterized protein conserved in bacteria [Lactobacillus casei ATCC 334] Length = 234 Score = 53.3 bits (127), Expect = 4e-06 Identities = 21/155 (13%), Positives = 47/155 (30%), Gaps = 33/155 (21%) Query: 2 VSKELKQQLP----GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 + KQ P + + + +++++ + + + + + Sbjct: 94 TAPSEKQAYPDLTQHPNITLDVNLKKQRVFIKEGD-----KTLYTMYASTG--------- 139 Query: 58 EGDFQSPEGFYSVQPNQ----LNPD----SRYYLAI--NIGFP---NAYDRAHGYTGKYL 104 D +P G +++Q + NP+ + YY + + + D Y Sbjct: 140 -IDDSTPRGDFAIQDERGYEFFNPNEQMGAHYYTSFYLHGTYLFHTVPTDVGGQYIKNEA 198 Query: 105 MIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G S GC ++ A IF V Sbjct: 199 AKLGKEPGSHGCVRLSIADAKWIFEHVPTGTPVKV 233 >gi|10173425|dbj|BAB04530.1| BH0811 [Bacillus halodurans C-125] Length = 152 Score = 53.3 bits (127), Expect = 4e-06 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 13/76 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L + +++K YPI ++P G + + Sbjct: 56 PYRIDVSTNRRTLTL---RTQPAGEVVKVYPIAVGRI---------LHETPVGEFIIINK 103 Query: 74 QLNPDSRY-YLAINIG 88 NP + + +++ Sbjct: 104 APNPGGPFGTMWMSLS 119 >gi|39983561|gb|AAR34954.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sulfurreducens PCA] Length = 309 Score = 52.9 bits (126), Expect = 5e-06 Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 24/133 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ KE + + I + E+ + ++ L S P G Sbjct: 127 PLPKEYEPAKRYAKY-ILVSLTEQWIGAYER-----GTLKFSMPAATGKKG--------- 171 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG----YTGKYLMIH-----GACV 111 ++P G + + S Y + D A IH G Sbjct: 172 NETPTGLFRIDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPA 231 Query: 112 SVGCYAMTDAQID 124 S GC + D + Sbjct: 232 SHGCVGLFDEPMQ 244 >ErfK_YbiS_YhnG_Q74CU1_138-290_PF03734.4 Length = 153 Score = 52.5 bits (125), Expect = 6e-06 Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 23/118 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 YI + E+ + ++ L S P G ++P G + + Sbjct: 4 YILVSLTEQWIGAYER-----GTLKFSMPAATGKKG---------NETPTGLFRIDARDR 49 Query: 76 NPDSRYYLAINIGFPNAYDRAHG----YTGKYLMIH-----GACVSVGCYAMTDAQID 124 S Y + D A IH G S GC + D + Sbjct: 50 THTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFDEPMQ 107 >ErfK_YbiS_YhnG_Q6NFS1_231-358_PF03734.4 Length = 128 Score = 52.1 bits (124), Expect = 7e-06 Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 32/143 (22%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + ++K Q + S P+ + +P G Y++ Sbjct: 2 GDRVEAVADDATKTMVIYKN-----GQQVNSMPVSMGANKW---------PTPNGIYTIG 47 Query: 72 PNQLNPDS-----RYYLAIN-IGFPNAYDRAHGYTGKYLMIHGACVS----------VGC 115 NP Y LA N G+ A + + +H A S GC Sbjct: 48 DK--NPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGC 105 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 ++ +V+ + Sbjct: 106 INVSTDNAAWFQNYVKRGDIVRV 128 >gi|68160971|gb|AAY86917.1| lr1830 [Lactobacillus reuteri] Length = 218 Score = 52.1 bits (124), Expect = 7e-06 Identities = 15/159 (9%), Positives = 37/159 (23%), Gaps = 33/159 (20%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K +I++ + + L+ ++I + PK + Sbjct: 74 PYPDLNKV----KDFWIKVDLKNNRTYLYDGS-----KVIYTMYSTGGIYKKDPKTGKLK 124 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------- 111 +P G + Q + + L + ++ + H Sbjct: 125 SVTPTGTFYAQQERGDSFFNQSLKEGANYYVSW-----KNHGEYLFHSVPTKADGKYNEQ 179 Query: 112 ----------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC ++ + + Sbjct: 180 EAAKLGKTQGSHGCIRLSVPDAQWMEKNLPVGTKIEIVG 218 >gi|42524408|ref|NP_969788.1| hypothetical protein Bd3012 [Bdellovibrio bacteriovorus HD100] Length = 226 Score = 52.1 bits (124), Expect = 8e-06 Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 20/144 (13%) Query: 14 PVYIRIFK-----EERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR--REGDFQSPEG 66 P+ + K E + + + + ++ I + R+ +P G Sbjct: 66 PIVLVANKNAYGYEAQTMRVIQNGSHT-----HTWKISTGREQWETSKSGRQYFTTTPPG 120 Query: 67 F---YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 + YS+ N + + + ++ F + + G S GC + Sbjct: 121 WFYPYSIVRNHYSQTWQTNMEFSVFFNGGIALHAANSAHNYQL-GRRASGGCVRLHRDNA 179 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYP 147 I+ + G+ V V I P Sbjct: 180 KYIYERI---VQEGKGLVPV-IRP 199 >ErfK_YbiS_YhnG_P94399_65-193_PF03734.4 Length = 129 Score = 52.1 bits (124), Expect = 8e-06 Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 24/140 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 V+I + +E+K + + I + I D +P+G + V+ Sbjct: 1 QKHVWIDVNVKEQKAYIKEGSNT-----IYTMMISSGLDQT------KDDATPKGTFYVE 49 Query: 72 PNQ----LNPDSRYYLAINIGFPN---------AYDRAHGYTGKYLMIHGACVSVGCYAM 118 P + + + + + N + G VS GC + Sbjct: 50 PERGEWFFSEGYQEGAEYWVSWKNHGEFLFHSVPMTKDQKVIKTEAEKLGTKVSHGCIRL 109 Query: 119 TDAQIDEIFAFVRDAFVGGQ 138 T ++ + + Sbjct: 110 TIPDAKWVYENIPEHTKVVI 129 >ErfK_YbiS_YhnG_Q6NJ68_158-268_PF03734.4 Length = 111 Score = 52.1 bits (124), Expect = 9e-06 Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 22/121 (18%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 I +++ L + + PI G ++P+G + V + Sbjct: 8 IDLAQQRAWLQQDGRVVYGAV----PISSGRPGW---------ETPQGVFHVNRKVKDEI 54 Query: 79 SRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---VSVGCYAMTDAQIDEIFAFVRDAFV 135 SR + P Y +T + H +S GC + F ++ + Sbjct: 55 SREFN----NAPMPYSVY--FTNNGIAFHQDNPNVMSHGCIHLWHNDAVTFFNTLQYGDM 108 Query: 136 G 136 Sbjct: 109 V 109 >ErfK_YbiS_YhnG_Q88X41_76-202_PF03734.4 Length = 127 Score = 52.1 bits (124), Expect = 9e-06 Identities = 15/144 (10%), Positives = 36/144 (25%), Gaps = 38/144 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I++ +++++ L K Y ++ G +P+G + +Q Sbjct: 1 YDDINIQVSIKKQRVYL-KNHDQTLYTMLA----STGKHGSD---------TPKGHFEIQ 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------S 112 + + + H V S Sbjct: 47 AERGQHFFNTQSGEGANY-----WVSFKDHGIYLFHSVPVDANDQYIVKEAQQLGKVANS 101 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVG 136 GC +T A ++ + Sbjct: 102 HGCIRLTIADAKWLYENISTHTPV 125 >gi|54298630|ref|YP_124999.1| enhanced entry protein EnhA [Legionella pneumophila str. Paris] Length = 240 Score = 51.7 bits (123), Expect = 9e-06 Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 14/123 (11%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-LNPDSRYYLAINIGFPNA 92 + L+ PI S + ++ G + V + + S IG A Sbjct: 115 DAQGNLVWWGPISSGSDKCSDSNK--VCRTLTGIFRVFSKENVRCTSDV---FPIGRGGA 169 Query: 93 YDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEIF-AFVRDAF-VGGQPSVQVS 144 Y K +HG+ S GC M + FV + +V Sbjct: 170 KMPYCMYFHKGFALHGSDDIPGVRASHGCVRMFIQDAKWLNENFVELSSERNNFMGTKVI 229 Query: 145 IYP 147 + P Sbjct: 230 VRP 232 >ErfK_YbiS_YhnG_Q5YMV0_180-308_PF03734.4 Length = 129 Score = 51.7 bits (123), Expect = 9e-06 Identities = 18/117 (15%), Positives = 31/117 (26%), Gaps = 28/117 (23%) Query: 37 YQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN---PDSRYYLAINIGFPNAY 93 +++K+ P G ++P G Y V S Y + I P Y Sbjct: 22 GEVVKTMPTSLGKPG---------HETPNGTYIVGERHRQMVMDSSTYG--VPIDAPEGY 70 Query: 94 DR---AHGY-TGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVG 136 + + +H A S GC ++ F + Sbjct: 71 KLDVEYATRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKGDPV 127 >gi|13471264|ref|NP_102833.1| hypothetical protein mll1184 [Mesorhizobium loti MAFF303099] Length = 143 Score = 51.7 bits (123), Expect = 9e-06 Identities = 17/136 (12%), Positives = 37/136 (27%), Gaps = 33/136 (24%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 I + + + + + + G + +P G Y P Sbjct: 32 IDVSSQTMTV------RYGSEVYRWVVSTARPG---------YFTPRGTYR-------PQ 69 Query: 79 SRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFV 130 + + + + + IHG S GC + A +A V Sbjct: 70 RTARMWYSRKYDMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTANAATFYAMV 129 Query: 131 RDAFVGGQPSVQVSIY 146 R+ G + ++ + Sbjct: 130 RE---VGFGNTRIVVT 142 >gi|23007283|ref|ZP_00049221.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 64 Score = 51.7 bits (123), Expect = 1e-05 Identities = 7/43 (16%), Positives = 13/43 (30%), Gaps = 8/43 (18%) Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 IHG S GC +T+ ++ + + Sbjct: 19 YGIHGTPEPEKVGKTESHGCIRLTNWDARDLASRTQKGAKVEF 61 >ErfK_YbiS_YhnG_Q9KEP1_54-138_PF03734.4 Length = 85 Score = 51.7 bits (123), Expect = 1e-05 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 13/76 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L + +++K YPI ++P G + + Sbjct: 3 PYRIDVSTNRRTLTL---RTQPAGEVVKVYPIAVGRI---------LHETPVGEFIIINK 50 Query: 74 QLNPDSRY-YLAINIG 88 NP + + +++ Sbjct: 51 APNPGGPFGTMWMSLS 66 >ErfK_YbiS_YhnG_O86068_2-104_PF03734.4 Length = 103 Score = 51.7 bits (123), Expect = 1e-05 Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 27/119 (22%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYD 94 + + + G + +P G +S + + SR + NA Sbjct: 4 ENGFVKYRWKVSTARNG---------YVTPTGSWSAKWLSRDHSSR-------KYDNAPM 47 Query: 95 RAHGYTGKYLMIH--------GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + +H G S GC + E F+ R A G + +V I Sbjct: 48 PYAVFFNGGYAVHATFDLKRLGRPASHGCVRLHPDNAAEFFSLARQA---GLANTRVVI 103 >ErfK_YbiS_YhnG_Q7X2V6_85-220_PF03734.4 Length = 136 Score = 51.7 bits (123), Expect = 1e-05 Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 19/133 (14%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGF 67 + + + +L LW+ + +KSY I +G + +P Sbjct: 1 QPDIRLTLNVPTFRLTLWQN-----GKEVKSYYIGVGMKEHPLDIGAREAREIIWNPAWI 55 Query: 68 YSVQ--PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--------GACVSVGCYA 117 ++ S + N + G +IH G VS GC Sbjct: 56 PPPSDWVREMKGVSPGEVIKASDPRNPLGKLKIPLGDSYLIHQARGWSDVGNLVSHGCVR 115 Query: 118 MTDAQIDEIFAFV 130 M ++ ++ + Sbjct: 116 MPRPELYDLADKI 128 >gi|68175646|ref|ZP_00548886.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 464 Score = 51.7 bits (123), Expect = 1e-05 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 33/140 (23%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEGFY---SVQ 71 + +++++ + QL+++ P+ L GP G +SPE +V Sbjct: 278 VDSATHTMKVFR-----DGQLLRTMPVSLGRPSLPSMDGPHNVLG--KSPEVIMDSATVG 330 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDA 121 Q NPD Y A YT +H A S GC + A Sbjct: 331 IPQGNPDYYYEK---------VQWAVNYTSGGQYVHSAPWSVPSQGRANVSHGCVNASPA 381 Query: 122 QIDEIFAFVRDAFVGGQPSV 141 + F R + + Sbjct: 382 DAQWFYNFTRLGDIIDIVNT 401 >gi|3462874|gb|AAC34464.1| unknown [Rhizobium etli] Length = 106 Score = 51.7 bits (123), Expect = 1e-05 Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 27/120 (22%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYD 94 + + + G + +P G +S + + SR + NA Sbjct: 5 ENGFVKYRWKVSTARNG---------YVTPTGSWSAKWLSRDHSSR-------KYDNAPM 48 Query: 95 RAHGYTGKYLMIH--------GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 + +H G S GC + E F+ R A G + +V I Sbjct: 49 PYAVFFNGGYAVHATFDLKRLGRPASHGCVRLHPDNAAEFFSLARQA---GLANTRVVIT 105 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizob... 218 5e-56 gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor... 217 1e-55 gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Brady... 217 1e-55 DUF949_Q92JZ0_45-245_PF06104.2 216 3e-55 gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [M... 213 3e-54 gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmone... 212 4e-54 DUF949_Q83M88_30-229_PF06104.2 212 5e-54 DUF949_Q89XW3_52-252_PF06104.2 211 7e-54 gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodo... 211 1e-53 gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia c... 209 3e-53 gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melite... 208 8e-53 gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [M... 207 1e-52 gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Barto... 207 2e-52 gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefacien... 206 2e-52 gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitr... 206 3e-52 gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia p... 205 4e-52 DUF949_Q6D1H5_32-231_PF06104.2 205 5e-52 DUF949_Q8YJP4_41-241_PF06104.2 205 6e-52 gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesor... 205 6e-52 gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella qui... 205 7e-52 gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF94... 204 1e-51 DUF949_Q7CSY6_66-266_PF06104.2 204 1e-51 DUF949_Q98FX6_1-193_PF06104.2 203 2e-51 DUF949_Q66E07_28-227_PF06104.2 203 3e-51 DUF949_Q7CS68_57-257_PF06104.2 202 4e-51 gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefacien... 202 5e-51 DUF949_Q6G1P2_42-242_PF06104.2 200 2e-50 gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salm... 199 4e-50 DUF949_Q57JI8_39-239_PF06104.2 196 2e-49 DUF949_Q6G1H8_42-242_PF06104.2 196 3e-49 gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein ... 195 4e-49 gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photo... 194 8e-49 DUF949_Q7N7F5_31-231_PF06104.2 191 7e-48 gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein ... 173 3e-42 gi|75186790|ref|ZP_00700057.1| COG1376: Uncharacterized protein ... 154 1e-36 gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii] 154 1e-36 gi|49610290|emb|CAG73734.1| putative exported protein [Erwinia c... 149 4e-35 gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmo... 149 4e-35 gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmo... 148 1e-34 gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigel... 146 4e-34 gi|68515740|gb|EAN39455.1| Peptidoglycan-binding LysM:ErfK/YbiS/... 145 6e-34 gi|24375244|ref|NP_719287.1| LysM domain protein [Shewanella one... 144 1e-33 gi|69945495|ref|ZP_00636533.1| Peptidoglycan-binding LysM:ErfK/Y... 143 2e-33 gi|69950815|ref|ZP_00638633.1| Peptidoglycan-binding LysM:ErfK/Y... 141 1e-32 gi|68543641|ref|ZP_00583338.1| Peptidoglycan-binding LysM:ErfK/Y... 139 3e-32 gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Erwi... 138 6e-32 gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibri... 138 1e-31 gi|69926066|ref|ZP_00623537.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 136 4e-31 gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Pho... 136 4e-31 gi|75855745|ref|ZP_00763388.1| COG1376: Uncharacterized protein ... 135 6e-31 gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein ... 134 1e-30 gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 132 6e-30 gi|26247257|ref|NP_753297.1| Hypothetical protein ycfS precursor... 130 2e-29 gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein ... 130 2e-29 gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Brady... 130 2e-29 gi|15073711|emb|CAC45353.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 130 3e-29 gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 129 3e-29 gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Brady... 129 3e-29 gi|17989404|ref|NP_542037.1| PROTEIN YBIS PRECURSOR [Brucella me... 129 4e-29 gi|69929997|ref|ZP_00626874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 129 4e-29 gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yers... 128 6e-29 gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Brady... 128 8e-29 gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 128 8e-29 gi|54297427|ref|YP_123796.1| Legionella secretion system protein... 128 9e-29 gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Brady... 127 1e-28 gi|68189671|gb|EAN04335.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 127 2e-28 gi|13474433|ref|NP_106001.1| hypothetical protein mlr5313 [Mesor... 126 3e-28 gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesor... 126 3e-28 gi|15074524|emb|CAC46170.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [... 126 3e-28 gi|68192907|gb|EAN07560.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 126 4e-28 gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 126 4e-28 gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia end... 126 4e-28 gi|15155625|gb|AAK86477.1| AGR_C_1197p [Agrobacterium tumefacien... 126 4e-28 gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobiu... 125 5e-28 gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein ... 125 5e-28 gi|69926259|ref|ZP_00623730.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 125 6e-28 gi|17936219|ref|NP_533009.1| hypothetical protein Atu2336 [Agrob... 125 8e-28 gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 124 1e-27 gi|13471882|ref|NP_103449.1| probable carnitine operon oxidoredu... 124 1e-27 gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 124 2e-27 gi|68190685|gb|EAN05343.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 124 2e-27 ErfK_YbiS_YhnG_Q89DB0_182-313_PF03734.4 123 2e-27 gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesor... 123 2e-27 gi|12515680|gb|AAG56665.1| orf, hypothetical protein [Escherichi... 123 2e-27 ErfK_YbiS_YhnG_Q89E55_71-202_PF03734.4 123 3e-27 gi|75818411|ref|ZP_00748578.1| COG1376: Uncharacterized protein ... 123 3e-27 gi|15074019|emb|CAC45666.1| CONSERVED HYPOTHETICAL PROTEIN [Sino... 123 3e-27 gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmo... 123 3e-27 gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 123 3e-27 gi|46192901|ref|ZP_00005863.2| COG1376: Uncharacterized protein ... 123 3e-27 gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 123 4e-27 ErfK_YbiS_YhnG_Q8FX96_108-243_PF03734.4 123 4e-27 gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Bruce... 122 5e-27 gi|49239475|emb|CAF25827.1| hypothetical protein [Bartonella qui... 122 5e-27 gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Barto... 122 5e-27 ErfK_YbiS_YhnG_Q92KL8_110-245_PF03734.4 122 5e-27 gi|62289117|ref|YP_220910.1| lipoprotein, hypothetical [Brucella... 122 6e-27 gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 122 6e-27 ErfK_YbiS_YhnG_Q6NAN8_135-266_PF03734.4 121 9e-27 ErfK_YbiS_YhnG_Q6N3X7_92-223_PF03734.4 121 9e-27 gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photo... 121 1e-26 gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 121 1e-26 gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudo... 121 1e-26 gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Brady... 121 1e-26 ErfK_YbiS_YhnG_Q8UHL1_122-257_PF03734.4 121 1e-26 gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitros... 121 1e-26 gi|71282503|ref|YP_270846.1| LysM domain /ErfK/YbiS/YcfS/YnhG do... 121 1e-26 gi|56413653|ref|YP_150728.1| putative LysM domain [Salmonella en... 121 1e-26 gi|71548630|ref|ZP_00668854.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 121 2e-26 gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesor... 120 2e-26 gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 120 2e-26 ErfK_YbiS_YhnG_Q6N230_94-225_PF03734.4 120 2e-26 gi|66857904|ref|ZP_00401942.1| Peptidoglycan-binding LysM:ErfK/Y... 120 3e-26 ErfK_YbiS_YhnG_Q89VM1_60-191_PF03734.4 119 3e-26 gi|68190182|gb|EAN04842.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 119 3e-26 ErfK_YbiS_YhnG_Q92PX9_54-192_PF03734.4 119 3e-26 ErfK_YbiS_YhnG_Q89FR3_116-247_PF03734.4 119 4e-26 ErfK_YbiS_YhnG_Q89BG8_76-215_PF03734.4 119 4e-26 gi|15075086|emb|CAC46643.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [... 119 4e-26 gi|9392598|gb|AAF87210.1| unknown [Rhizobium leguminosarum bv. v... 119 5e-26 gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] 119 5e-26 gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Brady... 119 6e-26 ErfK_YbiS_YhnG_Q98C34_66-204_PF03734.4 118 6e-26 ErfK_YbiS_YhnG_Q92R37_35-174_PF03734.4 118 6e-26 ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 118 7e-26 gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesor... 118 8e-26 ErfK_YbiS_YhnG_Q6N0G6_60-191_PF03734.4 118 8e-26 gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 118 1e-25 gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovi... 118 1e-25 ErfK_YbiS_YhnG_Q987T4_107-242_PF03734.4 117 2e-25 gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 117 2e-25 ErfK_YbiS_YhnG_Q8UCZ2_64-202_PF03734.4 117 2e-25 ErfK_YbiS_YhnG_Q6N3T2_113-244_PF03734.4 117 2e-25 ErfK_YbiS_YhnG_Q89E58_121-252_PF03734.4 116 2e-25 gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 116 2e-25 ErfK_YbiS_YhnG_Q89UE9_98-229_PF03734.4 116 3e-25 gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein ... 116 3e-25 gi|68189621|gb|EAN04286.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 116 3e-25 gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 116 3e-25 gi|29654868|ref|NP_820560.1| LysM domain protein [Coxiella burne... 116 4e-25 gi|15155831|gb|AAK86651.1| AGR_C_1541p [Agrobacterium tumefacien... 116 4e-25 gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 116 4e-25 gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 116 4e-25 gi|15155832|gb|AAK86652.1| AGR_C_1542p [Agrobacterium tumefacien... 116 4e-25 gi|37676018|ref|NP_936414.1| uncharacterized protein conserved i... 116 4e-25 ErfK_YbiS_YhnG_Q6N9D2_60-191_PF03734.4 116 4e-25 gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pse... 116 5e-25 gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Cand... 116 5e-25 ErfK_YbiS_YhnG_Q6G2L0_77-216_PF03734.4 116 5e-25 gi|39936673|ref|NP_948949.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 115 5e-25 gi|67675669|ref|ZP_00472424.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 115 5e-25 gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesor... 115 5e-25 ErfK_YbiS_YhnG_Q8G317_66-204_PF03734.4 115 6e-25 gi|15073891|emb|CAC45532.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 115 7e-25 gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 114 1e-24 gi|69926541|ref|ZP_00624012.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 114 1e-24 gi|15072991|emb|CAC41450.1| CONSERVED HYPOTHETICAL PROTEIN [Sino... 114 1e-24 ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 114 1e-24 gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein ... 114 1e-24 gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 114 2e-24 ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 113 2e-24 gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Ery... 113 2e-24 gi|67153406|ref|ZP_00415151.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 113 2e-24 gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 113 3e-24 ErfK_YbiS_YhnG_Q985K6_93-234_PF03734.4 113 3e-24 ErfK_YbiS_YhnG_Q98JD1_93-231_PF03734.4 113 3e-24 gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 113 3e-24 gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseu... 113 3e-24 gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdello... 113 3e-24 gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein ... 113 4e-24 ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 112 4e-24 gi|22958594|ref|ZP_00006262.1| COG1376: Uncharacterized protein ... 112 5e-24 ErfK_YbiS_YhnG_Q92K56_83-221_PF03734.4 112 5e-24 ErfK_YbiS_YhnG_Q6N1G4_67-202_PF03734.4 112 5e-24 gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 112 5e-24 gi|71837344|ref|ZP_00677109.1| Peptidoglycan-binding LysM:ErfK/Y... 112 5e-24 gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein ... 112 6e-24 ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 112 7e-24 gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 112 7e-24 gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legio... 112 7e-24 gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [S... 111 7e-24 gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella f... 111 8e-24 gi|23346823|gb|AAN29007.1| lipoprotein, putative [Brucella suis ... 111 8e-24 gi|15073710|emb|CAC45352.1| PUTATIVE SIGNAL PEPTIDE PROTEIN [Sin... 111 8e-24 ErfK_YbiS_YhnG_Q57D03_90-229_PF03734.4 111 9e-24 gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct] 111 1e-23 gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas sy... 111 1e-23 gi|71836515|ref|ZP_00676284.1| Peptidoglycan-binding LysM:ErfK/Y... 111 1e-23 gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein ... 111 1e-23 gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 111 1e-23 ErfK_YbiS_YhnG_Q92KJ2_100-241_PF03734.4 111 1e-23 gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 111 1e-23 gi|23006269|ref|ZP_00048665.1| COG1376: Uncharacterized protein ... 111 2e-23 ErfK_YbiS_YhnG_Q8UH41_160-301_PF03734.4 110 2e-23 ErfK_YbiS_YhnG_Q9KIP0_82-225_PF03734.4 110 2e-23 gi|46192110|ref|ZP_00007275.2| COG1376: Uncharacterized protein ... 110 2e-23 gi|26989044|ref|NP_744469.1| hypothetical protein PP2320 [Pseudo... 110 2e-23 gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Brady... 110 2e-23 gi|16119419|ref|NP_396125.1| hypothetical protein AGR_pAT_272 [A... 110 2e-23 gi|71674300|ref|ZP_00672047.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 110 2e-23 ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 110 3e-23 gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdello... 110 3e-23 gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella a... 109 3e-23 gi|68190217|gb|EAN04877.1| Twin-arginine translocation pathway s... 109 3e-23 gi|37675934|ref|NP_936330.1| uncharacterized protein conserved i... 109 4e-23 ErfK_YbiS_YhnG_Q89WV4_37-169_PF03734.4 109 4e-23 gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesor... 109 4e-23 gi|69933021|ref|ZP_00628223.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 109 5e-23 gi|15141233|emb|CAC49746.1| conserved hypothetical protein [Sino... 109 5e-23 DUF949_Q60B45_95-280_PF06104.2 109 5e-23 gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein ... 109 5e-23 gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protei... 108 6e-23 gi|17933973|ref|NP_530763.1| hypothetical protein Atu0048 [Agrob... 108 7e-23 gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methy... 108 7e-23 ErfK_YbiS_YhnG_Q8CVY2_94-231_PF03734.4 108 7e-23 gi|53802376|ref|YP_112943.1| LysM domain protein [Methylococcus ... 108 8e-23 gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Brady... 108 8e-23 ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 108 8e-23 ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 108 8e-23 gi|17937039|ref|NP_533828.1| hypothetical protein Atu3331 [Agrob... 108 1e-22 gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia s... 108 1e-22 gi|13474192|ref|NP_105760.1| hypothetical protein mll5027 [Mesor... 108 1e-22 gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella b... 108 1e-22 gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibri... 108 1e-22 gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 108 1e-22 gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 108 1e-22 gi|68004185|ref|ZP_00536684.1| Peptidoglycan-binding LysM:ErfK/Y... 108 1e-22 ErfK_YbiS_YhnG_Q92KL9_66-205_PF03734.4 107 1e-22 gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulf... 107 1e-22 ErfK_YbiS_YhnG_Q8UAP2_82-223_PF03734.4 107 1e-22 ErfK_YbiS_YhnG_Q57FW6_102-240_PF03734.4 107 2e-22 gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Brady... 107 2e-22 gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella bur... 107 2e-22 gi|48730422|ref|ZP_00264169.1| COG1376: Uncharacterized protein ... 106 2e-22 ErfK_YbiS_YhnG_Q8UH40_114-255_PF03734.4 106 2e-22 gi|71674299|ref|ZP_00672046.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 106 3e-22 gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewan... 106 3e-22 gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 106 3e-22 gi|1742774|dbj|BAA15464.1| Probable carnitine operon oxidoreduct... 106 3e-22 ErfK_YbiS_YhnG_Q98CS5_116-254_PF03734.4 106 3e-22 ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 106 3e-22 gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 106 4e-22 ErfK_YbiS_YhnG_Q92TA3_134-276_PF03734.4 106 4e-22 gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein ... 106 5e-22 gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Brady... 106 5e-22 ErfK_YbiS_YhnG_Q5PG17_96-233_PF03734.4 106 5e-22 gi|23347356|gb|AAN29495.1| conserved hypothetical protein [Bruce... 106 5e-22 ErfK_YbiS_YhnG_Q98KE1_92-230_PF03734.4 106 5e-22 gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 106 5e-22 gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella d... 105 6e-22 gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 105 6e-22 gi|69927652|ref|ZP_00624813.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 105 6e-22 gi|23129994|ref|ZP_00111815.1| COG1376: Uncharacterized protein ... 105 7e-22 gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted p... 105 8e-22 gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax f... 105 9e-22 ErfK_YbiS_YhnG_Q6ND97_41-173_PF03734.4 104 1e-21 gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein ... 104 1e-21 gi|68003733|ref|ZP_00536279.1| ErfK/YbiS/YcfS/YnhG [Geobacter me... 104 1e-21 gi|15074222|emb|CAC45869.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 104 1e-21 ErfK_YbiS_YhnG_Q6D900_96-233_PF03734.4 104 1e-21 ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 104 1e-21 ErfK_YbiS_YhnG_Q57EH0_96-237_PF03734.4 104 2e-21 gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Baci... 104 2e-21 ErfK_YbiS_YhnG_Q8UKC7_90-231_PF03734.4 104 2e-21 gi|67916612|ref|ZP_00510315.1| ErfK/YbiS/YcfS/YnhG [Clostridium ... 104 2e-21 ErfK_YbiS_YhnG_Q8UJ84_117-259_PF03734.4 104 2e-21 gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120] 103 2e-21 gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Baci... 103 2e-21 gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibri... 103 2e-21 ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 103 3e-21 ErfK_YbiS_YhnG_Q82U48_98-240_PF03734.4 103 3e-21 ErfK_YbiS_YhnG_Q6D623_94-234_PF03734.4 103 3e-21 gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/Y... 103 3e-21 ErfK_YbiS_YhnG_Q89RZ1_67-201_PF03734.4 102 3e-21 gi|67928661|ref|ZP_00521848.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 102 3e-21 DUF949_Q6LJZ6_66-236_PF06104.2 102 4e-21 ErfK_YbiS_YhnG_Q989D5_60-195_PF03734.4 102 4e-21 gi|23127349|ref|ZP_00109222.1| COG1376: Uncharacterized protein ... 102 4e-21 gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Ta... 102 4e-21 ErfK_YbiS_YhnG_Q73D94_22-142_PF03734.4 102 5e-21 gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Brady... 102 5e-21 gi|75675776|ref|YP_318197.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter wi... 102 6e-21 gi|66856700|ref|ZP_00400762.1| Peptidoglycan-binding LysM:ErfK/Y... 102 6e-21 ErfK_YbiS_YhnG_Q8KR47_93-230_PF03734.4 102 7e-21 gi|68190214|gb|EAN04874.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 102 7e-21 ErfK_YbiS_YhnG_Q92TZ7_91-232_PF03734.4 102 7e-21 gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Baci... 102 7e-21 gi|17133905|dbj|BAB76467.1| all4768 [Nostoc sp. PCC 7120] 102 7e-21 gi|69930773|ref|ZP_00627470.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 101 8e-21 gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein ... 101 9e-21 gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Pho... 101 1e-20 ErfK_YbiS_YhnG_Q8Z5P0_93-230_PF03734.4 101 1e-20 gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Brady... 101 1e-20 ErfK_YbiS_YhnG_Q87G47_99-238_PF03734.4 100 2e-20 gi|68247205|gb|EAN29293.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp... 100 2e-20 gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Ba... 100 2e-20 gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Syn... 100 2e-20 ErfK_YbiS_YhnG_Q5ZV45_94-231_PF03734.4 100 3e-20 gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:Er... 100 3e-20 gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 99 3e-20 ErfK_YbiS_YhnG_Q8EAY9_93-230_PF03734.4 100 4e-20 gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulf... 100 4e-20 gi|39936101|ref|NP_948377.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomon... 100 4e-20 ErfK_YbiS_YhnG_Q8YS14_144-270_PF03734.4 99 5e-20 ErfK_YbiS_YhnG_Q8D0M4_96-235_PF03734.4 99 5e-20 ErfK_YbiS_YhnG_Q883T0_95-232_PF03734.4 99 6e-20 gi|69935211|ref|ZP_00630191.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 99 6e-20 gi|76165915|gb|EAO60044.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aur... 99 6e-20 ErfK_YbiS_YhnG_Q8Z7I2_99-240_PF03734.4 99 7e-20 gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein ... 98 1e-19 ErfK_YbiS_YhnG_Q89MH4_65-200_PF03734.4 98 1e-19 gi|69937362|ref|ZP_00632028.1| Twin-arginine translocation pathw... 98 1e-19 gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein ... 98 1e-19 gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Cl... 98 1e-19 gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] 98 1e-19 gi|22959005|ref|ZP_00006665.1| COG1376: Uncharacterized protein ... 98 1e-19 gi|15156344|gb|AAK87086.1| AGR_C_2380p [Agrobacterium tumefacien... 98 2e-19 gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan bi... 98 2e-19 ErfK_YbiS_YhnG_Q8YN05_54-169_PF03734.4 98 2e-19 gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus] 97 2e-19 gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Ba... 97 2e-19 gi|67938515|ref|ZP_00531039.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 97 3e-19 gi|68180217|ref|ZP_00553200.1| Twin-arginine translocation pathw... 97 3e-19 gi|15025432|gb|AAK80371.1| Uncharacterized protein, ErfK family;... 97 3e-19 ErfK_YbiS_YhnG_Q6LJB5_89-230_PF03734.4 96 4e-19 gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesor... 96 4e-19 ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 96 4e-19 gi|23006804|ref|ZP_00048959.1| COG1376: Uncharacterized protein ... 96 4e-19 ErfK_YbiS_YhnG_Q8D2K2_98-234_PF03734.4 96 4e-19 gi|75908663|ref|YP_322959.1| ErfK/YbiS/YcfS/YnhG [Anabaena varia... 96 4e-19 gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:Er... 96 4e-19 gi|69929707|ref|ZP_00626584.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 95 7e-19 ErfK_YbiS_YhnG_Q7MFG2_93-232_PF03734.4 95 8e-19 ErfK_YbiS_YhnG_Q55604_71-200_PF03734.4 95 8e-19 ErfK_YbiS_YhnG_Q818U5_25-151_PF03734.4 95 8e-19 ErfK_YbiS_YhnG_Q60AJ8_93-237_PF03734.4 95 8e-19 gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera... 95 9e-19 gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synec... 95 1e-18 ErfK_YbiS_YhnG_Q89CV1_74-185_PF03734.4 95 1e-18 ErfK_YbiS_YhnG_Q5LWA4_42-184_PF03734.4 95 1e-18 ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 95 1e-18 ErfK_YbiS_YhnG_Q88KH0_95-232_PF03734.4 95 1e-18 ErfK_YbiS_YhnG_Q9HZZ0_93-230_PF03734.4 95 1e-18 gi|17133907|dbj|BAB76469.1| all4770 [Nostoc sp. PCC 7120] 95 1e-18 gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdello... 95 1e-18 ErfK_YbiS_YhnG_Q7N3U7_93-232_PF03734.4 95 1e-18 ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 94 2e-18 gi|53688090|ref|ZP_00109223.2| COG1376: Uncharacterized protein ... 94 2e-18 ErfK_YbiS_YhnG_Q5N3Q0_79-206_PF03734.4 94 2e-18 gi|50085556|ref|YP_047066.1| conserved hypothetical protein; put... 94 3e-18 gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thio... 94 3e-18 gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted p... 93 3e-18 gi|69297918|ref|ZP_00620214.1| ErfK/YbiS/YcfS/YnhG [Silicibacter... 93 3e-18 ErfK_YbiS_YhnG_YAT5_56-188_PF03734.4 93 3e-18 gi|69299488|ref|ZP_00621475.1| Twin-arginine translocation pathw... 93 3e-18 gi|71676969|ref|ZP_00674708.1| ErfK/YbiS/YcfS/YnhG [Trichodesmiu... 93 3e-18 gi|56676740|gb|AAV93406.1| ErfK/YbiS/YcfS/YnhG family protein/Ta... 93 4e-18 gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acin... 93 4e-18 gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobac... 93 5e-18 gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacil... 93 6e-18 gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesor... 92 6e-18 ErfK_YbiS_YhnG_Q895S8_170-298_PF03734.4 92 7e-18 gi|69937273|ref|ZP_00631965.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 92 7e-18 ErfK_YbiS_YhnG_Q5WC42_54-163_PF03734.4 92 8e-18 gi|46191772|ref|ZP_00008016.2| COG1376: Uncharacterized protein ... 92 8e-18 ErfK_YbiS_YhnG_Q9KNA7_90-229_PF03734.4 92 9e-18 gi|62317131|ref|YP_222984.1| hypothetical protein BruAb2_0179 [B... 91 1e-17 gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodo... 91 1e-17 ErfK_YbiS_YhnG_Q5LWL8_74-207_PF03734.4 91 1e-17 gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbi... 91 1e-17 gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanth... 91 1e-17 gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermo... 91 1e-17 gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Ba... 91 1e-17 gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinor... 91 1e-17 gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Brady... 91 2e-17 gi|16331947|ref|NP_442675.1| hypothetical protein sll0670 [Synec... 91 2e-17 gi|67918178|ref|ZP_00511779.1| ErfK/YbiS/YcfS/YnhG [Chlorobium l... 91 2e-17 ErfK_YbiS_YhnG_Q9KCV4_26-152_PF03734.4 90 2e-17 gi|71363427|ref|ZP_00654071.1| ErfK/YbiS/YcfS/YnhG [Psychrobacte... 90 2e-17 gi|58580802|ref|YP_199818.1| hypothetical protein XOO1179 [Xanth... 90 3e-17 ErfK_YbiS_YhnG_Q97GF1_43-153_PF03734.4 90 3e-17 gi|46192269|ref|ZP_00007047.2| COG1376: Uncharacterized protein ... 90 3e-17 ErfK_YbiS_YhnG_Q8UFV4_31-142_PF03734.4 90 4e-17 gi|76164940|gb|EAO59080.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aur... 90 4e-17 gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylo... 90 4e-17 gi|61101139|ref|ZP_00376596.1| hypothetical protein ELI1837 [Ery... 90 4e-17 gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacil... 90 4e-17 gi|71364613|ref|ZP_00655198.1| ErfK/YbiS/YcfS/YnhG [Psychrobacte... 90 5e-17 ErfK_YbiS_YhnG_Q5KXE9_24-150_PF03734.4 89 5e-17 gi|71364962|ref|ZP_00655525.1| Peptidoglycan-binding domain 1:Er... 89 5e-17 gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psych... 89 5e-17 gi|53804847|ref|YP_113494.1| ErfK/YbiS/YcfS/YnhG family protein ... 89 5e-17 gi|68189539|gb|EAN04205.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 89 5e-17 ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 89 6e-17 ErfK_YbiS_YhnG_Q8X604_93-232_PF03734.4 89 6e-17 gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Baci... 89 6e-17 gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [B... 89 7e-17 ErfK_YbiS_YhnG_Q8YN03_53-168_PF03734.4 89 8e-17 gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [S... 89 8e-17 gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein ... 89 8e-17 gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clos... 88 9e-17 gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Azoar... 88 1e-16 ErfK_YbiS_YhnG_Q89MP2_90-201_PF03734.4 88 1e-16 gi|68270035|ref|ZP_00576285.1| Peptidoglycan-binding domain 1:Er... 88 1e-16 ErfK_YbiS_YhnG_Q5LRC4_82-215_PF03734.4 88 1e-16 gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacteriu... 88 1e-16 gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 88 1e-16 gi|29654687|ref|NP_820379.1| ErfK/YbiS/YcfS/YnhG family protein ... 88 1e-16 ErfK_YbiS_YhnG_Q60BQ3_102-241_PF03734.4 88 1e-16 gi|68552645|ref|ZP_00592032.1| ErfK/YbiS/YcfS/YnhG [Prosthecochl... 88 1e-16 ErfK_YbiS_YhnG_Q55969_52-167_PF03734.4 88 2e-16 gi|15025657|gb|AAK80578.1| Uncharacterized protein, ErfK family ... 88 2e-16 gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein ... 87 2e-16 ErfK_YbiS_YhnG_Q81XG3_27-152_PF03734.4 87 2e-16 ErfK_YbiS_YhnG_Q5P0G8_3-160_PF03734.4 87 2e-16 ErfK_YbiS_YhnG_Q8PB12_56-167_PF03734.4 87 2e-16 gi|48871054|ref|ZP_00323771.1| COG5295: Autotransporter adhesin ... 87 2e-16 gi|17936017|ref|NP_532807.1| hypothetical protein Atu2133 [Agrob... 87 2e-16 ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 87 2e-16 gi|27377359|ref|NP_768888.1| hypothetical protein blr2248 [Brady... 87 2e-16 gi|68263184|emb|CAI36672.1| putative lipoprotein [Corynebacteriu... 87 3e-16 gi|28377421|ref|NP_784313.1| hypothetical protein lp_0536 [Lacto... 87 3e-16 ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 87 3e-16 ErfK_YbiS_YhnG_Q98G98_358-493_PF03734.4 87 3e-16 ErfK_YbiS_YhnG_Q92KF1_25-137_PF03734.4 86 3e-16 ErfK_YbiS_YhnG_Q6N3B5_55-166_PF03734.4 86 4e-16 gi|62514272|ref|ZP_00385780.1| COG1376: Uncharacterized protein ... 86 4e-16 ErfK_YbiS_YhnG_Q83BD4_91-228_PF03734.4 86 4e-16 gi|67934041|ref|ZP_00527134.1| Peptidoglycan-binding domain 1:Er... 86 5e-16 gi|68195822|gb|EAN10258.1| ErfK/YbiS/YcfS/YnhG [Enterococcus fae... 86 5e-16 ErfK_YbiS_YhnG_Q6N5E1_100-211_PF03734.4 86 5e-16 gi|67934945|ref|ZP_00527970.1| ErfK/YbiS/YcfS/YnhG [Chlorobium p... 86 5e-16 ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 86 5e-16 ErfK_YbiS_YhnG_Q8P5X3_187-321_PF03734.4 86 5e-16 ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 86 5e-16 gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanth... 86 6e-16 ErfK_YbiS_YhnG_Q67P27_207-347_PF03734.4 86 6e-16 gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subt... 86 7e-16 ErfK_YbiS_YhnG_Q74GR2_117-256_PF03734.4 86 7e-16 gi|41326655|emb|CAF21137.1| secreted lipoprotein ErfK/YbiS/YcfS/... 85 7e-16 gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Proc... 85 8e-16 gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 85 8e-16 gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] 85 1e-15 DUF949_Q83XL8_75-191_PF06104.2 85 1e-15 gi|15075231|emb|CAC46787.1| HYPOTHETICAL PROTEIN [Sinorhizobium ... 85 1e-15 gi|71548935|ref|ZP_00669159.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas... 85 1e-15 gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family ... 85 1e-15 gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. ... 85 1e-15 ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 85 1e-15 ErfK_YbiS_YhnG_Q98PA3_31-163_PF03734.4 85 1e-15 gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methy... 85 1e-15 gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanth... 84 2e-15 gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitros... 84 2e-15 gi|7380643|emb|CAB85233.1| hypothetical protein [Neisseria menin... 84 2e-15 gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesor... 84 2e-15 gi|23465720|ref|NP_696323.1| hypothetical protein BL1154 [Bifido... 84 2e-15 gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohaloba... 84 2e-15 gi|4539222|emb|CAB39880.1| putative secreted protein [Streptomyc... 84 2e-15 gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquife... 84 3e-15 ErfK_YbiS_YhnG_Q83BU9_47-172_PF03734.4 83 3e-15 gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Aci... 83 3e-15 ErfK_YbiS_YhnG_Q89T02_56-167_PF03734.4 83 3e-15 ErfK_YbiS_YhnG_Q7V8E9_47-190_PF03734.4 83 3e-15 gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [B... 83 3e-15 ErfK_YbiS_YhnG_Q5WH69_27-153_PF03734.4 83 4e-15 gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clos... 83 4e-15 gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protei... 83 5e-15 ErfK_YbiS_YhnG_Q9I5J7_55-167_PF03734.4 83 5e-15 ErfK_YbiS_YhnG_Q899Q5_388-509_PF03734.4 83 5e-15 ErfK_YbiS_YhnG_Q92US7_190-325_PF03734.4 83 6e-15 ErfK_YbiS_YhnG_Q92K34_317-452_PF03734.4 83 6e-15 gi|29654445|ref|NP_820137.1| enhanced entry protein EnhA, putati... 83 6e-15 ErfK_YbiS_YhnG_Q606Y7_79-237_PF03734.4 82 7e-15 ErfK_YbiS_YhnG_Q8PH92_78-212_PF03734.4 82 7e-15 gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted p... 82 7e-15 ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 82 8e-15 ErfK_YbiS_YhnG_Q8UDJ2_335-470_PF03734.4 82 8e-15 ErfK_YbiS_YhnG_Q8XPD9_262-385_PF03734.4 82 9e-15 ErfK_YbiS_YhnG_Q89M18_213-348_PF03734.4 82 9e-15 gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobac... 81 1e-14 gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Noca... 81 1e-14 gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas ... 81 1e-14 ErfK_YbiS_YhnG_Q97FU5_105-228_PF03734.4 81 1e-14 gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Noca... 81 1e-14 ErfK_YbiS_YhnG_Q8FYK9_271-406_PF03734.4 81 1e-14 gi|68174074|ref|ZP_00547345.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 81 1e-14 gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromo... 81 1e-14 ErfK_YbiS_YhnG_Q5YU65_123-251_PF03734.4 81 2e-14 ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 81 2e-14 gi|68234377|ref|ZP_00573460.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 81 2e-14 gi|28379499|ref|NP_786391.1| cell surface protein, ErfK family [... 81 2e-14 ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 81 2e-14 gi|27383268|ref|NP_774797.1| hypothetical protein bll8157 [Brady... 81 2e-14 ErfK_YbiS_YhnG_Q8FMX7_240-368_PF03734.4 80 2e-14 ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 80 2e-14 gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methy... 80 3e-14 gi|40217343|emb|CAE09094.1| putative lipoprotein Lpps [Gordonia ... 80 3e-14 gi|68160971|gb|AAY86917.1| lr1830 [Lactobacillus reuteri] 80 3e-14 gi|46190626|ref|ZP_00206527.1| COG1376: Uncharacterized protein ... 80 3e-14 gi|54297296|ref|YP_123665.1| hypothetical protein lpp1341 [Legio... 80 3e-14 gi|61101279|ref|ZP_00376735.1| hypothetical protein ELI1976 [Ery... 79 4e-14 gi|28378135|ref|NP_785027.1| cell surface protein, ErfK family [... 79 4e-14 ErfK_YbiS_YhnG_Q9X811_245-373_PF03734.4 79 4e-14 gi|29653414|ref|NP_819106.1| enhanced entry protein EnhA, putati... 79 4e-14 gi|69930975|ref|ZP_00627615.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter ... 79 4e-14 gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [T... 79 4e-14 gi|15828436|ref|NP_302699.1| possible secreted protein [Mycobact... 79 5e-14 ErfK_YbiS_YhnG_Q5YMV0_180-308_PF03734.4 79 6e-14 gi|23464689|ref|NP_695292.1| protein similar to YcbI of B. subti... 79 6e-14 ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 79 6e-14 ErfK_YbiS_YhnG_Q83CJ3_126-250_PF03734.4 79 7e-14 ErfK_YbiS_YhnG_Q88T96_80-208_PF03734.4 79 7e-14 ErfK_YbiS_YhnG_Q9JT27_44-178_PF03734.4 79 7e-14 ErfK_YbiS_YhnG_Q88Z40_337-463_PF03734.4 79 8e-14 gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Proc... 79 9e-14 gi|28379551|ref|NP_786443.1| cell surface protein, ErfK family [... 79 9e-14 gi|48870290|ref|ZP_00323015.1| COG1376: Uncharacterized protein ... 78 9e-14 gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacil... 78 9e-14 gi|34497388|ref|NP_901603.1| hypothetical protein CV1933 [Chromo... 78 1e-13 ErfK_YbiS_YhnG_Q8NMT9_240-368_PF03734.4 78 1e-13 ErfK_YbiS_YhnG_Q88X41_76-202_PF03734.4 78 1e-13 gi|69937030|ref|ZP_00631751.1| ErfK/YbiS/YcfS/YnhG [Paracoccus d... 78 1e-13 gi|67929395|ref|ZP_00522577.1| ErfK/YbiS/YcfS/YnhG [Solibacter u... 78 1e-13 gi|71544473|ref|ZP_00665504.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 78 1e-13 gi|29654429|ref|NP_820121.1| enhanced entry protein EnhA, putati... 78 1e-13 ErfK_YbiS_YhnG_Q9ZBE6_121-249_PF03734.4 78 2e-13 gi|67987357|gb|EAM75155.1| ErfK/YbiS/YcfS/YnhG [Kineococcus radi... 78 2e-13 ErfK_YbiS_YhnG_Q89BJ1_28-145_PF03734.4 78 2e-13 gi|15023630|gb|AAK78723.1| Secreted protein containing uncharact... 78 2e-13 gi|48848818|ref|ZP_00303063.1| COG1376: Uncharacterized protein ... 77 2e-13 ErfK_YbiS_YhnG_Q98P76_240-375_PF03734.4 77 2e-13 gi|38234386|ref|NP_940153.1| Putative lipoprotein [Corynebacteri... 77 2e-13 gi|42524559|ref|NP_969939.1| hypothetical protein Bd3176 [Bdello... 77 2e-13 gi|16077404|ref|NP_388217.1| hypothetical protein BSU03350 [Baci... 77 3e-13 gi|71838162|ref|ZP_00677923.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 76 5e-13 gi|58337862|ref|YP_194447.1| putative cell surface protein [Lact... 76 5e-13 gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legio... 76 5e-13 ErfK_YbiS_YhnG_Q83CH7_105-238_PF03734.4 76 5e-13 gi|38233153|ref|NP_938920.1| Putative secreted protein [Coryneba... 76 5e-13 gi|54294224|ref|YP_126639.1| hypothetical protein lpl1289 [Legio... 76 6e-13 ErfK_YbiS_YhnG_Q83F95_122-247_PF03734.4 76 6e-13 gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protei... 76 6e-13 ErfK_YbiS_YhnG_Q88T44_91-218_PF03734.4 76 7e-13 gi|68234778|ref|ZP_00573839.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 76 7e-13 gi|54298630|ref|YP_124999.1| enhanced entry protein EnhA [Legion... 75 8e-13 gi|54023249|ref|YP_117491.1| hypothetical protein nfa12820 [Noca... 75 8e-13 gi|52857863|ref|ZP_00341701.1| COG1686: D-alanyl-D-alanine carbo... 75 8e-13 gi|71546161|ref|ZP_00667002.1| ErfK/YbiS/YcfS/YnhG [Syntrophobac... 75 9e-13 gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/Y... 75 9e-13 gi|13471264|ref|NP_102833.1| hypothetical protein mll1184 [Mesor... 75 1e-12 ErfK_YbiS_YhnG_O53638_121-249_PF03734.4 75 1e-12 ErfK_YbiS_YhnG_Q8G566_403-530_PF03734.4 75 1e-12 gi|52857829|ref|ZP_00341684.1| COG1376: Uncharacterized protein ... 75 1e-12 gi|71837791|ref|ZP_00677554.1| ErfK/YbiS/YcfS/YnhG [Pelobacter p... 75 1e-12 ErfK_YbiS_YhnG_Q5FIQ8_97-226_PF03734.4 75 1e-12 ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 75 1e-12 ErfK_YbiS_YhnG_Q8G821_57-179_PF03734.4 74 1e-12 ErfK_YbiS_YhnG_Q5X1P9_97-230_PF03734.4 74 1e-12 ErfK_YbiS_YhnG_Q60A53_318-451_PF03734.4 74 1e-12 ErfK_YbiS_YhnG_Q5ZVQ4_29-154_PF03734.4 74 2e-12 gi|15609655|ref|NP_217034.1| PROBABLE CONSERVED LIPOPROTEIN LPPS... 74 2e-12 ErfK_YbiS_YhnG_Q6N429_21-139_PF03734.4 74 2e-12 gi|15607258|ref|NP_214630.1| POSSIBLE CONSERVED MEMBRANE PROTEIN... 74 2e-12 gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Woli... 74 2e-12 gi|17427103|emb|CAD13623.1| CONSERVED HYPOTHETICAL PROTEIN [Rals... 74 3e-12 ErfK_YbiS_YhnG_Q7NWP8_32-170_PF03734.4 74 3e-12 ErfK_YbiS_YhnG_P94399_65-193_PF03734.4 73 3e-12 gi|33632702|emb|CAE07514.1| conserved hypothetical protein [Syne... 73 3e-12 gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein ... 73 3e-12 DUF949_Q83CG1_72-171_PF06104.2 73 3e-12 gi|23492403|dbj|BAC17377.1| hypothetical protein [Corynebacteriu... 73 3e-12 gi|29654387|ref|NP_820079.1| hypothetical protein CBU1080 [Coxie... 73 4e-12 ErfK_YbiS_YhnG_Q83CN1_2-158_PF03734.4 73 4e-12 gi|15827218|ref|NP_301481.1| putative membrane protein [Mycobact... 73 5e-12 gi|68232378|ref|ZP_00571527.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 73 5e-12 gi|32443240|emb|CAD72071.1| conserved hypothetical protein [Rhod... 73 5e-12 gi|68174957|ref|ZP_00548215.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 73 5e-12 ErfK_YbiS_YhnG_Q70K55_232-359_PF03734.4 73 5e-12 ErfK_YbiS_YhnG_Q5WX10_101-234_PF03734.4 73 6e-12 gi|67154504|ref|ZP_00416249.1| ErfK/YbiS/YcfS/YnhG [Azotobacter ... 72 6e-12 gi|48865171|ref|ZP_00319035.1| COG1376: Uncharacterized protein ... 72 7e-12 gi|29609712|dbj|BAC73761.1| putative lipoprotein [Streptomyces a... 72 7e-12 gi|2222712|emb|CAB09907.1| hypothetical protein MLCL383.33 [Myco... 72 7e-12 gi|41409618|ref|NP_962454.1| hypothetical protein MAP3520c [Myco... 72 7e-12 gi|48870588|ref|ZP_00323309.1| COG1376: Uncharacterized protein ... 72 7e-12 ErfK_YbiS_YhnG_Q5Z0B4_244-372_PF03734.4 72 8e-12 gi|37520540|ref|NP_923917.1| hypothetical protein glr0971 [Gloeo... 72 8e-12 gi|21323324|dbj|BAB97952.1| Uncharacterized BCR [Corynebacterium... 72 8e-12 gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protei... 72 8e-12 gi|3462874|gb|AAC34464.1| unknown [Rhizobium etli] 72 8e-12 gi|62514270|ref|ZP_00385778.1| COG1376: Uncharacterized protein ... 72 8e-12 ErfK_YbiS_YhnG_Q6NFS1_231-358_PF03734.4 72 8e-12 gi|68175646|ref|ZP_00548886.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. ... 72 8e-12 ErfK_YbiS_YhnG_Q97L19_343-463_PF03734.4 72 1e-11 gi|68191412|gb|EAN06068.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp... 72 1e-11 ErfK_YbiS_YhnG_O86068_2-104_PF03734.4 71 1e-11 ErfK_YbiS_YhnG_Q73U48_122-250_PF03734.4 71 1e-11 ErfK_YbiS_YhnG_Q7U7I3_35-179_PF03734.4 71 1e-11 ErfK_YbiS_YhnG_Q7V696_87-217_PF03734.4 71 1e-11 gi|68205981|ref|ZP_00558177.1| ErfK/YbiS/YcfS/YnhG [Desulfitobac... 71 1e-11 Sequences not found previously or not previously below threshold: >gi|15075707|emb|CAC47262.1| HYPOTHETICAL LIPOPROTEIN [Sinorhizobium meliloti] Length = 480 Score = 218 bits (557), Expect = 5e-56 Identities = 117/185 (63%), Positives = 144/185 (77%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY + P Sbjct: 57 SPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFYPLYP 116 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 NQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA RD Sbjct: 117 NQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFALARD 176 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+VC + Sbjct: 177 AFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNVCERK 236 Query: 193 YVFSK 197 YVF++ Sbjct: 237 YVFNQ 241 >gi|26246272|ref|NP_752311.1| Hypothetical protein yafK precursor [Escherichia coli CFT073] Length = 246 Score = 217 bits (554), Expect = 1e-55 Identities = 158/201 (78%), Positives = 172/201 (85%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 30 PVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMG-EQYQLLDSYKICKYSGGLGPKQRQGD 88 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 89 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 148 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 149 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 208 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 209 RKPPTVSVVNGRYVVSKPLSH 229 >gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110] Length = 526 Score = 217 bits (553), Expect = 1e-55 Identities = 107/203 (52%), Positives = 141/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKELKQQLPGS------PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PV +L + P+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGP Sbjct: 46 PVPPKLLAAMVEKDMDLQSPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGP 105 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S G Sbjct: 106 KVREGDRQAPEGFYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRG 165 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GY Sbjct: 166 CYAMTDEQIAEIYSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGY 225 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V C +YVF Sbjct: 226 DHFEVTRQEPKVDFCEKKYVFDA 248 >DUF949_Q92JZ0_45-245_PF06104.2 Length = 201 Score = 216 bits (550), Expect = 3e-55 Identities = 117/185 (63%), Positives = 144/185 (77%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 SP+ +RIFKEE LE+WKA +QL+KSY IC WSG LGPK +EGD Q+PEGFY + P Sbjct: 13 SPILLRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKMKEGDRQAPEGFYPLYP 72 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 NQ+NP+S YYLAIN G+PN YD+A+G TG +LMIHGAC S GCY+MT+ QI EIFA RD Sbjct: 73 NQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSAGCYSMTNEQIIEIFALARD 132 Query: 133 AFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 AF GGQ SVQ+ +PFRMT NM RHR++PN +FWK LK GYD FE T++PP V+VC + Sbjct: 133 AFKGGQESVQLQAFPFRMTAENMARHRDNPNIEFWKMLKAGYDQFEVTKRPPAVNVCERK 192 Query: 193 YVFSK 197 YVF++ Sbjct: 193 YVFNQ 197 >gi|68193357|gb|EAN08009.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 439 Score = 213 bits (542), Expect = 3e-54 Identities = 116/193 (60%), Positives = 147/193 (76%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K +P+ +R+FKEE LE+WK K G Y L+KSY ICKWSG LGPK EGD Q+P Sbjct: 53 KAKGMSTNAPIMMRVFKEEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAP 112 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+++P Q+NP+S Y+L+ NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q++ Sbjct: 113 EGFYTIRPQQMNPNSSYHLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVE 172 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ + Q +PFRMT NM R+RN PNY FW+ LK GYD+FE T+ PP Sbjct: 173 EIYAFARDAFRGGQEAFQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPP 232 Query: 185 TVSVCNGRYVFSK 197 V VC RYVF++ Sbjct: 233 KVDVCEARYVFNR 245 >gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica serovar Typhi Ty2] Length = 246 Score = 212 bits (541), Expect = 4e-54 Identities = 155/198 (78%), Positives = 168/198 (84%), Gaps = 1/198 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 KE KQQL GSPVYI+IFKEER L+L+ +YQL+ SY IC +SGGLGPKRR+GDF+S Sbjct: 33 KEYKQQLMGSPVYIQIFKEERTLDLYVKMG-EQYQLLDSYKICNYSGGLGPKRRQGDFKS 91 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFYSVQ NQL PDSR+Y AINIGFPNAYDRAHGY GKYLMIHGACVSVGCYAMTD+ I Sbjct: 92 PEGFYSVQRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGI 151 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 DEIF FV A V GQPSVQVSIYPFRMTDANMQRH+ S DFW QLKPGYDYFEQT KP Sbjct: 152 DEIFQFVTAALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKP 211 Query: 184 PTVSVCNGRYVFSKPLSH 201 PTVS+ +GRYV SKPLSH Sbjct: 212 PTVSIVDGRYVVSKPLSH 229 >DUF949_Q83M88_30-229_PF06104.2 Length = 200 Score = 212 bits (539), Expect = 5e-54 Identities = 158/201 (78%), Positives = 172/201 (85%), Gaps = 1/201 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PVSKE KQQL GSPVYI+IFKEER L+L+ +YQL+ SY ICK+SGGLGPK+R+GD Sbjct: 1 PVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMG-EQYQLLDSYKICKYSGGLGPKQRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 F+SPEGFYSVQ NQL PDSRYY AINIGFPNAYDRAHGY GKYLMIHG CVS+GCYAMT+ Sbjct: 60 FKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 IDEIF FV A V GQPSVQVSIYPFRMTDANM+RH+ S DFW+QLKPGYDYFEQT Sbjct: 120 QGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQT 179 Query: 181 RKPPTVSVCNGRYVFSKPLSH 201 RKPPTVSV NGRYV SKPLSH Sbjct: 180 RKPPTVSVANGRYVVSKPLSH 200 >DUF949_Q89XW3_52-252_PF06104.2 Length = 201 Score = 211 bits (538), Expect = 7e-54 Identities = 106/191 (55%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K SP+ +R+FK+E +LE+WK G++ L+K+YPIC+WSG LGPK REGD Q+PEG Sbjct: 7 KDMDLQSPILVRLFKQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDRQAPEG 66 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FYS+ P Q+NP S YYL+ N G+PNA+D+A G TG LM+HG C S GCYAMTD QI EI Sbjct: 67 FYSINPGQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEI 126 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 ++ R++F GGQ + Q+ YPF+MT NM +HRN+PN FWK +K GYD+FE TR+ P V Sbjct: 127 YSLGRESFFGGQKAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKV 186 Query: 187 SVCNGRYVFSK 197 C +YVF Sbjct: 187 DFCEKKYVFDA 197 >gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009] Length = 491 Score = 211 bits (537), Expect = 1e-53 Identities = 110/203 (54%), Positives = 141/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKELKQQLPGS------PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PVS +L + P+ +R+FK+E +LE+WK G +QL+KSYPIC+WSG LGP Sbjct: 54 PVSPKLVAAMQEKNMDLQSPILVRLFKQEAELEVWKQDRTGVFQLLKSYPICRWSGDLGP 113 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S G Sbjct: 114 KIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRG 173 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q+ YPF+MT N +HRN+PN FWK LK GY Sbjct: 174 CYAMTDEQIAEIYALGRESFFGGQRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGY 233 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V C +YVF Sbjct: 234 DHFEVTRQEPKVDFCEHKYVFDA 256 >gi|49612920|emb|CAG76370.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 244 Score = 209 bits (533), Expect = 3e-53 Identities = 122/199 (61%), Positives = 152/199 (76%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ Y+L++ YPICK+SGGLGPKR EGD Sbjct: 32 PIAKELKQQLLGSPIYIQIFKEERIFELYAKVGNE-YRLLEQYPICKYSGGLGPKRVEGD 90 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 91 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 150 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 151 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 210 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 211 NQPPAITVFNGQYVVNPPL 229 >gi|17981907|gb|AAL51220.1| hypothetical protein [Brucella melitensis 16M] Length = 403 Score = 208 bits (529), Expect = 8e-53 Identities = 123/204 (60%), Positives = 147/204 (72%), Gaps = 6/204 (2%) Query: 1 PVSK------ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ + + K SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGP Sbjct: 35 PLPQKIVAKMQAKGMPRTSPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGP 94 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K EGD Q+PEGFY+V+P Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S G Sbjct: 95 KYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSG 154 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+MTD Q+ EI+AF RDAF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GY Sbjct: 155 CYSMTDEQVAEIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGY 214 Query: 175 DYFEQTRKPPTVSVCNGRYVFSKP 198 D FE T+ PP V VC RYVF+ P Sbjct: 215 DAFETTKVPPKVDVCEKRYVFNVP 238 >gi|68190218|gb|EAN04878.1| protein of unknown function DUF949 [Mesorhizobium sp. BNC1] Length = 335 Score = 207 bits (528), Expect = 1e-52 Identities = 105/191 (54%), Positives = 138/191 (72%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 K P +PV +RIFK+E +LE+WK G++ L+K+YP+C+WSG LGPK++ GD Q+PEG Sbjct: 47 KSMSPSAPVLVRIFKQESELEVWKRDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEG 106 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEI 126 FY V LNP+S+YYL+ N+G+PN + A GYTG+ LM+HGAC S GC+A+TD + EI Sbjct: 107 FYHVSARMLNPNSQYYLSFNLGYPNRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEI 166 Query: 127 FAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTV 186 +A R+A GGQ S QV +PFRMT NM ++RN PN+ FW LK GYD FE TR+ P V Sbjct: 167 YAVAREALKGGQGSFQVQAFPFRMTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKV 226 Query: 187 SVCNGRYVFSK 197 S C GRYVF + Sbjct: 227 SYCEGRYVFDR 237 >gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] Length = 247 Score = 207 bits (526), Expect = 2e-52 Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 6/202 (2%) Query: 1 PVSKELKQQL------PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ ++ P +P+ +R FKEE E+WK G + LI Y ICKWSG LGP Sbjct: 36 PLPREVQNRMVLYNVDPYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGDFQ+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S G Sbjct: 96 KYKEGDFQTPEGFYTISASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CY+M+D + +I+AF RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GY Sbjct: 156 CYSMSDKNMAQIYAFARDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D FE+ RKPPTV V RYVF+ Sbjct: 216 DLFEKNRKPPTVDVYEKRYVFN 237 >gi|15160040|gb|AAK90059.1| AGR_L_2977p [Agrobacterium tumefaciens str. C58] Length = 351 Score = 206 bits (525), Expect = 2e-52 Identities = 110/191 (57%), Positives = 135/191 (70%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+PE Sbjct: 62 AKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAPE 121 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ E Sbjct: 122 GFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGE 181 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 182 IYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQPK 241 Query: 186 VSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 242 VSVCGRRYVFN 252 >gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255] Length = 492 Score = 206 bits (524), Expect = 3e-52 Identities = 110/203 (54%), Positives = 142/203 (69%), Gaps = 6/203 (2%) Query: 1 PVSKE------LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PVS + K SP+ IR+FK+E +LE+WK G++ L+KSYPIC+WSG LGP Sbjct: 41 PVSPKLVAAMTAKDMELQSPILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGP 100 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PN +D++ G TG LM+HG C S G Sbjct: 101 KTREGDRQAPEGFYSITPAQMNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRG 160 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q+ YPFRMT AN+ +HRN+PN FWK +K G Sbjct: 161 CYAMTDEQIAEIYAVGRESFFGGQRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGN 220 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE TR+ P V+ C +YVF Sbjct: 221 DHFEVTRQEPKVAFCERKYVFDP 243 >gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Medievalis str. 91001] Length = 250 Score = 205 bits (523), Expect = 4e-52 Identities = 136/197 (69%), Positives = 163/197 (82%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 33 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 91 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFY + L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 92 KSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 151 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ N+QRHRNS +FW+QL+PGY YF + R Sbjct: 152 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNR 211 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 212 MPPPVSVSNGQYVLSPP 228 >DUF949_Q6D1H5_32-231_PF06104.2 Length = 200 Score = 205 bits (522), Expect = 5e-52 Identities = 122/199 (61%), Positives = 152/199 (76%), Gaps = 1/199 (0%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P++KELKQQL GSP+YI+IFKEER EL+ Y+L++ YPICK+SGGLGPKR EGD Sbjct: 1 PIAKELKQQLLGSPIYIQIFKEERIFELYAKVGNE-YRLLEQYPICKYSGGLGPKRVEGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY V QL PDS+YY AINIGFPN YD++ GY+G+YLMIHG CVSVGCYAMT+ Sbjct: 60 LKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTN 119 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 +DEI+ + A GQ + ++IYPFRMT+ NMQRHR+S FWKQL+PGY YF Q Sbjct: 120 NYMDEIYRYADAALRHGQAKIDIAIYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQH 179 Query: 181 RKPPTVSVCNGRYVFSKPL 199 +PP ++V NG+YV + PL Sbjct: 180 NQPPAITVFNGQYVVNPPL 198 >DUF949_Q8YJP4_41-241_PF06104.2 Length = 201 Score = 205 bits (522), Expect = 6e-52 Identities = 122/194 (62%), Positives = 144/194 (74%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + K SP+ +RIFKEE LE+WK K G+Y I SY ICKWSG LGPK EGD Q+P Sbjct: 5 QAKGMPRTSPILVRIFKEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAP 64 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQID 124 EGFY+V+P Q+NP S YYLA NIGFPNAYDRA+G TG++LM+HGAC S GCY+MTD Q+ Sbjct: 65 EGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVA 124 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPP 184 EI+AF RDAF GGQ Q+ +PFRMT ANM R++N PNY FWK LK GYD FE T+ PP Sbjct: 125 EIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPP 184 Query: 185 TVSVCNGRYVFSKP 198 V VC RYVF+ P Sbjct: 185 KVDVCEKRYVFNVP 198 >gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099] Length = 395 Score = 205 bits (522), Expect = 6e-52 Identities = 120/180 (66%), Positives = 143/180 (79%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P+Q+NP Sbjct: 10 RIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNP 69 Query: 78 DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RDAF GG Sbjct: 70 RSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG 129 Query: 138 QPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVFSK 197 Q QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC RYVF++ Sbjct: 130 QTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKRYVFNQ 189 >gi|49240300|emb|CAF26782.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 247 Score = 205 bits (521), Expect = 7e-52 Identities = 110/202 (54%), Positives = 140/202 (69%), Gaps = 6/202 (2%) Query: 1 PVSKELKQ------QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P+ +E++ P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGP Sbjct: 36 PLPQEVQNKMVLHNIDPYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGP 95 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K +EGD Q+PEGFY++ +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVG Sbjct: 96 KYKEGDLQTPEGFYTISADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVG 155 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAM D + +I+AF RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GY Sbjct: 156 CYAMGDKNMAQIYAFARDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGY 215 Query: 175 DYFEQTRKPPTVSVCNGRYVFS 196 D+FE+ RKPPTV V RYVFS Sbjct: 216 DFFEENRKPPTVDVYKKRYVFS 237 >gi|69927901|ref|ZP_00625062.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14] Length = 502 Score = 204 bits (519), Expect = 1e-51 Identities = 105/203 (51%), Positives = 137/203 (67%), Gaps = 6/203 (2%) Query: 1 PVSKELKQQLPGS------PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 PV +L + P+ IR+FK+E +LE+WK G++ L+K+YPIC+WSG LGP Sbjct: 56 PVPPKLVAAMTEKDMELQSPILIRLFKQEAELEVWKQNRSGKFALLKTYPICRWSGDLGP 115 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 K REGD Q+PEGFYS+ P Q+NP S YYL+ N G+PNA+D++ G TG LM+HG C S G Sbjct: 116 KTREGDRQAPEGFYSISPAQMNPRSAYYLSFNTGYPNAFDKSLGRTGSELMVHGDCSSRG 175 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGY 174 CYAMTD QI EI+A R++F GGQ + Q YPF MT N+ +HRN+PN FWK +K G Sbjct: 176 CYAMTDEQIAEIYALGRESFFGGQHAFQFQAYPFHMTPVNLAKHRNNPNMPFWKMIKEGS 235 Query: 175 DYFEQTRKPPTVSVCNGRYVFSK 197 D+FE T + P V C +YVF Sbjct: 236 DHFEVTHQAPKVEFCEHKYVFDP 258 >DUF949_Q7CSY6_66-266_PF06104.2 Length = 201 Score = 204 bits (519), Expect = 1e-51 Identities = 114/192 (59%), Positives = 139/192 (72%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PE Sbjct: 6 KKGMDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPE 65 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFY++ P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI E Sbjct: 66 GFYNLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILE 125 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+ F RDAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP Sbjct: 126 IYGFARDAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPD 185 Query: 186 VSVCNGRYVFSK 197 V+VC +YVF++ Sbjct: 186 VNVCEKKYVFNQ 197 >DUF949_Q98FX6_1-193_PF06104.2 Length = 193 Score = 203 bits (516), Expect = 2e-51 Identities = 120/180 (66%), Positives = 143/180 (79%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 RIFKEE KLE+WKAK G Y ++ SY ICKWSG LGPK EGD Q+PEGFY+V+P+Q+NP Sbjct: 10 RIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNP 69 Query: 78 DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGG 137 S Y+L+ NIGFPNAYDRA+G TG+ LM+HGAC S GCY+MTDAQI++I+AF RDAF GG Sbjct: 70 RSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG 129 Query: 138 QPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVFSK 197 Q QV +PFRMT ANM R+RN PNY+FWK LK GYD FE T+ PP V VC RYVF++ Sbjct: 130 QTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKRYVFNQ 189 >DUF949_Q66E07_28-227_PF06104.2 Length = 200 Score = 203 bits (516), Expect = 3e-51 Identities = 138/197 (70%), Positives = 164/197 (83%), Gaps = 1/197 (0%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VSKELKQQL GS VYI+IFKEER LEL+ AK+ GEY+L++SYPIC++SGGLGPKRREGDF Sbjct: 2 VSKELKQQLLGSSVYIQIFKEERVLELY-AKLQGEYRLVQSYPICEFSGGLGPKRREGDF 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +SPEGFYS+ L PDS++Y AINIGFPN YD++ GY+GKYLMIHGAC S+GCYAMTDA Sbjct: 61 KSPEGFYSINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 120 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTR 181 +DEIF +VR AF+ GQ V +SIYPFRMT+ NMQRHRNS +FW+QL+PGY YF + R Sbjct: 121 YMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNR 180 Query: 182 KPPTVSVCNGRYVFSKP 198 PP VSV NG+YV S P Sbjct: 181 MPPPVSVSNGQYVLSPP 197 >DUF949_Q7CS68_57-257_PF06104.2 Length = 201 Score = 202 bits (514), Expect = 4e-51 Identities = 110/191 (57%), Positives = 135/191 (70%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K P SPV +RIFK+E +LE+WK G Y L+K+YP+C+WSG LGPK + GD Q+PE Sbjct: 6 AKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAPE 65 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFY V LNP+S+YY++ N+G+PN + A GYTG+ LM+HGAC S GCYAMTD Q+ E Sbjct: 66 GFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGE 125 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+A V A GGQ QV YPFRM+ NM HR+ PN FWK LK GYDYFE TR+ P Sbjct: 126 IYAIVARALQGGQDRFQVQAYPFRMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQPK 185 Query: 186 VSVCNGRYVFS 196 VSVC RYVF+ Sbjct: 186 VSVCGRRYVFN 196 >gi|15159690|gb|AAK89766.1| AGR_L_2392p [Agrobacterium tumefaciens str. C58] Length = 452 Score = 202 bits (514), Expect = 5e-51 Identities = 114/192 (59%), Positives = 139/192 (72%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 K SP+ IRIFKEE LE+WKA+ ++ I Y IC WSG LGPK +EGD Q+PE Sbjct: 71 KKGMDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPE 130 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 GFY++ P LNP+S+YYLAIN GFPN YD A+G G LMIHGAC S GCY+MTDAQI E Sbjct: 131 GFYNLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILE 190 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 I+ F RDAF GGQ +VQ+ +PFRMT NM RHR S + +FWK LK GYD FE T++PP Sbjct: 191 IYGFARDAFKGGQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPD 250 Query: 186 VSVCNGRYVFSK 197 V+VC +YVF++ Sbjct: 251 VNVCEKKYVFNQ 262 >DUF949_Q6G1P2_42-242_PF06104.2 Length = 201 Score = 200 bits (509), Expect = 2e-50 Identities = 109/186 (58%), Positives = 136/186 (73%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + LI Y ICKWSG LGPK +EGDFQ+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+AHG TG LM+HG+C S GCY+M+D + +I+AF Sbjct: 71 SASQMNPYSKYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMTDANM RH + P+Y FW LK GYD FE+ RKPPTV V Sbjct: 131 RDAFRGGQRKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYE 190 Query: 191 GRYVFS 196 RYVF+ Sbjct: 191 KRYVFN 196 >gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella typhimurium LT2] Length = 239 Score = 199 bits (506), Expect = 4e-50 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 39 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 98 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 99 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 158 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 159 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 218 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 219 RRLPTITVENRRYKISP 235 >DUF949_Q57JI8_39-239_PF06104.2 Length = 201 Score = 196 bits (499), Expect = 2e-49 Identities = 111/197 (56%), Positives = 141/197 (71%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 PV+ LK PG ++IRI K E KLELW + Y+L K++ IC WSGGLGPK ++GD Sbjct: 1 PVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGD 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 +SPEGFY+ LNP+SRY+LA NIG+PNAYDRA+GYTG ++M+HG CVS GCYAMTD Sbjct: 61 GKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTD 120 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQT 180 A I+EI+ V A GQ SV V I+PF M D NM++ + P Y+FW+ LKPGYDYFE+ Sbjct: 121 AGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKN 180 Query: 181 RKPPTVSVCNGRYVFSK 197 R+ PT++V N RY S Sbjct: 181 RRLPTITVENRRYKISP 197 >DUF949_Q6G1H8_42-242_PF06104.2 Length = 201 Score = 196 bits (498), Expect = 3e-49 Identities = 108/186 (58%), Positives = 134/186 (72%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P +P+ +R FKEE E+WK G + L+ Y ICKWSG LGPK +EGD Q+PEGFY++ Sbjct: 11 PYAPIMMRFFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTI 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 +Q+NP S+YYL+ NIGFPN YD+ HG TG LM+HG+C SVGCYAM D + +I+AF Sbjct: 71 SADQMNPYSKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFA 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 RDAF GGQ Q+ +PFRMT+ANM RH P+Y FW LK GYD+FE+ RKPPTV V Sbjct: 131 RDAFRGGQKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYK 190 Query: 191 GRYVFS 196 RYVFS Sbjct: 191 KRYVFS 196 >gi|48861312|ref|ZP_00315215.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 238 Score = 195 bits (497), Expect = 4e-49 Identities = 102/195 (52%), Positives = 137/195 (70%), Gaps = 1/195 (0%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 E + G+P++IRIFK+ LE+W G ++L K+Y IC SG LGPK R GD Q+ Sbjct: 45 SEKGLRY-GAPIFIRIFKQSATLEVWLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQA 103 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQI 123 PEGFY V + NP S+++L+ N+G+PNAYDRAHG TG LM+HG CVS+GCYAMTD+ I Sbjct: 104 PEGFYFVNAQRFNPWSKFHLSFNLGYPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGI 163 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 +EI+A + + GQP +V I+PFR++D ++R +N+ Y FW LK G+DYFEQT+ P Sbjct: 164 EEIYALAQKSLEDGQPFFRVHIFPFRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMP 223 Query: 184 PTVSVCNGRYVFSKP 198 P V+V N RYVFS P Sbjct: 224 PNVNVQNKRYVFSAP 238 >gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 194 bits (494), Expect = 8e-49 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 41 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 101 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 160 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 161 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 220 Query: 191 GRYVFSK 197 G+YV + Sbjct: 221 GQYVVNA 227 >DUF949_Q7N7F5_31-231_PF06104.2 Length = 201 Score = 191 bits (487), Expect = 7e-48 Identities = 114/187 (60%), Positives = 142/187 (75%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PGSPV+I+IFKEER LEL+ G YQL KSYPIC +SGGLGPK EGD +SPEGFY V Sbjct: 11 PGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRV 70 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + +QLNP+SRYY +IN+GFPN YD+ GY+G YLMIHG C SVGCYAMT+ +DEI+ +V Sbjct: 71 KTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYV 130 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCN 190 A + GQ + +SIYPFRMT NM RHR+S +Y FW QL+P Y+YF + +P TVS+ N Sbjct: 131 ESALLRGQYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIIN 190 Query: 191 GRYVFSK 197 G+YV + Sbjct: 191 GQYVVNA 197 >gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 173 bits (438), Expect = 3e-42 Identities = 90/167 (53%), Positives = 121/167 (72%) Query: 29 WKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIG 88 ++A+ G Y L+K+YPI +WS LGPK ++GD Q+PEGFY++ P Q+NP+S YYL+ ++G Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62 Query: 89 FPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPF 148 +PNA DRA G TG Y+M+HG C S GC+AMTDA + EI+A R+AF GGQ + Q YPF Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNGGQRAFQFQSYPF 122 Query: 149 RMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYVF 195 RMT AN+ + RN PN FW+ LK G DYFE ++ P V+ C +YVF Sbjct: 123 RMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169 >gi|75186790|ref|ZP_00700057.1| COG1376: Uncharacterized protein conserved in bacteria [Escherichia coli E24377A] Length = 311 Score = 154 bits (390), Expect = 1e-36 Identities = 31/196 (15%), Positives = 51/196 (26%), Gaps = 29/196 (14%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----RE 58 + LP + I + E +L + ++ +PI G R E Sbjct: 86 PQQLILPATVRKGIVVNVAEMRLYYYPPDSNT----VEVFPIGIGQAGRETPRNWVTTVE 141 Query: 59 GDFQSPEGFYSVQPNQL--NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----- 111 ++P + + + G N Y G+ IHG Sbjct: 142 RKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIG 201 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 S GC + + I +F V V S + + Sbjct: 202 LRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYT---------TEPDGSNWLEVHE 252 Query: 169 QLKPGYDYFEQTRKPP 184 L +E RK P Sbjct: 253 PLSRNRAEYESDRKVP 268 >gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii] Length = 299 Score = 154 bits (389), Expect = 1e-36 Identities = 35/196 (17%), Positives = 51/196 (26%), Gaps = 29/196 (14%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----RE 58 + LP + I + E +L + L PI G R E Sbjct: 85 PQQLILPDTVREGIIVNAAEMRLYYYPPGSNTVEVL----PIGIGQAGRETPRNWVTAVE 140 Query: 59 GDFQSPEGFYSVQPNQLN--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------ 110 + P + + + G N Y G+ IHG Sbjct: 141 RKQEGPTWSPTPNTRRAYAAEGKTLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNSNFGIG 200 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 VS GC + + I +F V V + S + + Sbjct: 201 LRVSQGCIRLRNNDIKYLFDNVPVGTRVQLIDQPVKVT---------TEPDGSRWVEVHE 251 Query: 169 QLKPGYDYFEQTRKPP 184 L FE TRK P Sbjct: 252 PLSRNRAEFESTRKVP 267 >gi|49610290|emb|CAG73734.1| putative exported protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 365 Score = 149 bits (376), Expect = 4e-35 Identities = 30/194 (15%), Positives = 45/194 (23%), Gaps = 29/194 (14%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGD 60 + LP +P I I E +L + + + PI G + Sbjct: 90 QLILPDAPREGIVINSAEMRLYYYPKGS----KTVVVLPIGIGELGKDTPINWTTSVQRK 145 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYLMIHGACV------- 111 P + + + L G N Y G IHG Sbjct: 146 KAGPTWTPTAKMHAEYAARGETLQKVFPAGPDNPMGLYALYIGNLYAIHGTNANFGIGLR 205 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQL 170 S GC + I +F V + V S + L Sbjct: 206 VSHGCVRLRADDIKYLFNSVPVGTRVQFINEPVKAT---------VEPDGSRYVEVHNPL 256 Query: 171 KPGYDYFEQTRKPP 184 + F P Sbjct: 257 SRTVEEFHSDSPAP 270 >gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 309 Score = 149 bits (376), Expect = 4e-35 Identities = 34/196 (17%), Positives = 49/196 (25%), Gaps = 29/196 (14%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----RE 58 + LP + I + E +L + A L PI G R E Sbjct: 85 PQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL----PIGIGQAGRETPRNWVTAVE 140 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYLMIHGACV----- 111 P + + L + G N Y G+ IHG Sbjct: 141 RKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIG 200 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 S GC + + I +F V V S + + Sbjct: 201 LRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKF---------SVEPDGSRWLEVHE 251 Query: 169 QLKPGYDYFEQTRKPP 184 L FE +K P Sbjct: 252 PLSRNRAEFESDKKVP 267 >gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 306 Score = 148 bits (373), Expect = 1e-34 Identities = 31/196 (15%), Positives = 45/196 (22%), Gaps = 29/196 (14%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRRE 58 + LP + I I E +L + L PI G + E Sbjct: 88 PQQLILPDTVHEGIIINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKDTPINWTTKVE 143 Query: 59 GDFQSPEGFYSVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----- 111 P + + + + G N Y G+ IHG Sbjct: 144 RKKAGPTWTPTAKMHTEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIG 203 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 S GC + + I +F V V S + Sbjct: 204 LRVSHGCVRLRNDDIKFLFENVPVGTRVQFIDEPVKAT---------TEPDGSRYIEVHN 254 Query: 169 QLKPGYDYFEQTRKPP 184 L FE P Sbjct: 255 PLSTTEAQFEGKEAVP 270 >gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigella flexneri 2a str. 301] Length = 306 Score = 146 bits (368), Expect = 4e-34 Identities = 33/210 (15%), Positives = 50/210 (23%), Gaps = 29/210 (13%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRRE 58 + LP + I I E +L + L PI G + E Sbjct: 88 PQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKDTPINWTTKVE 143 Query: 59 GDFQSPEGFYSVQPNQ--LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----- 111 P + + + + G N Y G+ IHG Sbjct: 144 HKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIG 203 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 S GC + + I +F V V S + Sbjct: 204 LRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKAT---------TEPDGSRYIEVHN 254 Query: 169 QLKPGYDYFEQTRKPPTVSVCNGRYVFSKP 198 L FE P + + V +P Sbjct: 255 PLSTTEAQFEGQEIVPITLTKSVQTVTGQP 284 >gi|68515740|gb|EAN39455.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 304 Score = 145 bits (367), Expect = 6e-34 Identities = 34/203 (16%), Positives = 55/203 (27%), Gaps = 47/203 (23%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + ++++ PI G +PE Sbjct: 87 QLILPDAPREGIVINIAEMRLYYYPKGK----KIVEVLPIGIGQVG---------RDTPE 133 Query: 66 -GFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIHGA 109 +VQ + NP I G N Y G IHG Sbjct: 134 NWVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYIGNLYAIHGT 193 Query: 110 CV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS 161 S GC + D I+ +F V + + + + Sbjct: 194 NATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKAT---------EEPDGA 244 Query: 162 PNYDFWKQLKPGYDYFEQTRKPP 184 + + L F+ P Sbjct: 245 RYLEVHQPLSRTQAEFDSAEPVP 267 >gi|24375244|ref|NP_719287.1| LysM domain protein [Shewanella oneidensis MR-1] Length = 304 Score = 144 bits (364), Expect = 1e-33 Identities = 28/195 (14%), Positives = 47/195 (24%), Gaps = 29/195 (14%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----RE 58 + LP +P I I E +L + + ++ PI G + Sbjct: 85 PKQLILPNAPREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKDTPENWVTSVQ 140 Query: 59 GDFQSPEGFYSV-QPNQLNPDSRYYLAINI-GFPNAYDRAHGYTGKYLMIHGACVS---- 112 +P + + A+ G N Y G IHG S Sbjct: 141 RKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIG 200 Query: 113 ----VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 GC + I+ +F V + + + + Sbjct: 201 LRVSQGCVRLRHDDIEHLFKTVPIGTRVQFVNQPIKAT---------EEPDGKRYLAVHQ 251 Query: 169 QLKPGYDYFEQTRKP 183 L FE Sbjct: 252 PLSRTIAEFESNEPV 266 >gi|69945495|ref|ZP_00636533.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 304 Score = 143 bits (362), Expect = 2e-33 Identities = 34/202 (16%), Positives = 55/202 (27%), Gaps = 47/202 (23%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + +++ PI G +PE Sbjct: 87 QLILPNAPREGIVINVAEMRLYYYPKGKN----IVEVLPIGIGQIGKD---------TPE 133 Query: 66 -GFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIHGA 109 +VQ + NP I G N Y G IHG Sbjct: 134 KWVTTVQRKRANPTWTPTPRIRKEYLAKGEVLPAVWPAGPDNPMGLFALYIGNLYAIHGT 193 Query: 110 CV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS 161 S GC + DA I+ +F V + + + + + Sbjct: 194 NATFGIGLRISQGCIRLRDADIEHLFNSVPEGTRVEFTNQPIKA---------SEEPDGN 244 Query: 162 PNYDFWKQLKPGYDYFEQTRKP 183 + + L +E Sbjct: 245 RYLEVHQPLSRTMAEYESAEPV 266 >gi|69950815|ref|ZP_00638633.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 305 Score = 141 bits (355), Expect = 1e-32 Identities = 25/193 (12%), Positives = 45/193 (23%), Gaps = 29/193 (15%) Query: 7 KQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGD 60 + LP + I E +L + L PI G + Sbjct: 88 QLILPNAKREGVVINSAEMRLYYYPKGKNTVEVL----PIGIGQIGKDTPENWVTTVQRK 143 Query: 61 FQSPEGFYSVQPNQLN--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------- 111 +P +V + G N Y G +HG Sbjct: 144 RANPTWTPTVNIRKSYAAKGITLPAVWPAGADNPMGLFALYVGNLYAVHGTNATFGIGLR 203 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQL 170 S GC + D I+ ++ V + + + + + + L Sbjct: 204 VSSGCVRLRDEDIEHLYNSVPVGTRVEFINQPIKAT---------EEPDGNRYLEVHEPL 254 Query: 171 KPGYDYFEQTRKP 183 F+ Sbjct: 255 SRTQAEFDSLEPV 267 >gi|68543641|ref|ZP_00583338.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 304 Score = 139 bits (351), Expect = 3e-32 Identities = 31/195 (15%), Positives = 45/195 (23%), Gaps = 46/195 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE-GFYSVQ 71 I I E +L + + ++ PI G +PE SVQ Sbjct: 94 PREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKD---------TPENWVTSVQ 140 Query: 72 PNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIHGACVS---- 112 + NP I G N Y G IHG S Sbjct: 141 RKRANPTWTPTPRIRKEYAAKGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIG 200 Query: 113 ----VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 GC + I+ +F V + + + + Sbjct: 201 LRVSQGCVRLRHEDIEHLFKNVPVGTRVQFVNQPIKAT---------EEPDGKRYLAVHQ 251 Query: 169 QLKPGYDYFEQTRKP 183 L FE Sbjct: 252 PLSRTVAEFESNEPV 266 >gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 340 Score = 138 bits (349), Expect = 6e-32 Identities = 34/218 (15%), Positives = 54/218 (24%), Gaps = 51/218 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP +P I + E +L + + YPI G + Sbjct: 86 PTQMLLPDTPREGIVVNLAELRLYYYPKGKNT----VIVYPIGIGQLG---------RNT 132 Query: 64 PEGFYSVQPNQLNPDSRYYLAI----------------NIGFPNAYDRAHGYT---GKYL 104 P SV + NP I G N G Sbjct: 133 PLMTTSVSEKRENPTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGLHALRLSAHGGVY 192 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQ 156 ++HG S GC + I +F V + + Sbjct: 193 LLHGTNADFGIGMRVSSGCIRLRPDDIKALFDNVPVGTRVQILNDAIK---------TSV 243 Query: 157 RHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGRYV 194 + + L QT K P ++V ++V Sbjct: 244 EPDGKRYVEVHQPLSKTDKDDPQTMKIP-LTVKTQKFV 280 >gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibrio parahaemolyticus RIMD 2210633] Length = 308 Score = 138 bits (347), Expect = 1e-31 Identities = 33/208 (15%), Positives = 54/208 (25%), Gaps = 50/208 (24%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P I I E +L + ++ +P+ G + Sbjct: 91 PSQLILPEVPHQGIVINLAELRLYYFPEGED----VVHVFPVGIGRIG---------RDT 137 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAH---GYTGKYLM 105 P S+ + NP +I G N Y + Sbjct: 138 PVMTTSISQKRPNPTWTPPASIRAEYRAKGVDLPAVVPAGPDNPLGLFALRLAYGNGEYL 197 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG VS GC M + I+ +F VR + V + Sbjct: 198 IHGTNKDFGIGMRVSAGCIRMDPSDIEWLFDKVRRGEKVNIINQPVKV---------SLE 248 Query: 158 HRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 S + + L + + P Sbjct: 249 PDRSVFVEAHEPLTRSNGE-KDHLQVPK 275 >gi|69926066|ref|ZP_00623537.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 187 Score = 136 bits (342), Expect = 4e-31 Identities = 32/153 (20%), Positives = 50/153 (32%), Gaps = 20/153 (13%) Query: 1 PVSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ ++ + Q +P I I ER+L L Y I G G R Sbjct: 42 PIPRQLVHFQSRYAPGTIVISTGERRLYLVLPDGQAL-----RYGIGVGRDGFRWGGVHR 96 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P Q + PD ++ I N Y G IHG+ Sbjct: 97 ITAKKEWPSWTPPAQMLRRRPDLPRHMKGGI--DNPLGARALYLGSTLYRIHGSNEPETI 154 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC+ MT+ + +++ V + Sbjct: 155 GHAVSSGCFRMTNEDVKDLYDRVSVGTTVVVKN 187 >gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9] Length = 301 Score = 136 bits (342), Expect = 4e-31 Identities = 32/216 (14%), Positives = 51/216 (23%), Gaps = 54/216 (25%) Query: 1 PVS-----KELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP 54 P K LP I I E +L + + ++ +PI G Sbjct: 72 PTPGQLLTVPTKVILPNVKRKGIIINLAELRLYYFPED---DKSIVYIFPIGIGRVG--- 125 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAI----------------NIGFPNAYDRAHG 98 +P V NP I G N Sbjct: 126 ------RATPNMITKVSQKIENPTWTPTANIRKEYREKKDIELPAVVPAGPENPLGEYAM 179 Query: 99 ---YTGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 Y+ +IHG VS GC M I+ +F V + + Sbjct: 180 RLAYSRGEYLIHGTNKDFGIGMRVSSGCIRMNPWDIEWLFPQVPRGTSVQIINQPLK--- 236 Query: 148 FRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQTRKP 183 + + + L + Q++ Sbjct: 237 ------QSVEPDGALYVEVHQPLSKSDEQVGQSKPV 266 >gi|75855745|ref|ZP_00763388.1| COG1376: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 301 Score = 135 bits (340), Expect = 6e-31 Identities = 32/208 (15%), Positives = 54/208 (25%), Gaps = 50/208 (24%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P I I E +L + ++ +P+ G + Sbjct: 84 PTQLILPDVPHKGIVINLAELRLYYFPKGED----IVHVFPVGIGRIG---------RDT 130 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAH---GYTGKYLM 105 P + + NP +I G N Y + Sbjct: 131 PVMTTRISQKRPNPTWTPPASIRAEYKAKGIDLPTVVPAGPDNPLGMFALRLAYGNGEYL 190 Query: 106 IHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG VS GC M + I+ +F VR+ + V + Sbjct: 191 IHGTNKDFGIGMRVSAGCIRMDPSDIEWLFEKVRNGEEVNIINQPVKV---------SLE 241 Query: 158 HRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 S + + L + + P Sbjct: 242 PDRSVFLEAHEPLTRSNGE-KDHLQVPK 268 >gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 194 Score = 134 bits (339), Expect = 1e-30 Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 20/152 (13%) Query: 2 VSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRR 57 + +E + P I + +R+L Y + G G K Sbjct: 50 IPRETVAYAGKEKPGTIVVSTSQRRLYYVLGGGEAI-----RYGVGVGRQGFSWSGTKTI 104 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC------ 110 G + P Q PD Y+A G N Y G IHG+ Sbjct: 105 TGKKEWPAWRPPAQMLARRPDLPRYMA--GGQDNPLGARAMYLGSSLYRIHGSNEPETMG 162 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC MT+ + +++ V+ Sbjct: 163 AAVSSGCIRMTNKDVVDLYDRVKVGTKVIVKD 194 >gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 283 Score = 132 bits (332), Expect = 6e-30 Identities = 27/153 (17%), Positives = 42/153 (27%), Gaps = 21/153 (13%) Query: 1 PVSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + + G I I + L L + Y + G G K Sbjct: 138 PKFERQLVEYHGKEAAGTIVIDTSNKFLYLVQGGGKAL-----RYGVGVGKPGFLWAGTK 192 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHG------ 108 + P + + PD + + G N Y G IHG Sbjct: 193 TISAKREWPAWTPPAEMLKRRPDLPRH--MVGGPQNPLGARAMYLGSSLYRIHGSNEPWT 250 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ VR Sbjct: 251 IGTNVSSGCIRMRNRDVIDLYDRVRVGATVVVI 283 >gi|26247257|ref|NP_753297.1| Hypothetical protein ycfS precursor [Escherichia coli CFT073] Length = 377 Score = 130 bits (328), Expect = 2e-29 Identities = 34/198 (17%), Positives = 52/198 (26%), Gaps = 47/198 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ LP +P I I E +L + + YPI G GD + Sbjct: 148 PLQTLLPDAPREGIVINIAELRLYYYPPGKNS----VTVYPIGIGQLG-------GDTLT 196 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGY---TGKYLM 105 P +V + NP I G N G + Sbjct: 197 PTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYL 256 Query: 106 IHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 +HG S GC + D I +F+ V + + I Sbjct: 257 LHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKI---------SAE 307 Query: 158 HRNSPNYDFWKQLKPGYD 175 + + + L D Sbjct: 308 PNGARLVEVHQPLSEKID 325 >gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 231 Score = 130 bits (328), Expect = 2e-29 Identities = 28/148 (18%), Positives = 43/148 (29%), Gaps = 19/148 (12%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + PG P I I + L L + Y I G G K Sbjct: 91 QVVAYDGPGRPGGIVIDTNAKFLYLIQPAGQAI-----RYGIGVGRPGFVWTGTKTITAK 145 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------V 111 + P+ + + PD ++A G N Y G IHG V Sbjct: 146 REWPDWTPPAEMLRRRPDLPRHMAGGPG--NPLGARAMYLGTSLFRIHGTNEPHTIGQNV 203 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ Sbjct: 204 SSGCIRMMNEDVIDLYERTSVGTRVEVI 231 >gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Bradyrhizobium japonicum USDA 110] Length = 314 Score = 130 bits (328), Expect = 2e-29 Identities = 26/152 (17%), Positives = 41/152 (26%), Gaps = 21/152 (13%) Query: 1 PVSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ G I + + L L + Y I G G K Sbjct: 169 PKFEKQLVDYSGKESAGTIVVDTPNKFLYLVEGNGRAM-----RYGIGVGRPGFTWSGVK 223 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHG------ 108 + P+ + PD ++ G N Y G IHG Sbjct: 224 AITAKREWPDWTPPAEMIARRPDLPRHME--GGPENPLGARAMYLGSTLYRIHGSNEPWT 281 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + +++ V Sbjct: 282 IGTNVSSGCIRMRNEDVIDLYGRVNVGTRVVV 313 >gi|15073711|emb|CAC45353.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 246 Score = 130 bits (327), Expect = 3e-29 Identities = 25/152 (16%), Positives = 42/152 (27%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + + P I I R L L + Y + G G R Sbjct: 100 LPQMIAYETKEKPGTIVIDTNNRFLYLVTGNGEA-----RRYGVGVGKPGFEWAGEHRIT 154 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGACV---- 111 + P + +YL ++ G N Y G IHG Sbjct: 155 RKAEWPNWTPPQEMIAREAARGHYLPARMDGGPENPLGARAMYLGSTLYRIHGTNAPWTI 214 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ V+ Sbjct: 215 GYGVSSGCIRMRNEDVVDLYERVKVGTKVIVI 246 >gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 187 Score = 129 bits (326), Expect = 3e-29 Identities = 32/153 (20%), Positives = 50/153 (32%), Gaps = 20/153 (13%) Query: 1 PVSKELKQ-QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ ++L Q +P + I ER+L L Y I G G R Sbjct: 42 PIPRQLVYFQSRYAPGTVVIRTGERRLYLVLPGGQAL-----RYGIGVGRDGFRWSGVHR 96 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P Q + PD + + G N Y G IHG+ Sbjct: 97 ISAKKEWPSWTPPAQMLRRRPDLPRF--MRGGLENPLGARAMYLGSTLYRIHGSNEPETI 154 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC+ MT+ + +++ V + Sbjct: 155 GQAVSSGCFRMTNDDVVDLYNRVSVGTTVVVKN 187 >gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 129 bits (326), Expect = 3e-29 Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 20/153 (13%) Query: 1 PVSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ + + +P I + ER+L L Y I G G R Sbjct: 59 PIPRTTVNYSGNYAPGTIVVNTSERRLYLVLQNGQAL-----RYGIGVGRDGFRWGGVHR 113 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P+ Q PD ++ I N Y G IHG+ Sbjct: 114 ITAKKEWPDWTPPSQMLARRPDLPRHMKGGI--ENPLGARAMYLGSTLYRIHGSNEPETI 171 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC+ MT+ + ++++ V + Sbjct: 172 GQAVSSGCFRMTNDDVSDLYSRVSVGTTVVVLN 204 >gi|17989404|ref|NP_542037.1| PROTEIN YBIS PRECURSOR [Brucella melitensis 16M] Length = 277 Score = 129 bits (325), Expect = 4e-29 Identities = 23/152 (15%), Positives = 40/152 (26%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RRE 58 + + + P I I R L L +A + Y + G K R Sbjct: 131 LPQIVSYSGKEKPGTIVIDTASRFLYLVQADGKA-----RRYGVGVGKQGFSWKGTQRIS 185 Query: 59 GDFQSPEGFYSVQP--NQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P + + ++ G N Y G IHG Sbjct: 186 RKAEWPTWTPPSEMIARERKKGRFLPARMDGGINNPLGARALYLGSTLYRIHGTNQPWTI 245 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC M + + +++ Sbjct: 246 GKAMSSGCIRMRNEDVTDLYERTPVGTRVVVR 277 >gi|69929997|ref|ZP_00626874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 199 Score = 129 bits (324), Expect = 4e-29 Identities = 26/151 (17%), Positives = 44/151 (29%), Gaps = 19/151 (12%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + + P I I ER L L + Y I G G Sbjct: 54 QVVLYRTTEPPGTIIIQTAERHLYLIQGNGRAI-----RYGIGVGREGFQWQGILNITRK 108 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------V 111 + P+ + + P ++A G N Y G IHG + Sbjct: 109 AEWPDWTPPPEMIKRQPYLPRFMAGGPG--NPLGARAMYLGTTVYRIHGTNRPDTIGTAI 166 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ + +A + +++ V Sbjct: 167 SSGCFRLVNADVADLYDRVPVGTRVIVRQKP 197 >gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yersinia pseudotuberculosis IP 32953] Length = 354 Score = 128 bits (323), Expect = 6e-29 Identities = 31/206 (15%), Positives = 46/206 (22%), Gaps = 49/206 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP +P I I E +L + + YPI G + Sbjct: 88 PNQMLLPDTPREGIVINLAELRLYYYPKGQNK----VIVYPIGIGQLG---------RDT 134 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKY---LM 105 P S+ NP I G N + + Sbjct: 135 PTMVTSISQKIPNPTWTPTANIRKNYLAEGITLPSVVPAGPDNPMGQFALRLSAGRGEYL 194 Query: 106 IHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG S GC + I+ +F V + V Sbjct: 195 IHGTNADFGIGLRVSSGCIRLRPDDIEALFNSVPKGTRVQIINEPVKYA---------VE 245 Query: 158 HRNSPNYDFWKQLKPGYDYFEQTRKP 183 + + L QT Sbjct: 246 PDGKRYVEVHQPLSRVDSDDPQTMPI 271 >gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Bradyrhizobium japonicum USDA 110] Length = 224 Score = 128 bits (322), Expect = 8e-29 Identities = 25/156 (16%), Positives = 42/156 (26%), Gaps = 23/156 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + I I +L L + Y I GL G Sbjct: 66 LRQRVDYTTNEPVGTIVIDTAAHQLYLVEGDGKAM-----RYGIGVGKDGLAFAGTATIR 120 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-----LMIHGA-- 109 + P + P +LA + G N Y + IHG Sbjct: 121 RKAEWPHWTPTKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTE 180 Query: 110 ------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC + + I ++++ V+ Sbjct: 181 PETIGRAVSSGCIRLINQDIIDLYSRVKIGSRVVVI 216 >gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 239 Score = 128 bits (322), Expect = 8e-29 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + Q +P I + L Y I G G K Sbjct: 84 QIVAYQTREAPGTIVVDTPNTYLYYVLGGGRAI-----RYGIGVGRDGFTWSGVKSVARK 138 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGACV-------- 111 + P+ + P ++A G N Y G IHG Sbjct: 139 AEWPDWTPPPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTVYRIHGTNAPSTIGTHV 196 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ + ++++ V Sbjct: 197 SSGCIRLTNEDVKDLYSRVAVGAKVIV 223 >gi|54297427|ref|YP_123796.1| Legionella secretion system protein A [Legionella pneumophila str. Paris] Length = 243 Score = 128 bits (322), Expect = 9e-29 Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 20/192 (10%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + P + + FK ERK+ELW E+ I YP+ +SG LGPK RE D Sbjct: 57 YFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDK 116 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGC 115 Q PEG Y + NP S +L++ I +PN++DR GY G + IHG +SVGC Sbjct: 117 QIPEGIYKLVN--FNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGC 174 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNY------DFWKQ 169 A+ D ID++F R G ++QV I P + Q+ S + +KQ Sbjct: 175 LAVGDLAIDQLFILAR---RVGLKNIQVIIAPNDL---RYQKPSTSTFAQPRWLPELYKQ 228 Query: 170 LKPGYDYFEQTR 181 + F++T+ Sbjct: 229 ISESLKPFKKTK 240 >gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 127 bits (320), Expect = 1e-28 Identities = 28/156 (17%), Positives = 45/156 (28%), Gaps = 21/156 (13%) Query: 1 PVSKELKQ--QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ + +P I I ER L L + Y I G G Sbjct: 47 PEWQKQVVYFRTTETPGTIIISTAERHLYLVQPGGRAI-----RYGIGVGRDGFQWQGLV 101 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC---- 110 + P+ + Q P ++A G N Y G IHG Sbjct: 102 NITNKKEWPDWTPPPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGTTVYRIHGTNRPDT 159 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 VS GC+ + + + +++ V Sbjct: 160 IGTKVSSGCFRLVNNDVADLYDRVPVGTKVVIRQKP 195 >gi|68189671|gb|EAN04335.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 266 Score = 127 bits (320), Expect = 2e-28 Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---KRRE 58 + +E++ P +P I + +ER L L + Y + G G + Sbjct: 120 LPQEVRYDGPQAPGTIVVDTKERFLYLVLKDGQA-----RRYGVGVGKDGFGWTGTHKVT 174 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGACV---- 111 + P+ + + L + G N Y G IHG Sbjct: 175 AKREWPDWRPPAEMIARERKNGKILPTLVKGGPQNPLGARALYLGSTLYRIHGTNAPWTI 234 Query: 112 ----SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ V Sbjct: 235 GQAVSSGCIRMRNEDVIDLYERVSVGTKVVVI 266 >gi|13474433|ref|NP_106001.1| hypothetical protein mlr5313 [Mesorhizobium loti MAFF303099] Length = 205 Score = 126 bits (318), Expect = 3e-28 Identities = 19/152 (12%), Positives = 40/152 (26%), Gaps = 22/152 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 +E+ P I + + + L + Y I G G Sbjct: 58 QEVNYDTKEKPGTIIVDTQNKFLYFVEDDGRAI-----RYGIGVGREGFEWHGTAHIALK 112 Query: 61 FQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGK-----YLMIHGAC---- 110 + P + + P+ ++ + G N Y +HG+ Sbjct: 113 REWPTWTPPREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNS 172 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +S GC + + I +++ Sbjct: 173 IGKAMSSGCIRLMNQDIIDLYDRTSVGAKVIV 204 >gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesorhizobium loti MAFF303099] Length = 243 Score = 126 bits (318), Expect = 3e-28 Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + +E+ P P I I + L L + + Y + G G + Sbjct: 97 LPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNGKA-----RRYGVGTGKPGFEWSGTHKIT 151 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P+ Q + YL + G N Y G IHG Sbjct: 152 NKREWPDWRPPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTI 211 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V Sbjct: 212 GGAVSSGCIRMRNEDVVDLYERVNVGTTVEVI 243 >gi|15074524|emb|CAC46170.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti] Length = 193 Score = 126 bits (317), Expect = 3e-28 Identities = 27/158 (17%), Positives = 46/158 (29%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P + + SP I + EER L + Y I G G Sbjct: 41 PRYRRQEVAYYGGESPGTIVVNTEERYLYYVQGGGSAV-----RYGIGVGEEGRTLKGRA 95 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA 109 + + P + + P +Y ++ G N A Y + +HG Sbjct: 96 KIGRKAEWPSWTPTANMIRRKPHLAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGT 155 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC +T+ I ++++ Sbjct: 156 NEPWTIGQAVSSGCIRLTNDDIVDLYSRTPVGATVLII 193 >gi|68192907|gb|EAN07560.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 196 Score = 126 bits (317), Expect = 4e-28 Identities = 23/158 (14%), Positives = 42/158 (26%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPK 55 P + + P I + ++ER L + Y + G G Sbjct: 44 PQFRRQRVPYAGGEKPGTIIVNRDERFLYYVEGDGWA-----TRYGVGVGKEGRTLSGRA 98 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA 109 + P + + P +Y ++ G N Y + +HG Sbjct: 99 VVGRKAEWPSWTPTANMMRREPRYLQYAGGVSGGPHNPLGARALYLYRNGRDTMYRLHGT 158 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC + + I ++ V Sbjct: 159 NEPWSIGQAVSSGCIRLLNDDIIHLYERVPVGTAVMII 196 >gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 196 Score = 126 bits (317), Expect = 4e-28 Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 19/151 (12%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + + P I I ER L L + Y I G G Sbjct: 51 QVVLYRTTEPPGTIIIQTAERHLYLIQGNGRAI-----RYGIGVGRAGFQWQGILNITRK 105 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------V 111 + P+ + P ++A G N Y G IHG + Sbjct: 106 AEWPDWTPPPEMIARQPYLPRFMAGGPG--NPMGARAMYLGTTVYRIHGTNQPDTIGTAI 163 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ + +A + +++ + Sbjct: 164 SSGCFRLVNADVIDLYDRIPVGTRVIVRQKP 194 >gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 309 Score = 126 bits (316), Expect = 4e-28 Identities = 22/178 (12%), Positives = 42/178 (23%), Gaps = 28/178 (15%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGDFQSPEGFYSVQ 71 I I E +L + ++ + P+ G + +P + Sbjct: 102 ILINIAEMRLFYFPKN----FEKVVVLPVGIGEIGKETPSKWKTYVKRKKYAPTWTPTKD 157 Query: 72 PNQLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 ++ L G N Y IHG V+ GC + + Sbjct: 158 MHKEYSSLGIKLLKIYPSGKNNPMGLYALYLEDLYAIHGTNTNFGIGLRVTHGCIRLRND 217 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDYFEQ 179 I +F V + V + + + + L Sbjct: 218 DIKYLFNNVPVGTEVYFINEPVKVT---------HESDGNKYIEVHQPLSENLKELNS 266 >gi|15155625|gb|AAK86477.1| AGR_C_1197p [Agrobacterium tumefaciens str. C58] Length = 275 Score = 126 bits (316), Expect = 4e-28 Identities = 26/152 (17%), Positives = 41/152 (26%), Gaps = 19/152 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + Q P I I R L L A + Y + G G + Sbjct: 129 LPQIVSYQTAEKPGTIVIDTPNRFLYLVLADGKA-----RRYGVGVGKPGFEWAGTHKVT 183 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P + +YL + G N Y G IHG Sbjct: 184 RKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTI 243 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ V Sbjct: 244 GSNNSSGCIRMRNEDVTDLYERVNVGTRVIVI 275 >gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobium japonicum USDA 110] Length = 262 Score = 125 bits (315), Expect = 5e-28 Identities = 23/149 (15%), Positives = 40/149 (26%), Gaps = 19/149 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + +P I I L Y I G G + Sbjct: 106 RRQTVSYATREAPGTIIIDTPNTYLYYVLGNGQAV-----RYGIGVGRDGFTWSGVQSVT 160 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGACV------ 111 + P+ + P ++A G N Y G + IHG Sbjct: 161 KKAEWPDWTPPPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTIYRIHGTNAPDTIGK 218 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ + ++++ V Sbjct: 219 HVSSGCIRLTNDDVTDLYSRVNVGTKVIV 247 >gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 199 Score = 125 bits (315), Expect = 5e-28 Identities = 28/145 (19%), Positives = 47/145 (32%), Gaps = 19/145 (13%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQ 62 + P +P I + ER+L L Y + G G + + Sbjct: 60 VPYSGPHAPGTIVVSTAERRLYLVLPNGEAL-----RYGVGVGRPGFTWGGTQTITMKRE 114 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGAC--------VSV 113 P+ + + PD Y+ I N Y G + IHG+ VS Sbjct: 115 WPDWRPPAEMLRRRPDLPRYMKGGI--ENPLGARAMYLGNTIYRIHGSNEPETIGTAVSS 172 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC MT+ + +++ V+ Sbjct: 173 GCIRMTNEDVADLYGRVKVGARVIV 197 >gi|69926259|ref|ZP_00623730.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 259 Score = 125 bits (315), Expect = 6e-28 Identities = 26/153 (16%), Positives = 41/153 (26%), Gaps = 21/153 (13%) Query: 1 PVSKELKQQLPGS--PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ G I I + L L + Y + G G K Sbjct: 114 PKFEKQLVDYHGKETAGTIVIDTSSKFLYLVQGDGKAL-----RYGVGVGKPGFLWAGVK 168 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHG------ 108 + P + + PD ++ G N Y G IHG Sbjct: 169 TVTAKKEWPGWTPPAEMLKRRPDLPRHME--GGPQNPLGARAMYLGSSLYRIHGSNEPWT 226 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V Sbjct: 227 IGTNVSSGCIRMRNQDVIDLYGRVHVGARVVVI 259 >gi|17936219|ref|NP_533009.1| hypothetical protein Atu2336 [Agrobacterium tumefaciens str. C58] Length = 205 Score = 125 bits (314), Expect = 8e-28 Identities = 20/154 (12%), Positives = 43/154 (27%), Gaps = 22/154 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ + + R+L + Y + GL G Sbjct: 54 RRQEVTYDTSHPAGTVVVDTPARRLYYVMGEGRAM-----RYGVGVGRQGLALKGDAYIG 108 Query: 59 GDFQSPEGFYSVQPNQLNP-DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P + + +P + ++ + G N Y + +HG Sbjct: 109 RKSEWPSWTPTANMMRRDPRNLKFAGGMPGGPNNPLGARALYLYRGGNDTMFRLHGTNQP 168 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +S GC M + I ++++ V Sbjct: 169 QSIGHAMSSGCIRMLNHDIIDLYSRVPVGSRVVV 202 >gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 431 Score = 124 bits (313), Expect = 1e-27 Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 23/191 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQL--IKSYPICKWSGGLGPKRREG 59 V + L Q P I + + +L L++ + + + Y I G K EG Sbjct: 154 VPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYITHGKLGA-EKLVEG 212 Query: 60 DFQSPEGFYSVQP---NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------ 110 D ++P G Y V Q D A + +PN +D+ G G + +HG Sbjct: 213 DKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGGSGIWLHGTPSNTFAR 272 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDA-FVGGQPSVQVSIYPFRMTDANMQRHRNSPN--Y 164 S GC +T+ +D + ++ + V ++ + + RN N Sbjct: 273 PPRASDGCVVLTNQDLDVVAKNLQVGLTPVIISNS-VE----WLSLDDWAKERNELNKTI 327 Query: 165 DFWKQLKPGYD 175 D W+ D Sbjct: 328 DAWRADWESRD 338 >gi|13471882|ref|NP_103449.1| probable carnitine operon oxidoreductase [Mesorhizobium loti MAFF303099] Length = 242 Score = 124 bits (312), Expect = 1e-27 Identities = 24/154 (15%), Positives = 42/154 (27%), Gaps = 22/154 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RRE 58 + +K + P I I + L L + Y I G G + Sbjct: 83 RPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAI-----RYGIGVGRDGFGWAGIVKVG 137 Query: 59 GDFQSPEGFYSVQPNQLNPD-SRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P + +P + + G N Y + IHG Sbjct: 138 RMAEWPTWTPPAEMVARDPKARPWANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEP 197 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + I ++ + ++ Sbjct: 198 WTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKVIV 231 >gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 267 Score = 124 bits (311), Expect = 2e-27 Identities = 24/153 (15%), Positives = 38/153 (24%), Gaps = 21/153 (13%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ I I + L L + Y + G G K Sbjct: 122 PRYEKQLVDYHGGEKAGTIVIDTPNKFLYLVQGDGKAL-----RYGVGVGRPGFTWSGVK 176 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHG------ 108 + P + PD ++ N Y G IHG Sbjct: 177 TITAKREWPAWTPPKEMLARRPDLPRHMEGG--PANPLGARAMYLGSSLYRIHGSNEPWT 234 Query: 109 --ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ V Sbjct: 235 IGTNVSSGCIRMRNEDVIDLYGRVGVGTKVVVI 267 >gi|68190685|gb|EAN05343.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 206 Score = 124 bits (311), Expect = 2e-27 Identities = 21/150 (14%), Positives = 39/150 (26%), Gaps = 22/150 (14%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQS 63 Q P + + +++ L L Y I G G R + Sbjct: 62 SYQTDEKPGTVVVDTKDKFLYLVMEGGKAM-----RYGIGVGREGFSWSGTARVALKREW 116 Query: 64 PEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------- 110 P + P+ ++ + G N Y +HG Sbjct: 117 PTWTPPAAMIKRQPELAKWAGGMPPGLSNPLGARALYLFNKNGDTGYRLHGTPEWWSIGQ 176 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC + + I +++ V Sbjct: 177 AMSSGCIRLLNQDIIDLYNRVEVGAKVIVK 206 >ErfK_YbiS_YhnG_Q89DB0_182-313_PF03734.4 Length = 132 Score = 123 bits (310), Expect = 2e-27 Identities = 25/139 (17%), Positives = 38/139 (27%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 S I + + L L + Y I G G K + P+ Sbjct: 1 ESAGTIVVDTPNKFLYLVEGNGRAM-----RYGIGVGRPGFTWSGVKAITAKREWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHG--------ACVSVGCYAMT 119 + PD ++ G N Y G IHG VS GC M Sbjct: 56 PAEMIARRPDLPRHME--GGPENPLGARAMYLGSTLYRIHGSNEPWTIGTNVSSGCIRMR 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +++ V Sbjct: 114 NEDVIDLYGRVNVGTRVVV 132 >gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesorhizobium loti MAFF303099] Length = 426 Score = 123 bits (310), Expect = 2e-27 Identities = 29/158 (18%), Positives = 47/158 (29%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P + G P I I R+L L ++ + Y I GL G Sbjct: 274 PEFVPQDVEFTGYEPGTIVIDTSARRLYLVESFSTA-----RRYAIAVGREGLQFKGTVA 328 Query: 57 REGDFQSPEGFYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA 109 + P ++ + P +Y + G N Y L IHG Sbjct: 329 VGDKQEWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGT 388 Query: 110 --------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC+ M + + ++++ VR Sbjct: 389 IAPQSIGTSASNGCFRMINEHVMDLYSRVRVGTKVVII 426 >gi|12515680|gb|AAG56665.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933] Length = 334 Score = 123 bits (310), Expect = 2e-27 Identities = 35/223 (15%), Positives = 56/223 (25%), Gaps = 53/223 (23%) Query: 1 PVSKE-------LKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K + LP +P I + E +L + + + YPI GL Sbjct: 74 PVPKPGTTITIPSQLXLPDAPRQGIIVNLAELRLYYYPPGEN----IXQVYPIGIGLQGL 129 Query: 53 GP----KRREGDFQSPEGFYSVQPNQLN--PDSRYYLAINIGFPNAYDRAHGY---TGKY 103 R +P + Q + + + G N R Sbjct: 130 ETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGE 189 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANM 155 +IHG S GC M I +F+ VR + V Sbjct: 190 YLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKY---------S 240 Query: 156 QRHRNSPNYDFWKQLK---------------PGYDYFEQTRKP 183 + + L G+ F+ + Sbjct: 241 VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAV 283 >ErfK_YbiS_YhnG_Q89E55_71-202_PF03734.4 Length = 132 Score = 123 bits (309), Expect = 3e-27 Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ER+L L Y I G G R + P+ Sbjct: 1 YAPGTIVVNTSERRLYLVLQNGQAL-----RYGIGVGRDGFRWGGVHRITAKKEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 Q PD ++ I N Y G IHG+ VS GC+ MT Sbjct: 56 PSQMLARRPDLPRHMKGGI--ENPLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMT 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + ++++ V Sbjct: 114 NDDVSDLYSRVSVGTTVVV 132 >gi|75818411|ref|ZP_00748578.1| COG1376: Uncharacterized protein conserved in bacteria [Vibrio cholerae V51] Length = 306 Score = 123 bits (309), Expect = 3e-27 Identities = 31/211 (14%), Positives = 53/211 (25%), Gaps = 50/211 (23%) Query: 2 VSKELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 +S K LP I I E +L ++ G + +P+ G Sbjct: 79 ISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGK----VHIFPVGIGRIG--------- 125 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHG---YTGK 102 +P S+ + P +I G N Y Sbjct: 126 RDTPVMQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSG 185 Query: 103 YLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDAN 154 +IHG VS GC M I+ ++ V + + + Sbjct: 186 EYLIHGTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVA-------- 237 Query: 155 MQRHRNSPNYDFWKQLKPGYDYFEQTRKPPT 185 S + + L ++ P Sbjct: 238 -LEPDRSVFIEVHEPLTRSNG-VKKNLVVPK 266 >gi|15074019|emb|CAC45666.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 201 Score = 123 bits (309), Expect = 3e-27 Identities = 32/187 (17%), Positives = 48/187 (25%), Gaps = 28/187 (14%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + P + I E R L L + Y I GL G Sbjct: 22 PRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGGMAL-----RYGIGVGKAGLEFEGEA 76 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAIN--IGFPNAYDRAHGYTGKY-----LMIHG 108 R + P + P+ LA G N Y + IHG Sbjct: 77 RVGRKAEWPRWTPTSDMVAREPERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHG 136 Query: 109 A--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ-PSVQVSIYPFRMTDANMQRHR 159 VS GC + + I ++++ V + + P Sbjct: 137 TTEAWSIGKAVSSGCIRLFNPDIIDLYSRVPEGSRVVVLQAEPPMSQPTD--APMSTAAD 194 Query: 160 NSPNYDF 166 S + F Sbjct: 195 GSGSLSF 201 >gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 321 Score = 123 bits (308), Expect = 3e-27 Identities = 31/196 (15%), Positives = 50/196 (25%), Gaps = 47/196 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ LP +P I I E +L ++ + YPI G GD + Sbjct: 91 PLQTLLPDAPREGIVINLAELRLYYYQPGKNT----VTVYPIGIGQLG-------GDTLT 139 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGY---TGKYLM 105 P ++ + NP I G N G + Sbjct: 140 PTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYL 199 Query: 106 IHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 +HG S GC + D I+ +F V + + Sbjct: 200 LHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNIINTPIKA---------SVE 250 Query: 158 HRNSPNYDFWKQLKPG 173 + + L Sbjct: 251 PGGVRLVEVHQPLSKN 266 >gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 255 Score = 123 bits (308), Expect = 3e-27 Identities = 22/144 (15%), Positives = 35/144 (24%), Gaps = 19/144 (13%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQS 63 I I L Y + G G + + Sbjct: 89 SYPTKEPAGTIVIDTANTYLYYVLGGGRAI-----RYGVGVGREGFTWAGVQTITRKAEW 143 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVG 114 P+ + P ++A G N Y G IHG VS G Sbjct: 144 PDWRPPAEMIARQPYLPRFMAGGPG--NPLGARAMYLGSTTYRIHGTNDPSTIGKFVSSG 201 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C +T+ ++++F Sbjct: 202 CIRLTNEDVEDLFGRTGIGTRVVV 225 >gi|46192901|ref|ZP_00005863.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 254 Score = 123 bits (308), Expect = 3e-27 Identities = 25/158 (15%), Positives = 44/158 (27%), Gaps = 23/158 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 V +E+ P P I + R+L + Y I GL G + + Sbjct: 60 VRQEVAYNGPEKPGTIVVDTFARRLYYVTEEGRAM-----RYAIAVGRAGLAFRGNAKVQ 114 Query: 59 GDFQSPEGFYSVQPNQLNPDS--RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA-- 109 + P + + P+ Y + G N Y + IHG Sbjct: 115 RKREWPSWQPTANMIRTQPEMYAPYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQ 174 Query: 110 ------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC + + +++ V + Sbjct: 175 NASIGHATSAGCIRLFNQDAIDLYGRVNLGTPVKVRTE 212 >gi|68213573|ref|ZP_00565404.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 417 Score = 123 bits (308), Expect = 4e-27 Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 17/179 (9%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 P + + + +L +++ + + L+ Y I G K EGD ++P G Y Sbjct: 150 MSPEQRYAVVVDTTKSRLYVYQNRDSQLHHLV-DYYITMGKNG-SEKFTEGDKRTPLGIY 207 Query: 69 SVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---------VSVGCYA 117 PD A + +PN D+ HG G + +HG S GC Sbjct: 208 IADKKLEHKLPDFYGEAAYPLNYPNPLDKRHGKKGHGIWLHGTPQDVYSRPPKASDGCVV 267 Query: 118 MTDAQIDEIFAFVRDA-FVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYD 175 + + I + ++ + I P +A +R + W++ D Sbjct: 268 IANPDIKALAPVLQQGATPVIISNDLQWITP---QEAEQRRQALDQALEQWRRDWESQD 323 >ErfK_YbiS_YhnG_Q8FX96_108-243_PF03734.4 Length = 136 Score = 123 bits (308), Expect = 4e-27 Identities = 23/141 (16%), Positives = 37/141 (26%), Gaps = 19/141 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 P I I R L L +A + Y + G K R + P Sbjct: 1 EKPGTIVIDTASRFLYLVQADGKA-----RRYGVGVGKQGFSWKGTQRISRKAEWPTWTP 55 Query: 69 SVQP--NQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYA 117 + + ++ G N Y G IHG +S GC Sbjct: 56 PSEMIARERKKGRFLPARMDGGINNPLGARALYLGSTLYRIHGTNQPWTIGKAMSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + + +++ Sbjct: 116 MRNEDVTDLYERTPVGTRVVV 136 >gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Brucella suis 1330] Length = 237 Score = 122 bits (307), Expect = 5e-27 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 24/157 (15%) Query: 1 PVSKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P + G P I I ++R L L + + Y I GL G Sbjct: 85 PKFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTA-----RRYGIAVGKQGLEFQGKAT 139 Query: 57 REGDFQSPEGFYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGA 109 + P + + + +P R+ ++ G N Y Y+ IHG Sbjct: 140 ISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGT 199 Query: 110 --CV------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC+ M + + +++ V Sbjct: 200 VQPWTIGSSASNGCFRMINEDVMDLYDRVTLGTEVVV 236 >gi|49239475|emb|CAF25827.1| hypothetical protein [Bartonella quintana str. Toulouse] Length = 258 Score = 122 bits (307), Expect = 5e-27 Identities = 26/158 (16%), Positives = 42/158 (26%), Gaps = 25/158 (15%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + SP + I +E L L Y I GL G Sbjct: 75 PKFWRQQVIYYTSYSPGTLVIDTQECFLYLIGENGKAL-----RYGIGVGKEGLAFEGEG 129 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT-----GKYLMIHG 108 + + P + P+ +L + G N Y IHG Sbjct: 130 TVQRKRRWPSWAPTAAMMAREPERYGHLGKGMPPGPDNPLGARALYLFRNGKDTLFRIHG 189 Query: 109 ACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + S GC + + I +++ V + Sbjct: 190 SNESWSIGRAISSGCIRLLNQDIIDLYDRVPNGARVVV 227 >gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Bartonella henselae str. Houston-1] Length = 249 Score = 122 bits (306), Expect = 5e-27 Identities = 25/158 (15%), Positives = 40/158 (25%), Gaps = 25/158 (15%) Query: 1 PVSKELKQQL--PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + P + I +E L L Y I GL G Sbjct: 64 PKFWRQQVIYYTSYPPGTLVIDTQECFLYLIGENGRAL-----RYGIGVGKEGLAFEGEG 118 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT-----GKYLMIHG 108 + + P + P+ +L + G N Y IHG Sbjct: 119 VVQRKRRWPNWAPTAAMMAREPERYGHLGRGMPPGPDNPLGARALYLFKNGQDTLFRIHG 178 Query: 109 ACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + S GC + + I +++ V Sbjct: 179 SHESWSIGHAISSGCIRLLNQDIIDLYDRVPIGSRVVV 216 >ErfK_YbiS_YhnG_Q92KL8_110-245_PF03734.4 Length = 136 Score = 122 bits (306), Expect = 5e-27 Identities = 25/141 (17%), Positives = 38/141 (26%), Gaps = 19/141 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I R L L + Y + G G R + P Sbjct: 1 EKPGTIVIDTNNRFLYLVTGNGEA-----RRYGVGVGKPGFEWAGEHRITRKAEWPNWTP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGACV--------SVGCYA 117 + +YL ++ G N Y G IHG S GC Sbjct: 56 PQEMIAREAARGHYLPARMDGGPENPLGARAMYLGSTLYRIHGTNAPWTIGYGVSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + + +++ V+ Sbjct: 116 MRNEDVVDLYERVKVGTKVIV 136 >gi|62289117|ref|YP_220910.1| lipoprotein, hypothetical [Brucella abortus biovar 1 str. 9-941] Length = 206 Score = 122 bits (306), Expect = 6e-27 Identities = 24/155 (15%), Positives = 42/155 (27%), Gaps = 22/155 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + +K P I + E+ L L + Y I G G R Sbjct: 56 RRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAV-----RYGIGVGRRGFEWSGTARVA 110 Query: 59 GDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGK-----YLMIHGAC-- 110 + P + P+ +Y ++ G N Y +HG Sbjct: 111 MKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALYLYNKGGDTGYRLHGTPEW 170 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC + + I +++ V Sbjct: 171 WSIGKAMSSGCIRLMNQDIIDLYNRVEQGAKVVVK 205 >gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 197 Score = 122 bits (306), Expect = 6e-27 Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 19/151 (12%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGD 60 + + + +P I + ER L L + Y I G + + Sbjct: 52 QMVYFRTTEAPGTIIVQTSERYLYLVQGNNRAL-----RYGIGVGREGFTWQGLLKISRK 106 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------V 111 + P+ + Q P ++A G N Y G IHG + Sbjct: 107 AEWPDWVPPPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNRPDTIGTAI 164 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC+ + +A + +++A V Sbjct: 165 SSGCFRLVNADVMDLYARVPVGTKVVVRQRP 195 >ErfK_YbiS_YhnG_Q6NAN8_135-266_PF03734.4 Length = 132 Score = 121 bits (305), Expect = 9e-27 Identities = 24/139 (17%), Positives = 36/139 (25%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I + L L + Y + G G K + P Sbjct: 1 EKAGTIVIDTPNKFLYLVQGDGKAL-----RYGVGVGRPGFTWSGVKTITAKREWPAWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHG--------ACVSVGCYAMT 119 + PD ++ G N Y G IHG VS GC M Sbjct: 56 PKEMLARRPDLPRHME--GGPANPLGARAMYLGSSLYRIHGSNEPWTIGTNVSSGCIRMR 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +++ V Sbjct: 114 NEDVIDLYGRVGVGTKVVV 132 >ErfK_YbiS_YhnG_Q6N3X7_92-223_PF03734.4 Length = 132 Score = 121 bits (305), Expect = 9e-27 Identities = 23/139 (16%), Positives = 37/139 (26%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + L Y I G G K + P+ Sbjct: 1 EAPGTIVVDTPNTYLYYVLGGGRAI-----RYGIGVGRDGFTWSGVKSVARKAEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGACV--------SVGCYAMT 119 + P ++A G N Y G IHG S GC +T Sbjct: 56 PPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTVYRIHGTNAPSTIGTHVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + ++++ V Sbjct: 114 NEDVKDLYSRVAVGAKVIV 132 >gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 360 Score = 121 bits (304), Expect = 1e-26 Identities = 32/206 (15%), Positives = 46/206 (22%), Gaps = 49/206 (23%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP +P I I E +L + + YPI G + Sbjct: 85 PSQMLLPDTPRQGIVINLAELRLYYFPKGKNN----VIVYPIGIGQLG---------RNT 131 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGY---TGKYLM 105 P SV +P I G N + Sbjct: 132 PVMTTSVSQLIKDPTWTPTKNIRKHYAEQGVILPAVVPAGPENPMGAFALRLAAGRGEYL 191 Query: 106 IHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQR 157 IHG S GC + I+ +F V + V Sbjct: 192 IHGTNADFGIGMRVSSGCIRLRPDDIETLFNAVPRGTRVQIINEAVKY---------SVE 242 Query: 158 HRNSPNYDFWKQLKPGYDYFEQTRKP 183 + + L D QT Sbjct: 243 PSGKRYIEVHQPLSKKEDDNPQTLPI 268 >gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 193 Score = 121 bits (304), Expect = 1e-26 Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 20/141 (14%) Query: 1 PVSKE-LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKR 56 P+ +E + + +P I I ER+L L + Y I G G R Sbjct: 48 PIPRETVMFEGNYAPGTIVISTRERRLYLVQGDGTAL-----RYGIGVGRDGFRWSGTHR 102 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC----- 110 + P Q + PD Y+A N Y G IHG+ Sbjct: 103 ITAKREWPGWTPPAQMLRRRPDLPRYMAGGE--DNPLGARAMYLGSTLYRIHGSNEPETI 160 Query: 111 ---VSVGCYAMTDAQIDEIFA 128 VS GC+ MT+ + +++ Sbjct: 161 GQAVSSGCFRMTNDDVKDLYD 181 >gi|26988184|ref|NP_743609.1| hypothetical protein PP1451 [Pseudomonas putida KT2440] Length = 184 Score = 121 bits (303), Expect = 1e-26 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 26/157 (16%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 +Q + + + K ER+L+L + +K+Y I G K REGD Sbjct: 34 TPSPSQQAMQPLIDKVLVIKSERRLQLISR-----GEPLKTYRISLGKQPKGAKEREGDK 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC------ 110 ++PEG Y + + R+ LA++I +PN D A G +MIHG Sbjct: 89 KTPEGLYWLDWRKQ--SDRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYP 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC AM + + E++ VRD + Sbjct: 147 EWYFHTLDWTDGCIAMRNRDMQEVWDLVRDGTLIEIR 183 >gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 121 bits (303), Expect = 1e-26 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 26/191 (13%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 V + + +P + I + L Y I G G + Sbjct: 111 VRQVVDYASHQTPGTVIIDTQNTFLYFVLNDRQAM-----RYGIGVGREGFAWSGEQTVA 165 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC------- 110 + P+ + P ++A G N Y G IHG Sbjct: 166 RKAEWPDWHPPAEMVSRQPYLPRFMAGGPG--NPLGARAMYLGETEYRIHGTNKPDTIGK 223 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTD-------ANMQRHRNSP 162 VS GC +T+ + +++ V+ + P + + N P Sbjct: 224 RVSSGCIRLTNEDVVDLYERVKVGAKVIVLPATAARRPSQGAPPDAASRSPDPASPSNRP 283 Query: 163 NYDFWKQLKPG 173 + + L G Sbjct: 284 SAANAQMLSSG 294 >ErfK_YbiS_YhnG_Q8UHL1_122-257_PF03734.4 Length = 136 Score = 121 bits (303), Expect = 1e-26 Identities = 25/141 (17%), Positives = 37/141 (26%), Gaps = 19/141 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I R L L A + Y + G G + + P Sbjct: 1 EKPGTIVIDTPNRFLYLVLADGKA-----RRYGVGVGKPGFEWAGTHKVTRKAEWPSWTP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYA 117 + +YL + G N Y G IHG S GC Sbjct: 56 PKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + + +++ V Sbjct: 116 MRNEDVTDLYERVNVGTRVIV 136 >gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitrosomonas europaea ATCC 19718] Length = 326 Score = 121 bits (303), Expect = 1e-26 Identities = 34/202 (16%), Positives = 61/202 (30%), Gaps = 49/202 (24%) Query: 5 ELKQQLPGS-PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ +P + + + I E +L + G+ I ++P+ D+ + Sbjct: 90 PLRFIIPQAERIGLVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---------DWNT 140 Query: 64 PEGFYSVQPNQLNPDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMI 106 P G ++ Q +P ++ G N R Y G +I Sbjct: 141 PLGRTTIVRKQKDPTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYALYLGLPGYLI 200 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 H V+ GC + I+E+F V + V + Q Sbjct: 201 HSTNKPFGVGMRVTHGCMRLYPEDIEELFNLVPTGTPVQIVNQPVKL--------GWQE- 251 Query: 159 RNSPNYDFWKQLKPG----YDY 176 N + L+ YDY Sbjct: 252 -NLLFIELHPPLEEDDTTPYDY 272 >gi|71282503|ref|YP_270846.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Colwellia psychrerythraea 34H] Length = 303 Score = 121 bits (303), Expect = 1e-26 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 33/198 (16%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP----KRREGDFQSPEGFY 68 S I I E +L + + + +P+ GL + P+ Sbjct: 97 SRKGIVINLPELRLYYYSPEENK----VHVFPVGIGRQGLSTPLTSTVIGEKRKDPDWRP 152 Query: 69 SVQPNQLN---PDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCY 116 + + + + + G N + + G +IHG+ S GC Sbjct: 153 TKEMQKRHFAEHGEYLPDVVPAGPNNPFGKYALRLGTSEYLIHGSNKRFGIGMRASSGCI 212 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYDY 176 M D I +F V + V +M+ N + + +QL Sbjct: 213 RMYDDDIKWLFDNVPVNTKVRVVNQPV-----KMSFENGDK----QLIEIHQQLS----D 259 Query: 177 FEQTRKPPTVSVCNGRYV 194 E T+ ++ R+V Sbjct: 260 LETTKGNVILTKAMQRFV 277 >gi|56413653|ref|YP_150728.1| putative LysM domain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 333 Score = 121 bits (303), Expect = 1e-26 Identities = 38/207 (18%), Positives = 56/207 (27%), Gaps = 38/207 (18%) Query: 1 PVSKE-------LKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K + LP +P + + E +L + ++ YPI GL Sbjct: 74 PVPKPGTLITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENR----VQVYPIGIGLQGL 129 Query: 53 G----PKRREGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGY---TGKY 103 R +P + Q + + L I G N R Sbjct: 130 ETPVMDTRIGQKIPNPMWTPTAGIRQRSLERGITLPPVIPAGPNNPLGRYALRLAHGNGE 189 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANM 155 +IHG S GC M I +FA VR + V Sbjct: 190 YLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKF---------S 240 Query: 156 QRHRNSPNYDFWKQLKPGYDYFEQTRK 182 + + L P + QT Sbjct: 241 VEPNGIRYVEVHRPLSPEEEQNVQTMP 267 >gi|71548630|ref|ZP_00668854.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 323 Score = 121 bits (303), Expect = 2e-26 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 35/166 (21%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ +P + + I E +L + + G+ I ++P+ D+ + Sbjct: 90 PLRFIIPQAERTGLVINLPEMRLYYFPKPIKGQKPEIITHPVSIGRM---------DWNT 140 Query: 64 PEGFYSVQPNQLNPDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMI 106 P G ++ Q +P ++ G N + Y G +I Sbjct: 141 PLGKTTIVRKQKDPTWTPPQSLRKEAIEEGRPPLLDVVPAGPDNPLGKYALYLGLPGYLI 200 Query: 107 HGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 HG V+ GC + I+E+F + + + Sbjct: 201 HGTNKPLGVGMRVTHGCMRLYPEDIEELFNLIPTGTPVQIVNQPIK 246 >gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099] Length = 163 Score = 120 bits (302), Expect = 2e-26 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 26/147 (17%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 22 AEKVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYML 76 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------V 111 NP+S + +I+I +PNA D A G +MIHG Sbjct: 77 DW--RNPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDW 134 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+TD+ +DEI+A V D Sbjct: 135 TDGCIAVTDSDMDEIWAMVADGTPIEI 161 >gi|69930361|ref|ZP_00627101.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 172 Score = 120 bits (302), Expect = 2e-26 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 19/150 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 E+ + +P I + +ER+L L YP+ G G E Sbjct: 26 RPDEVSYRSDYAPGTILVKTKERRLYLIVDSDRAI-----RYPVGVGKAGKQWAGTAHIE 80 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--LMIHGAC------ 110 G ++ P + + NP +A N A IHG Sbjct: 81 GKYRDPAWAPPAEVKRDNPRIPDVIA-GGSPSNPMGVAAMTLSGGGQYAIHGTNRPQTVG 139 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + ID+++ V Sbjct: 140 HFVSYGCIRMYNNDIDDLYRRVSIGTPVVV 169 >ErfK_YbiS_YhnG_Q6N230_94-225_PF03734.4 Length = 132 Score = 120 bits (301), Expect = 2e-26 Identities = 22/139 (15%), Positives = 35/139 (25%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I L Y + G G + + P+ Sbjct: 1 EPAGTIVIDTANTYLYYVLGGGRAI-----RYGVGVGREGFTWAGVQTITRKAEWPDWRP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC +T Sbjct: 56 PAEMIARQPYLPRFMAGGPG--NPLGARAMYLGSTTYRIHGTNDPSTIGKFVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + ++++F Sbjct: 114 NEDVEDLFGRTGIGTRVVV 132 >gi|66857904|ref|ZP_00401942.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C] Length = 285 Score = 120 bits (301), Expect = 3e-26 Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 25/191 (13%) Query: 1 PVSKELKQQLPG--SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGP 54 P+ LP +P I + E +L L +YP+ LG Sbjct: 70 PLVVPAAWILPPSAAPGSIVVNLSEMRLYLLPGGGAAP----VTYPVGIGKDRAKTPLGS 125 Query: 55 KRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGACV-- 111 G +P + + +P + G N ++IHG Sbjct: 126 FTVIGKTVAPTWYPPASMRRDDPTLP--DRVPPGPDNPLGTHALRLSAGSILIHGTDEPF 183 Query: 112 ------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI--YPFRMTDANMQRHRN--S 161 S GC + I +F V V I R+ Sbjct: 184 GIGRKFSHGCVRLYPEDIPRLFEVVPLKTPVRMVREPVKIGVRGSRVVVEAHDDPDARVD 243 Query: 162 PNYDFWKQLKP 172 + +QL+ Sbjct: 244 LRAEAQRQLER 254 >ErfK_YbiS_YhnG_Q89VM1_60-191_PF03734.4 Length = 132 Score = 119 bits (300), Expect = 3e-26 Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I I ER L L + Y I G G + P+ Sbjct: 1 ETPGTIIISTAERHLYLVQPGGRAI-----RYGIGVGRDGFQWQGLVNITNKKEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 + Q P ++A G N Y G IHG VS GC+ + Sbjct: 56 PPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGTTVYRIHGTNRPDTIGTKVSSGCFRLV 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +++ V Sbjct: 114 NNDVADLYDRVPVGTKVVI 132 >gi|68190182|gb|EAN04842.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 199 Score = 119 bits (300), Expect = 3e-26 Identities = 23/158 (14%), Positives = 43/158 (27%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P ++ + +P I + E L + Y + GL G Sbjct: 47 PRYRKQRVPYDGGEAPGTIVVNTSEFYLYHVEEGGWAM-----RYGVGVGEQGLTLKGKA 101 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA 109 + + P + + P +Y + G N Y + IHG Sbjct: 102 KIGRKAEWPSWTPTANMLRRKPHLVQYAGGVEGGLNNPLGARALYLYRGGRDTMFRIHGT 161 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC +T+ I +++ Sbjct: 162 NEPWSIGNAMSSGCIRLTNDDIVDLYERTPVGATVVVI 199 >ErfK_YbiS_YhnG_Q92PX9_54-192_PF03734.4 Length = 139 Score = 119 bits (300), Expect = 3e-26 Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFY 68 SP I + EER L + Y I G G + + P Sbjct: 1 ESPGTIVVNTEERYLYYVQGGGSAV-----RYGIGVGEEGRTLKGRAKIGRKAEWPSWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVG 114 + + P +Y ++ G N A Y + +HG VS G Sbjct: 56 TANMIRRKPHLAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQAVSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C +T+ I ++++ Sbjct: 116 CIRLTNDDIVDLYSRTPVGATVLI 139 >ErfK_YbiS_YhnG_Q89FR3_116-247_PF03734.4 Length = 132 Score = 119 bits (299), Expect = 4e-26 Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I I L Y I G G + + P+ Sbjct: 1 EAPGTIIIDTPNTYLYYVLGNGQAV-----RYGIGVGRDGFTWSGVQSVTKKAEWPDWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLM-IHGACV--------SVGCYAMT 119 + P ++A G N Y G + IHG S GC +T Sbjct: 56 PPEMIARQPYLPRHMAGGPG--NPLGARAMYLGGTIYRIHGTNAPDTIGKHVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + ++++ V Sbjct: 114 NDDVTDLYSRVNVGTKVIV 132 >ErfK_YbiS_YhnG_Q89BG8_76-215_PF03734.4 Length = 140 Score = 119 bits (299), Expect = 4e-26 Identities = 25/145 (17%), Positives = 39/145 (26%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I +L L + Y I GL G + P Sbjct: 1 EPVGTIVIDTAAHQLYLVEGDGKAM-----RYGIGVGKDGLAFAGTATIRRKAEWPHWTP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-----LMIHGA--------CVSV 113 + P +LA + G N Y + IHG VS Sbjct: 56 TKNMMNREPARYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPETIGRAVSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I ++++ V+ Sbjct: 116 GCIRLINQDIIDLYSRVKIGSRVVV 140 >gi|15075086|emb|CAC46643.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti] Length = 232 Score = 119 bits (299), Expect = 4e-26 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 22/154 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RRE 58 + + + P I I + L L + Y I G G R Sbjct: 73 RRQMVPFRTAEVPGTIIIDGNQHFLYLVQPGGQAI-----RYGIGVGREGFGWAGIVRVG 127 Query: 59 GDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA--- 109 + P + +P++ ++ + G N Y + IHG Sbjct: 128 RTAEWPTWTPPPEMVARDPNAAKWAGGMPGGPDNPLGARALYLYEGDNDTIYRIHGTVEP 187 Query: 110 -----CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + I ++ + V Sbjct: 188 WTIGLDVSSGCIRMNNDDIIDLHSRVGVGAKVIV 221 >gi|9392598|gb|AAF87210.1| unknown [Rhizobium leguminosarum bv. viciae] Length = 227 Score = 119 bits (298), Expect = 5e-26 Identities = 26/163 (15%), Positives = 41/163 (25%), Gaps = 29/163 (17%) Query: 1 PVSKE--LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + + Q P I + ER L A Y I G G Sbjct: 69 PQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAM-----RYGIGVGKQGFAWAGTA 123 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIH 107 + P + PD Y+ + G N Y +H Sbjct: 124 YVAWKQEWPNWHPPKEMAVRRPDLAKYVEDGMGPGLSNPLGARAMYLFNEDGKDTLFRLH 183 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDA---FVGGQP 139 G S GC + + + ++++ VR Sbjct: 184 GTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPGKGTSKVVVI 226 >gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] Length = 167 Score = 119 bits (298), Expect = 5e-26 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 26/150 (17%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 L G + + K ERKL L ++KSY + GPK EGD ++PEGFY Sbjct: 23 SLEGKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFY 77 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------------- 110 + + + + Y L+++I +PNA D A G +MIHG Sbjct: 78 WIDWRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTL 135 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC AM + + E+++ V+D + Sbjct: 136 DWTNGCIAMNNTDMREVWSVVKDGTLIEIR 165 >gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Bradyrhizobium japonicum USDA 110] Length = 272 Score = 119 bits (298), Expect = 6e-26 Identities = 24/147 (16%), Positives = 38/147 (25%), Gaps = 19/147 (12%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + I I L Y + G G + Sbjct: 90 QVVSFDRSEPAGTIVIDTGNTYLYYVLGNGRAI-----RYGVGVGREGFTWSGVQSVSRK 144 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK-YLMIHGAC--------V 111 + P+ + P ++A G N Y G IHG V Sbjct: 145 AEWPDWHPPAEMIARQPYLPRFVAGGPG--NPLGARAMYLGSSEYRIHGTNDPTTIGKFV 202 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC MT+ + ++F+ V Sbjct: 203 SSGCIRMTNEDVTDLFSRVNIGARVVV 229 >ErfK_YbiS_YhnG_Q98C34_66-204_PF03734.4 Length = 139 Score = 118 bits (297), Expect = 6e-26 Identities = 18/144 (12%), Positives = 37/144 (25%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + + + L + Y I G G + P Sbjct: 1 EKPGTIIVDTQNKFLYFVEDDGRAI-----RYGIGVGREGFEWHGTAHIALKREWPTWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGK-----YLMIHGAC--------VSVG 114 + + P+ ++ + G N Y +HG+ +S G Sbjct: 56 PREMIKRQPELAKFADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNSIGKAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C + + I +++ Sbjct: 116 CIRLMNQDIIDLYDRTSVGAKVIV 139 >ErfK_YbiS_YhnG_Q92R37_35-174_PF03734.4 Length = 140 Score = 118 bits (297), Expect = 6e-26 Identities = 28/145 (19%), Positives = 41/145 (28%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P + I E R L L + Y I GL G R + P Sbjct: 1 EPPGTVVIDTENRFLYLVQGGGMAL-----RYGIGVGKAGLEFEGEARVGRKAEWPRWTP 55 Query: 69 SVQPNQLNPDSRYYLAIN--IGFPNAYDRAHGYTGKY-----LMIHGA--------CVSV 113 + P+ LA G N Y + IHG VS Sbjct: 56 TSDMVAREPERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHGTTEAWSIGKAVSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I ++++ V + Sbjct: 116 GCIRLFNPDIIDLYSRVPEGSRVVV 140 >ErfK_YbiS_YhnG_Q985W6_23-161_PF03734.4 Length = 139 Score = 118 bits (297), Expect = 7e-26 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +R+ K ER+LEL G+ ++++SY I S + K +EGD ++PEG Y + Sbjct: 1 EKVDLVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYMLD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 NP+S + +I+I +PNA D A G +MIHG + Sbjct: 56 W--RNPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+TD+ +DEI+A V D Sbjct: 114 DGCIAVTDSDMDEIWAMVADGTPIEI 139 >gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesorhizobium loti MAFF303099] Length = 277 Score = 118 bits (296), Expect = 8e-26 Identities = 25/159 (15%), Positives = 45/159 (28%), Gaps = 25/159 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + P I + L L + Y + G G + Sbjct: 83 LRQIVPDPTGQKPGTIIVDTTGHFLYLVRPGGQAI-----RYGVGLGRAGFEWSGDAVVQ 137 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYTGKY-----LMIHGA 109 + P+ + P+ + Y A N G P N Y + +HG+ Sbjct: 138 WKQKWPKWTPPDEMIARQPELKPYSADNGGMPGGLKNPLGARALYLFQGNVDTLYRLHGS 197 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC + + I +++ V S Sbjct: 198 PEWKSIGKSVSSGCVRLMNQDIIDLYDRVPSKTPVIVTS 236 >ErfK_YbiS_YhnG_Q6N0G6_60-191_PF03734.4 Length = 132 Score = 118 bits (296), Expect = 8e-26 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 +P I + ER L L + Y I G + + + P+ Sbjct: 1 EAPGTIIVQTSERYLYLVQGNNRAL-----RYGIGVGREGFTWQGLLKISRKAEWPDWVP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 + Q P ++A G N Y G IHG +S GC+ + Sbjct: 56 PPEMIQRQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNRPDTIGTAISSGCFRLV 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 +A + +++A V Sbjct: 114 NADVMDLYARVPVGTKVVV 132 >gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 187 Score = 118 bits (295), Expect = 1e-25 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 26/146 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y I G K +EGD ++PEGFY + Sbjct: 48 PIDKVLVLKSARQLQLISG-----GEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDW 102 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A + G +M+HG + Sbjct: 103 RK--PSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN 160 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+ + + EI+ V+D + Sbjct: 161 GCIALKNNDMREIWDLVKDGTMIEIR 186 >gi|42522629|ref|NP_968009.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100] Length = 332 Score = 118 bits (295), Expect = 1e-25 Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 23/178 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S I + KE+RKL +++ + I YP G G K + D ++PEG Y +Q Sbjct: 48 SRYVILVDKEQRKLSVFERNGEQIQK-ITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQE 105 Query: 73 NQLNP----DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------SVGCYAMTDA 121 P LA +PN +D+ TG + +H S GC + + Sbjct: 106 RLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRND 165 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYP----FRMTDANMQRHRNSPNYDFWKQLKPGYD 175 I ++ +++ + I+ ++ + +R S + W+Q D Sbjct: 166 VIKKLADYIKLG------ETPILIFDHVNYVSKSEHDKRRQDLSRFVESWRQAWENQD 217 >ErfK_YbiS_YhnG_Q987T4_107-242_PF03734.4 Length = 136 Score = 117 bits (294), Expect = 2e-25 Identities = 25/141 (17%), Positives = 39/141 (27%), Gaps = 19/141 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I + L L + + Y + G G + + P+ Sbjct: 1 QKPGTIVIDTTQNFLYLVEKNGKA-----RRYGVGTGKPGFEWSGTHKITNKREWPDWRP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYA 117 Q + YL + G N Y G IHG VS GC Sbjct: 56 PAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIR 115 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + + +++ V Sbjct: 116 MRNEDVVDLYERVNVGTTVEV 136 >gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 172 Score = 117 bits (293), Expect = 2e-25 Identities = 31/151 (20%), Positives = 47/151 (31%), Gaps = 19/151 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + Q +P I + ER+L L YP+ G G R E Sbjct: 26 RPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRAL-----RYPVGVGRAGKQWSGAARIE 80 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY--LMIHGAC------ 110 G +++P + + NP + N A IHG Sbjct: 81 GKYRNPAWAPPAEVKRDNPR-IADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSIG 139 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M +A ID+++ V Sbjct: 140 RFVSYGCIRMYNADIDDLYRRVSVGTPVVVT 170 >ErfK_YbiS_YhnG_Q8UCZ2_64-202_PF03734.4 Length = 139 Score = 117 bits (293), Expect = 2e-25 Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 22/143 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 + + R+L + Y + GL G + P + Sbjct: 2 PAGTVVVDTPARRLYYVMGEGRAM-----RYGVGVGRQGLALKGDAYIGRKSEWPSWTPT 56 Query: 70 VQPNQLNP-DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGC 115 + +P + ++ + G N Y + +HG +S GC Sbjct: 57 ANMMRRDPRNLKFAGGMPGGPNNPLGARALYLYRGGNDTMFRLHGTNQPQSIGHAMSSGC 116 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 M + I ++++ V Sbjct: 117 IRMLNHDIIDLYSRVPVGSRVVV 139 >ErfK_YbiS_YhnG_Q6N3T2_113-244_PF03734.4 Length = 132 Score = 117 bits (293), Expect = 2e-25 Identities = 21/139 (15%), Positives = 36/139 (25%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I + L Y + G G ++ + P+ Sbjct: 1 EPAGTIVVDTANTHLYYVLGNGRAI-----RYGVRVGRDGFTWNGVQKISRKAEWPDWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 + + P ++A G N Y G IHG VS GC M Sbjct: 56 PAEMIERQPYLPRFMAGGPG--NPMGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGML 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + ++F + Sbjct: 114 NDDVSDLFERAKVGTRVVV 132 >ErfK_YbiS_YhnG_Q89E58_121-252_PF03734.4 Length = 132 Score = 116 bits (292), Expect = 2e-25 Identities = 23/139 (16%), Positives = 39/139 (28%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P + I + L Y I G G + + P+ Sbjct: 1 QTPGTVIIDTQNTFLYFVLNDRQAM-----RYGIGVGREGFAWSGEQTVARKAEWPDWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC +T Sbjct: 56 PAEMVSRQPYLPRFMAGGPG--NPLGARAMYLGETEYRIHGTNKPDTIGKRVSSGCIRLT 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +++ V+ Sbjct: 114 NEDVVDLYERVKVGAKVIV 132 >gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 221 Score = 116 bits (292), Expect = 2e-25 Identities = 22/162 (13%), Positives = 42/162 (25%), Gaps = 25/162 (15%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRR 57 + +P I + + L Y + L G R Sbjct: 56 FRRAIVDYHRKEAPGSILVDSDNHYLYYVLDNGKAI-----RYGVTVGEEALAFSGIARV 110 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P+ + ++ +A G N Y + IHG Sbjct: 111 GNKREWPDWIPTADIHKRMGGLPSRVA--GGPDNPLGARALYLYQGSKDTLFRIHGTNQP 168 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 +S GC MT+ +++ V+ + + S Sbjct: 169 EYIGTSISSGCIRMTNEDAIDLYDRVKVGTMVVVLEPRRSAR 210 >ErfK_YbiS_YhnG_Q89UE9_98-229_PF03734.4 Length = 132 Score = 116 bits (292), Expect = 3e-25 Identities = 24/139 (17%), Positives = 36/139 (25%), Gaps = 19/139 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 I I L Y + G G + + P+ Sbjct: 1 EPAGTIVIDTGNTYLYYVLGNGRAI-----RYGVGVGREGFTWSGVQSVSRKAEWPDWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK-YLMIHGAC--------VSVGCYAMT 119 + P ++A G N Y G IHG VS GC MT Sbjct: 56 PAEMIARQPYLPRFVAGGPG--NPLGARAMYLGSSEYRIHGTNDPTTIGKFVSSGCIRMT 113 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + ++F+ V Sbjct: 114 NEDVTDLFSRVNIGARVVV 132 >gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str. Bath] Length = 361 Score = 116 bits (292), Expect = 3e-25 Identities = 32/166 (19%), Positives = 51/166 (30%), Gaps = 37/166 (22%) Query: 7 KQQLPGSPV-YIRIFKEERKLELWK-AKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + LP +P I + E +L + A G + + +YPI D++SP Sbjct: 87 QFILPDAPRNGIVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRM---------DWRSP 137 Query: 65 EGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHG 108 G V +P R +I G N + G +IHG Sbjct: 138 LGLTKVVAKVKDPVWRPPASIKAEHAKNGEILPDVVPAGPNNPLGQFAMRLGVPGYLIHG 197 Query: 109 AC----------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 V+ GC M + ++F V + V Sbjct: 198 TDQDKSYGIGMRVTHGCIRMYPEDVAKLFPEVAVGTPVNLVNQPVK 243 >gi|68189621|gb|EAN04286.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 187 Score = 116 bits (292), Expect = 3e-25 Identities = 25/167 (14%), Positives = 46/167 (27%), Gaps = 33/167 (19%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + +E+ +P I I + L L + Y + G G + + Sbjct: 21 LRQEVVDPTGEAPGSIVIDTSQHFLYLVRGGGRAM-----RYGVGLGREGFAWAGRAQID 75 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYL------------AINIGFPNAYDRAHGYTG----- 101 P+ + + P+ Y + G N Y Sbjct: 76 RKAMWPKWHPPAEMIERQPELEKYKTEYDKATNEWRGGMEPGIMNPLGARAMYLYQDGKD 135 Query: 102 KYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 IHG+ VS GC M + + +++ V + S Sbjct: 136 TLYRIHGSPEWWSIGKSVSSGCVRMINQDVIDLYDRVPEGTPVLVTS 182 >gi|69299486|ref|ZP_00621473.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 162 Score = 116 bits (291), Expect = 3e-25 Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 27/156 (17%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 ++ G PV I + K RK+ L +++ Y + +G K+ EGD ++ Sbjct: 14 PQIRRYNGPPVTSIVVNKGSRKMYLLNES-----KVLTEYKVGLGFAPVGHKQVEGDGRT 68 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC-------- 110 PEG Y + + NP S++YL++ I +PN+ DRAH + G + IHG Sbjct: 69 PEGTYLID--RRNPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRR 126 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+T+ +I+EI++ V + + + Sbjct: 127 AARVRDWTAGCIAVTNDEIEEIWSMVNNGTLITLRA 162 >gi|29654868|ref|NP_820560.1| LysM domain protein [Coxiella burnetii RSA 493] Length = 314 Score = 116 bits (291), Expect = 4e-25 Identities = 25/197 (12%), Positives = 46/197 (23%), Gaps = 48/197 (24%) Query: 5 ELKQQLPGSP-VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P I I +L + +YP+ ++ + Sbjct: 83 PTQYLLPPVPKEGIVINLAAMRLYYFPKGKN----YFYTYPVGIGR---------FNWST 129 Query: 64 PEGFYSVQPNQLNPDSRYYLA---------------INIGFPNAYDRAHGY-TGKYLMIH 107 P G + NP + + G N + +IH Sbjct: 130 PLGKLHIIQKIKNPVWVVPDSILRYRQENGDPVPKMMPSGPENPLGYYALRLSQPTYLIH 189 Query: 108 GACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G S GC + I +F V + + ++ Sbjct: 190 GTNDPSSVGRRSSAGCIHLYPEDIKALFGMVSVDTPVLIINQPYVV----------GQND 239 Query: 160 NSPNYDFWKQLKPGYDY 176 + LK + Sbjct: 240 GKLYLEAHLPLKEDHKE 256 >gi|15155831|gb|AAK86651.1| AGR_C_1541p [Agrobacterium tumefaciens str. C58] Length = 328 Score = 116 bits (291), Expect = 4e-25 Identities = 22/158 (13%), Positives = 44/158 (27%), Gaps = 25/158 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + +E+ Q +P I + + L L ++ Y + G G + + Sbjct: 176 LRQEVSYQTAEAPGTIVVDTRQHFLYLVQSGGKAI-----RYGVGLGRDGYAWSGRGKIQ 230 Query: 59 GDFQSPEGFYSVQPNQLNPD----SRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGA 109 + P + + P+ S + G N Y +HG Sbjct: 231 WKAKWPRWTPPDEMVKRQPELTSISAANGGMTPGLNNPLGARALYIFKDGKDTLYRVHGT 290 Query: 110 CV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +++ V Sbjct: 291 PDWQSVGKATSSGCVRMLNQDVIDLYERVPQGAQIVVI 328 >gi|67156475|ref|ZP_00418068.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 172 Score = 116 bits (290), Expect = 4e-25 Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 30/159 (18%) Query: 4 KELKQQLPGS----PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 + PG I + K ERKL L Q +KSY + GPKRREG Sbjct: 20 SQASVLSPGEEQRIVDKILVVKSERKLMLLSR-----GQPLKSYKVSLGKRPTGPKRREG 74 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC---- 110 D ++PEG Y + + +Y L+++I +PN D+A G +M+HG Sbjct: 75 DQRTPEGLYWIDWRKA--SDKYNLSMHISYPNIRDQAQARAEGVPPGGMIMLHGTPLDEN 132 Query: 111 ----------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC AM + I E+++ V+D + Sbjct: 133 YPEWYFHGLDWTEGCIAMRNDDIREVWSLVKDGTLIEIR 171 >gi|68003264|ref|ZP_00535810.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 300 Score = 116 bits (290), Expect = 4e-25 Identities = 32/152 (21%), Positives = 44/152 (28%), Gaps = 32/152 (21%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P + + E +L I S+P+ S G ++P G Y V Sbjct: 102 PGRLVVNLSELRLYFVPEGGTPR---IVSFPVGTGSEGK---------ETPLGVYRVTEK 149 Query: 74 QLNPDSRYYLAI-----------NIGFPNAYDRAHGY-TGKYLMIHGAC--------VSV 113 + NP L+I G N T LMIHG VS Sbjct: 150 RANPAWHVPLSIRQERPRLPAVVPPGPDNPLGSHALRLTDDGLMIHGTNRPWGVGRNVSH 209 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 GC + I +F V V + Sbjct: 210 GCIRLYPEDIPVLFRLVSLGTPVAIVREPVKV 241 >gi|15155832|gb|AAK86652.1| AGR_C_1542p [Agrobacterium tumefaciens str. C58] Length = 261 Score = 116 bits (290), Expect = 4e-25 Identities = 19/157 (12%), Positives = 41/157 (26%), Gaps = 25/157 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + P + + R L + + Y + G G + Sbjct: 108 YRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAM-----RYGVGIGRDGFAWSGEGVIQ 162 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGA 109 + P+ + P+ Y + + G N Y +HG+ Sbjct: 163 WRQKWPKWTPPDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGS 222 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + + + +++ V Sbjct: 223 PEWNSIGKAVSSGCVRLMNQDVIDLYDRVPQKARVVV 259 >gi|37676018|ref|NP_936414.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 305 Score = 116 bits (290), Expect = 4e-25 Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 52/186 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ ++G + +P+ G +PE S++ + N Sbjct: 98 IVINLAELRLYYFEPELGK----VHVFPVGIGRVG---------RDTPEMVTSIREKRPN 144 Query: 77 PDSRYYLAI---------------NIGFPNAYD---RAHGYTGKYLMIHGAC-------- 110 P +I G N Y +IHG Sbjct: 145 PTWTPPASIRKEYREKGIELPKIIPAGPDNPLGEYALRLAYGSGDYLIHGTNKDFGIGLR 204 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI--YPFRMTDANMQRHRNSPNYDFWK 168 VS GC M I+ +F+ V + V + P R+ + + Sbjct: 205 VSAGCIRMEPKDIEWLFSQVDKGQRVKIINQPVKVSLEPGRI-----------VYLEAHE 253 Query: 169 QLKPGY 174 L Sbjct: 254 PLTRSN 259 >ErfK_YbiS_YhnG_Q6N9D2_60-191_PF03734.4 Length = 132 Score = 116 bits (290), Expect = 4e-25 Identities = 30/129 (23%), Positives = 43/129 (33%), Gaps = 19/129 (14%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I I ER+L L + Y I G G R + P Sbjct: 1 YAPGTIVISTRERRLYLVQGDGTAL-----RYGIGVGRDGFRWSGTHRITAKREWPGWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC--------VSVGCYAMT 119 Q + PD Y+A N Y G IHG+ VS GC+ MT Sbjct: 56 PAQMLRRRPDLPRYMAGGE--DNPLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMT 113 Query: 120 DAQIDEIFA 128 + + +++ Sbjct: 114 NDDVKDLYD 122 >gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO1461 [Pseudomonas syringae pv. tomato str. DC3000] Length = 208 Score = 116 bits (290), Expect = 5e-25 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 26/146 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 69 KIDKVLVLKSARQLQLISG-----GEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 123 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 124 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 181 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+ + + EI+ V+D + Sbjct: 182 GCIALKNNDMREIWDLVKDGTMIEIR 207 >gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 315 Score = 116 bits (290), Expect = 5e-25 Identities = 28/193 (14%), Positives = 46/193 (23%), Gaps = 46/193 (23%) Query: 7 KQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP +P I I E +L + K L PI +P Sbjct: 90 QLILPNTPHSGIVINNAEMRLYYYPEKKNTVIVL----PIAIG---------TIKNATPS 136 Query: 66 GFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKYLMIHGAC 110 + + ++ P ++ G N Y K IHG Sbjct: 137 HWITSITHKKKPIWIPTKSMRDEYIKHGEILPTIFPAGSSNPMGLYALYLEKNYAIHGTN 196 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP 162 ++ GC + I+ +F V + V Sbjct: 197 RNFGIGLRITRGCIRLRPEDIEYLFNIVPVGTKVQFINEPVKST---------VEKNGMR 247 Query: 163 NYDFWKQLKPGYD 175 + L D Sbjct: 248 YLEIHNPLSCNKD 260 >ErfK_YbiS_YhnG_Q6G2L0_77-216_PF03734.4 Length = 140 Score = 116 bits (290), Expect = 5e-25 Identities = 24/145 (16%), Positives = 38/145 (26%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P + I +E L L Y I GL G + + P Sbjct: 1 YPPGTLVIDTQECFLYLIGENGRAL-----RYGIGVGKEGLAFEGEGVVQRKRRWPNWAP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT-----GKYLMIHGACV--------SV 113 + P+ +L + G N Y IHG+ S Sbjct: 56 TAAMMAREPERYGHLGRGMPPGPDNPLGARALYLFKNGQDTLFRIHGSHESWSIGHAISS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + + I +++ V Sbjct: 116 GCIRLLNQDIIDLYDRVPIGSRVVV 140 >gi|39936673|ref|NP_948949.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 294 Score = 115 bits (289), Expect = 5e-25 Identities = 22/149 (14%), Positives = 39/149 (26%), Gaps = 19/149 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ I + L Y + G G ++ Sbjct: 103 RRQEVDFATKEPAGTIVVDTANTHLYYVLGNGRAI-----RYGVRVGRDGFTWNGVQKIS 157 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC------- 110 + P+ + + P ++A G N Y G IHG Sbjct: 158 RKAEWPDWHPPAEMIERQPYLPRFMAGGPG--NPMGARAMYLGSTVYRIHGTNQPSTIGK 215 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++F + Sbjct: 216 FVSSGCIGMLNDDVSDLFERAKVGTRVVV 244 >gi|67675669|ref|ZP_00472424.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 405 Score = 115 bits (289), Expect = 5e-25 Identities = 29/163 (17%), Positives = 50/163 (30%), Gaps = 34/163 (20%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP +P + + E +L + + GE Q +++Y I D+ + Sbjct: 145 PTRFILPDTPYEGVVVNIPEMRLYYYPPRKEGEPQRVETYAISVGRM---------DWST 195 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIH 107 P G + Q NP +I G N + G +IH Sbjct: 196 PLGETRITAKQENPPWYPPQSIIEEHAADGRELPDVVPPGPDNPLGKYKMRLGLPGYLIH 255 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 G V+ GC M ++ +F + S Sbjct: 256 GTNRPQGVGMRVTHGCIRMFPEDVEHLFGQLPVGTKVNLVSEP 298 >gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesorhizobium loti MAFF303099] Length = 263 Score = 115 bits (289), Expect = 5e-25 Identities = 22/158 (13%), Positives = 39/158 (24%), Gaps = 24/158 (15%) Query: 1 PVSKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---K 55 P P P I + E L L + Y + G G Sbjct: 79 PKFVRQIVADPTGEKPGTIVVDVSEHFLYLVRDGGKAI-----RYGVSLGKAGFGWTGSA 133 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYT-----GKYLMIHGA 109 + + P + Q P+ ++ + G + Y +HG Sbjct: 134 VVQARKKWPVWTPPPEMIQRRPELAKFKDGMPPGPQSPLGARALYLFRDGKDTMYRLHGT 193 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC + I ++++ V Sbjct: 194 PEWDSIGKNASSGCVRFMNQDIIDLYSRVNGPAQVFVR 231 >ErfK_YbiS_YhnG_Q8G317_66-204_PF03734.4 Length = 139 Score = 115 bits (289), Expect = 6e-25 Identities = 23/144 (15%), Positives = 40/144 (27%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + E+ L L ++ Y I G G R + P Sbjct: 1 EKPGTIIVDTREKFLYLIMSEGKAV-----RYGIGVGRRGFEWSGTARVAMKREWPTWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGK-----YLMIHGAC--------VSVG 114 + P+ +Y ++ G N Y +HG +S G Sbjct: 56 PSAMIKRQPELAKYRNGMDPGLRNPLGARALYLYNKGGDTGYRLHGTPEWWSIGKAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C + + I +++ V Sbjct: 116 CIRLMNQDIIDLYNRVEQGAKVVV 139 >gi|15073891|emb|CAC45532.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 242 Score = 115 bits (288), Expect = 7e-25 Identities = 25/158 (15%), Positives = 44/158 (27%), Gaps = 25/158 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ +P I + +R L L + Y + G G + Sbjct: 90 YRQEVGDPFGEAPGTIVVDTADRYLYLVQPGGRAM-----RYGVGLGREGFAWSGRGLIQ 144 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGA 109 + P+ + P Y A + G N Y +HG Sbjct: 145 WKQKWPKWTPPNEMIARQPVLAKYSADNGGMPPGLDNPLGSRALYIFQNGQDTLYRVHGT 204 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 VS GC M + + +++ VR+ Sbjct: 205 PEWQSIGKAVSSGCVRMVNQDVIDLYDRVRNKAPILVI 242 >gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 227 Score = 114 bits (287), Expect = 1e-24 Identities = 20/156 (12%), Positives = 41/156 (26%), Gaps = 25/156 (16%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRR 57 + +P I + + L Y + L G R Sbjct: 56 FRRAIVDYHRKEAPGTIVVDSDNHFLYYVLDNGKAL-----RYGVTVGEEALAFSGIARV 110 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P+ + ++ ++ G N Y + IHG Sbjct: 111 GNMAEWPKWTPTADIHKRIEGLP--SSVPGGIDNPLGARALYLYQGNKDTLFRIHGTNQP 168 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +S GC MT+ + +++ V+ + Sbjct: 169 EYIGASISSGCIRMTNEDVIDLYNRVKMGTIVVVLD 204 >gi|69926541|ref|ZP_00624012.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 354 Score = 114 bits (286), Expect = 1e-24 Identities = 23/149 (15%), Positives = 41/149 (27%), Gaps = 19/149 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ P + + L Y + G G ++ Sbjct: 154 RRQEVTFATKEPPGTLVVDTSNTYLYYILGNNRAI-----RYGVRVGRDGFTWAGVQKIS 208 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC------- 110 + P+ + + P ++A G N Y G IHG Sbjct: 209 RKAEWPDWHPPTEMIERQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNQPSTIGK 266 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++F V+ Sbjct: 267 FVSSGCIGMLNEDVSDLFDRVKVGTRVVV 295 >gi|15072991|emb|CAC41450.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 278 Score = 114 bits (286), Expect = 1e-24 Identities = 23/158 (14%), Positives = 39/158 (24%), Gaps = 24/158 (15%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + P I + R L Y I G G Sbjct: 126 QIVDYPTKERPGTIVVNTPSRFLYYVLPGGKAV-----RYGIGVGKQGFAWEGEAYVAWK 180 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC-- 110 + P + + P+ Y+ + G N Y +HG Sbjct: 181 QEWPTWHPPKEMAERKPEVARYVEAGMGPGISNPLGARALYLFNKEGRDTLFRLHGTPEW 240 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC + + I ++++ VR Q Sbjct: 241 SSIGTAASSGCIRLMNQDIMDLYSRVRPGRNARVVVQQ 278 >ErfK_YbiS_YhnG_Q886W4_69-206_PF03734.4 Length = 138 Score = 114 bits (286), Expect = 1e-24 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K R+L+L + +K+Y + G K +EGD ++PEGFY + Sbjct: 1 KIDKVLVLKSARQLQLISG-----GEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDW 55 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSV 113 + P + Y L+++I +PN D A G +MIHG + Sbjct: 56 RK--PSNNYNLSMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTN 113 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+ + + EI+ V+D + Sbjct: 114 GCIALKNNDMREIWDLVKDGTMIEI 138 >gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 158 Score = 114 bits (286), Expect = 1e-24 Identities = 27/139 (19%), Positives = 39/139 (28%), Gaps = 18/139 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYS 69 +P I + ER+L L YP+ G G +G + P+ Sbjct: 25 APGSIVVSTSERRLYLVNGDGTAI-----RYPVAVGKPGKQWSGATEIDGKYYQPDWSPP 79 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-GKYLMIHGAC--------VSVGCYAMTD 120 + + NP L N A G IHG S GC M + Sbjct: 80 REVKRDNPRLP-NLIRGGSPSNPMGAAAMTLRGGEYAIHGTNRPSSIGTYASYGCIRMYN 138 Query: 121 AQIDEIFAFVRDAFVGGQP 139 I ++ V Sbjct: 139 QDITDLIERVSVGTQVYVT 157 >gi|69933431|ref|ZP_00628633.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 213 Score = 114 bits (285), Expect = 2e-24 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 24/154 (15%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + K + + K R++ L ++K+Y I + LG K+ EGD + Sbjct: 66 PSKFKTYSGPPVTQVVVNKGARQMLLLNGN-----TVLKAYRIGLGNEPLGHKQFEGDGK 120 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------- 108 +PEG Y + + NPDSRY+L+I I +PN +D G + IHG Sbjct: 121 TPEGLYYID--RRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALS 178 Query: 109 ---ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC A+TDA++++I+A VRD Sbjct: 179 RLRQDWTAGCIAVTDAEVEDIYAMVRDGTPIMIT 212 >ErfK_YbiS_YhnG_Q9HXN9_26-164_PF03734.4 Length = 139 Score = 113 bits (284), Expect = 2e-24 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + + K ERKL L ++KSY + GPK EGD ++PEGFY + Sbjct: 1 GKVDKVLVLKSERKLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VS 112 + + + Y L+++I +PNA D A G +MIHG + Sbjct: 56 WRKTSNN--YNLSMHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC AM + + E+++ V+D + Sbjct: 114 NGCIAMNNTDMREVWSVVKDGTLIEI 139 >gi|61101934|ref|ZP_00377388.1| hypothetical protein ELI2629 [Erythrobacter litoralis HTCC2594] Length = 169 Score = 113 bits (284), Expect = 2e-24 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 25/156 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREG 59 P + + + P ++ + K +R L L++ + ++ Y + LG KR EG Sbjct: 21 PTPQPVSVEAPP-VDFLLVDKSDRTLALYR-----DGAEVRRYTGLQFGDAPLGHKRFEG 74 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC---- 110 D ++PEG Y++ NP+S YYL++ + +PNA DRA+ G + +HG Sbjct: 75 DERTPEGRYTID--TRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLP 132 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC A T+A++DE++ VRD Sbjct: 133 AGRMPGDWTDGCIAFTNAEMDELWRLVRDGTPIEIR 168 >gi|67153406|ref|ZP_00415151.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 317 Score = 113 bits (284), Expect = 2e-24 Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 30/182 (16%) Query: 5 ELKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREG 59 + LP P I I E ++ + ++ +YP+ G G R G Sbjct: 83 PTRYILPPGPREGIIINLAEYRMYYFPKDQN----VVHTYPLGIGREGWGSPVAETRITG 138 Query: 60 DFQSPEGFYS--VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC------ 110 + P + ++ + G N G +IHG+ Sbjct: 139 KIKDPAWYPPKSIREEHAADGDPLPTVVPAGPDNPLGPFKFTLGLSGYLIHGSNKKFGIG 198 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 VS GC+ M + + ++ V + F +++ + Sbjct: 199 MRVSHGCFRMLNHNVLQLADMVPVGTKVRIINEPYK---FGISE-------GKVYLEVHA 248 Query: 169 QL 170 L Sbjct: 249 PL 250 >gi|67926508|ref|ZP_00519704.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 140 Score = 113 bits (283), Expect = 3e-24 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 20/135 (14%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I ++K R++ L + + +++SY I +G K +EGD ++PEG Y++ + N Sbjct: 11 IVVYKSRREMLLLRGE-----SILRSYRIALGRDPIGHKFQEGDGRTPEGCYTID--RRN 63 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------ACVSVGCYAMTDAQI 123 P S+Y+L+++I +P A D G +MIHG + + GC A+++ ++ Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123 Query: 124 DEIFAFVRDAFVGGQ 138 DEI++ V D Sbjct: 124 DEIWSLVPDGTPIEI 138 >ErfK_YbiS_YhnG_Q985K6_93-234_PF03734.4 Length = 142 Score = 113 bits (283), Expect = 3e-24 Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + L L + Y + G G + + P+ Sbjct: 1 QKPGTIIVDTTGHFLYLVRPGGQAI-----RYGVGLGRAGFEWSGDAVVQWKQKWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFP----NAYDRAHGYTGKY-----LMIHGAC--------V 111 + P+ + Y A N G P N Y + +HG+ V Sbjct: 56 PDEMIARQPELKPYSADNGGMPGGLKNPLGARALYLFQGNVDTLYRLHGSPEWKSIGKSV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + I +++ V Sbjct: 116 SSGCVRLMNQDIIDLYDRVPSKTPVIV 142 >ErfK_YbiS_YhnG_Q98JD1_93-231_PF03734.4 Length = 139 Score = 113 bits (283), Expect = 3e-24 Identities = 23/144 (15%), Positives = 38/144 (26%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 P I I + L L + Y I G G + + P Sbjct: 1 EQPGTIIIDGNQHFLYLVQPGQQAI-----RYGIGVGRDGFGWAGIVKVGRMAEWPTWTP 55 Query: 69 SVQPNQLNPD-SRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVG 114 + +P + + G N Y + IHG VS G Sbjct: 56 PAEMVARDPKARPWANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEPWTIGLDVSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C M + I ++ + ++ Sbjct: 116 CIRMNNGDIIDLHSRIKVGAKVIV 139 >gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 371 Score = 113 bits (282), Expect = 3e-24 Identities = 24/149 (16%), Positives = 40/149 (26%), Gaps = 19/149 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 KE+ I + L Y + G G ++ Sbjct: 181 RRKEVSFSTKEPAGTIVVDTSNTHLYYVLGNNRAI-----RYGVRVGRDGFTWAGVQKIS 235 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC------- 110 + P+ + + P ++A G N Y G IHG Sbjct: 236 RKAEWPDWHPPTEMIERQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNQPSTIGK 293 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++F V+ Sbjct: 294 FVSSGCIGMLNEDVSDLFDRVKVGTRVVV 322 >gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5] Length = 167 Score = 113 bits (282), Expect = 3e-24 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 26/143 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + K +L+L + +K+Y I GPK EGD ++PEG Y + + Sbjct: 31 KVLVLKSAHQLQLING-----GKPLKTYRISLGKKPKGPKLMEGDKRTPEGLYWLDWRKT 85 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGCY 116 RY LA++I +PN D A G +MIHG + GC Sbjct: 86 --SDRYNLAMHISYPNITDAARSRREGVDPGGMIMIHGTPDTEEFPEQYFHTLDWTDGCI 143 Query: 117 AMTDAQIDEIFAFVRDAFVGGQP 139 AM + + E++ V+D + Sbjct: 144 AMRNVDMREVWGLVKDGTMIEIR 166 >gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 113 bits (282), Expect = 3e-24 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 28/147 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ Sbjct: 59 KVERIVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDY 113 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------V 111 NP S+Y A+++ +PN D G +MIHG Sbjct: 114 K--NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNW 171 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ +I+EI++ V++ + Sbjct: 172 TQGCVAVTNPEIEEIYSLVKEKTLIEI 198 >gi|22960373|ref|ZP_00008014.1| COG3034: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 166 Score = 113 bits (282), Expect = 4e-24 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 22/144 (15%) Query: 10 LPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 G PV +++ K +RK+ L ++++ Y + G K+ EGD ++PEG Y Sbjct: 28 YDGPPVTSVQVHKADRKMYLLNGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGVY 82 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG---------ACVSVG 114 + + NP S Y+L++ I +PN D+ G + IHG + G Sbjct: 83 FID--RQNPRSTYHLSLGISYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAG 140 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C A+TD +++E+++ VR Sbjct: 141 CIAITDDEVEEVYSMVRLGTPIYI 164 >ErfK_YbiS_YhnG_Q88MW7_45-182_PF03734.4 Length = 138 Score = 112 bits (281), Expect = 4e-24 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + K ER+L+L + +K+Y I G K REGD ++PEG Y + + Sbjct: 3 DKVLVIKSERRLQLISR-----GEPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRK 57 Query: 75 LNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VSVGC 115 R+ LA++I +PN D A G +MIHG + GC Sbjct: 58 Q--SDRFNLAMHINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGC 115 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 AM + + E++ VRD + Sbjct: 116 IAMRNRDMQEVWDLVRDGTLIEI 138 >gi|22958594|ref|ZP_00006262.1| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 342 Score = 112 bits (281), Expect = 5e-24 Identities = 26/152 (17%), Positives = 37/152 (24%), Gaps = 22/152 (14%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + +P I I ER L K Y I G G Sbjct: 71 QTVAYTSNEAPGTIVINPRERVLYFVTGKDTAI-----RYGIAVGKEGFQWSGTAVVANR 125 Query: 61 FQSPEGFYSVQPNQLNPDSR-YYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC---- 110 P + P+ + + G N Y IHG Sbjct: 126 RHWPTWTPPPEMIDRKPELKKWEKGQPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNS 185 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC M + + ++F V D Sbjct: 186 IGHNASSGCIRMINQDVVDLFERVPDGAKVVV 217 >ErfK_YbiS_YhnG_Q92K56_83-221_PF03734.4 Length = 139 Score = 112 bits (281), Expect = 5e-24 Identities = 25/144 (17%), Positives = 40/144 (27%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 P I I + L L + Y I G G R + P Sbjct: 1 EVPGTIIIDGNQHFLYLVQPGGQAI-----RYGIGVGREGFGWAGIVRVGRTAEWPTWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA--------CVSVG 114 + +P++ ++ + G N Y + IHG VS G Sbjct: 56 PPEMVARDPNAAKWAGGMPGGPDNPLGARALYLYEGDNDTIYRIHGTVEPWTIGLDVSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C M + I ++ + V Sbjct: 116 CIRMNNDDIIDLHSRVGVGAKVIV 139 >ErfK_YbiS_YhnG_Q6N1G4_67-202_PF03734.4 Length = 136 Score = 112 bits (281), Expect = 5e-24 Identities = 20/143 (13%), Positives = 40/143 (27%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + + L Y + L G R + P+ Sbjct: 1 EAPGTIVVDSDNHFLYYVLDNGKAL-----RYGVTVGEEALAFSGIARVGNMAEWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGC 115 + ++ ++ G N Y + IHG +S GC Sbjct: 56 TADIHKRIEGLP--SSVPGGIDNPLGARALYLYQGNKDTLFRIHGTNQPEYIGASISSGC 113 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 MT+ + +++ V+ + Sbjct: 114 IRMTNEDVIDLYNRVKMGTIVVV 136 >gi|71837343|ref|ZP_00677108.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 334 Score = 112 bits (281), Expect = 5e-24 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 26/146 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I I K +R+L L+ + +KSY I GPK REGD ++PEG Y + Sbjct: 195 AVTRILIEKGDRRLTLFSRN-----EALKSYRIALGGAPSGPKEREGDNKTPEGAYVIDS 249 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVSV 113 N +S+Y+L+++I +PN D+ G +MIHG A + Sbjct: 250 K--NGNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTR 307 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A++D +I+EI+ V+ Sbjct: 308 GCVAVSDEEIEEIYKLVQIGTAVEIR 333 >gi|71837344|ref|ZP_00677109.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 441 Score = 112 bits (281), Expect = 5e-24 Identities = 28/179 (15%), Positives = 46/179 (25%), Gaps = 28/179 (15%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREG 59 L LP +P I I +L +K Q++ +YP+ + GP R Sbjct: 113 PLSFILPDAPRKGIVINLATMRLFHYKGSGTA--QVVSTYPVGVGAEDRPTPPGPTRVVR 170 Query: 60 DFQSPEGFYS--VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC------ 110 P + +I G N Y G +IHG Sbjct: 171 KAAKPTWHVPASIAERHRMKGDILPASIPPGPDNPLGEYALYLGKAGYLIHGTNKPASVG 230 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFW 167 + GC + I +F + + R + + Sbjct: 231 LQATNGCMRLYPENIKTLFGETPVNTPVLIVNQPYLV----------GRRDGALYVEAH 279 >gi|48732631|ref|ZP_00266374.1| COG3034: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 171 Score = 112 bits (280), Expect = 6e-24 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWS-GGLGPKRREGDFQSPEGFYSVQPNQ 74 + + K +L+L + + +KSY I GPK EGD ++PEGFY + + Sbjct: 34 KVLVLKSAHQLQLI-----ADGKPLKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRK 88 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------------VSVGC 115 + ++ L+++I +PN D A G +MIHG + GC Sbjct: 89 TSE--KFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGC 146 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQP 139 AM + + E++ V D + Sbjct: 147 IAMRNVDMREVWNLVPDGTMIEIR 170 >ErfK_YbiS_YhnG_Q98ME9_286-425_PF03734.4 Length = 140 Score = 112 bits (280), Expect = 7e-24 Identities = 27/145 (18%), Positives = 44/145 (30%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I R+L L ++ + Y I GL G + P Sbjct: 1 YEPGTIVIDTSARRLYLVESFSTA-----RRYAIAVGREGLQFKGTVAVGDKQEWPRWIP 55 Query: 69 SVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA--------CVSV 113 ++ + P +Y + G N Y L IHG S Sbjct: 56 TLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASN 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC+ M + + ++++ VR Sbjct: 116 GCFRMINEHVMDLYSRVRVGTKVVI 140 >gi|69935633|ref|ZP_00630569.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 188 Score = 112 bits (280), Expect = 7e-24 Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 28/159 (17%) Query: 4 KELKQQLPGSP-VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG-LGPKRREGDF 61 + LP I + K ++ + L + +++K+Y I S G K+REGD Sbjct: 34 QPPAYALPEQQADRIVVSKGDKTMYLLRGD-----RILKTYRIAMGSNWNQGHKQREGDE 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC------ 110 ++PEG Y + NP S +L++++ +PNA D G +MIHG Sbjct: 89 RTPEGTYRIDW--RNPRSIAHLSLHVSYPNAEDSERARQAGYSPGGNIMIHGLPNGWGAM 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 + GC A+T+ ++ EI++ + + Sbjct: 147 GRLHRLLDWTDGCIAVTNDEMREIWSLTPNGTSITIKAE 185 >gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens] Length = 244 Score = 112 bits (280), Expect = 7e-24 Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 38/165 (23%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + LP P + I E +L + ++ +YP+ G ++ Sbjct: 86 PSRFILPNVPRKGVVINLAEYRLYYFPPDDN----VVMTYPVGIGKKGW---------ET 132 Query: 64 PEGFYSVQPNQLNPDSRY---------------YLAINIGFPNAYDRAHGY-TGKYLMIH 107 P G + ++NP R G N + ++IH Sbjct: 133 PLGLSRIISKEINPTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQHVLRLGWPAILIH 192 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 G+ VS GC M I+ +++ V + + Sbjct: 193 GSNRVDGIGAKVSAGCIRMLPDDIEHLYSLVSVGTPVRIINAPLQ 237 >gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 202 Score = 111 bits (279), Expect = 7e-24 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 26/157 (16%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + ++ + I I K RK+ L + +++K Y + G K+ EGD + Sbjct: 53 DSKFRRYYGPAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGK 107 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC------- 110 +PEG Y + + NP+S ++L++ I +PN+ D A+ G + IHG Sbjct: 108 TPEGTYLID--RRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRK 165 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+ + +I+EI+A VRD V + Sbjct: 166 KAKKQPDWTAGCIAVKNDEIEEIYAMVRDGTVITLRA 202 >gi|69950329|ref|ZP_00638228.1| ErfK/YbiS/YcfS/YnhG [Shewanella frigidimarina NCIMB 400] Length = 167 Score = 111 bits (279), Expect = 8e-24 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 26/149 (17%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 Q + + K E +L + + + +++KSY I G K +EGD ++P+G Y Sbjct: 24 QTTAKVDLVVVNKSESRLSVMR-----DGRVVKSYLIAMGDVPSGHKLKEGDQRTPQGRY 78 Query: 69 SVQPNQLNPDSRYYLAINIGFPN-----AYDRAHGYTGKYLMIHG--------------A 109 + + + S +Y +I+I +PN D G +MIHG Sbjct: 79 VLDYKKSD--SAFYKSIHISYPNEEDKLRADALGIRAGGMIMIHGENPRSTLPPEEAQKY 136 Query: 110 CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ ++DE++ + Sbjct: 137 NWTNGCIAVTNKEMDELWQMIDAGTPIEI 165 >gi|23346823|gb|AAN29007.1| lipoprotein, putative [Brucella suis 1330] Length = 241 Score = 111 bits (279), Expect = 8e-24 Identities = 23/154 (14%), Positives = 40/154 (25%), Gaps = 22/154 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + +P I + ++ L Y + G G E Sbjct: 92 RRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEAL-----RYGVGIGKAGFEWQGRANVE 146 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAI-NIGFPNAYDRAHGYTG-----KYLMIHGAC-- 110 Q P + Q P+ Y G N Y IHG+ Sbjct: 147 YKKQWPRWTPPPEMIQRKPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEW 206 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +S GC + + I +++ V+ Sbjct: 207 WSIGQSMSSGCIRLMNQDIIDLYNRVQGKAPIIV 240 >gi|15073710|emb|CAC45352.1| PUTATIVE SIGNAL PEPTIDE PROTEIN [Sinorhizobium meliloti] Length = 231 Score = 111 bits (279), Expect = 8e-24 Identities = 19/154 (12%), Positives = 37/154 (24%), Gaps = 23/154 (14%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDF 61 +++ + +P I + + L Y I G G + Sbjct: 59 KVRFRTDEAPGTIIVDTNSKYLYYIDGSNRA-----TRYGIGVGRDGFGWSGVVKVGRKA 113 Query: 62 QSPEGFYSVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC---- 110 + P + + + G N Y K IHG Sbjct: 114 EWPSWTPPAEMRVRERAKGRILPITQPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWT 173 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +S GC M + ++ ++ Sbjct: 174 IGQNMSSGCIRMMNEDVEHLYERAGIGTKVVVIG 207 >ErfK_YbiS_YhnG_Q57D03_90-229_PF03734.4 Length = 140 Score = 111 bits (279), Expect = 9e-24 Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I I ++R L L + + Y I GL G + P Sbjct: 1 YKPGTIVIDPKKRFLYLVETSTTA-----RRYGIAVGKQGLEFQGKATISAKREWPRWIP 55 Query: 69 SVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGA--CV------SV 113 + + + +P R+ ++ G N Y Y+ IHG S Sbjct: 56 TKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTIGSSASN 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC+ M + + +++ V Sbjct: 116 GCFRMINEDVMDLYDRVTLGTEVVV 140 >gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct] Length = 324 Score = 111 bits (278), Expect = 1e-23 Identities = 24/175 (13%), Positives = 45/175 (25%), Gaps = 29/175 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEG 66 PG + I E +L + ++ +YP+ G G R + P Sbjct: 92 PGPREGVVINLAEYRLYYYPKGQN----VVHTYPLGIGREGWGSPIANTRITAKTKDPAW 147 Query: 67 FYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGC 115 + + + G N G +IHG+ S GC Sbjct: 148 YPPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGYLIHGSNKKFGIGTRTSHGC 207 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQL 170 + M +A + +F+ + + + L Sbjct: 208 FRMYNADVTHLFSMISVGTSVRIINEPYK----------FGVSNGKVYLEAHTPL 252 >gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 321 Score = 111 bits (278), Expect = 1e-23 Identities = 22/149 (14%), Positives = 39/149 (26%), Gaps = 19/149 (12%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEG 66 PG I I E ++ + ++ +YP+ G G + +P Sbjct: 94 PGPREGIVINLAEYRMYYYPKGQN----VVHTYPLGVGREGWGSPIGVTKVTAKTPNPTW 149 Query: 67 FYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGC 115 + + G N G +IHG+ S GC Sbjct: 150 TPPASIKAEHAADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGIGMRTSHGC 209 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVS 144 + M + + E+ S Sbjct: 210 FRMYNNNVLELADMAPVGTTVRIISEPYK 238 >gi|71836515|ref|ZP_00676284.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 471 Score = 111 bits (278), Expect = 1e-23 Identities = 32/177 (18%), Positives = 51/177 (28%), Gaps = 41/177 (23%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I I +R L +K E +L S P+ G D+ +P G + V Q Sbjct: 264 HGIVINIPDRTLYYFK-----EGKLTTSLPVALGQPQKGATY---DWMTPTGKFRVVAKQ 315 Query: 75 LNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC-------- 110 +P +I G N + T ++IH Sbjct: 316 TDPTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHSTTRPGSIYRF 375 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFW 167 S GC + Q+ + F VR G V + +T+ + Sbjct: 376 ASHGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVKLA---VTEE------GRVFLEVH 423 >gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] Length = 171 Score = 111 bits (277), Expect = 1e-23 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 26/143 (18%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 ++I K ER++ L + + IK Y + G K +EGD ++PEG Y + + Sbjct: 34 DLVKIDKSERRMYLLEN-----GKTIKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYKK 88 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVSVGC 115 + S +Y A++I +PN D + G +MIHG + GC Sbjct: 89 ED--SSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGC 146 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 A+T++++D+ + V+ Sbjct: 147 IALTNSEMDQFMSLVKVGTKIHI 169 >gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 175 Score = 111 bits (277), Expect = 1e-23 Identities = 28/149 (18%), Positives = 44/149 (29%), Gaps = 18/149 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + SP I + ER+L L YP+ G G + + Sbjct: 31 RPDLVVFRGDYSPGTIVVRTGERRLYLVVEPGHAV-----RYPVGVGKAGKQWAGVTKID 85 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGAC------- 110 G F++P + + P + N A G IHG Sbjct: 86 GKFRNPAWAPPAEVKRDVPTIP-DVIPGGSPANPMGVAAMTLAGGEYAIHGTNRPQSIGG 144 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + I +++ V Sbjct: 145 FVSYGCIRMLNDDITDLYERVPVGTQVVV 173 >ErfK_YbiS_YhnG_Q92KJ2_100-241_PF03734.4 Length = 142 Score = 111 bits (277), Expect = 1e-23 Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + +R L L + Y + G G + + P+ Sbjct: 1 EAPGTIVVDTADRYLYLVQPGGRAM-----RYGVGLGREGFAWSGRGLIQWKQKWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 + P Y A + G N Y +HG V Sbjct: 56 PNEMIARQPVLAKYSADNGGMPPGLDNPLGSRALYIFQNGQDTLYRVHGTPEWQSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC M + + +++ VR+ Sbjct: 116 SSGCVRMVNQDVIDLYDRVRNKAPILV 142 >gi|69300977|ref|ZP_00622438.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 186 Score = 111 bits (277), Expect = 1e-23 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 27/158 (17%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + + + + I K R L L + + + I+SY I + G K+ EGD Sbjct: 35 TPPPMAEAHQQADEILVI-KSTRALHLLR-----DGETIRSYDISLGAAPEGHKQSEGDE 88 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPN-----AYDRAHGYTGKYLMIHGAC------ 110 ++PEG Y + NP+S +L+++I +PN A A G +MIHG Sbjct: 89 RTPEGRYEIDW--RNPNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGAL 146 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + GC A+T+A++ EI++ V D Sbjct: 147 GALHLMLDWTDGCIAVTNAEMREIWSLVPDGTPITIAE 184 >gi|23006269|ref|ZP_00048665.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 248 Score = 111 bits (277), Expect = 2e-23 Identities = 24/160 (15%), Positives = 41/160 (25%), Gaps = 28/160 (17%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + +E+ + P I + + L + Y + G G Sbjct: 92 LRQEVDFRTTEPPGTIVVDPKAHFLYFVLPNGRA-----RRYGVGVGKQGFSWSGTATIN 146 Query: 59 GDFQSPEGFYSVQPNQLNPDS-------RYYLAINIGFPNAYDRAHGYTGKY-----LMI 106 P+ + + PD + L + G N Y + I Sbjct: 147 SKQAWPDWYPPKEMIARRPDLASQVDKLQSGLGVPGGTRNPLGARAMYLWQNNKDTLFRI 206 Query: 107 HGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 HG VS GC M + ++F V Sbjct: 207 HGTLEPQSIGKSVSSGCIRMINQDAIDLFNRVEVGARVVV 246 >ErfK_YbiS_YhnG_Q8UH41_160-301_PF03734.4 Length = 142 Score = 110 bits (276), Expect = 2e-23 Identities = 20/147 (13%), Positives = 39/147 (26%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + + L L ++ Y + G G + + + P Sbjct: 1 EAPGTIVVDTRQHFLYLVQSGGKAI-----RYGVGLGRDGYAWSGRGKIQWKAKWPRWTP 55 Query: 69 SVQPNQLNPD----SRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACV-------- 111 + + P+ S + G N Y +HG Sbjct: 56 PDEMVKRQPELTSISAANGGMTPGLNNPLGARALYIFKDGKDTLYRVHGTPDWQSVGKAT 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC M + + +++ V Sbjct: 116 SSGCVRMLNQDVIDLYERVPQGAQIVV 142 >ErfK_YbiS_YhnG_Q9KIP0_82-225_PF03734.4 Length = 144 Score = 110 bits (276), Expect = 2e-23 Identities = 24/141 (17%), Positives = 37/141 (26%), Gaps = 24/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + ER L A Y I G G + P Sbjct: 1 ERPGTIIVNTRERFLYYILANGKAM-----RYGIGVGKQGFAWAGTAYVAWKQEWPNWHP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC--------VS 112 + PD Y+ + G N Y +HG S Sbjct: 56 PKEMAVRRPDLAKYVEDGMGPGLSNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGTAAS 115 Query: 113 VGCYAMTDAQIDEIFAFVRDA 133 GC + + + ++++ VR Sbjct: 116 SGCIRLMNQDVIDLYSRVRPG 136 >gi|46192110|ref|ZP_00007275.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 284 Score = 110 bits (276), Expect = 2e-23 Identities = 26/155 (16%), Positives = 42/155 (27%), Gaps = 23/155 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRRE 58 V +E+ P I + R L L + Y I G G Sbjct: 92 VRREVDYFTDQPPGTIVVDPYARYLYLVQPGQRAL-----RYAIAVGREGRGFSGEAVIP 146 Query: 59 GDFQSPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAHGYTG-----KYLMIHGACV 111 + P + +P+ + ++ G N Y Y IHG Sbjct: 147 IKREWPRWIPTKSMIAEDPEQYGPWKDGMDGGLSNPLGARALYLHRDGKDTYYRIHGTND 206 Query: 112 --------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + I +++A V Sbjct: 207 VSSIGKATSAGCIRLWNQDILDLYARVSLGTQVVV 241 >gi|26989044|ref|NP_744469.1| hypothetical protein PP2320 [Pseudomonas putida KT2440] Length = 325 Score = 110 bits (276), Expect = 2e-23 Identities = 25/175 (14%), Positives = 48/175 (27%), Gaps = 29/175 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEG 66 PG I I E ++ + ++ ++P+ G G R +P Sbjct: 94 PGPREGIVINLAEYRMYYFPKGES----VVYTFPLGIGREGWGSPIANTRITAKTPNPTW 149 Query: 67 FYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGC 115 + + + L + G N G +IHG+ S GC Sbjct: 150 TPPASIRKEHAEDGDILPTVVPAGPDNPLGPFKFTLGVPGYLIHGSNKKFGIGMRTSHGC 209 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQL 170 + M + + E+ V + F ++ + L Sbjct: 210 FRMFNNNVLELSKMVPVGTPVRIINEPYK---FGISA-------GKVYLEAHTPL 254 >gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Bradyrhizobium japonicum USDA 110] Length = 401 Score = 110 bits (275), Expect = 2e-23 Identities = 23/149 (15%), Positives = 40/149 (26%), Gaps = 19/149 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ I + L Y + G G ++ Sbjct: 211 RRQEVSLATKEPAGTIIVDTPNTYLYYVLGNGRAV-----RYGVRVGRDGFTWTGVQKIT 265 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGAC------- 110 + P+ + + P ++A G N Y G IHG Sbjct: 266 RKAEWPDWHPPTEMIERQPYLPRFMAGGPG--NPLGARAMYLGSTVYRIHGTNQPSTIGK 323 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++F V+ Sbjct: 324 FVSSGCIGMLNEDVSDLFDRVKVGTRVVV 352 >gi|16119419|ref|NP_396125.1| hypothetical protein AGR_pAT_272 [Agrobacterium tumefaciens str. C58] Length = 248 Score = 110 bits (275), Expect = 2e-23 Identities = 21/161 (13%), Positives = 39/161 (24%), Gaps = 25/161 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + +P + + R L L + Y + G G Sbjct: 90 LRQRVADPTGEAPGTVVVDTPRRFLYLVENGGTAL-----RYGVGIGRDGFSWEGNGYIH 144 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGA 109 P + P+ Y ++ G N Y +HG Sbjct: 145 WRQHWPRWKPPSEMIARQPELEKYSVANGGMDPGLHNPLGARALYIFQNGEDTLYRLHGN 204 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 VS GC + + I +++ V Sbjct: 205 PEWQSIGKAVSSGCVRLMNQDIVDLYDRVPFHAPIVVHQTP 245 >gi|71674300|ref|ZP_00672047.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 219 Score = 110 bits (275), Expect = 2e-23 Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 29/146 (19%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 P + + I +R++ ++K QL SYPI G ++P G Sbjct: 86 YIKPNETISLVIKLSDRRVYVYKND-----QLKTSYPIAIGKEGW---------ETPTGT 131 Query: 68 YSVQPNQLNPDSRYYLA---INIGFPNAYDRAHGYTG----KYLMIHGAC--------VS 112 + V NP + I G N Y+ HG S Sbjct: 132 HKVIQKIPNPSWTHPFTGEIIPPGPENPLGERWIGFWTDGTNYIGFHGTPNEETVGQAAS 191 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC M + + ++F V + Sbjct: 192 HGCVRMFNQDVLDLFEKVTIGTIVVV 217 >ErfK_YbiS_YhnG_Q5LWI9_62-200_PF03734.4 Length = 139 Score = 110 bits (275), Expect = 3e-23 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 26/145 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I I K RK+ L + +++K Y + G K+ EGD ++PEG Y + Sbjct: 1 PAVTSIVINKGARKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLID 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHGAC--------------VS 112 + NP+S ++L++ I +PN+ D A+ G + IHG + Sbjct: 56 --RRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGG 137 GC A+ + +I+EI+A VRD V Sbjct: 114 AGCIAVKNDEIEEIYAMVRDGTVIT 138 >gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 110 bits (275), Expect = 3e-23 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 32/155 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ Sbjct: 77 RIVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK-- 129 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC----------------VSVG 114 NP S++ ++++ +PN D A+ + G +MIHG ++G Sbjct: 130 NPKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLG 189 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFR 149 C A+T+ +I+EI+A V++ + I P + Sbjct: 190 CIAVTNKEIEEIYALVKERTLVEV----CKISPTK 220 >gi|68548239|ref|ZP_00587752.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 165 Score = 109 bits (274), Expect = 3e-23 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 27/156 (17%) Query: 3 SKELKQQLPG-SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 S + PG + + K E +++++ +LIKSY I G K +EGD Sbjct: 15 SVQANAIKPGQKVDLVVVNKAEAQMQVFYR-----GELIKSYRIAMGDNPKGHKLKEGDQ 69 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG-------- 108 ++P+G Y + + + S YY +I+I +PN D G +MIHG Sbjct: 70 RTPQGRYLLDFKKAD--SAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLS 127 Query: 109 ------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ +DE++ + Sbjct: 128 AEEAQKYNWTNGCIAVTNRDMDELWQLIDPGTPIEI 163 >gi|68190217|gb|EAN04877.1| Twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1] Length = 238 Score = 109 bits (274), Expect = 3e-23 Identities = 20/159 (12%), Positives = 38/159 (23%), Gaps = 25/159 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + P + + L L + Y + G G + Sbjct: 79 YRQLVDDPTGERPGTVVVDTRSYFLYLVRPGGKAM-----RYGVGLGRQGFTWSGDGVIQ 133 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAI----NIGFPNAYDRAHGYT-----GKYLMIHGA 109 + P+ + P+ + A G N Y +HG Sbjct: 134 WKQRWPKWTPPAEMIARQPELEKWSADNGGQPPGLNNPLGARALYIFQNGEDTLYRLHGT 193 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC + + I +++ V Sbjct: 194 PEYWTIGKAVSSGCVRLMNQDIIDLYDRVATPTPIIVRG 232 >gi|37675934|ref|NP_936330.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 161 Score = 109 bits (274), Expect = 4e-23 Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ Sbjct: 21 EQVDWVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLD 75 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 +S +Y +++I +PN D G + +HG + Sbjct: 76 YVTE--ESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWT 133 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE V+ Sbjct: 134 NGCIALTNQEMDEFIRLVKMGTPIHI 159 >ErfK_YbiS_YhnG_Q89WV4_37-169_PF03734.4 Length = 133 Score = 109 bits (273), Expect = 4e-23 Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 18/139 (12%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 SP I + ER+L L YP+ G G R +G +++P Sbjct: 1 YSPGTIVVKTNERRLYLILDDGHAV-----RYPVGVGKSGKQWAGTTRIDGKYRNPAWSP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGACV--------SVGCYAMT 119 + + P + N A G IHG V S GC M Sbjct: 56 PAEVKRDKPQLP-DVIPGGSPRNPMGVAAMTLAGGEYAIHGTNVPGSVGGFVSYGCIRML 114 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + I ++++ V Sbjct: 115 NDDITDLYSRVSVGTTVVV 133 >gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesorhizobium loti MAFF303099] Length = 196 Score = 109 bits (273), Expect = 4e-23 Identities = 24/149 (16%), Positives = 40/149 (26%), Gaps = 23/149 (15%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQ 62 + P I I K E+ L L + Y I G G + + Sbjct: 54 VSFATTEQPGTIIIRKSEKALYLVTRQGQAL-----RYQISVGRDGFGWTGVVKVGAKTE 108 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACV------ 111 P+ + P+ + G N Y IHG Sbjct: 109 WPQWRPPREMRARQPELPE--LVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGVGF 166 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC+ +T+ + ++F V Sbjct: 167 DGTSGCFRLTNTDVIDLFKRVPVGTKVVV 195 >gi|69933021|ref|ZP_00628223.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 248 Score = 109 bits (273), Expect = 5e-23 Identities = 22/158 (13%), Positives = 37/158 (23%), Gaps = 23/158 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + P + I + R L Y + G G Sbjct: 62 RRQRVPYNGPEAAGTIVVDPYARFLYHVLGNGEAM-----RYGVAVGQAGKNFQGTASVG 116 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAIN--IGFPNAYDRAHGYTGKY-----LMIHGACV 111 P + + P+ L G N Y K IHG Sbjct: 117 RKHAWPSWTPTANMVRTQPELYGPLKGGLRGGVDNPLGSRALYLYKGGRDTMYRIHGTMD 176 Query: 112 --------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC + + I ++F + + + Sbjct: 177 PSSIGKATSAGCIRLFNQDIMDLFHDIPNGTTVKVRTQ 214 >gi|15141233|emb|CAC49746.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 243 Score = 109 bits (273), Expect = 5e-23 Identities = 19/160 (11%), Positives = 35/160 (21%), Gaps = 25/160 (15%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGD 60 + + + + R L L + Y + G G Sbjct: 83 QRVPDPTGEPAGTVVVDTPGRFLYLIEPGGTAM-----RYGVGIGREGFAWQGEGIIHWR 137 Query: 61 FQSPEGFYSVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGAC- 110 P P+ Y + G N Y +HG Sbjct: 138 QPWPRWKPPADMIARRPELEKYSVANGGMAPGIDNPLGARALYIFQNGQDTLYRLHGTPE 197 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 VS GC + + + +++ V + Sbjct: 198 WKSIGKAVSSGCVRLVNQDVIDLYKRVPYHAPIVVYQKPL 237 >DUF949_Q60B45_95-280_PF06104.2 Length = 186 Score = 109 bits (272), Expect = 5e-23 Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW +Y+LI+ Y I SG GPK R+GD Sbjct: 1 PYFERAGVAFPPREVVLVGLKQEKKLELWARDGS-DYRLIRHYDIQAASGSAGPKLRQGD 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRA------HGYTGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D G + IHG VS G Sbjct: 60 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 118 CLAMGDEAIEELFVLT---AQVGKENVKVVIAP 147 >gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5] Length = 330 Score = 109 bits (272), Expect = 5e-23 Identities = 23/175 (13%), Positives = 41/175 (23%), Gaps = 29/175 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEG 66 PG I I E +L + ++ ++P+ G G +P Sbjct: 100 PGPREGIVINLAEYRLYYYPKGRN----VVYTFPLGIGREGWGSPIAHTSITAKTPNPTW 155 Query: 67 FYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGC 115 + + G N G +IHG+ S GC Sbjct: 156 TPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGYLIHGSNKKFGIGMRTSHGC 215 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQL 170 + M + + E+ V + + L Sbjct: 216 FRMLNNNVLEMAGMVPVGTSVRIINDPYK----------FGISGGKVYLEAHTPL 260 >gi|71363822|ref|ZP_00654424.1| similar to Uncharacterized protein conserved in bacteria [Psychrobacter cryohalolentis K5] Length = 187 Score = 108 bits (271), Expect = 6e-23 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 26/145 (17%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + K R L+L ++IKSY I +G K+++GD ++P G Y + Sbjct: 50 DKVFVDKSARTLQLLSDN-----KVIKSYHIALGGNPVGHKQQQGDKRTPTGSYILDYK- 103 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHG--------------ACVSVGC 115 N S++Y +I++ +PNA D+A + G +MIHG + GC Sbjct: 104 -NEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDGC 162 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPS 140 A+TD ++DEI A V Sbjct: 163 IAVTDNEMDEIMAAVEIGTPIEIVE 187 >gi|17933973|ref|NP_530763.1| hypothetical protein Atu0048 [Agrobacterium tumefaciens str. C58] Length = 261 Score = 108 bits (271), Expect = 7e-23 Identities = 24/159 (15%), Positives = 42/159 (26%), Gaps = 26/159 (16%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + ++ Q P I + +R L + Y I G G Sbjct: 107 RRQIVEFQTSERPGTIIVNTRDRYLYYIMSGNRAV-----RYGIGVGKAGFAWAGEAYVA 161 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC 110 + P + P+ Y+ + G N Y IHG+ Sbjct: 162 WKQEWPMWHPPKEMADRKPEVAKYVEAGMGPGLSNPLGARAMYLFNEKGQDTLFRIHGSP 221 Query: 111 --------VSVGCYAMTDAQIDEIFAFVRDA--FVGGQP 139 S GC M + + ++++ VR Sbjct: 222 EWASIGTAASSGCIRMINQDVIDLYSRVRPGRSTKVVVI 260 >gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath] Length = 292 Score = 108 bits (271), Expect = 7e-23 Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + P V + K+E+KLELW +Y+LI+ Y I SG GPK R+GD Sbjct: 95 PYFERAGVAFPPREVVLVGLKQEKKLELWARDGS-DYRLIRHYDIQAASGSAGPKLRQGD 153 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRA------HGYTGKYLMIHGACVSVG 114 Q PEG Y + LNP+S Y+L++ + +PN +D G + IHG VS G Sbjct: 154 KQVPEGVYRIV--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAG 211 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C AM D I+E+F G+ +V+V I P Sbjct: 212 CLAMGDEAIEELFVLT---AQVGKENVKVVIAP 241 >ErfK_YbiS_YhnG_Q8CVY2_94-231_PF03734.4 Length = 138 Score = 108 bits (271), Expect = 7e-23 Identities = 23/137 (16%), Positives = 37/137 (27%), Gaps = 19/137 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----REGDFQSPEGFYSVQ 71 I + E +L + ++ +PI G R E ++P + Sbjct: 6 IVVNVAEMRLYYYPPDSNT----VEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPN 61 Query: 72 PNQL--NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDA 121 + + G N Y GK IHG S GC + + Sbjct: 62 TRREYAKRGESLPAFVPAGPDNPMGLYAIYIGKLYAIHGTNANFGIGLRVSQGCIRLRND 121 Query: 122 QIDEIFAFVRDAFVGGQ 138 I +F V Sbjct: 122 DIKYLFDNVPVGTRVQI 138 >gi|53802376|ref|YP_112943.1| LysM domain protein [Methylococcus capsulatus str. Bath] Length = 434 Score = 108 bits (271), Expect = 8e-23 Identities = 28/182 (15%), Positives = 52/182 (28%), Gaps = 30/182 (16%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREG 59 L+ LP +P + I +L + A +I +YP+ G G Sbjct: 94 PLQFTLPDAPRKGMVINLATMRLYHFPA--KAAEGVISTYPVGIGKEGRSTPTGYMTVVR 151 Query: 60 DFQSPEGFYSVQPNQLNPDSRY---YLAINIGFPNAYDRAHGY-TGKYLMIHGAC----- 110 + P Y + + + + A++ G N Y + +IHG Sbjct: 152 KTEFPTW-YPTENIRRDHALKGDPLPPAVSPGPDNPLGDYAMYLSRPQYLIHGTNKPYSI 210 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFW 167 S GC + I +F V+ + + R + Sbjct: 211 GFRASNGCIRLYPEDIAAVFPEVKPGAAVRIVNQPYLV----------GRKGGQVYLEAH 260 Query: 168 KQ 169 + Sbjct: 261 EP 262 >gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 108 bits (271), Expect = 8e-23 Identities = 20/156 (12%), Positives = 36/156 (23%), Gaps = 26/156 (16%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKW---SGGLGPKRR 57 + + SP I + + L Y I G + Sbjct: 56 FRRAIVEYHRKESPGSIVVDSDNHYLYYVLDGGKAI-----RYGITVGEEAMAWSGIAKV 110 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P + Y + G N Y IHG Sbjct: 111 GSMTEWPAWHPTPGEISRLGVPTY---VAPGPDNPMGSRAMYLYSGGKDTLFRIHGTNQP 167 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +S GC +T+ +++ V+ + Sbjct: 168 EYIGASISSGCIRLTNEDAIDLYGRVKVGTIVVVLE 203 >ErfK_YbiS_YhnG_Q7MFP6_21-159_PF03734.4 Length = 139 Score = 108 bits (270), Expect = 8e-23 Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ K +R+L L + ++I+ Y I G K +EGD ++PEG Y++ Sbjct: 1 EQVDWVKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGA--------------CVS 112 +S +Y +++I +PN D G + +HG + Sbjct: 56 YVTE--ESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE V+ Sbjct: 114 NGCIALTNQEMDEFIRLVKMGTPIHI 139 >ErfK_YbiS_YhnG_Q6MLF0_58-198_PF03734.4 Length = 141 Score = 108 bits (270), Expect = 8e-23 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 28/147 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I + K+ ++L L + L+K YP+ +G K+ EGD ++PEG YS+ Sbjct: 2 KVERIVVSKDRKELYLISGE-----TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDY 56 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC----------------V 111 NP S+Y A+++ +PN D G +MIHG Sbjct: 57 K--NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNW 114 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ +I+EI++ V++ + Sbjct: 115 TQGCVAVTNPEIEEIYSLVKEKTLIEI 141 >gi|17937039|ref|NP_533828.1| hypothetical protein Atu3331 [Agrobacterium tumefaciens str. C58] Length = 261 Score = 108 bits (270), Expect = 1e-22 Identities = 23/159 (14%), Positives = 41/159 (25%), Gaps = 25/159 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + P I + L L Y + G G + Sbjct: 72 LRQMVPNPTGERPGVIVVDTANHFLYLTYEDGQAM-----RYGVGLGRAGFEWAGRGVIQ 126 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGA 109 Q P + P+ Y + G N Y +HG+ Sbjct: 127 YKRQWPRWTPPDEMIARQPELEPYSGRNGGMEPGLKNPLGARALYIFKDGKDTIYRLHGS 186 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC + + I ++++ V D + Sbjct: 187 PEWWTIGKSVSSGCVRLLNQDIVDLYSRVPDGTPIVVTA 225 >gi|68180638|ref|ZP_00553621.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] Length = 160 Score = 108 bits (270), Expect = 1e-22 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 27/149 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + ++K ER + L +++SY I G K EGD ++PEG Y + Sbjct: 26 PQVTRVLVYKGERMMYLMHNND-----VLESYEIELGFAPEGHKLEEGDGRTPEGEYMID 80 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC--------VSVGCYAM 118 + NP+S++YL+I I +PN D A G + IHG +VGC A+ Sbjct: 81 --RRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAV 138 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 T+A++ +I+A V + +SIYP Sbjct: 139 TNAEMRQIYAMVENGT-------PISIYP 160 >gi|13474192|ref|NP_105760.1| hypothetical protein mll5027 [Mesorhizobium loti MAFF303099] Length = 255 Score = 108 bits (269), Expect = 1e-22 Identities = 24/157 (15%), Positives = 44/157 (28%), Gaps = 24/157 (15%) Query: 1 PVSKELKQ--QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPK 55 P + +P I + +ER L L + Y + G G Sbjct: 103 PEFRRQIVVDTTGEAPGTIVVHLKERMLYLVQPGGDAI-----RYGVGIGKDGFRWSGRA 157 Query: 56 RREGDFQSPEGFYSVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTG-----KYLMIHGA 109 + + P + Q P+ ++ G N Y IHG+ Sbjct: 158 NIQYGREWPTWTPPPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGS 217 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +S GC + + I ++++ V Sbjct: 218 PEWWSIGQAMSSGCVRLINQDIIDLYSRVSKKNPVVV 254 >gi|68542096|ref|ZP_00581832.1| ErfK/YbiS/YcfS/YnhG [Shewanella baltica OS155] Length = 188 Score = 108 bits (269), Expect = 1e-22 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K +EGD ++P+G Y++ Sbjct: 48 GKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLD 102 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------------ACVS 112 + PDS YY +I+I +PN D+ G +MIHG + Sbjct: 103 YKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWT 160 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+A++DE++ V + Sbjct: 161 DGCIAITNAEMDEVWKVVDEGTPIEI 186 >gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633] Length = 165 Score = 108 bits (269), Expect = 1e-22 Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + + +++ K +R++ L + + ++K Y I + G K+ EGD ++PE Sbjct: 19 VTFSTHAAVDLVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPE 73 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGA----------- 109 G Y++ + S +Y +++I +P+A D R G + IHG Sbjct: 74 GSYTLDYVIED--SAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFI 131 Query: 110 ---CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+ ++DE V Sbjct: 132 QSFDWTNGCIALTNEEMDEFIQLVTMGTPITI 163 >gi|69937365|ref|ZP_00632031.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 171 Score = 108 bits (269), Expect = 1e-22 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 23/150 (15%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + + G P+ I + K +RK+ L K +++KSY + + GPK+ EGD ++ Sbjct: 27 QPSKTYQGPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDGRT 81 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG---------- 108 PEG Y + + NP SRY+L++ I +P+A D A G + IHG Sbjct: 82 PEGMYFID--RFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRALNR 139 Query: 109 ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 A + GC A+TD +I+EIF +R Sbjct: 140 ADWTAGCIAVTDEEIEEIFTMLRPGVPIFI 169 >gi|68003734|ref|ZP_00536280.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 333 Score = 108 bits (269), Expect = 1e-22 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 26/150 (17%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 S I I K+ R++ L ++K+Y I +GPK R+GD ++PEG Y Sbjct: 190 IRKPSLDKILIEKQARRMMLISK-----GAVLKTYRIALGGDPIGPKERQGDNKTPEGAY 244 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIH--------------GA 109 ++ N DSRY+ A++I +PN DR G +MIH G Sbjct: 245 TID--ARNRDSRYHRALHISYPNERDRKRARELGVSPGGNIMIHGIKNGFSWVGDAHAGV 302 Query: 110 CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC A+TD +I+EI + + Sbjct: 303 DWTKGCIAVTDEEIEEIDTLAPNGTIVEIR 332 >gi|68004185|ref|ZP_00536684.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 481 Score = 108 bits (269), Expect = 1e-22 Identities = 26/179 (14%), Positives = 51/179 (28%), Gaps = 39/179 (21%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I I +R L ++ ++ + + + D+ +P G + + Sbjct: 271 DDGIVINIPDRTLYYFRN-----GEVDRVLSVAVGKPKPVNDPEKRDWHTPTGNFRIIGK 325 Query: 74 QLNPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGACV------ 111 +P R +I G N + T ++IH Sbjct: 326 VKDPTWRVPPSIRKEMKERGKEVKTIVPPGKKNPLGKYALKTSIPGILIHSTNAPESVYS 385 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWK 168 S GC + +++ F V + G V +MT A Q + + Sbjct: 386 FSSHGCIRVFPEFMEDFFNSVTEETTGEIIYEPV-----KMTVAEGQ-----VFLEVHR 434 >ErfK_YbiS_YhnG_Q92KL9_66-205_PF03734.4 Length = 140 Score = 107 bits (268), Expect = 1e-22 Identities = 19/145 (13%), Positives = 33/145 (22%), Gaps = 23/145 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 +P I + + L Y I G G + + P Sbjct: 1 EAPGTIIVDTNSKYLYYIDGSNRA-----TRYGIGVGRDGFGWSGVVKVGRKAEWPSWTP 55 Query: 69 SVQPN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSV 113 + + + G N Y K IHG +S Sbjct: 56 PAEMRVRERAKGRILPITQPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTIGQNMSS 115 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC M + ++ ++ Sbjct: 116 GCIRMMNEDVEHLYERAGIGTKVVV 140 >gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 435 Score = 107 bits (268), Expect = 1e-22 Identities = 29/191 (15%), Positives = 47/191 (24%), Gaps = 46/191 (24%) Query: 5 ELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L LP +P I I +L +K G + +YP+ + + Sbjct: 109 PLNFILPDAPRKGIVINLATMRLFQFKENGGAL--AVSTYPVGIG---------TKERPT 157 Query: 64 PEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAHGY-TGKYLMIH 107 P+G V P +I G N Y + +IH Sbjct: 158 PQGPTRVARKASRPTWYVPASIAEDHRKKGDILPARVPPGPENPLGDYALYLSRSGYLIH 217 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 G S GC + I+ +F + I + Sbjct: 218 GTNKPASIGLKASNGCMRLYPEHIEVLFRDTAVNTPVLIVNQPYLI----------GQRD 267 Query: 160 NSPNYDFWKQL 170 + L Sbjct: 268 GVLYMEAHTPL 278 >ErfK_YbiS_YhnG_Q8UAP2_82-223_PF03734.4 Length = 142 Score = 107 bits (268), Expect = 1e-22 Identities = 23/147 (15%), Positives = 37/147 (25%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + L L Y + G G + Q P Sbjct: 1 ERPGVIVVDTANHFLYLTYEDGQAM-----RYGVGLGRAGFEWAGRGVIQYKRQWPRWTP 55 Query: 69 SVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 + P+ Y + G N Y +HG+ V Sbjct: 56 PDEMIARQPELEPYSGRNGGMEPGLKNPLGARALYIFKDGKDTIYRLHGSPEWWTIGKSV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + I ++++ V D Sbjct: 116 SSGCVRLLNQDIVDLYSRVPDGTPIVV 142 >ErfK_YbiS_YhnG_Q57FW6_102-240_PF03734.4 Length = 139 Score = 107 bits (268), Expect = 2e-22 Identities = 23/144 (15%), Positives = 38/144 (26%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + ++ L Y + G G E Q P Sbjct: 1 QAPGTIVVSLKDHFLYYVLPGGEAL-----RYGVGIGKAGFEWQGRANVEYKKQWPRWTP 55 Query: 69 SVQPNQLNPDSRYYLAI-NIGFPNAYDRAHGYTG-----KYLMIHGAC--------VSVG 114 + Q P+ Y G N Y IHG+ +S G Sbjct: 56 PPEMIQRKPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C + + I +++ V+ Sbjct: 116 CIRLMNQDIIDLYNRVQGKAPIIV 139 >gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 107 bits (267), Expect = 2e-22 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 17/156 (10%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + LP P+ I I ++++ L+ LI + G +P Sbjct: 68 APEPLPKGPLQIIISIADQRVSLFDN-----GALIARSSVSTGMEG---------HPTPL 113 Query: 66 GFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDE 125 G +SV Q S Y A + + + + + G S GC + Sbjct: 114 GVFSVISKQRWHRSNIYSAAPMPYMQRITWSGIALHAGV-VPGHPASHGCIRLKSDFAVR 172 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNS 161 ++ + V P +T+ ++ + + S Sbjct: 173 LWHLTKRGTRVIIAHGDVQ--PVEITNPHLFQAKAS 206 >gi|29654462|ref|NP_820154.1| lipoprotein, putative [Coxiella burnetii RSA 493] Length = 233 Score = 107 bits (267), Expect = 2e-22 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 12/153 (7%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K P + + +FK +++LW G ++ I+S+PI SGG GPK +GD Sbjct: 54 PYFKRAGVSYPPKDISLLVFKNSHRVQLWAKD-RGPWRYIRSFPILASSGGPGPKLHDGD 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVG 114 Q PEG Y + NP SR+ L++ + +PN+ DR + G + IHG+ S+G Sbjct: 113 HQVPEGVYKIV--GFNPASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIG 170 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYP 147 C + + I+++F ++ G+ ++V I P Sbjct: 171 CIPIGNKAIEQLFVLA---YLVGERHIKVIIAP 200 >gi|48730422|ref|ZP_00264169.1| COG1376: Uncharacterized protein conserved in bacteria [Pseudomonas fluorescens PfO-1] Length = 323 Score = 106 bits (266), Expect = 2e-22 Identities = 23/175 (13%), Positives = 43/175 (24%), Gaps = 29/175 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEG 66 PG I I E +L + ++ ++P+ G G +P Sbjct: 94 PGPREGIVINLAEYRLYYYPKGRN----VVYTFPLGIGREGWGSPIAHTTITAKTPNPTW 149 Query: 67 FYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGC 115 + + G N G +IHG+ S GC Sbjct: 150 TPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGYLIHGSNKKFGIGMRTSHGC 209 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQL 170 + M + + E+ + V + R + + Sbjct: 210 FRMFNNNVLEMASMVPVGTSVRILNDAYK----------FGRSGGKIYLEAHTPI 254 >ErfK_YbiS_YhnG_Q8UH40_114-255_PF03734.4 Length = 142 Score = 106 bits (266), Expect = 2e-22 Identities = 19/147 (12%), Positives = 39/147 (26%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P + + R L + + Y + G G + + P+ Sbjct: 1 ERPGTVVVDTRSRFLYVVEQGGSAM-----RYGVGIGRDGFAWSGEGVIQWRQKWPKWTP 55 Query: 69 SVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 + P+ Y + + G N Y +HG+ V Sbjct: 56 PDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + + +++ V Sbjct: 116 SSGCVRLMNQDVIDLYDRVPQKARVVV 142 >gi|71674299|ref|ZP_00672046.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 216 Score = 106 bits (266), Expect = 3e-22 Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 29/151 (19%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 ++ V + + ER++ +++ + + + SYP+ G + Sbjct: 78 FQKYLGIKAEELVRVVLRIGERRVYVYEGE-----KEVASYPVAVGKPGW---------E 123 Query: 63 SPEGFYSVQPNQLNPDSRYYLA---INIGFPNAYDRAHGYTGKY----LMIHGAC----- 110 +P+G + V NP + + G A + HG Sbjct: 124 TPKGNFKVIQMVENPKWQNPWTGEVMPAGPNTALGLRWIGFWTDGKDSIGFHGTPTVGSI 183 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC M + + ++F V+ Sbjct: 184 GSAASHGCVRMYNEDVIKLFQKVQVGTEVVV 214 >gi|24373740|ref|NP_717783.1| hypothetical protein SO2183 [Shewanella oneidensis MR-1] Length = 171 Score = 106 bits (266), Expect = 3e-22 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 26/155 (16%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + L G + I K E + L + + +++K Y I G K EGD + Sbjct: 22 PQVLASSGIGKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQR 76 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------- 108 +P+G Y + + + S YY +I+I +PN D+ G +MIHG Sbjct: 77 TPQGRYILDYKKSD--SAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPP 134 Query: 109 -----ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+A++DE++ V + Sbjct: 135 EQAQQYNWTDGCIAITNAEMDEVWKAVDEGTPIEI 169 >gi|69935091|ref|ZP_00630071.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 209 Score = 106 bits (265), Expect = 3e-22 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 30/160 (18%) Query: 1 PVSKELKQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 P+ + Q P +P+ I + K R++ +++ +++ I G K Sbjct: 56 PIFQRPPVQ-PEAPIASPVRRILVEKSARRMTVYQESGPP-----RTFRIALGFSPEGDK 109 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC 110 REGD ++PEG + + +LN S Y+L++ I +P + R G +MIHG Sbjct: 110 SREGDGRTPEGIFRID--RLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIHGQP 167 Query: 111 ------------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+ +A+I+EIFA R Sbjct: 168 NQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHARIGTEVEI 207 >gi|1742774|dbj|BAA15464.1| Probable carnitine operon oxidoreductase CaiA (EC 1.3.99.-). [Escherichia coli] Length = 500 Score = 106 bits (265), Expect = 3e-22 Identities = 33/174 (18%), Positives = 46/174 (26%), Gaps = 47/174 (27%) Query: 1 PVSKE-------LKQQLPGSPV-YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL 52 PV K + LP +P I + E +L + +++ YPI GL Sbjct: 74 PVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGEN----IVQVYPIGIGLQGL 129 Query: 53 GPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAI---------------NIGFPNAYDRAH 97 ++P V NP I G N R Sbjct: 130 ---------ETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA 180 Query: 98 GY---TGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +IHG S GC M I +F+ VR Sbjct: 181 LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVID 234 >ErfK_YbiS_YhnG_Q98CS5_116-254_PF03734.4 Length = 139 Score = 106 bits (265), Expect = 3e-22 Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P I + +ER L L + Y + G G + + P Sbjct: 1 EAPGTIVVHLKERMLYLVQPGGDAI-----RYGVGIGKDGFRWSGRANIQYGREWPTWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYTG-----KYLMIHGAC--------VSVG 114 + Q P+ ++ G N Y IHG+ +S G Sbjct: 56 PPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSPEWWSIGQAMSSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C + + I ++++ V Sbjct: 116 CVRLINQDIIDLYSRVSKKNPVVV 139 >ErfK_YbiS_YhnG_Q87JV3_25-163_PF03734.4 Length = 139 Score = 106 bits (265), Expect = 3e-22 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 2 AVDLVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY 56 Query: 73 NQLNPDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGA--------------CVSV 113 + S +Y +++I +P+A D R G + IHG + Sbjct: 57 VIED--SAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTN 114 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE V Sbjct: 115 GCIALTNEEMDEFIQLVTMGTPITI 139 >gi|68003974|ref|ZP_00536473.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 175 Score = 106 bits (265), Expect = 4e-22 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 26/154 (16%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 ++ P + + ++K +R LEL + LI+SY + +GPK R GDF++ Sbjct: 27 QDPDLASPPTVDRVVVYKSKRLLELRSGQN-----LIRSYRVALGRNPVGPKVRAGDFRT 81 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHGAC-------- 110 PEG Y + L SR++ +I+I +PN D A G +MIHG Sbjct: 82 PEGIYRLDRRSLQ--SRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGP 139 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC A+T+A++ EI+ VR+ Sbjct: 140 SHASFDWTKGCIAVTNAEMTEIWHLVRNGTPIEI 173 >ErfK_YbiS_YhnG_Q92TA3_134-276_PF03734.4 Length = 143 Score = 106 bits (264), Expect = 4e-22 Identities = 22/148 (14%), Positives = 36/148 (24%), Gaps = 26/148 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + R L Y I G G + P Sbjct: 1 ERPGTIVVNTPSRFLYYVLPGGKAV-----RYGIGVGKQGFAWEGEAYVAWKQEWPTWHP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC--------VS 112 + + P+ Y+ + G N Y +HG S Sbjct: 56 PKEMAERKPEVARYVEAGMGPGISNPLGARALYLFNKEGRDTLFRLHGTPEWSSIGTAAS 115 Query: 113 VGCYAMTDAQIDEIFAFVRDA--FVGGQ 138 GC + + I ++++ VR Sbjct: 116 SGCIRLMNQDIMDLYSRVRPGRNARVVV 143 >gi|75855231|ref|ZP_00762889.1| COG3034: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25] Length = 153 Score = 106 bits (264), Expect = 5e-22 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + +++ K +R++ L + + ++K Y I + G K+ EGD ++PEG Y++ Sbjct: 14 AVDLVKVDKSKRRMYLME-----QGTILKEYRIALGASPKGHKQEEGDNRTPEGEYTLDY 68 Query: 73 NQLNPDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGA--------------CVSV 113 + S +Y +++I +P+A D R G + IHG + Sbjct: 69 VIED--SAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTN 126 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE V Sbjct: 127 GCIAITNEEMDEFIQLVEMGTPIQI 151 >gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Bradyrhizobium japonicum USDA 110] Length = 541 Score = 106 bits (264), Expect = 5e-22 Identities = 23/157 (14%), Positives = 49/157 (31%), Gaps = 22/157 (14%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 V+++ P P+ I + + +K+ ++ + P+ G Sbjct: 80 VAEKEVGTKPQGPLVIVVSIDRQKVTVYDTNG-----VFAESPVSTGMKG---------H 125 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 +P G +SV S Y + + + + + G S GC M A Sbjct: 126 STPMGVFSVIQKHKFHHSNIYSGAPMPYMQRITWSGVAMHAGV-LPGYPASHGCIRMPMA 184 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 +++ + + + P MT + Q Sbjct: 185 FAVKMWNWTKMGARV-------IVSPGEMTPHSFQHP 214 >ErfK_YbiS_YhnG_Q5PG17_96-233_PF03734.4 Length = 138 Score = 106 bits (264), Expect = 5e-22 Identities = 23/137 (16%), Positives = 34/137 (24%), Gaps = 19/137 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGDFQSPEGFYSVQ 71 I I E +L + L PI G + E P + + Sbjct: 6 IIINSAEMRLYYYPKGTNTVIVL----PIGIGQLGKDTPINWTTKVERKKAGPTWTPTAK 61 Query: 72 PN--QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDA 121 + + G N Y G+ IHG S GC + + Sbjct: 62 MHTEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRND 121 Query: 122 QIDEIFAFVRDAFVGGQ 138 I +F V Sbjct: 122 DIKFLFENVPVGTRVQF 138 >gi|23347356|gb|AAN29495.1| conserved hypothetical protein [Brucella suis 1330] Length = 238 Score = 106 bits (264), Expect = 5e-22 Identities = 24/157 (15%), Positives = 37/157 (23%), Gaps = 25/157 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + + P I I R L Y + G G + Sbjct: 86 LRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQAL-----RYGVGIGREGFAWSGRAVIQ 140 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGA 109 Q P + P+ Y A + G N Y +HG Sbjct: 141 YKRQWPRWTPPDEMVARQPELVQYSAKNGGMAPGLKNPLGARALYIFKDGKDTLYRLHGN 200 Query: 110 C--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + I +++ V Sbjct: 201 PEWWSIGKAVSSGCVRFLNQDIIDLYDRVPAKTPILV 237 >ErfK_YbiS_YhnG_Q98KE1_92-230_PF03734.4 Length = 139 Score = 106 bits (264), Expect = 5e-22 Identities = 20/144 (13%), Positives = 37/144 (25%), Gaps = 22/144 (15%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP---KRREGDFQSPEGFY 68 P I + E L L + Y + G G + + P Sbjct: 1 EKPGTIVVDVSEHFLYLVRDGGKAI-----RYGVSLGKAGFGWTGSAVVQARKKWPVWTP 55 Query: 69 SVQPNQLNPDS-RYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC--------VSVG 114 + Q P+ ++ + G + Y +HG S G Sbjct: 56 PPEMIQRRPELAKFKDGMPPGPQSPLGARALYLFRDGKDTMYRLHGTPEWDSIGKNASSG 115 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C + I ++++ V Sbjct: 116 CVRFMNQDIIDLYSRVNGPAQVFV 139 >gi|67939765|ref|ZP_00532254.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 192 Score = 106 bits (264), Expect = 5e-22 Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 26/143 (18%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + K ER L L+ +KSY I +G K R+GD ++PEG YS+ Sbjct: 55 DSLVAQKGERLLHLYSG-----GAAVKSYRIALGFNPVGAKLRQGDGKTPEGRYSISE-- 107 Query: 75 LNPDSRYYLAINIGFP-----NAYDRAHGYTGKYLMIHGAC--------------VSVGC 115 NP S Y+L++ I +P N +A G + IHG + GC Sbjct: 108 RNPQSSYHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGC 167 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 A+T+ +I+E++ V Sbjct: 168 IAVTNDEIEELWKAVPVGTPVII 190 >gi|69943270|ref|ZP_00634925.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS-217] Length = 181 Score = 105 bits (263), Expect = 6e-22 Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + K ++ + + + + IKSY I G K +EGD ++P+G Y + Sbjct: 42 KVDLVVVNKSASRMSIIR-----DGKTIKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDY 96 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVSV 113 + + S +Y +I+I +PN D+ G +MIHG + Sbjct: 97 KKSD--SAFYKSIHISYPNEEDKLRADALGISPGGMIMIHGENPKSTLPPEEAQKYNWTN 154 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE++ + Sbjct: 155 GCIAVTNKEMDELWRMIEPGTPIEI 179 >gi|68247539|gb|EAN29624.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 415 Score = 105 bits (263), Expect = 6e-22 Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 14/145 (9%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP-- 72 I + +L L+ G +LI Y I G K ++GD ++P G Y V Sbjct: 153 HVIAVDLTRSRLFLFD-NREGMPKLIADYYISSGKKGA-EKIKQGDKRTPAGLYYVTEYI 210 Query: 73 -NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA---------CVSVGCYAMTDAQ 122 + PD A+ I +PN +DR H TG + +HG S GC A+T+ Sbjct: 211 PGEKLPDLYGAGAMPINYPNEWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLD 270 Query: 123 IDEIFAFVRDAFVGGQPSVQVSIYP 147 +E+ + I P Sbjct: 271 FEELEEKTSIGTPVLLSKRLLWIKP 295 >gi|69927652|ref|ZP_00624813.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 249 Score = 105 bits (263), Expect = 6e-22 Identities = 20/156 (12%), Positives = 35/156 (22%), Gaps = 26/156 (16%) Query: 3 SKELKQQLP--GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKW---SGGLGPKRR 57 + +P I + + L Y I G + Sbjct: 80 FRRAIVDYHRKETPGSIMVDSDNHYLYYVLDGGKAI-----RYGITVGEEAMAWSGIAKV 134 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC-- 110 + P + + G N Y IHG Sbjct: 135 GAKTEWPSWHPTPGEIAR---LGVPKYVAPGPDNPMGSRALYLYANGKDTLFRIHGTNQP 191 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 +S GC MT+ + +++ V+ V Sbjct: 192 EYIGASISSGCIRMTNEDVIDLYDRVKMGTVVVVLE 227 >gi|23129994|ref|ZP_00111815.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 351 Score = 105 bits (262), Expect = 7e-22 Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 29/153 (18%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + +L + + +R+ ++ ++I SYPI G + Sbjct: 213 APSASDRLADRKTQVVVDLSDRRTYVYAGD-----EVIASYPIAVGKKGW---------E 258 Query: 63 SPEGFYSVQPNQLNPDSRYYLA---INIGFPNAYDRAHGYTGKY----LMIHGAC----- 110 +P G + V + P R+ + G + + HG Sbjct: 259 TPTGSFQVIHMRHYPIWRHPITGKVFQAGTDSPLGDRWIGFWSDGRNEIGFHGTPDIDLV 318 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC M ++ + ++ V + Sbjct: 319 GTAVSHGCLRMRNSDVRMLYEQVSIGTTVLVRN 351 >gi|57240547|ref|ZP_00368496.1| conserved hypothetical secreted protein, putative [Campylobacter lari RM2100] Length = 323 Score = 105 bits (262), Expect = 8e-22 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 31/201 (15%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ + ++ G + + G K EGD ++P GFY Sbjct: 60 YEENVAIVLTNKSDKIIRVYHYNDGKVEKKFIQKDVLTGLA--GDKEIEGDLKTPIGFYE 117 Query: 70 VQPNQLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAM 118 + + P YY A +PN D+ G TG + IHG + + GC A+ Sbjct: 118 LG-KKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAV 176 Query: 119 TDAQIDEI---------FAFVRDAFVGGQPSVQVSIYPFRMTD--ANMQRHRNSPNYDFW 167 + +++ +A + +V+I + + Q+ S F+ Sbjct: 177 QNDLLEDFNKLVADRKSYAMTEEKNKVRANHEEVAILLANLFAWKDSWQKSDISKYLSFY 236 Query: 168 KQL------KPGYDYFEQTRK 182 Q K Y+ F + ++ Sbjct: 237 DQKIFKHNNKFSYEQFAKNKQ 257 >gi|74021801|ref|ZP_00692387.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens DSM 15236] Length = 414 Score = 105 bits (262), Expect = 9e-22 Identities = 40/201 (19%), Positives = 65/201 (32%), Gaps = 26/201 (12%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + + + I I +L L + + G LI Y + GL K EGD Sbjct: 141 LPSQFLALSARNKHAIAIDASRSRLYLLENRPTGL-TLIADYYVSIGKSGLS-KNAEGDL 198 Query: 62 QSPEGFYSVQPN---QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-------- 110 ++P G Y + N + D A+ I +PN D G TG + +HG Sbjct: 199 RTPMGVYFITSNLDPKSLKDFYGSGALPINYPNVLDNLRGKTGGGIWLHGTPPGQFSRPP 258 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVS----------IYPFRMTDANMQRHR 159 + GC + + + + V S + PF Q + Sbjct: 259 LATDGCVVLANPDLMALIRTVEVRTTPVVISQSLKWVTPNTARSESKPFEEALTAWQNAK 318 Query: 160 NSPNYDFWKQLKPGYDYFEQT 180 +S N + + L F Sbjct: 319 SSGNMN--QVLSFYSPSFNSN 337 >ErfK_YbiS_YhnG_Q6ND97_41-173_PF03734.4 Length = 133 Score = 104 bits (261), Expect = 1e-21 Identities = 28/139 (20%), Positives = 42/139 (30%), Gaps = 18/139 (12%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 SP I + ER+L L YP+ G G + +G F++P Sbjct: 1 YSPGTIVVRTGERRLYLVVEPGHAV-----RYPVGVGKAGKQWAGVTKIDGKFRNPAWAP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGAC--------VSVGCYAMT 119 + + P + N A G IHG VS GC M Sbjct: 56 PAEVKRDVPTIP-DVIPGGSPANPMGVAAMTLAGGEYAIHGTNRPQSIGGFVSYGCIRML 114 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + I +++ V Sbjct: 115 NDDITDLYERVPVGTQVVV 133 >gi|48848900|ref|ZP_00303144.1| COG3034: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 167 Score = 104 bits (261), Expect = 1e-21 Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 23/151 (15%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDFQSP 64 + P +R+ K R+L L + ++S+ I LG KR EGD ++P Sbjct: 22 ANEIRPEDIASVRVEKSARRLLLLD----ADGATLRSFSNIQLGDAPLGHKRFEGDERTP 77 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGAC--------- 110 EG Y + N S Y+L+++I +P+A D G + IHG Sbjct: 78 EGRYVID--HGNARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFIHGQPNSLASGRIE 135 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 + GC A+++A+IDEI+A V D Sbjct: 136 GDWTDGCIALSNAEIDEIWALVGDGTPIEIV 166 >gi|68003733|ref|ZP_00536279.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 482 Score = 104 bits (260), Expect = 1e-21 Identities = 28/217 (12%), Positives = 51/217 (23%), Gaps = 47/217 (21%) Query: 1 PVSKELKQQLPGSPVY-IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 PV L LP +P I + +L +K + +YP+ Sbjct: 153 PVILPLSFVLPDTPRRGIVVNVATMRLFQYKGDGASL--AVSTYPVGVG---------TK 201 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGF---------------PNAYDRAHGY-TGKY 103 + +P G V P +I N Y + Sbjct: 202 ERPTPTGPTRVYRKAARPTWHVPASIAEDHRKKGDPLPPEVPPGPENPLGEYALYLSKPG 261 Query: 104 LMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANM 155 +IHG + GC + I+ ++ + I Sbjct: 262 YLIHGTNKPASIGLKATNGCMRLYPENIEVLYNDTPVNTPVAIVNQPYLI---------- 311 Query: 156 QRHRNSPNYDFWKQLKPGYDYFEQTRKPPTVSVCNGR 192 + + L E T+ + + Sbjct: 312 GQRDGVLYLEAHTPL-EDAGTLELTKVYEKLRAIEKK 347 >gi|15074222|emb|CAC45869.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 408 Score = 104 bits (260), Expect = 1e-21 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 39/207 (18%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 S +P+ + + ++++ L ++ ++ + + G Sbjct: 16 SPSALAAGAKTPLQVVVSRDQQSLVVYDGD-----TVVATSKVSTGKAG---------HA 61 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCY 116 +P G +S+ + +S Y P + + T + +HG S GC Sbjct: 62 TPTGIFSILEKRRRHESNIYS----NAPMPFMQRL--TWSGIALHGSNHVPDYPASHGCV 115 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSP---NYDFWKQLKPG 173 + +F I P + + + S L+P Sbjct: 116 RLPGKFAASLFKMTGYGMHVVISD--RQIAPVEVASEMLFQPSESRPKGPALSDVPLRPA 173 Query: 174 YDYFEQ--------TRKPPTVSVCNGR 192 F Q ++P V+ + Sbjct: 174 IGEFNQSAVEVAMTDKRPSPVASDEEK 200 >ErfK_YbiS_YhnG_Q6D900_96-233_PF03734.4 Length = 138 Score = 104 bits (260), Expect = 1e-21 Identities = 22/141 (15%), Positives = 32/141 (22%), Gaps = 19/141 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGDFQSPEGF 67 I I E +L + + + PI G + P Sbjct: 2 PREGIVINSAEMRLYYYPKGS----KTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT 57 Query: 68 YSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYA 117 + + + L G N Y G IHG S GC Sbjct: 58 PTAKMHAEYAARGETLQKVFPAGPDNPMGLYALYIGNLYAIHGTNANFGIGLRVSHGCVR 117 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 + I +F V Sbjct: 118 LRADDIKYLFNSVPVGTRVQF 138 >ErfK_YbiS_YhnG_Q6MQC2_73-213_PF03734.4 Length = 141 Score = 104 bits (260), Expect = 1e-21 Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 28/144 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + K++R+L L L+++Y + +G K+ EGD ++PEG YS+ Sbjct: 5 RIVVSKDKRQLYLVSGD-----TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK-- 57 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGAC----------------VSVG 114 NP S++ ++++ +PN D A+ + G +MIHG ++G Sbjct: 58 NPKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C A+T+ +I+EI+A V++ + Sbjct: 118 CIAVTNKEIEEIYALVKERTLVEV 141 >ErfK_YbiS_YhnG_Q57EH0_96-237_PF03734.4 Length = 142 Score = 104 bits (259), Expect = 2e-21 Identities = 24/145 (16%), Positives = 34/145 (23%), Gaps = 25/145 (17%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYSV 70 P I I R L Y + G G + Q P Sbjct: 3 PGTIVIDTANRFCYLVLDNGQAL-----RYGVGIGREGFAWSGRAVIQYKRQWPRWTPPD 57 Query: 71 QPNQLNPDSRYYLA----INIGFPNAYDRAHGYT-----GKYLMIHGAC--------VSV 113 + P+ Y A + G N Y +HG VS Sbjct: 58 EMVARQPELVQYSAKNGGMAPGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGKAVSS 117 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + I +++ V Sbjct: 118 GCVRFLNQDIIDLYDRVPAKTPILV 142 >gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 186 Score = 104 bits (259), Expect = 2e-21 Identities = 23/153 (15%), Positives = 41/153 (26%), Gaps = 29/153 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ G P +I + K KL + ++ K +P+ + Sbjct: 15 PIWPLGDNPRAGDP-FIIVNKATNKLAYID-----DGKIQKVFPVATGK---------TN 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGAC---- 110 +PEG + + +P N G IHG Sbjct: 60 ELTPEGTFDIVMKAKDPYYIAKDIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSS 119 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC M ++ +F + Sbjct: 120 IGKYISQGCIRMKKNDVEYLFDRIPIGTKVSIV 152 >ErfK_YbiS_YhnG_Q8UKC7_90-231_PF03734.4 Length = 142 Score = 104 bits (259), Expect = 2e-21 Identities = 21/147 (14%), Positives = 36/147 (24%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 +P + + R L L + Y + G G P Sbjct: 1 EAPGTVVVDTPRRFLYLVENGGTAL-----RYGVGIGRDGFSWEGNGYIHWRQHWPRWKP 55 Query: 69 SVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 + P+ Y ++ G N Y +HG V Sbjct: 56 PSEMIARQPELEKYSVANGGMDPGLHNPLGARALYIFQNGEDTLYRLHGNPEWQSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + I +++ V Sbjct: 116 SSGCVRLMNQDIVDLYDRVPFHAPIVV 142 >gi|67916612|ref|ZP_00510315.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 255 Score = 104 bits (259), Expect = 2e-21 Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 36/144 (25%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 YI I +E KL L+K + L+K+YP+ + SPEG + + Sbjct: 59 YYIYINLDELKLYLYK-----DGVLLKTYPVSGGKP---------ETPSPEGTWKIISKS 104 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA---------CVSVGCYAMTDAQIDE 125 + + + P IHG S GC M + E Sbjct: 105 DWGGNFGGSWMGLNVP----------WGQYGIHGTKYPWYIGRQNASHGCIRMYNKNAKE 154 Query: 126 IFAFVRDAFVGGQPSVQVSIYPFR 149 ++ V + PF+ Sbjct: 155 LYDIVPYGTIVTIVH---KNRPFK 175 >ErfK_YbiS_YhnG_Q8UJ84_117-259_PF03734.4 Length = 143 Score = 104 bits (259), Expect = 2e-21 Identities = 23/148 (15%), Positives = 38/148 (25%), Gaps = 26/148 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + +R L + Y I G G + P Sbjct: 1 ERPGTIIVNTRDRYLYYIMSGNRAV-----RYGIGVGKAGFAWAGEAYVAWKQEWPMWHP 55 Query: 69 SVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYT------GKYLMIHGAC--------VS 112 + P+ Y+ + G N Y IHG+ S Sbjct: 56 PKEMADRKPEVAKYVEAGMGPGLSNPLGARAMYLFNEKGQDTLFRIHGSPEWASIGTAAS 115 Query: 113 VGCYAMTDAQIDEIFAFVRDA--FVGGQ 138 GC M + + ++++ VR Sbjct: 116 SGCIRMINQDVIDLYSRVRPGRSTKVVV 143 >gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120] Length = 272 Score = 103 bits (258), Expect = 2e-21 Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 29/139 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R+ ++ + +I SYPI G ++P G ++V + + Sbjct: 148 VVVDLSDRRTYVYAGDI-----VIASYPIAIGKRGW---------ETPTGTFNVSHMEHD 193 Query: 77 PDSRYYLA---INIGFPNAYDRAHGYTGKY----LMIHGACV--------SVGCYAMTDA 121 P R+ + G + + HG S GC M ++ Sbjct: 194 PIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGTAISHGCLRMRNS 253 Query: 122 QIDEIFAFVRDAFVGGQPS 140 + ++ V Sbjct: 254 DVRLLYDQVELGTPVIVQD 272 >gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Bacillus subtilis subsp. subtilis str. 168] Length = 176 Score = 103 bits (258), Expect = 2e-21 Identities = 30/154 (19%), Positives = 46/154 (29%), Gaps = 29/154 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ + LPG P I + K +L + ++ Y + D Sbjct: 14 PIWPLGENPLPGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGK---------TD 58 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC---- 110 +PEG +SV NP R N G G+ IHG Sbjct: 59 DLTPEGEFSVTVKAENPYYRKKNIEGGSPDNPLGARWIGFDAKGTDGRIYGIHGTNREES 118 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 VS GC M + ++ +F + Sbjct: 119 VGKFVSNGCIRMHNDEVVHLFQTIPVGTRVLITD 152 >gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str. N16961] Length = 194 Score = 103 bits (258), Expect = 2e-21 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 26/145 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +++ K +R++ L + ++I+ Y I G K++EGD ++PEG Y + Sbjct: 55 QVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF 109 Query: 73 NQLNPDSRYYLAINIGFPNAYD-----RAHGYTGKYLMIHGA--------------CVSV 113 + S +Y +I+I +PN D G + IHG + Sbjct: 110 IIED--SSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTN 167 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+ ++DE + V+ Sbjct: 168 GCIAITNQEMDEFLSLVQPGVPILI 192 >ErfK_YbiS_YhnG_Q8EF19_31-169_PF03734.4 Length = 139 Score = 103 bits (257), Expect = 3e-21 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + I K E + L + + +++K Y I G K EGD ++P+G Y + Sbjct: 1 GKVDLVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILD 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHG-----YTGKYLMIHG--------------ACVS 112 + + S YY +I+I +PN D+ G +MIHG + Sbjct: 56 YKKSD--SAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+T+A++DE++ V + Sbjct: 114 DGCIAITNAEMDEVWKAVDEGTPIEI 139 >ErfK_YbiS_YhnG_Q82U48_98-240_PF03734.4 Length = 143 Score = 103 bits (257), Expect = 3e-21 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 34/151 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + I E +L + G+ I ++P+ D+ +P G ++ Sbjct: 2 ERIGLVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---------DWNTPLGRTTIVR 52 Query: 73 NQLNPDSRYYLAI----------------NIGFPNAYDRAHGYTG-KYLMIHGAC----- 110 Q +P ++ G N R Y G +IH Sbjct: 53 KQKDPTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYALYLGLPGYLIHSTNKPFGV 112 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 V+ GC + I+E+F V Sbjct: 113 GMRVTHGCMRLYPEDIEELFNLVPTGTPVQI 143 >ErfK_YbiS_YhnG_Q6D623_94-234_PF03734.4 Length = 141 Score = 103 bits (257), Expect = 3e-21 Identities = 20/144 (13%), Positives = 34/144 (23%), Gaps = 22/144 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREGDFQSPEGFY 68 I + E +L + + YPI G L ++P Sbjct: 2 PREGIVVNLAELRLYYYPKGKNT----VIVYPIGIGQLGRNTPLMTTSVSEKRENPTWTP 57 Query: 69 SVQPNQ---LNPDSRYYLAINIGFPNAYDRAHGYT---GKYLMIHGACV--------SVG 114 + + + + G N G ++HG S G Sbjct: 58 TANIRKHYLEEQGIKLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNADFGIGMRVSSG 117 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C + I +F V Sbjct: 118 CIRLRPDDIKALFDNVPVGTRVQI 141 >gi|67916555|ref|ZP_00510261.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 289 Score = 103 bits (257), Expect = 3e-21 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 33/136 (24%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 S V I + + L L++ + +L+KSYP+ +P G +++ Sbjct: 178 APSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGKPTT---------PTPRGTFTI 223 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 Q+NP + R G + + IHG S GC M + Sbjct: 224 INKQVNPGGPFG-----------TRWMGLSQPHYGIHGTNNPASIGTAASNGCIRMYNED 272 Query: 123 IDEIFAFVRDAFVGGQ 138 ++E+F V Sbjct: 273 VNELFNLVSVGTPVTI 288 >ErfK_YbiS_YhnG_Q89RZ1_67-201_PF03734.4 Length = 135 Score = 102 bits (256), Expect = 3e-21 Identities = 20/143 (13%), Positives = 34/143 (23%), Gaps = 24/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKW---SGGLGPKRREGDFQSPEGFY 68 SP I + + L Y I G + + P Sbjct: 1 ESPGSIVVDSDNHYLYYVLDGGKAI-----RYGITVGEEAMAWSGIAKVGSMTEWPAWHP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGC 115 + Y + G N Y IHG +S GC Sbjct: 56 TPGEISRLGVPTY---VAPGPDNPMGSRAMYLYSGGKDTLFRIHGTNQPEYIGASISSGC 112 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 +T+ +++ V+ + Sbjct: 113 IRLTNEDAIDLYGRVKVGTIVVV 135 >gi|67928661|ref|ZP_00521848.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 182 Score = 102 bits (256), Expect = 3e-21 Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 24/146 (16%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + Q I + +RKL + + ++++ + + SP Sbjct: 27 AQDQNTRPARRIVVSIPDRKLAVMEDD-----RVLRVFETAVGAP---------KSPSPT 72 Query: 66 GFYSVQPNQLNPDSR-YYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGC 115 G Y++ + +P + G N G + K IHG S GC Sbjct: 73 GTYTIINSIADPTWYTKGKIVPPGKCNPLGTRWLGLSVKGYGIHGTNVPSSIGRNASHGC 132 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSV 141 M + ++E+F V Sbjct: 133 IRMRNRDVEELFKMVAVGDQVELRGE 158 >DUF949_Q6LJZ6_66-236_PF06104.2 Length = 171 Score = 102 bits (256), Expect = 4e-21 Identities = 58/169 (34%), Positives = 82/169 (48%), Gaps = 12/169 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW + IK Y I K SG GPK REGD Sbjct: 2 MFEQVGVQYPPEQIAMFALKEEMQVELWAKDGEA-WVYIKRYDIAKISGKSGPKLREGDH 60 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 61 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 118 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNY 164 AM D I+E+F V +VQV I P + P + Sbjct: 119 LAMGDIAIEELFLLVE---RAQIQNVQVVISPSDPRKGPLVPAYGQPFW 164 >ErfK_YbiS_YhnG_Q989D5_60-195_PF03734.4 Length = 136 Score = 102 bits (256), Expect = 4e-21 Identities = 24/143 (16%), Positives = 39/143 (27%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RREGDFQSPEGFY 68 P I I K E+ L L + Y I G G + + P+ Sbjct: 1 EQPGTIIIRKSEKALYLVTRQGQAL-----RYQISVGRDGFGWTGVVKVGAKTEWPQWRP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT-----GKYLMIHGACV--------SVGC 115 + P+ + G N Y IHG + GC Sbjct: 56 PREMRARQPELPE--LVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGVGFDGTSGC 113 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 + +T+ + ++F V Sbjct: 114 FRLTNTDVIDLFKRVPVGTKVVV 136 >gi|23127349|ref|ZP_00109222.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 179 Score = 102 bits (256), Expect = 4e-21 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 17/130 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P +I I E++L W+ K +L+ SY I +P G + + Sbjct: 63 QPRWIEIDLSEQRLRAWEGK-----KLVYSYRISGGK---------RSTPTPIGRFRINS 108 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P GY H G VS GC + Q ++ + Sbjct: 109 KYRTHRMRGRGYNIPDVPYTMYFYRGYAIHGAYWHNRFGTPVSHGCVNLPVKQARNVYNW 168 Query: 130 VRDAFVGGQP 139 + Sbjct: 169 ASYGTLVVVR 178 >gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter pomeroyi DSS-3] Length = 185 Score = 102 bits (256), Expect = 4e-21 Identities = 22/159 (13%), Positives = 40/159 (25%), Gaps = 26/159 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRR 57 P + ++ + P + I L + Y G G Sbjct: 31 PTPQVVRIKKQFEPGRLLILPRSFYLYYVTEEREAI-----RYGCGVGKAGLEFTGTATI 85 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYL-----AINIGFPNAYDRAHGYT-----GKYLMIH 107 + + P + + + +P + G N Y Y IH Sbjct: 86 DVKKEWPTWRPTPEMIERDPRTYAKFVDNNYIQPGGPENPLGARALYLFQNGVDTYFRIH 145 Query: 108 GA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G S GC M + + +++ V V Sbjct: 146 GTTQPQTIGHAASNGCIRMLNEHVIDLYNRVPLGTVVTV 184 >ErfK_YbiS_YhnG_Q73D94_22-142_PF03734.4 Length = 121 Score = 102 bits (255), Expect = 5e-21 Identities = 20/135 (14%), Positives = 35/135 (25%), Gaps = 23/135 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I + +L ++ K++P+ +PEG + + Sbjct: 1 TDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGNFCIIT 46 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYAMTDAQI 123 N + N G IHG S GC M D I Sbjct: 47 KFKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDI 106 Query: 124 DEIFAFVRDAFVGGQ 138 ++ V+ Sbjct: 107 QWLYDRVQLQTKVII 121 >gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Bradyrhizobium japonicum USDA 110] Length = 171 Score = 102 bits (255), Expect = 5e-21 Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 18/131 (13%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGF 67 SP I + ER+L L YP+ G G R +G +++P Sbjct: 36 DYSPGTIVVKTNERRLYLILDDGHAV-----RYPVGVGKSGKQWAGTTRIDGKYRNPAWS 90 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYD-RAHGYTGKYLMIHGACV--------SVGCYAM 118 + + P + N A G IHG V S GC M Sbjct: 91 PPAEVKRDKPQLP-DVIPGGSPRNPMGVAAMTLAGGEYAIHGTNVPGSVGGFVSYGCIRM 149 Query: 119 TDAQIDEIFAF 129 + I ++++ Sbjct: 150 LNDDITDLYSR 160 >gi|75675776|ref|YP_318197.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 493 Score = 102 bits (254), Expect = 6e-21 Identities = 22/150 (14%), Positives = 44/150 (29%), Gaps = 22/150 (14%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 + P P+ I + + ++++ L P+ G +P G + Sbjct: 102 RKPNGPIIIAVSIRRQTMKVYDGNG-----LFAETPVSTGMRG---------HSTPMGVF 147 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFA 128 SV + S Y + + + + G S GC M +++ Sbjct: 148 SVIQKRKWHRSNIYSNAPMPYMQRITWSGIAMHAG-ALPGYPASHGCIRMPLDFAVKMWG 206 Query: 129 FVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 + R I P +T A+ Sbjct: 207 WTRIGARV-------IITPGEVTPADFSHP 229 >gi|66856700|ref|ZP_00400762.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C] Length = 284 Score = 102 bits (254), Expect = 6e-21 Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 19/144 (13%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICK----WSGGLGPKRREGDFQSPEGFYSV 70 + + E +L A G + ++P+ + LG E SP + + Sbjct: 87 GTVVVNLSEMRLYYLPAGPGP----LLTFPVGVAVEAGATPLGVLTVEQKLVSPSWYPTP 142 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCYAMTDA 121 + +P+ A+ G N + L+IHG VS GC + Sbjct: 143 AIRREDPELP--AAVPPGPDNPLGSHALRLSAPTLLIHGTNRPYGVGRRVSHGCIRLYPE 200 Query: 122 QIDEIFAFVRDAFVGGQPSVQVSI 145 I + VR V + Sbjct: 201 DIPRLHRAVRLGTPVAIVREPVKV 224 >ErfK_YbiS_YhnG_Q8KR47_93-230_PF03734.4 Length = 138 Score = 102 bits (254), Expect = 7e-21 Identities = 24/136 (17%), Positives = 35/136 (25%), Gaps = 19/136 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----REGDFQSPEGFYSVQ 71 I + E +L + L PI G R E + P + Sbjct: 6 IIVNAAEMRLYYYPPGSNTVEVL----PIGIGQAGRETPRNWVTAVERKQEGPTWSPTPN 61 Query: 72 PNQLN--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 + + G N Y G+ IHG VS GC + + Sbjct: 62 TRRAYAAEGKTLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNSNFGIGLRVSQGCIRLRNN 121 Query: 122 QIDEIFAFVRDAFVGG 137 I +F V Sbjct: 122 DIKYLFDNVPVGTRVQ 137 >gi|68190214|gb|EAN04874.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 204 Score = 102 bits (254), Expect = 7e-21 Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 23/146 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 + + ++ I + ER L L + Y I GL G Sbjct: 54 LPQVVRTPYDYLAGTIIVVPRERFLYLVDGAGFA-----RRYGIGVGKAGLAFSGSAIIG 108 Query: 59 GDFQSPEGFYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGA-- 109 + P + + +P +RY + G N Y + IHG Sbjct: 109 RKAKWPSWRPTDNMIRRDPKKYARYAGGVPGGPNNPLGSRALYLYRNGRDTLYRIHGTTE 168 Query: 110 CV------SVGCYAMTDAQIDEIFAF 129 S GC M + +++++ Sbjct: 169 PWTIGKAVSNGCVRMVNEHVEDLYER 194 >ErfK_YbiS_YhnG_Q92TZ7_91-232_PF03734.4 Length = 142 Score = 102 bits (254), Expect = 7e-21 Identities = 19/147 (12%), Positives = 32/147 (21%), Gaps = 25/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 + + R L L + Y + G G P Sbjct: 1 EPAGTVVVDTPGRFLYLIEPGGTAM-----RYGVGIGREGFAWQGEGIIHWRQPWPRWKP 55 Query: 69 SVQPNQLNPDSRYYL----AINIGFPNAYDRAHGYT-----GKYLMIHGAC--------V 111 P+ Y + G N Y +HG V Sbjct: 56 PADMIARRPELEKYSVANGGMAPGIDNPLGARALYIFQNGQDTLYRLHGTPEWKSIGKAV 115 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + + +++ V Sbjct: 116 SSGCVRLVNQDVIDLYKRVPYHAPIVV 142 >gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 253 Score = 102 bits (254), Expect = 7e-21 Identities = 20/139 (14%), Positives = 35/139 (25%), Gaps = 23/139 (16%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 + I + +L ++ K++P+ +PEG + Sbjct: 18 AFANTDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGNF 63 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYAMT 119 + N + N G IHG S GC M Sbjct: 64 CIITKFKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMH 123 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 D I ++ V+ Sbjct: 124 DRDIQWLYDRVQLQTKVII 142 >gi|17133905|dbj|BAB76467.1| all4768 [Nostoc sp. PCC 7120] Length = 171 Score = 102 bits (254), Expect = 7e-21 Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 17/130 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I ++L W+ K +L+ S+ I +P G + + Sbjct: 55 QPRRIEIDLSAQRLFAWEGK-----KLVYSFRISTGK---------RSTPTPIGQFKINS 100 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P A GY H G VS GC + +++ + Sbjct: 101 KYRTNRMRGPGYDIPNVPYAMYFHRGYAIHGAYWHNRFGTPVSHGCVNLPVKLARKLYNW 160 Query: 130 VRDAFVGGQP 139 + Sbjct: 161 TTPGTLVIVR 170 >gi|69930773|ref|ZP_00627470.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 503 Score = 101 bits (253), Expect = 8e-21 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 22/150 (14%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 + P P+ I I + L+++ A L P+ G +P G + Sbjct: 102 RKPQGPIIIAISIRRQTLKVYDANG-----LFAETPVSTGMRG---------HSTPMGVF 147 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFA 128 SV Q S Y + + + + + G S GC M + +++ Sbjct: 148 SVIQKQKWHRSNIYSGAPMPYMQRITWSGIAMHAGV-LPGYPASHGCIRMPMSFAVKMWR 206 Query: 129 FVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 + R I P +T A Sbjct: 207 WTRIGARV-------IITPGEVTPAEFSHP 229 >gi|23473793|ref|ZP_00129088.1| COG3034: Uncharacterized protein conserved in bacteria [Desulfovibrio desulfuricans G20] Length = 429 Score = 101 bits (253), Expect = 9e-21 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 28/182 (15%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P ++ + K + L L++ ++ +Y G K+ EGD ++PEG Y V+ Sbjct: 41 PPRFVAVDKSRQTLFLYR--HSSPLEVSATYTCTTGQA-TGDKQVEGDLRTPEGVYFVEH 97 Query: 73 ---NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----AC-VSVGCYAMTDAQI 123 L+ D +A + +PN D TG + IHG + GC A+ A I Sbjct: 98 RIDKGLDWDLYGGIAYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADI 157 Query: 124 DEIFAFVRDAFVGGQ----------PSVQVSIYPFRMTDANMQ------RHRNSPNYDFW 167 + + + P + R+ Q + R+ +DF+ Sbjct: 158 EVLGPGLERGLPVIVAQGVNATGAQPEAERGAATARLLAQRSQQWAAAWQARSDDFFDFY 217 Query: 168 KQ 169 Sbjct: 218 AP 219 >gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] Length = 246 Score = 101 bits (251), Expect = 1e-20 Identities = 58/169 (34%), Positives = 82/169 (48%), Gaps = 12/169 (7%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + +++ Q P + + KEE ++ELW + IK Y I K SG GPK REGD Sbjct: 67 MFEQVGVQYPPEQIAMFALKEEMQVELWAKDGEA-WVYIKRYDIAKISGKSGPKLREGDH 125 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG------YTGKYLMIHGACVSVGC 115 Q PEG Y V LNP+S+Y+L++ + +PN +D + G + IHG SVGC Sbjct: 126 QVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFIHGKAKSVGC 183 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNY 164 AM D I+E+F V +VQV I P + P + Sbjct: 184 LAMGDIAIEELFLLVE---RAQIQNVQVVISPSDPRKGPLVPAYGQPFW 229 >ErfK_YbiS_YhnG_Q8Z5P0_93-230_PF03734.4 Length = 138 Score = 101 bits (251), Expect = 1e-20 Identities = 25/137 (18%), Positives = 35/137 (25%), Gaps = 19/137 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----REGDFQSPEGFYSVQ 71 I + E +L + A L PI G R E P + Sbjct: 6 IVVNVAEMRLYYYPAGTNTVEVL----PIGIGQAGRETPRNWVTAVERKQDGPVWVPTAN 61 Query: 72 PNQLNPDSRYYLA--INIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDA 121 + L + G N Y G+ HG S GC + + Sbjct: 62 TRREYAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVSQGCIRLRND 121 Query: 122 QIDEIFAFVRDAFVGGQ 138 I +F VR Sbjct: 122 DIKYLFDHVRVGTRVQI 138 >gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 101 bits (251), Expect = 1e-20 Identities = 21/149 (14%), Positives = 39/149 (26%), Gaps = 23/149 (15%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQ 62 + Q P I + + R L + Y + + G R + Sbjct: 59 VDYQRKEQPGTILVDTDARYLYFVLPEGKAI-----RYGVAVGEEAMAFSGVARVGRLAE 113 Query: 63 SPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC------- 110 P+ + Y + G N Y IHG Sbjct: 114 WPDWVPTADIQARL--GPYPARVAGGPANPLGARGIYLFVGNKDTLYRIHGTNQPEYIGQ 171 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 +S GC M + + +++ V+ + Sbjct: 172 AISSGCIRMRNEDVIDLYDRVKLNSMVVV 200 >ErfK_YbiS_YhnG_Q87G47_99-238_PF03734.4 Length = 140 Score = 100 bits (250), Expect = 2e-20 Identities = 26/148 (17%), Positives = 40/148 (27%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L + ++ +P+ G +P S+ + N Sbjct: 6 IVINLAELRLYYFPEGED----VVHVFPVGIGRIG---------RDTPVMTTSISQKRPN 52 Query: 77 PDSRYYLAI---------------NIGFPNAYDRAH---GYTGKYLMIHGAC-------- 110 P +I G N Y +IHG Sbjct: 53 PTWTPPASIRAEYRAKGVDLPAVVPAGPDNPLGLFALRLAYGNGEYLIHGTNKDFGIGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + I+ +F VR Sbjct: 113 VSAGCIRMDPSDIEWLFDKVRRGEKVNI 140 >gi|68247205|gb|EAN29293.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 362 Score = 100 bits (250), Expect = 2e-20 Identities = 24/145 (16%), Positives = 40/145 (27%), Gaps = 20/145 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEGFYSVQP 72 + I E +L +A ++++P+ G + +P + Sbjct: 135 LVINLPEMRLYHRRADGR-----LETFPVGIGREGFDTPISRAKIIRKKSAPSWYVPASI 189 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCYAMTDAQI 123 + NP I G N Y +IHG VS GC M I Sbjct: 190 REENPKLP--AVIPPGASNPLGSHAIYLSLPGYLIHGTNKPYGIGRRVSHGCIRMYPEDI 247 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPF 148 ++ R + F Sbjct: 248 PRLYTSARVGATVAIVNEPAKAGWF 272 >gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 253 Score = 100 bits (250), Expect = 2e-20 Identities = 20/139 (14%), Positives = 35/139 (25%), Gaps = 23/139 (16%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 + I + +L ++ K++P+ +PEG + Sbjct: 18 AFADTDHLILVNLTTNQLSFFENGNYT-----KTFPVTTGRDRT---------PTPEGNF 63 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYAMT 119 + N + N G IHG S GC M Sbjct: 64 CIITKFKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMH 123 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 D I ++ V+ Sbjct: 124 DRDIQWLYDRVQLQTKVII 142 >gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Synechococcus elongatus PCC 6301] Length = 208 Score = 100 bits (249), Expect = 2e-20 Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 29/138 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + +R++ +++ + I SYP+ G ++P G + V + Sbjct: 83 KLVLSLRQRRVTVYR-----DRLAIASYPVGIGKPGW---------ETPRGTFRVMSKIV 128 Query: 76 NPDSRYY---LAINIGFPNAYDRAHGYTGKY----LMIHGA--------CVSVGCYAMTD 120 NP ++ + G N + HG VS GC M + Sbjct: 129 NPTWQHPWNGSLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKN 188 Query: 121 AQIDEIFAFVRDAFVGGQ 138 I +F V + + Sbjct: 189 RDIRALFELVEEGAIVSV 206 >ErfK_YbiS_YhnG_Q5ZV45_94-231_PF03734.4 Length = 138 Score = 100 bits (249), Expect = 3e-20 Identities = 23/150 (15%), Positives = 43/150 (28%), Gaps = 37/150 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I E +L + ++ +YP+ G ++P G + Sbjct: 2 PRKGVVINLAEYRLYYFPPDDN----VVMTYPVGIGKKGW---------ETPLGLSRIIS 48 Query: 73 NQLNPDSRY---------------YLAINIGFPNAYDRAHGY-TGKYLMIHGAC------ 110 ++NP R G N + ++IHG+ Sbjct: 49 KEINPTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQHVLRLGWPAILIHGSNRVDGIG 108 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I+ +++ V Sbjct: 109 AKVSAGCIRMLPEDIEHLYSLVSVGTPVRI 138 >gi|71542295|ref|ZP_00663936.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 332 Score = 100 bits (249), Expect = 3e-20 Identities = 26/146 (17%), Positives = 41/146 (28%), Gaps = 35/146 (23%) Query: 6 LKQQLPGSPVY--IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 L+ I I RKL L + +L+K YP+ + Sbjct: 132 LQGDSQDKRGRLLIEIDVASRKLVL-----TEDGKLVKEYPVAVGKS---------KTPT 177 Query: 64 PEGFYSVQPNQLNP-DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 P G + V LN + + + P IHG S G Sbjct: 178 PLGEWKVVHKGLNWGNGFGTRWMGLNVP----------WGIYGIHGTNKPGSIGSYASHG 227 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPS 140 C M + ++E++ V Sbjct: 228 CIRMFNRHVEELYPLVPAGTRVRIVE 253 >gi|71546011|ref|ZP_00666893.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 223 Score = 99 bits (248), Expect = 3e-20 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 39/155 (25%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I ++K +R+L L L++ YPI G K GD ++PEG + + Sbjct: 74 KIYVYKSDRRLLLVNN-----GVLVREYPIGLGFSPNGDKFMRGDGRTPEGQFFICAK-- 126 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY----------------------------TGKYLMIH 107 NP+SR+Y ++ + +P+ G + IH Sbjct: 127 NPNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVLGGDIFIH 186 Query: 108 ----GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G + GC A+ ++ +DE+F+ V Sbjct: 187 GGGAGRDWTWGCVAVRNSAMDELFSIVSVGTPVEV 221 >ErfK_YbiS_YhnG_Q8EAY9_93-230_PF03734.4 Length = 138 Score = 99.5 bits (247), Expect = 4e-20 Identities = 22/141 (15%), Positives = 35/141 (24%), Gaps = 19/141 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR-----REGDFQSPEGF 67 I I E +L + + ++ PI G + +P Sbjct: 2 PREGIVINVAEMRLYYYPKGK----KTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWT 57 Query: 68 YSV-QPNQLNPDSRYYLAINI-GFPNAYDRAHGYTGKYLMIHGACVS--------VGCYA 117 + + A+ G N Y G IHG S GC Sbjct: 58 PTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIGLRVSQGCVR 117 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 + I+ +F V Sbjct: 118 LRHDDIEHLFKTVPIGTRVQF 138 >gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 309 Score = 99.5 bits (247), Expect = 4e-20 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 26/147 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y ++ Sbjct: 169 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIE 223 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 224 --GRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 281 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC A+TD +I+EI + V Sbjct: 282 QGCIAVTDEEIEEIAEAAPNGTVVEIR 308 >gi|39936101|ref|NP_948377.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 537 Score = 99.5 bits (247), Expect = 4e-20 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 32/159 (20%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 E + P PV I + E++KL ++ A L P+ G +P Sbjct: 93 EKQATKPQGPVVIAVSIEQQKLRVYDANG-----LFAETPVSTGMRG---------HSTP 138 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMT 119 G +SV S Y G P Y + T + +H G S GC M Sbjct: 139 MGVFSVIQKSKYHRSNIYS----GAPMPYMQR--ITWSGIALHAGALPGYPASHGCIRMP 192 Query: 120 DAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 +++ + R + P +T + Sbjct: 193 MTFAVKMWGWTRMGARV-------IVAPGDVTPVSFSHP 224 >ErfK_YbiS_YhnG_Q8YS14_144-270_PF03734.4 Length = 127 Score = 99.1 bits (246), Expect = 5e-20 Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 29/137 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + +R+ ++ + +I SYPI G ++P G ++V + + Sbjct: 5 VVVDLSDRRTYVYAGDI-----VIASYPIAIGKRGW---------ETPTGTFNVSHMEHD 50 Query: 77 PDSRYYLA---INIGFPNAYDRAHGYTGKY----LMIHGACV--------SVGCYAMTDA 121 P R+ + G + + HG S GC M ++ Sbjct: 51 PIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGTAISHGCLRMRNS 110 Query: 122 QIDEIFAFVRDAFVGGQ 138 + ++ V Sbjct: 111 DVRLLYDQVELGTPVIV 127 >ErfK_YbiS_YhnG_Q8D0M4_96-235_PF03734.4 Length = 140 Score = 99.1 bits (246), Expect = 5e-20 Identities = 24/152 (15%), Positives = 34/152 (22%), Gaps = 39/152 (25%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I I E +L + + YPI G +P S+ Sbjct: 2 PREGIVINLAELRLYYYPKGQNK----VIVYPIGIGQLG---------RDTPTMVTSISQ 48 Query: 73 NQLNPDSRYYLAI---------------NIGFPNAYDRAHGYTGKY---LMIHGACV--- 111 NP I G N + +IHG Sbjct: 49 KIPNPTWTPTANIRKNYLAEGITLPSVVPAGPDNPMGQFALRLSAGRGEYLIHGTNADFG 108 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + I+ +F V Sbjct: 109 IGLRVSSGCIRLRPDDIEALFNSVPKGTRVQI 140 >ErfK_YbiS_YhnG_Q883T0_95-232_PF03734.4 Length = 138 Score = 99.1 bits (246), Expect = 6e-20 Identities = 20/142 (14%), Positives = 37/142 (26%), Gaps = 19/142 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEGF 67 G I I E ++ + ++ +YP+ G G + +P Sbjct: 1 GPREGIVINLAEYRMYYYPKGQN----VVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWT 56 Query: 68 YSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCY 116 + + G N G +IHG+ S GC+ Sbjct: 57 PPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFGIGMRTSHGCF 116 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M + + E+ Sbjct: 117 RMYNNNVLELADMAPVGTTVRI 138 >gi|69935211|ref|ZP_00630191.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 192 Score = 99.1 bits (246), Expect = 6e-20 Identities = 23/155 (14%), Positives = 40/155 (25%), Gaps = 24/155 (15%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG---GLGPKRREG 59 E+ + I + ++ L A Y + G Sbjct: 42 PTEVSIRNDFEVGSIVVVSKDFFLYHVVAPGRAV-----RYGVAVGKAELVWKGRATVGR 96 Query: 60 DFQSPEGFYSVQPNQLNPD--SRYYLAINIGFPNAYDRAHGYTG------KYLMIHGA-- 109 + P + + NP +R+ + G N Y + IHG Sbjct: 97 KTEWPSWTPTPAMIKRNPGQYARWADGMPGGPTNPLGARALYLYDAKGNDTSIRIHGTTE 156 Query: 110 ------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++F V Sbjct: 157 PNSIGRAVSNGCIRMRNEAVMDLFEQVPIGTPVYV 191 >gi|76165915|gb|EAO60044.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aurantiacus J-10-fl] Length = 374 Score = 99.1 bits (246), Expect = 6e-20 Identities = 15/134 (11%), Positives = 32/134 (23%), Gaps = 25/134 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + ++ L + ++I P+ G +P G + + Sbjct: 255 LIVVDLSDQWLYAVEGD-----RIIFDAPVSTGRDGFN---------TPVGTFFIYAKVR 300 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------SVGCYAMTDAQIDE 125 R A + Y + +HG S GC + Sbjct: 301 EQTMRGC-AGGECWVVPRVPHAMYIVGGVALHGTYWHNQFGTGVRRSHGCVNLPLKAAAW 359 Query: 126 IFAFVRDAFVGGQP 139 ++ + Sbjct: 360 LYEWAPVGTPVVVR 373 >ErfK_YbiS_YhnG_Q8Z7I2_99-240_PF03734.4 Length = 142 Score = 98.8 bits (245), Expect = 7e-20 Identities = 26/152 (17%), Positives = 39/152 (25%), Gaps = 37/152 (24%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I I E +L ++ + YPI G GD +P ++ Sbjct: 2 PREGIVINLAELRLYYYQPGKNT----VTVYPIGIGQLG-------GDTLTPTMVTTISD 50 Query: 73 NQLNPDSRYYLAI---------------NIGFPNAYDRAHGY---TGKYLMIHGACV--- 111 + NP I G N G ++HG Sbjct: 51 KRANPTWTPTTNIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNAGFG 110 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + D I+ +F V Sbjct: 111 IGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI 142 >gi|48863681|ref|ZP_00317574.1| COG3034: Uncharacterized protein conserved in bacteria [Microbulbifer degradans 2-40] Length = 124 Score = 98.4 bits (244), Expect = 1e-19 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 21/121 (17%) Query: 38 QLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH 97 ++K Y + + G K++EGD ++PEG YS+ + + S +Y A++I +PNA D Sbjct: 5 TVVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYKKED--SAFYRAMHISYPNAEDVRK 62 Query: 98 GYT-----GKYLMIHGA--------------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G ++M+HG + GC A+T++ +DE V+ Sbjct: 63 AKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCIALTNSDMDEFMDKVKVGTPIEI 122 Query: 139 P 139 Sbjct: 123 V 123 >ErfK_YbiS_YhnG_Q89MH4_65-200_PF03734.4 Length = 136 Score = 98.4 bits (244), Expect = 1e-19 Identities = 20/143 (13%), Positives = 37/143 (25%), Gaps = 23/143 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFY 68 P I + + R L + Y + + G R + P+ Sbjct: 1 EQPGTILVDTDARYLYFVLPEGKAI-----RYGVAVGEEAMAFSGVARVGRLAEWPDWVP 55 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGC 115 + Y + G N Y IHG +S GC Sbjct: 56 TADIQARL--GPYPARVAGGPANPLGARGIYLFVGNKDTLYRIHGTNQPEYIGQAISSGC 113 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 M + + +++ V+ + Sbjct: 114 IRMRNEDVIDLYDRVKLNSMVVV 136 >gi|69937362|ref|ZP_00632028.1| Twin-arginine translocation pathway signal [Paracoccus denitrificans PD1222] Length = 217 Score = 98.0 bits (243), Expect = 1e-19 Identities = 20/136 (14%), Positives = 37/136 (27%), Gaps = 11/136 (8%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I + R L W S P+ G P + + Sbjct: 84 ANGAILVDLTSRALHFWSEDQSVYRLFPTSVPVSADLTRTGRTEIIKKVVGPSWAPTPEM 143 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQI 123 + NP+ + G N + + +Y IHG S GC + + I Sbjct: 144 KKRNPEWP--DFVPPGPDNPLGTHALWLSWQYYRIHGTHDTRKIGRKSSNGCIGLYNEHI 201 Query: 124 DEIFAFVRDAFVGGQP 139 +++ + Sbjct: 202 QQLYELTKIGTQVLLI 217 >gi|23128911|ref|ZP_00110749.1| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 182 Score = 98.0 bits (243), Expect = 1e-19 Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 30/153 (19%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K + IR+ + R++ +++ + Q++KS+PI G Sbjct: 43 PKIPPSKNNTTHK-ISIRVKRGARQVYVYQ-----DKQVLKSFPIAIGKSGW-------- 88 Query: 61 FQSPEGFYSVQPNQLNP---DSRYYLAINIGFPNAYDRA----HGYTGKYLMIHGAC--- 110 ++P G Y V + NP + + I G N + Y +L HG Sbjct: 89 -ETPLGNYQVIYMKKNPIFKNFKTGNIIMPGANNPLGKRVIVFKIYKKSHLAFHGTNQDK 147 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + ++ V Sbjct: 148 LIGKAVSHGCIRMLNKDVIALYELVNIGTPINV 180 >gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Clostridium tetani E88] Length = 312 Score = 98.0 bits (243), Expect = 1e-19 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 30/142 (21%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I K++R L ++ + ++ K YP+ + +PEG +++ Sbjct: 173 YSMVINKDKRILTVYL-----DGKVYKKYPVAAGASP---------SYTPEGKFTIVSKL 218 Query: 75 LNPDSRYYLAI----NIGFPNAYDRAH----GYTGKYLMIHG--------ACVSVGCYAM 118 +NP N + G IHG VS+GC M Sbjct: 219 INPTWISTRTGQVISGGTPQNPLGKRWLGLSIDGGSMYGIHGSNNPWSIGTNVSLGCIRM 278 Query: 119 TDAQIDEIFAFVRDAFVGGQPS 140 + ++E+F F+ + Sbjct: 279 FNNDVEELFDFIPMNCPIWIGN 300 >gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] Length = 170 Score = 97.6 bits (242), Expect = 1e-19 Identities = 25/160 (15%), Positives = 45/160 (28%), Gaps = 29/160 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ G P I + +L E ++ K PI Sbjct: 16 PLWPIGPNPTVGDPFLI-VNIATNRLAYVD-----EGKIQKIVPIATGKP---------S 60 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGAC---- 110 ++P G +++ P R N G+ IHG Sbjct: 61 DKTPVGLFTITVKAEQPYYRKKNIAGGDPKNPLGTRWLGFDAKDTEGRTYGIHGTNRPES 120 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY 146 V+ GC + + +++E++A + VS Sbjct: 121 IGRYVTAGCIRLQNKEVEELYANIPLGTKILIVDYVVSFE 160 >gi|22959005|ref|ZP_00006665.1| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 183 Score = 97.6 bits (242), Expect = 1e-19 Identities = 23/134 (17%), Positives = 33/134 (24%), Gaps = 12/134 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I R L W S PI + G P + + Sbjct: 53 GAIVADTTSRALHFWSGDGRDYRIYPTSVPISEELTKRGYTEIVRKKVGPSWTPTPSQME 112 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGA--------CVSVGCYAMTDAQIDE 125 PD + + G N Y +IHG S GC + + +I E Sbjct: 113 RYPDWKP---VGPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGCIGLYNEKIAE 169 Query: 126 IFAFVRDAFVGGQP 139 +F Sbjct: 170 LFELCPIGTQVRVI 183 >gi|15156344|gb|AAK87086.1| AGR_C_2380p [Agrobacterium tumefaciens str. C58] Length = 425 Score = 97.6 bits (242), Expect = 2e-19 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 25/135 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ++ L L++ ++I + + G ++P G +S+ + Sbjct: 44 ILVSKSDQSLSLYEN-----GEIIATSKVSTGKAG---------HETPSGIFSILEKRKY 89 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFAFVR 131 +S Y A P + + T + +H S GC + +F R Sbjct: 90 HESNIYSAA----PMPFMQRL--TWSGIALHEGKVPNYPASHGCVRLPSKFAKSLFGDTR 143 Query: 132 DAFVGGQPSVQVSIY 146 VS+ Sbjct: 144 AGVHVIITDRPVSLR 158 >gi|28210382|ref|NP_781326.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88] Length = 232 Score = 97.6 bits (242), Expect = 2e-19 Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 48/168 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + + I+ YPI + SP G + + N Sbjct: 42 ILVDISEFKMYLIEKGSN---KPIRRYPIAGGKP---------ETPSPYGTWKITSKSAN 89 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P IHG S GC M + ++E++ Sbjct: 90 WGSGFGTRWMGLNVP----------WGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELY 139 Query: 128 AFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQLKPGYD 175 +V + + +++ ++ LKPG Sbjct: 140 KYVDVGTIVVIYGGPY-----------------NLSWNNFRTLKPGDK 170 >ErfK_YbiS_YhnG_Q8YN05_54-169_PF03734.4 Length = 116 Score = 97.6 bits (242), Expect = 2e-19 Identities = 22/129 (17%), Positives = 37/129 (28%), Gaps = 17/129 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 P I I ++L W+ K +L+ S+ I +P G + + Sbjct: 2 QPRRIEIDLSAQRLFAWEGK-----KLVYSFRISTGK---------RSTPTPIGQFKINS 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAF 129 R P A GY H G VS GC + +++ + Sbjct: 48 KYRTNRMRGPGYDIPNVPYAMYFHRGYAIHGAYWHNRFGTPVSHGCVNLPVKLARKLYNW 107 Query: 130 VRDAFVGGQ 138 + Sbjct: 108 TTPGTLVIV 116 >gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus] Length = 189 Score = 97.2 bits (241), Expect = 2e-19 Identities = 27/141 (19%), Positives = 37/141 (26%), Gaps = 13/141 (9%) Query: 8 QQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGF 67 G P + R L W A+ G S PI G + P Sbjct: 53 FDSLGKP-MLVADTFSRALHYWNAEGGDHRIFPTSVPISDDLTKRGYTEIVRKKEGPSWT 111 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAM 118 + PD + I G N Y + +IHG S GC + Sbjct: 112 PTPSQMARYPDWKP---IGPGPDNPLGTHAMYLSWPAYIIHGTHDTRKIGRRSSDGCIGL 168 Query: 119 TDAQIDEIFAFVRDAFVGGQP 139 + I E+F Sbjct: 169 YNEMIAELFQLCPVGTRVRVI 189 >gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 186 Score = 97.2 bits (241), Expect = 2e-19 Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 29/153 (18%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ + G P +I + K KL + ++ K P+ + Sbjct: 15 PLWPLGENPRAGDP-FIIVNKATNKLAYID-----DGKIQKVSPVATGK---------TN 59 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC---- 110 +PEG + V +P N G G IHG Sbjct: 60 ELTPEGTFDVVMKAKDPYYIAKDIPGGSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSS 119 Query: 111 ----VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +S GC M ++ +F + Sbjct: 120 IGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIV 152 >gi|67938515|ref|ZP_00531039.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides BS1] Length = 270 Score = 96.8 bits (240), Expect = 3e-19 Identities = 23/147 (15%), Positives = 40/147 (27%), Gaps = 25/147 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 PV E P + + ER++ ++ + +L+ P+ Sbjct: 139 PVDIEKASAYVPIPQVLDDSRGEREIRVYLDQQYFGAYEDGKLLFWGPVSSGKK------ 192 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 + G + V Q S I + NA IH G Sbjct: 193 ---SRPTWPGKFFVNYKQRYKRS-------IKYHNAPMPYSINYSGGYFIHEQSLPGYPA 242 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + ++F +V Sbjct: 243 SHGCIRLLMTDAKKLFNWVTIGDPVTV 269 >gi|68180217|ref|ZP_00553200.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1] Length = 206 Score = 96.8 bits (240), Expect = 3e-19 Identities = 25/142 (17%), Positives = 39/142 (27%), Gaps = 23/142 (16%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRREGDFQSPEGFYSVQPN 73 I + R L +A Y + GL G R + + P + Sbjct: 70 IHVDPTSRFLYHIEAGGTAM-----RYGVAVGRAGLYQPGNFRIQRVAEWPSWTPTANMI 124 Query: 74 QLNPDSR--YYLAINIGFPNAYDRAHGYTGKY-----LMIHGAC--------VSVGCYAM 118 + P+ Y + G N Y L IHG S GC + Sbjct: 125 RREPEIYAQYAGGVPGGPDNPLGARALYLYAGGRDTYLRIHGTPQPWSIGTSASSGCVRL 184 Query: 119 TDAQIDEIFAFVRDAFVGGQPS 140 + + ++ VR S Sbjct: 185 VNDHVIQLAQNVRSGNRAILHS 206 >gi|15025432|gb|AAK80371.1| Uncharacterized protein, ErfK family; contains peptidoglycan-binding domain [Clostridium acetobutylicum ATCC 824] Length = 235 Score = 96.8 bits (240), Expect = 3e-19 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 49/188 (26%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + +L + I + ++ +++ +L+K+Y I Sbjct: 32 PTNSKLSGYNSKKKILIVVDVVSNRMCVFQDD-----KLLKTYTIAGGKPST-------- 78 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVS 112 SP G +++ + + P IHG S Sbjct: 79 -PSPIGTWTIVGKDTWGEGFGGRWMGFNVP----------WGKYGIHGTIFPDSIGGNTS 127 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ--------VSIYPFRMTDANMQRHRNSPNY 164 GC M + + E++ SI P R S Y Sbjct: 128 HGCIRMRNDDVRELYKITPVGTKVIVQGGPYGNFGSYLRSIKPGD---------RGSDVY 178 Query: 165 DFWKQLKP 172 + K L+ Sbjct: 179 EVQKILRE 186 >ErfK_YbiS_YhnG_Q6LJB5_89-230_PF03734.4 Length = 142 Score = 96.4 bits (239), Expect = 4e-19 Identities = 23/144 (15%), Positives = 39/144 (27%), Gaps = 21/144 (14%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP----KRREGDFQSPEGFY 68 I I E +L + + ++ +PI G + ++P Sbjct: 2 KRKGIIINLAELRLYYFPED---DKSIVYIFPIGIGRVGRATPNMITKVSQKIENPTWTP 58 Query: 69 SVQPN---QLNPDSRYYLAINIGFPNAYDRAHG---YTGKYLMIHGAC--------VSVG 114 + + D + G N Y+ +IHG VS G Sbjct: 59 TANIRKEYREKKDIELPAVVPAGPENPLGEYAMRLAYSRGEYLIHGTNKDFGIGMRVSSG 118 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C M I+ +F V Sbjct: 119 CIRMNPWDIEWLFPQVPRGTSVQI 142 >gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099] Length = 505 Score = 96.4 bits (239), Expect = 4e-19 Identities = 26/152 (17%), Positives = 41/152 (26%), Gaps = 35/152 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K ++++ + +L+ +YP S D SP G ++V Sbjct: 359 PVARIVADKTKKEVYAYD----ASGKLVAAYPATIGSA---------DTPSPTGIHAVSR 405 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 L+P+ Y L I G IHG Sbjct: 406 IALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKT 465 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 S GC +T+ E+ V Sbjct: 466 ESHGCVRLTNWDARELAKLVSPGVTVEFVGGP 497 >ErfK_YbiS_YhnG_YQJB_24-150_PF03734.4 Length = 127 Score = 96.4 bits (239), Expect = 4e-19 Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 29/142 (20%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 PG P I + K +L + ++ Y + D +PEG +SV Sbjct: 1 PGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGK---------TDDLTPEGEFSV 45 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCY 116 NP R N G G+ IHG VS GC Sbjct: 46 TVKAENPYYRKKNIEGGSPDNPLGARWIGFDAKGTDGRIYGIHGTNREESVGKFVSNGCI 105 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M + ++ +F + Sbjct: 106 RMHNDEVVHLFQTIPVGTRVLI 127 >gi|23006804|ref|ZP_00048959.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 175 Score = 96.4 bits (239), Expect = 4e-19 Identities = 25/144 (17%), Positives = 41/144 (28%), Gaps = 23/144 (15%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL---GPKRRE 58 +E+ P +P I + ++R+L L + Y + G G R Sbjct: 35 RRQEVAYTGPEAPGTIVVDIDKRQLALVQEGGTAI-----RYGVGVGKAGFSWKGDARIA 89 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH----------- 107 P+ + LNP I N Y + H Sbjct: 90 RKGVWPDWSPTTTMVSLNPGIERSRKGGI--DNPLGARALYLYQGQPRHPVPHPRHQRAW 147 Query: 108 --GACVSVGCYAMTDAQIDEIFAF 129 G +S GC M + I ++ Sbjct: 148 SIGEQMSSGCVRMHNEDIVDLTER 171 >ErfK_YbiS_YhnG_Q8D2K2_98-234_PF03734.4 Length = 137 Score = 96.4 bits (239), Expect = 4e-19 Identities = 20/137 (14%), Positives = 35/137 (25%), Gaps = 19/137 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP-----KRREGDFQSPEGFYSVQ 71 I I E +L + ++ + P+ G + +P + Sbjct: 5 ILINIAEMRLFYFPKN----FEKVVVLPVGIGEIGKETPSKWKTYVKRKKYAPTWTPTKD 60 Query: 72 PNQLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 ++ L G N Y IHG V+ GC + + Sbjct: 61 MHKEYSSLGIKLLKIYPSGKNNPMGLYALYLEDLYAIHGTNTNFGIGLRVTHGCIRLRND 120 Query: 122 QIDEIFAFVRDAFVGGQ 138 I +F V Sbjct: 121 DIKYLFNNVPVGTEVYF 137 >gi|75908663|ref|YP_322959.1| ErfK/YbiS/YcfS/YnhG [Anabaena variabilis ATCC 29413] Length = 170 Score = 96.4 bits (239), Expect = 4e-19 Identities = 16/134 (11%), Positives = 33/134 (24%), Gaps = 27/134 (20%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +I+I ++L W+ + + + I + G + +Q Sbjct: 54 DQRWIQINLANQRLTAWEG-----GKPVYAIVISSGK---------RSTPTRIGSFKIQS 99 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQID 124 + R + + IHG VS GC + Sbjct: 100 KHKSTRMR-----GRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAK 154 Query: 125 EIFAFVRDAFVGGQ 138 +F + Sbjct: 155 WLFNWASLGTPVVI 168 >gi|71540790|ref|ZP_00662621.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei str. Goettingen] Length = 283 Score = 96.1 bits (238), Expect = 4e-19 Identities = 23/146 (15%), Positives = 38/146 (26%), Gaps = 40/146 (27%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 K Q + I + K R+L K+YP+ + Sbjct: 83 KREGQAWEQPRISIDVVK--RRLTY------TSGSFKKTYPVAVGKPQT---------PT 125 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY---TGKYLMIHGAC--------VS 112 P G +++ +NP + IHG VS Sbjct: 126 PLGNWTIVQKTVNPGG------------PFGARWMRLSVPWGGYGIHGTNRPSSIGKAVS 173 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC M +A + E++ Sbjct: 174 HGCVRMYNADVIELYDRTPLGTPVNI 199 >gi|69929707|ref|ZP_00626584.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 520 Score = 95.3 bits (236), Expect = 7e-19 Identities = 19/156 (12%), Positives = 41/156 (26%), Gaps = 22/156 (14%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ + A+ I P+ + ++P G +++ Sbjct: 57 AGEPIMAIVSLKSQQVTFYDAEGW-----ILRAPVSTG---------IKERETPAGVFAI 102 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + S Y + + G S GC M +++F Sbjct: 103 IEKDKDHHSTMYDDAWMPNMQRITWNGLALHGG-PLPGYAASHGCVRMPYGFAEKLFDKT 161 Query: 131 RDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDF 166 R I P + S Sbjct: 162 RIGMRV-------IISPNDAAPVDFSHPTLSLFAPN 190 >ErfK_YbiS_YhnG_Q7MFG2_93-232_PF03734.4 Length = 140 Score = 95.3 bits (236), Expect = 8e-19 Identities = 27/148 (18%), Positives = 44/148 (29%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ ++G + +P+ G +PE S++ + N Sbjct: 6 IVINLAELRLYYFEPELGK----VHVFPVGIGRVG---------RDTPEMVTSIREKRPN 52 Query: 77 PDSRYYLAI---------------NIGFPNAYD---RAHGYTGKYLMIHGAC-------- 110 P +I G N Y +IHG Sbjct: 53 PTWTPPASIRKEYREKGIELPKIIPAGPDNPLGEYALRLAYGSGDYLIHGTNKDFGIGLR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I+ +F+ V Sbjct: 113 VSAGCIRMEPKDIEWLFSQVDKGQRVKI 140 >ErfK_YbiS_YhnG_Q55604_71-200_PF03734.4 Length = 130 Score = 95.3 bits (236), Expect = 8e-19 Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 31/139 (22%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + ERK+ ++ +++ SYP+ G ++P+G + V N Sbjct: 6 IVLVLGERKVYAYQND-----KVLASYPVAVGKKGW---------ETPQGNFQVIQMVEN 51 Query: 77 PDSRYY---LAINIGFPNAYDRAHGYTGKY----LMIHGAC----------VSVGCYAMT 119 P + + HG S GC M Sbjct: 52 PVWENPWNGKKVAASLDGPIGIRWIGFWSDGKNTIGFHGTPKKHEHFLGTAASHGCVRMR 111 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + +F V++ Sbjct: 112 NQDVVALFNMVQNGTPVRV 130 >ErfK_YbiS_YhnG_Q818U5_25-151_PF03734.4 Length = 127 Score = 95.3 bits (236), Expect = 8e-19 Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 28/137 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +I + K KL + ++ K +P+ + +PEG + V Sbjct: 5 FIIVNKATNKLAYID-----DGKIQKVFPVATGK---------TNELTPEGTFDVVMKAK 50 Query: 76 NPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCYAMTDA 121 +P N G G IHG +S GC M Sbjct: 51 DPYYIAKDIPGGSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKN 110 Query: 122 QIDEIFAFVRDAFVGGQ 138 ++ +F + Sbjct: 111 DVEYLFDRIPIGTKVWI 127 >ErfK_YbiS_YhnG_Q60AJ8_93-237_PF03734.4 Length = 145 Score = 95.3 bits (236), Expect = 8e-19 Identities = 28/147 (19%), Positives = 44/147 (29%), Gaps = 36/147 (24%) Query: 17 IRIFKEERKLELWK-AKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 I + E +L + A G + + +YPI D++SP G V Sbjct: 6 IVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRM---------DWRSPLGLTKVVAKVK 56 Query: 76 NPDSRYYLAI---------------NIGFPNAYDRAHGYTG-KYLMIHGAC--------- 110 +P R +I G N + G +IHG Sbjct: 57 DPVWRPPASIKAEHAKNGEILPDVVPAGPNNPLGQFAMRLGVPGYLIHGTDQDKSYGIGM 116 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVG 136 V+ GC M + ++F V Sbjct: 117 RVTHGCIRMYPEDVAKLFPEVAVGTPV 143 >gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501] Length = 191 Score = 95.3 bits (236), Expect = 9e-19 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 32/153 (20%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P + E Q L + + +ER++ +++ Q+I +Y + G Sbjct: 55 PTAPENNQTLATH---VVLNLKERRVYVYQDD-----QVIANYRVAIGRPGW-------- 98 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAI---NIGFPNAYDRAHGYT----GKYLMIHGAC--- 110 ++P+G +SV +P + G + GKY+ HG Sbjct: 99 -ETPKGNFSVIQMVEDPQWKNPWNGRVSAPGPNSPLGERWIGFSREGGKYIGFHGTPGEH 157 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M + + E++ V++ Sbjct: 158 VMGQAVSHGCVRMRNRDVKELYELVQNGIPVIV 190 >gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synechocystis sp. PCC 6803] Length = 204 Score = 94.9 bits (235), Expect = 1e-18 Identities = 23/156 (14%), Positives = 43/156 (27%), Gaps = 31/156 (19%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P S +I + ERK+ ++ +++ SYP+ G Sbjct: 60 PTSTPSNPTSQALATHIVLVLGERKVYAYQND-----KVLASYPVAVGKKGW-------- 106 Query: 61 FQSPEGFYSVQPNQLNPDSRYY---LAINIGFPNAYDRAHGYTGKY----LMIHGAC--- 110 ++P+G + V NP + + HG Sbjct: 107 -ETPQGNFQVIQMVENPVWENPWNGKKVAASLDGPIGIRWIGFWSDGKNTIGFHGTPKKH 165 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC M + + +F V++ Sbjct: 166 EHFLGTAASHGCVRMRNQDVVALFNMVQNGTPVRVV 201 >ErfK_YbiS_YhnG_Q89CV1_74-185_PF03734.4 Length = 112 Score = 94.9 bits (235), Expect = 1e-18 Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 15/125 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ I I ++++ L+ LI + G +P G +SV Sbjct: 3 PLQIIISIADQRVSLFDN-----GALIARSSVSTGMEG---------HPTPLGVFSVISK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 Q S Y A + + + + + G S GC + ++ + Sbjct: 49 QRWHRSNIYSAAPMPYMQRITWSGIALHAGV-VPGHPASHGCIRLKSDFAVRLWHLTKRG 107 Query: 134 FVGGQ 138 Sbjct: 108 TRVII 112 >ErfK_YbiS_YhnG_Q5LWA4_42-184_PF03734.4 Length = 143 Score = 94.9 bits (235), Expect = 1e-18 Identities = 21/147 (14%), Positives = 35/147 (23%), Gaps = 26/147 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG---LGPKRREGDFQSPEGFYS 69 P + I L + Y G G + + P + Sbjct: 2 EPGRLLILPRSFYLYYVTEEREAI-----RYGCGVGKAGLEFTGTATIDVKKEWPTWRPT 56 Query: 70 VQPNQLNPDSRYYL-----AINIGFPNAYDRAHGYT-----GKYLMIHGA--------CV 111 + + +P + G N Y Y IHG Sbjct: 57 PEMIERDPRTYAKFVDNNYIQPGGPENPLGARALYLFQNGVDTYFRIHGTTQPQTIGHAA 116 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC M + + +++ V V Sbjct: 117 SNGCIRMLNEHVIDLYNRVPLGTVVTV 143 >ErfK_YbiS_YhnG_Q74GR4_169-307_PF03734.4 Length = 139 Score = 94.9 bits (235), Expect = 1e-18 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 26/146 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G+ I I K++R+L L ++I++Y + +GPK R+GD ++PEG Y ++ Sbjct: 1 GAVDKILIEKKDRRLSLLS-----MGEVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIE 55 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-----TGKYLMIHG--------------ACVS 112 N SRY+L++ I +PN D+ G +MIHG + Sbjct: 56 --GRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWT 113 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC A+TD +I+EI + V Sbjct: 114 QGCIAVTDEEIEEIAEAAPNGTVVEI 139 >ErfK_YbiS_YhnG_Q88KH0_95-232_PF03734.4 Length = 138 Score = 94.9 bits (235), Expect = 1e-18 Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 19/142 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEGF 67 G I I E ++ + ++ ++P+ G G R +P Sbjct: 1 GPREGIVINLAEYRMYYFPKGES----VVYTFPLGIGREGWGSPIANTRITAKTPNPTWT 56 Query: 68 YSVQPNQLNPDSRYYLA--INIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCY 116 + + + L + G N G +IHG+ S GC+ Sbjct: 57 PPASIRKEHAEDGDILPTVVPAGPDNPLGPFKFTLGVPGYLIHGSNKKFGIGMRTSHGCF 116 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M + + E+ V Sbjct: 117 RMFNNNVLELSKMVPVGTPVRI 138 >ErfK_YbiS_YhnG_Q9HZZ0_93-230_PF03734.4 Length = 138 Score = 94.5 bits (234), Expect = 1e-18 Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 19/142 (13%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG----PKRREGDFQSPEGF 67 G + I E +L + ++ +YP+ G G R + P + Sbjct: 1 GPREGVVINLAEYRLYYYPKGQN----VVHTYPLGIGREGWGSPIANTRITAKTKDPAWY 56 Query: 68 YSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTG-KYLMIHGAC--------VSVGCY 116 + + G N G +IHG+ S GC+ Sbjct: 57 PPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGYLIHGSNKKFGIGTRTSHGCF 116 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M +A + +F+ + Sbjct: 117 RMYNADVTHLFSMISVGTSVRI 138 >gi|17133907|dbj|BAB76469.1| all4770 [Nostoc sp. PCC 7120] Length = 170 Score = 94.5 bits (234), Expect = 1e-18 Identities = 16/132 (12%), Positives = 33/132 (25%), Gaps = 27/132 (20%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 +I+I ++L W+ + + + I + G + +Q Sbjct: 56 RWIQINLANQRLIAWEG-----GKPVYAIVISSGK---------RSTPTRIGSFKIQSKH 101 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEI 126 + R + + IHG VS GC + + Sbjct: 102 KSTRMR-----GRNYDVPNVPYAMFYSGNYGIHGAYWHRKFGTPVSNGCVNLAPNHAQWL 156 Query: 127 FAFVRDAFVGGQ 138 F + Sbjct: 157 FNWASLGTPVVI 168 >gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100] Length = 209 Score = 94.5 bits (234), Expect = 1e-18 Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 34/165 (20%) Query: 1 PVSKEL--KQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLG 53 P +KE K + +P+ ++ + K+ R L + + Q++ +Y + G Sbjct: 50 PRAKEFAEKARWDHAPISQKLDFVLVDKKRRMLHVMR-----HGQVLATYAVALGGNPQG 104 Query: 54 PKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------TGKYLMIH 107 K+ EGD ++PEG Y + S Y+L + I +PNA D A G ++IH Sbjct: 105 HKKNEGDQRTPEGRYFFDLKKAK--SEYHLGLRINYPNARDLAEAKKNGIKNPGDSILIH 162 Query: 108 GAC--------------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G + GC A+ + +I+EI+A + + Sbjct: 163 GLPNSWVKRKVIRHPRDWTKGCMAVRNYEIEEIYANMELGGMIEI 207 >ErfK_YbiS_YhnG_Q7N3U7_93-232_PF03734.4 Length = 140 Score = 94.5 bits (234), Expect = 1e-18 Identities = 24/152 (15%), Positives = 33/152 (21%), Gaps = 39/152 (25%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I I E +L + + YPI G +P SV Sbjct: 2 PRQGIVINLAELRLYYFPKGKNN----VIVYPIGIGQLG---------RNTPVMTTSVSQ 48 Query: 73 NQLNPDSRYYLAI---------------NIGFPNAYDRAHGY---TGKYLMIHGACV--- 111 +P I G N +IHG Sbjct: 49 LIKDPTWTPTKNIRKHYAEQGVILPAVVPAGPENPMGAFALRLAAGRGEYLIHGTNADFG 108 Query: 112 -----SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + I+ +F V Sbjct: 109 IGMRVSSGCIRLRPDDIETLFNAVPRGTRVQI 140 >ErfK_YbiS_YhnG_Q6MNZ7_47-183_PF03734.4 Length = 137 Score = 94.1 bits (233), Expect = 2e-18 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 14/138 (10%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 S I + KE+RKL +++ + I YP G G K + D ++PEG Y +Q Sbjct: 2 SRYVILVDKEQRKLSVFERNGEQIQK-ITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQE 59 Query: 73 NQLNP----DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------SVGCYAMTDA 121 P LA +PN +D+ TG + +H S GC + + Sbjct: 60 RLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRND 119 Query: 122 QIDEIFAFVRDA-FVGGQ 138 I ++ +++ Sbjct: 120 VIKKLADYIKLGETPILI 137 >gi|53688090|ref|ZP_00109223.2| COG1376: Uncharacterized protein conserved in bacteria [Nostoc punctiforme PCC 73102] Length = 171 Score = 94.1 bits (233), Expect = 2e-18 Identities = 16/134 (11%), Positives = 33/134 (24%), Gaps = 27/134 (20%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +I+I +++L W+ +++ I + G + VQ Sbjct: 55 DRRWIQIDLSKQRLIAWEGD-----RVVYGSAISSGKKAT---------PTLVGTFKVQS 100 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQID 124 + + + IHG VS GC + Sbjct: 101 KFKTTRMQ-----GENYNVPNVPYAMFYEGNYAIHGAYWHKRFGTPVSHGCVNIAPKHAK 155 Query: 125 EIFAFVRDAFVGGQ 138 +F + Sbjct: 156 WLFQWASVGTPIVI 169 >ErfK_YbiS_YhnG_Q5N3Q0_79-206_PF03734.4 Length = 128 Score = 93.8 bits (232), Expect = 2e-18 Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 29/138 (21%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + +R++ +++ + I SYP+ G ++P G + V + Sbjct: 5 KLVLSLRQRRVTVYR-----DRLAIASYPVGIGKPGW---------ETPRGTFRVMSKIV 50 Query: 76 NPDSRYY---LAINIGFPNAYDRAHGYTGKY----LMIHGA--------CVSVGCYAMTD 120 NP ++ + G N + HG VS GC M + Sbjct: 51 NPTWQHPWNGSLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKN 110 Query: 121 AQIDEIFAFVRDAFVGGQ 138 I +F V + + Sbjct: 111 RDIRALFELVEEGAIVSV 128 >gi|50085556|ref|YP_047066.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 462 Score = 93.8 bits (232), Expect = 3e-18 Identities = 34/156 (21%), Positives = 48/156 (30%), Gaps = 34/156 (21%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 ++ LP I K R+L L+ Q+I S+P S D SP Sbjct: 320 VRNDLPEDIHLIIAHKGARQLYLF----NSRNQMIASFPATIGSS---------DTPSPT 366 Query: 66 GFYSVQPNQLNPDSRY------------YLAINIGFPNAYDRAH-GYTGKYLMIHGAC-- 110 G Y V NP Y L++ G G + K IHG Sbjct: 367 GTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNP 426 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +++ VR Sbjct: 427 SAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE 462 >gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thiobacillus denitrificans ATCC 25259] Length = 164 Score = 93.8 bits (232), Expect = 3e-18 Identities = 29/164 (17%), Positives = 48/164 (29%), Gaps = 44/164 (26%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 I + ++L LW+ G+ LI+ YP+ + G G + G + +P G + V Sbjct: 4 RVIDVDIARQRLYLWERFPDGDM-LIREYPVSTAANGAG--EQSGSYCTPRGRHRVAQKI 60 Query: 74 -----------QLNPDSRYYLAINIGFPNA-YDRAHGYT-------------------GK 102 + + N D + Sbjct: 61 GAGAPLYAAFKARQATGEIW-TPGLDAQNPGRDWILTRILWLEGLEPGRNQGGTVDSHDR 119 Query: 103 YLMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 Y+ IHG S GC M +A + E+F V Sbjct: 120 YIYIHGTNEEHRIGTPASHGCVRMKNADVAELFELVEVGTEVRI 163 >gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] Length = 325 Score = 93.4 bits (231), Expect = 3e-18 Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 31/201 (15%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + K ++ L ++ G Q + I +G K+ EGD ++P GFY Sbjct: 61 YDDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQKAIITGL--MGDKQVEGDLKTPVGFYE 118 Query: 70 VQPNQLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAM 118 + NP YY A +PN D+ G TG + IHG + + GC A+ Sbjct: 119 LGRKF-NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIAL 177 Query: 119 TDAQIDEI---------FAFVRDAFVGGQPSVQVSIYPFRMTD--ANMQRHRNSPNYDFW 167 + ++E FA + ++ + + +F+ Sbjct: 178 FNENLEEFAKVVQDKKVFAMTEEKEKVRAKKEDIAALLADLFAWKLAWTDSDINTYLNFY 237 Query: 168 --KQLKP----GYDYFEQTRK 182 KQ K ++ F +K Sbjct: 238 DEKQFKRFDKMKFEQFASMKK 258 >gi|69297918|ref|ZP_00620214.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TM1040] Length = 205 Score = 93.4 bits (231), Expect = 3e-18 Identities = 17/130 (13%), Positives = 37/130 (28%), Gaps = 10/130 (7%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + E R L W S P+ + G + ++P + + + Sbjct: 75 LLADIESRALHYWGGDGETYLLFPSSVPMSEELTRRGYSKIVRKRENPSWTPTANMRERD 134 Query: 77 PDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQIDEIF 127 P + N Y ++HG S GC + + +++++ Sbjct: 135 PSLPQRIEGGE-PNNPLGTRALYLDWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHVEKLY 193 Query: 128 AFVRDAFVGG 137 V+ Sbjct: 194 PLVKVGTQVR 203 >ErfK_YbiS_YhnG_YAT5_56-188_PF03734.4 Length = 133 Score = 93.4 bits (231), Expect = 3e-18 Identities = 25/132 (18%), Positives = 35/132 (26%), Gaps = 12/132 (9%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + R L W A+ G S PI G + P + Sbjct: 5 MLVADTFSRALHYWNAEGGDHRIFPTSVPISDDLTKRGYTEIVRKKEGPSWTPTPSQMAR 64 Query: 76 NPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQIDEI 126 PD + I G N Y + +IHG S GC + + I E+ Sbjct: 65 YPDWKP---IGPGPDNPLGTHAMYLSWPAYIIHGTHDTRKIGRRSSDGCIGLYNEMIAEL 121 Query: 127 FAFVRDAFVGGQ 138 F Sbjct: 122 FQLCPVGTRVRV 133 >gi|69299488|ref|ZP_00621475.1| Twin-arginine translocation pathway signal [Silicibacter sp. TM1040] Length = 205 Score = 93.4 bits (231), Expect = 3e-18 Identities = 26/135 (19%), Positives = 39/135 (28%), Gaps = 11/135 (8%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 I + + R L W S P+ G R + P + Sbjct: 73 RGAILVDIDSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKVEGPSWAPTPNMR 132 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQID 124 + NP+ Y I G N Y + +Y IHG S GC + + I Sbjct: 133 KRNPEWPAY--IPPGPDNPLGSHALYLSWQYYRIHGTHDTRKIGRKSSNGCIGLYNEHIA 190 Query: 125 EIFAFVRDAFVGGQP 139 E++ R Sbjct: 191 ELYKLTRSGTQVLLI 205 >gi|71676969|ref|ZP_00674708.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 206 Score = 93.0 bits (230), Expect = 3e-18 Identities = 18/134 (13%), Positives = 33/134 (24%), Gaps = 27/134 (20%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 +I I ++L W+ Y +I + + G + +Q Sbjct: 92 RWISIDLSTQRLIAWEGN-EAVYAVI----VSTGKAST---------PTRLGTFQIQTKY 137 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEI 126 G+ Y + IHG VS GC + + Sbjct: 138 PTTRMT-----GPGYDVPDVPYTMYYDAGMAIHGAYWHNMFGTPVSHGCTNVAVNHAKWL 192 Query: 127 FAFVRDAFVGGQPS 140 F + + Sbjct: 193 FDWASVGTPVIVHN 206 >gi|56676740|gb|AAV93406.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter pomeroyi DSS-3] Length = 208 Score = 93.0 bits (230), Expect = 4e-18 Identities = 25/134 (18%), Positives = 36/134 (26%), Gaps = 11/134 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I + R L W S P+ G P + + Sbjct: 77 GAILVDTVSRALHYWSEDQSVYRLFPSSVPLTDELTRRGRTSVIRKVVGPSWAPTPSMKK 136 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQIDE 125 NP+ Y I G N Y + KY IHG S GC + + I + Sbjct: 137 RNPEWPDY--IPPGPDNPLGTHALYLSWKYYRIHGTHDTRKIGRRSSNGCIGLYNEHISQ 194 Query: 126 IFAFVRDAFVGGQP 139 +F + Sbjct: 195 LFDLTKVGTQVLLI 208 >gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 415 Score = 93.0 bits (230), Expect = 4e-18 Identities = 33/156 (21%), Positives = 48/156 (30%), Gaps = 34/156 (21%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 ++ LP I K ++L L+ Q+I S+P S D SP Sbjct: 273 VRNDLPEDIHLIIAHKGAKQLYLF----NSRNQMIASFPATIGS---------TDTPSPT 319 Query: 66 GFYSVQPNQLNPDSRY------------YLAINIGFPNAYDRAH-GYTGKYLMIHGAC-- 110 G Y V NP Y L++ G G + K IHG Sbjct: 320 GTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNP 379 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +++ VR Sbjct: 380 SLISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE 415 >gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobacillus kaustophilus HTA426] Length = 168 Score = 92.6 bits (229), Expect = 5e-18 Identities = 24/142 (16%), Positives = 41/142 (28%), Gaps = 28/142 (19%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 + + + K KL L + + ++ YP+ +PEG ++V Sbjct: 23 AEAKPLVIVNKAINKLALVR-----DGRIEAVYPVATG---------VNADLTPEGMFTV 68 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCY 116 P R N G G+ IHG VS GC Sbjct: 69 TVKAKYPYYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQYVSQGCV 128 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M + ++ ++ V Sbjct: 129 RMHNRDVEHLYERVPIGANVLI 150 >gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacillus clausii KSM-K16] Length = 165 Score = 92.6 bits (229), Expect = 6e-18 Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + + +L L ++K YPI Q+P G + + Sbjct: 56 PYEIHVSLSQHQLTLLHN-----GSVVKIYPIAVGKMLT---------QTPTGNFVIVNK 101 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 NP + + + IHG VS GC M + ++E Sbjct: 102 APNPGGPFG-----------TMWMSLSKLHYGIHGTNDPSSIGKSVSHGCIRMHNKDVEE 150 Query: 126 IFAFVRDAFVGGQ 138 + A V Sbjct: 151 LAATVPIGTRVRI 163 >gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesorhizobium loti MAFF303099] Length = 200 Score = 92.2 bits (228), Expect = 6e-18 Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 17/153 (11%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRR 57 V + P + I + K R + + + + +P S G Sbjct: 45 VPDIDRGDSPATIAGIEVDKGARLVRVLDPS----GKWLAVFPASIGSAEKPAPGGEAEV 100 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV----- 111 + ++P Y + ++ I G N + + IHG Sbjct: 101 KRVVRNPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVGSVWIDLSIESYGIHGTPEPGKIG 160 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC +T+ +++ + V+ Sbjct: 161 TTFSHGCIRLTNWDAEDLASMVQKGTKVSFKDE 193 >ErfK_YbiS_YhnG_Q895S8_170-298_PF03734.4 Length = 129 Score = 92.2 bits (228), Expect = 7e-18 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 30/140 (21%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + I K++R L ++ + ++ K YP+ + +PEG +++ Sbjct: 4 YSMVINKDKRILTVYL-----DGKVYKKYPVAAGASP---------SYTPEGKFTIVSKL 49 Query: 75 LNPDSRYYLAI----NIGFPNAYDRAH----GYTGKYLMIHG--------ACVSVGCYAM 118 +NP N + G IHG VS+GC M Sbjct: 50 INPTWISTRTGQVISGGTPQNPLGKRWLGLSIDGGSMYGIHGSNNPWSIGTNVSLGCIRM 109 Query: 119 TDAQIDEIFAFVRDAFVGGQ 138 + ++E+F F+ Sbjct: 110 FNNDVEELFDFIPMNCPIWI 129 >gi|69937273|ref|ZP_00631965.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 164 Score = 92.2 bits (228), Expect = 7e-18 Identities = 21/134 (15%), Positives = 31/134 (23%), Gaps = 11/134 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I + R L W PI G + P + + Sbjct: 33 GAIVADTKSRALHFWSGDEAIYRVYPTLVPISDALTKRGHTEIVRKKEGPGWTSTASQME 92 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQIDE 125 PD + N Y +IHG S C + + +I E Sbjct: 93 RFPDWK--PVAGGDPANPLGSHAMYLPWPASLIHGTHDTRKIGRLPSDSCIGLCNEKIAE 150 Query: 126 IFAFVRDAFVGGQP 139 +FA Sbjct: 151 LFALCPVGTQVRII 164 >ErfK_YbiS_YhnG_Q5WC42_54-163_PF03734.4 Length = 110 Score = 91.8 bits (227), Expect = 8e-18 Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + + +L L ++K YPI Q+P G + + Sbjct: 3 PYEIHVSLSQHQLTLLHN-----GSVVKIYPIAVGKMLT---------QTPTGNFVIVNK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 NP + + + IHG VS GC M + ++E Sbjct: 49 APNPGGPFG-----------TMWMSLSKLHYGIHGTNDPSSIGKSVSHGCIRMHNKDVEE 97 Query: 126 IFAFVRDAFVGGQ 138 + A V Sbjct: 98 LAATVPIGTRVRI 110 >gi|46191772|ref|ZP_00008016.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 176 Score = 91.8 bits (227), Expect = 8e-18 Identities = 20/134 (14%), Positives = 34/134 (25%), Gaps = 10/134 (7%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + R L W S P+ G +P + + Sbjct: 44 GAVLVDITSRALHFWSEDGQTYLLFPTSVPLSDDLTRRGRTEVVQKVVAPPWRPTPAMKE 103 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQIDE 125 NP+ + N Y + Y IHG S GC + + I + Sbjct: 104 RNPEWP-DMVPGGAPDNPLGTHALYLSWTYYRIHGTHDTRKIGRKSSNGCIGLYNEHIQQ 162 Query: 126 IFAFVRDAFVGGQP 139 +F + Sbjct: 163 LFPLAKVGTQVLLI 176 >ErfK_YbiS_YhnG_Q9KNA7_90-229_PF03734.4 Length = 140 Score = 91.8 bits (227), Expect = 9e-18 Identities = 24/148 (16%), Positives = 38/148 (25%), Gaps = 39/148 (26%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I E +L ++ G + +P+ G +P S+ + Sbjct: 6 IVINLAELRLYYFRPNEGK----VHIFPVGIGRIG---------RDTPVMQTSISSKRKY 52 Query: 77 PDSRYYLAI---------------NIGFPNAYDRAHG---YTGKYLMIHGAC-------- 110 P +I G N Y +IHG Sbjct: 53 PTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIHGTNKDFGVGMR 112 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC M I+ ++ V Sbjct: 113 VSAGCIRMDPKDIEWLYQQVERGEKVRI 140 >gi|62317131|ref|YP_222984.1| hypothetical protein BruAb2_0179 [Brucella abortus biovar 1 str. 9-941] Length = 227 Score = 91.4 bits (226), Expect = 1e-17 Identities = 21/126 (16%), Positives = 34/126 (26%), Gaps = 15/126 (11%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK---RRE 58 + + + P I I R L L +A + Y + G K R Sbjct: 98 LPQIVSYSGKEKPGTIVIDTASRFLYLVQADGKA-----RRYGVGVGKQGFSWKGTQRIS 152 Query: 59 GDFQSPEGFYSVQP--NQLNPDSRYYLAINIGFPNAYDRAHGYTGKY-LMIHGA--CVSV 113 + P + + ++ G N Y G IHG ++ Sbjct: 153 RKAEWPTWTPPSEMIARERKKGRFLPARMDGGINNPLGARALYLGSTLYRIHGTNQPWTI 212 Query: 114 G--CYA 117 G C Sbjct: 213 GRPCPR 218 >gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodopseudomonas palustris CGA009] Length = 519 Score = 91.4 bits (226), Expect = 1e-17 Identities = 19/141 (13%), Positives = 43/141 (30%), Gaps = 17/141 (12%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ L+ ++ I P+ + G ++P G ++V Sbjct: 54 AGEPIMAIVSIKGQRVTLYDSEGW-----IYRAPVSTGTTG---------RETPAGVFAV 99 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFV 130 + S Y + + G S GC M +++F Sbjct: 100 VEKDKDHRSTMYDDAWMPNMQRITWNGVALHGG-PLPGYPASHGCVRMPYEFAEKLFDKT 158 Query: 131 RDAFVGGQPSVQVSIYPFRMT 151 R + P ++ Sbjct: 159 RIGMRVIV--SPEDVEPADIS 177 >ErfK_YbiS_YhnG_Q5LWL8_74-207_PF03734.4 Length = 134 Score = 91.4 bits (226), Expect = 1e-17 Identities = 25/131 (19%), Positives = 36/131 (27%), Gaps = 11/131 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I + R L W S P+ G P + + Sbjct: 4 GAILVDTVSRALHYWSEDQSVYRLFPSSVPLTDELTRRGRTSVIRKVVGPSWAPTPSMKK 63 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQIDE 125 NP+ Y I G N Y + KY IHG S GC + + I + Sbjct: 64 RNPEWPDY--IPPGPDNPLGTHALYLSWKYYRIHGTHDTRKIGRRSSNGCIGLYNEHISQ 121 Query: 126 IFAFVRDAFVG 136 +F + Sbjct: 122 LFDLTKVGTQV 132 >gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbiobacterium thermophilum IAM 14863] Length = 354 Score = 91.4 bits (226), Expect = 1e-17 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 28/151 (18%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ----SPEG 66 P P I + K L ++ + +L+++ + GP ++ +P G Sbjct: 206 PPEPTVIVVDKGLNVLWYYE-----DGELVQTARVSTGRHVAGPAPSPDNWTENLLTPTG 260 Query: 67 FYSVQPNQLNPDSRYYLAI--NIGFPNAYDRAH-------GYTGKYLMIHGACV------ 111 ++V P YY + N G G IHG Sbjct: 261 RFTVTLMV--PGMPYYKEGIDALDPANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALGR 318 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S G M++ ++++++ V + Sbjct: 319 WNSEGSIVMSNGEVEQLYERVELGTPVIITN 349 >gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 324 Score = 91.4 bits (226), Expect = 1e-17 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 17/141 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + I K + L L+ + ++ +P+ S +G + G + P+ Y Sbjct: 188 KPAKLVIDKSDSTLRLFD----AQGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKFHY 243 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + + G N R + + +HG S GC +T Sbjct: 244 NPKLFWDAKPGEGKATLPPGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 303 Query: 120 DAQIDEIFAFVRDAFVGGQPS 140 + + + + V + Sbjct: 304 NWDVVNLASVVDASVPVVMQE 324 >gi|4982262|gb|AAD36753.1| conserved hypothetical protein [Thermotoga maritima MSB8] Length = 395 Score = 91.4 bits (226), Expect = 1e-17 Identities = 30/155 (19%), Positives = 47/155 (30%), Gaps = 30/155 (19%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + +PV I + KL L+ + L+K YP+ +P G Sbjct: 256 RVYFRENPVTIVVNLFSSKLALY-----YDGVLLKVYPVALGR----------SDATPPG 300 Query: 67 FYSVQPNQLNPDSRYYLAI--NIGFPNAYD-RAHGYTGKYLMIHGA--CV------SVGC 115 Y V +++P ++ N R + IHG S GC Sbjct: 301 RYWVLRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYAIHGTSKPWEIGKRISHGC 360 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ----PSVQVSIY 146 M + ++EI AF IY Sbjct: 361 IRMFNRDVEEIDAFAGVGTEVVVVKEDKEFPERIY 395 >gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 153 Score = 91.4 bits (226), Expect = 1e-17 Identities = 19/137 (13%), Positives = 39/137 (28%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + + IKS+ + +P+G + + N Sbjct: 31 LIVNTQLNKMDYYQ-----DGKFIKSFAVATGKAAT---------PTPKGTFQIVNKIKN 76 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGACV--------SVGCYAMTDAQ 122 N G G IHG ++GC M + Sbjct: 77 RPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKATTLGCIRMYNND 136 Query: 123 IDEIFAFVRDAFVGGQP 139 I +F V+ Sbjct: 137 IHWLFERVQQQATVTVK 153 >gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinorhizobium meliloti 1021] Length = 327 Score = 91.4 bits (226), Expect = 1e-17 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 17/149 (11%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREGD 60 + G I + K ++ + + + +YP S G G + +G Sbjct: 183 KPGAAKEGEVKRIEVRKRAGQVLAF----AEDGSPLAAYPASIGSEGSPSPTGTHKVKGV 238 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV-------- 111 + P Y N D+ L + G N T IHG Sbjct: 239 ARMPPYEYDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDLTEPTYGIHGTPEPSLIDKAQ 298 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +E+ A V+ V Sbjct: 299 SHGCVRLTNWDAEELAAMVKPGVVAEFID 327 >gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Bradyrhizobium japonicum USDA 110] Length = 353 Score = 90.7 bits (224), Expect = 2e-17 Identities = 28/152 (18%), Positives = 39/152 (25%), Gaps = 35/152 (23%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P + + K + ++L+ LI YP S D SP G V Sbjct: 212 PAKADRVEVDKVRQTVKLFDKSN----ALIGFYPATVGSE---------DKPSPSGTLKV 258 Query: 71 QPNQLNPDSRYYLAIN-------------IGFPNAYDRAHGYTGK-YLMIHGACV----- 111 NP RY A + G N IHG Sbjct: 259 TEVSKNPLYRYNPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAEGYGIHGTPSPDKIS 318 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ + + V Sbjct: 319 KAESHGCVRLTNWDAERVAGSVAKGTPVAFVE 350 >gi|16331947|ref|NP_442675.1| hypothetical protein sll0670 [Synechocystis sp. PCC 6803] Length = 169 Score = 90.7 bits (224), Expect = 2e-17 Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 27/132 (20%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 +I + ++L W+ + + + I G + G +++Q + Sbjct: 55 RWIEVNLSTQRLIAWEGN-----KPVYAIIISTGKKGT---------PTIPGIFTIQSKR 100 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEI 126 R + Y IHG VS GC + + Sbjct: 101 SIDRMR-----GADYDIDDVPYAQYYSGGYAIHGAYWHNKFGTPVSHGCINLAVDHAKWL 155 Query: 127 FAFVRDAFVGGQ 138 F + + Sbjct: 156 FNWSEISTPLVI 167 >gi|67918178|ref|ZP_00511779.1| ErfK/YbiS/YcfS/YnhG [Chlorobium limicola DSM 245] Length = 270 Score = 90.7 bits (224), Expect = 2e-17 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 25/147 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 P+ + + P + + ER++ ++ + +L+ P+ Sbjct: 136 PIDVQKASRYVPVPELLANSRGEREIRIFLDRQYFGAYEKGRLLFWGPVSSGRK------ 189 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 +++P G + V Q + ++I + NA +H G Sbjct: 190 ---TYRTPPGKFFVNYKQRH-------KLSIKYDNAPMPFSINFYGGYFMHQQSLPGYPA 239 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + +++F +V+ Sbjct: 240 SHGCVRLLMTDAEKLFNWVKPRDPVTV 266 >ErfK_YbiS_YhnG_Q9KCV4_26-152_PF03734.4 Length = 127 Score = 90.3 bits (223), Expect = 2e-17 Identities = 19/137 (13%), Positives = 40/137 (29%), Gaps = 28/137 (20%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 ++ + +L E ++ K PI ++P G +++ Sbjct: 5 FLIVNIATNRLAYVD-----EGKIQKIVPIATGKP---------SDKTPVGLFTITVKAE 50 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYT------GKYLMIHGAC--------VSVGCYAMTDA 121 P R N G+ IHG V+ GC + + Sbjct: 51 QPYYRKKNIAGGDPKNPLGTRWLGFDAKDTEGRTYGIHGTNRPESIGRYVTAGCIRLQNK 110 Query: 122 QIDEIFAFVRDAFVGGQ 138 +++E++A + Sbjct: 111 EVEELYANIPLGTKILI 127 >gi|71363427|ref|ZP_00654071.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 171 Score = 90.3 bits (223), Expect = 2e-17 Identities = 26/168 (15%), Positives = 47/168 (27%), Gaps = 50/168 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I I ++ L +++ + ++I YPI G+G ++ G +P G + + Sbjct: 11 IVISIAQQTLTVYRRQ-----KVIAEYPISTAKNGIGSQQDSGC--TPLGQHIIAEKIGG 63 Query: 74 ---------QLNPDSRYYLAINIGFPNAYDRAHGY-----------------------TG 101 Y A D Sbjct: 64 NAPSHTVFIGRIATGEIYNAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTYH 123 Query: 102 KYLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 +Y+ IHG S GC M + I E+F + + + Sbjct: 124 RYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEGTAVNIIAQ 171 >gi|58580802|ref|YP_199818.1| hypothetical protein XOO1179 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 365 Score = 90.3 bits (223), Expect = 3e-17 Identities = 19/141 (13%), Positives = 44/141 (31%), Gaps = 17/141 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ + ++ +P+ S + + G ++P Y Sbjct: 229 KPAKLVVDKSDSTLRLFD----ADGKVYAQFPVSSGSKHDPLPIRRWKILGVARNPVFKY 284 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + G N R + + +HG S GC +T Sbjct: 285 NPTLFWDAKKGEQKATLPPGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 344 Query: 120 DAQIDEIFAFVRDAFVGGQPS 140 + + + + V + + Sbjct: 345 NWDVVNLASVVGPSMLVVMQE 365 >ErfK_YbiS_YhnG_Q97GF1_43-153_PF03734.4 Length = 111 Score = 90.3 bits (223), Expect = 3e-17 Identities = 17/134 (12%), Positives = 36/134 (26%), Gaps = 32/134 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I + ++ +++ +L+K+Y I SP G +++ Sbjct: 2 KKILIVVDVVSNRMCVFQDD-----KLLKTYTIAGGKPST---------PSPIGTWTIVG 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 + + P IHG S GC M + + Sbjct: 48 KDTWGEGFGGRWMGFNVP----------WGKYGIHGTIFPDSIGGNTSHGCIRMRNDDVR 97 Query: 125 EIFAFVRDAFVGGQ 138 E++ Sbjct: 98 ELYKITPVGTKVIV 111 >gi|46192269|ref|ZP_00007047.2| COG1376: Uncharacterized protein conserved in bacteria [Rhodobacter sphaeroides 2.4.1] Length = 180 Score = 90.3 bits (223), Expect = 3e-17 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 11/134 (8%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + +R + W + + P + LG R + P + Sbjct: 49 GAVLADLRQRVVLFWSEDGTVHRRYPAAMPDTRAFPRLGGTRIIRKVEGPTWRPTPAMRA 108 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYT-GKYLMIHGACV--------SVGCYAMTDAQIDE 125 +P+ + ++ G N + + ++ IHG + GC +++A I E Sbjct: 109 RDPELPW--SLPPGPGNPFGTHALHLEWQHYRIHGTHDPSTIGGVTAHGCIGLSNAHIAE 166 Query: 126 IFAFVRDAFVGGQP 139 +FA Sbjct: 167 LFAHTTVGTQVRLV 180 >ErfK_YbiS_YhnG_Q8UFV4_31-142_PF03734.4 Length = 112 Score = 89.9 bits (222), Expect = 4e-17 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 25/127 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + K ++ L L++ ++I + + G ++P G +S+ + Sbjct: 6 ILVSKSDQSLSLYEN-----GEIIATSKVSTGKAG---------HETPSGIFSILEKRKY 51 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACVSVGCYAMTDAQIDEIFAFVR 131 +S Y A P + + T + +H S GC + +F R Sbjct: 52 HESNIYSAA----PMPFMQRL--TWSGIALHEGKVPNYPASHGCVRLPSKFAKSLFGDTR 105 Query: 132 DAFVGGQ 138 Sbjct: 106 AGVHVII 112 >gi|76164940|gb|EAO59080.1| ErfK/YbiS/YcfS/YnhG [Chloroflexus aurantiacus J-10-fl] Length = 372 Score = 89.9 bits (222), Expect = 4e-17 Identities = 15/134 (11%), Positives = 33/134 (24%), Gaps = 25/134 (18%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I + + L ++ + L+ S P+ G +P G +++ Sbjct: 253 RRIEVDLARQYLFAYEDNL-----LVFSAPVATGRDGFN---------TPRGDFTIYYRL 298 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------SVGCYAMTDAQID 124 L + Y + +HG S GC + Sbjct: 299 PQQTMSGCLGGECWY-VPNVPWVQYVVGGVALHGTYWHNAHGSGVRMSHGCINLRIDDAQ 357 Query: 125 EIFAFVRDAFVGGQ 138 ++ + Sbjct: 358 WLYEWADLGVPVKI 371 >gi|6968344|emb|CAB73164.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 325 Score = 89.9 bits (222), Expect = 4e-17 Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 31/201 (15%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + + K ++ L ++ + G + + I +G K+ EGD ++P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGL--MGDKKIEGDLKTPVGFYE 118 Query: 70 VQPNQLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAM 118 + NP YY A +PN D+ G TG + IHG + + GC A+ Sbjct: 119 LGRKF-NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDAN-----------MQRHRNSPNYDFW 167 + +++ V+D V + I + A+ + F+ Sbjct: 178 FNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNAYLSFY 237 Query: 168 --KQLKP----GYDYFEQTRK 182 ++ K ++ F +K Sbjct: 238 DEQEFKRFDKMKFEQFASMKK 258 >gi|61101139|ref|ZP_00376596.1| hypothetical protein ELI1837 [Erythrobacter litoralis HTCC2594] Length = 315 Score = 89.5 bits (221), Expect = 4e-17 Identities = 22/160 (13%), Positives = 49/160 (30%), Gaps = 38/160 (23%) Query: 3 SKELKQQLPGSP------------VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG 50 + + P P V I I + + +++ + +L +S P+ Sbjct: 42 PVPVAEWTPEPPPEVTVDDTLRDGVVIVISNASQHMHVFQ-----DGRLWRSSPVSTGKR 96 Query: 51 GLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH--- 107 G ++P G +++ + S Y P + + T + IH Sbjct: 97 GK---------ETPTGVFAILQKRRFHRSNLYS----NAPMPFMQRL--TWDGIAIHAGR 141 Query: 108 --GACVSVGCYAMTDAQIDEIFAFVR-DAFVGGQPSVQVS 144 G S GC + +++F + + + Sbjct: 142 LPGYPASHGCIRLPSNFANDLFRLTGFTSTGVIVTNDPLE 181 >gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacillus clausii KSM-K16] Length = 171 Score = 89.5 bits (221), Expect = 4e-17 Identities = 23/156 (14%), Positives = 42/156 (26%), Gaps = 34/156 (21%) Query: 6 LKQQLPGSPVY------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREG 59 Q+PG + + + L L +A E P+ G Sbjct: 15 QPLQMPGDTDWEVEKASVIVNVRTNTLALIEANHIAEIH-----PVATGKKG-------- 61 Query: 60 DFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--- 110 ++P G ++V P R N G G+ +HG Sbjct: 62 -DETPLGQFTVLVKVEQPYYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPG 120 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC + + I+ ++ + + Sbjct: 121 SIGYSASAGCIRLANPTIERLYQKIDIGSKIFIVNE 156 >gi|71364613|ref|ZP_00655198.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 391 Score = 89.5 bits (221), Expect = 5e-17 Identities = 24/142 (16%), Positives = 38/142 (26%), Gaps = 28/142 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + K L + K L+ SYP S SP G ++V Sbjct: 263 PVSRVVADKATETLYAYDDK----GILVASYPTTVGSTAT---------PSPTGTHTVAV 309 Query: 73 NQLNPDSRYYLA------INIGFPNAYDRAH-GYTGKYLMIHGAC--------VSVGCYA 117 P+ Y + G N G + IHG+ S GC Sbjct: 310 KVHEPNYTYTAENGSKSILPPGPNNPVGSVWIGLSKPSYGIHGSPDPARISRQASAGCIR 369 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + ++ Sbjct: 370 LTNWDALALLGVIQSGATVEFK 391 >ErfK_YbiS_YhnG_Q5KXE9_24-150_PF03734.4 Length = 127 Score = 89.1 bits (220), Expect = 5e-17 Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 28/141 (19%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + + + K KL L + + ++ YP+ +PEG ++V Sbjct: 1 EAKPLVIVNKAINKLALVR-----DGRIEAVYPVATG---------VNADLTPEGMFTVT 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCYA 117 P R N G G+ IHG VS GC Sbjct: 47 VKAKYPYYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQYVSQGCVR 106 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M + ++ ++ V Sbjct: 107 MHNRDVEHLYERVPIGANVLI 127 >gi|71364962|ref|ZP_00655525.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 432 Score = 89.1 bits (220), Expect = 5e-17 Identities = 19/142 (13%), Positives = 43/142 (30%), Gaps = 32/142 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + K ++ L + +L+ +YP S SP+G + + Sbjct: 305 RVVANKADKTLYAYNDD-----KLVATYPTTVGSDST---------PSPQGTFKIVNKVK 350 Query: 76 NPDSRYYLA---------INIGFPNAYDRAHG-YTGKYLMIHGAC--------VSVGCYA 117 P + + + G + + +HG+ S GC Sbjct: 351 MPWYKATVGEGADKKVHMLPPGPNSPVGVVWMGLSKPSYGLHGSPKPEGISRQASAGCVR 410 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + E++A + + Sbjct: 411 LTNWDVLEVYANIENGATVELK 432 >gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psychrobacter arcticum 273-4] Length = 173 Score = 89.1 bits (220), Expect = 5e-17 Identities = 28/171 (16%), Positives = 48/171 (28%), Gaps = 54/171 (31%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I I ++ L ++K + ++I YP+ G+G ++ G +P G + + Sbjct: 11 IVISIAQQTLTVYKRQ-----KVIAQYPVSTAKNGMGSQQDSGC--TPLGKHVIAEKIGA 63 Query: 74 ---------QLNPDS-RYYLAINIGFPNAYDRAHGY-----------------------T 100 P Y + P D Sbjct: 64 GMLSNAVFIGRVPTGETYNSELGASHP-ERDWILSRILWLSGLEEGVNKGSNSQGGCDTY 122 Query: 101 GKYLMIHGACVS--------VGCYAMTDAQIDEIFAFVRD--AFVGGQPSV 141 +Y+ IHG S GC M + I E+F V + Sbjct: 123 QRYIYIHGTPDSEPMGIPLSHGCVRMRNQDIIELFEQVDVDKGTPVNIIAQ 173 >gi|53804847|ref|YP_113494.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str. Bath] Length = 481 Score = 89.1 bits (220), Expect = 5e-17 Identities = 19/171 (11%), Positives = 39/171 (22%), Gaps = 35/171 (20%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 G+ I ++ + + + + Q ++++ + + G + Sbjct: 316 STGTDRKIFVYLDTQTMTAVEN-----GQTVRTFKVSTGKPQT---------PTVTGSFY 361 Query: 70 V-------QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMT 119 + I P A Y H G S GC M+ Sbjct: 362 IYARFPTKTMKSRAKKGEKGHYIVENVPYAQYFYSDYAFHGAWWHNGFGRPASHGCVNMS 421 Query: 120 -----------DAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 ++ + S R+ QR R Sbjct: 422 TQKHNVRWPKAPEDAGWLYQWASLGVPVTVMHSPPSSTSTRIALEEPQRDR 472 >gi|68189539|gb|EAN04205.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 490 Score = 89.1 bits (220), Expect = 5e-17 Identities = 29/152 (19%), Positives = 44/152 (28%), Gaps = 22/152 (14%) Query: 7 KQQLPGSPV-----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWS----GGLGPKRR 57 K PG P I K +++ L+ +LI YP S G + Sbjct: 343 KVANPGQPAKSAVARIVADKSRKQVRLFDEG----GRLIGVYPATIGSSDTPSPTGIHQV 398 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGACV----- 111 E +P Y + N ++ L I G + IHG Sbjct: 399 ERVALNPNYTYDPRKNFKQGNNDKVLTIPPGPNGPVGSVWIALSKPTYGIHGTPEPSKIG 458 Query: 112 ---SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ E+ V+ Sbjct: 459 KTYSHGCVRLTNWDAQELAKRVKPGVTVEFTE 490 >ErfK_YbiS_YhnG_Q897S3_37-150_PF03734.4 Length = 114 Score = 89.1 bits (220), Expect = 6e-17 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 31/131 (23%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + E K+ L + + I+ YPI + SP G + + N Sbjct: 6 ILVDISEFKMYLIEKGSN---KPIRRYPIAGGKP---------ETPSPYGTWKITSKSAN 53 Query: 77 PDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIF 127 S + + + P IHG S GC M + ++E++ Sbjct: 54 WGSGFGTRWMGLNVP----------WGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELY 103 Query: 128 AFVRDAFVGGQ 138 +V + Sbjct: 104 KYVDVGTIVVI 114 >ErfK_YbiS_YhnG_Q8X604_93-232_PF03734.4 Length = 140 Score = 89.1 bits (220), Expect = 6e-17 Identities = 25/143 (17%), Positives = 37/143 (25%), Gaps = 21/143 (14%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGP----KRREGDFQSPEGFY 68 I + E +L + + + YPI GL R +P Sbjct: 2 PRQGIIVNLAELRLYYYPPGEN----IXQVYPIGIGLQGLETPVMETRVGQKIPNPTWTP 57 Query: 69 SVQPNQL--NPDSRYYLAINIGFPNAYDRAHGY---TGKYLMIHGACV--------SVGC 115 + Q + + G N R +IHG S GC Sbjct: 58 TAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGC 117 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 M I +F+ VR Sbjct: 118 IRMNAPDIKALFSSVRTGTPVKV 140 >gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Bacillus cereus G9241] Length = 153 Score = 89.1 bits (220), Expect = 6e-17 Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 28/137 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + IKS+ + +P+G + + N Sbjct: 31 LIVNTQLNKMDYYQN-----GKFIKSFTVATGKAAT---------PTPKGTFQIVNKIKN 76 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGACV--------SVGCYAMTDAQ 122 N G G IHG ++GC M + Sbjct: 77 RPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNND 136 Query: 123 IDEIFAFVRDAFVGGQP 139 I +F + Sbjct: 137 IHWLFERIPQQATVTVK 153 >gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC 14580] Length = 165 Score = 88.7 bits (219), Expect = 7e-17 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 35/135 (25%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ +L+K+YPI Q+P G + + Sbjct: 56 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVGKILT---------QTPRGEFVIVNR 101 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGAC--------VSVGCYAMTDAQID 124 Q NP + + ++ IHG VS GC M + + Sbjct: 102 QPNPGG------------PFGAYWLSLSKQHYGIHGTNNPSSIGKAVSRGCIRMHNRDVL 149 Query: 125 EIFAFVRDAFVGGQP 139 E+ + V + Sbjct: 150 ELASIVPNGTRVSIT 164 >ErfK_YbiS_YhnG_Q8YN03_53-168_PF03734.4 Length = 116 Score = 88.7 bits (219), Expect = 8e-17 Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 17/127 (13%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 +I+I ++L W+ + + + I + G + +Q Sbjct: 4 RWIQINLANQRLIAWEG-----GKPVYAIVISSGK---------RSTPTRIGSFKIQSKH 49 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMTDAQIDEIFAFVR 131 + R P A + Y H G VS GC + +F + Sbjct: 50 KSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHRKFGTPVSNGCVNLAPNHAQWLFNWAS 109 Query: 132 DAFVGGQ 138 Sbjct: 110 LGTPVVI 116 >gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter pomeroyi DSS-3] Length = 216 Score = 88.7 bits (219), Expect = 8e-17 Identities = 19/134 (14%), Positives = 35/134 (26%), Gaps = 19/134 (14%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFYSVQP 72 + R + W A K YP G +P + Sbjct: 87 LLADISSRAVHYWGADGS-----YKLYPSSVPMTEELTRRGYTEVVRKTVNPSWTPTASM 141 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQI 123 + +P + N Y T ++HG S GC + + + Sbjct: 142 RERDPTLPVRMEGGE-VGNPLGTRAMYLTWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHV 200 Query: 124 DEIFAFVRDAFVGG 137 +E++ V+ Sbjct: 201 EELYELVQVGTQVR 214 >gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein family [Psychrobacter arcticum 273-4] Length = 473 Score = 88.7 bits (219), Expect = 8e-17 Identities = 19/142 (13%), Positives = 43/142 (30%), Gaps = 32/142 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + K ++ L + +L+ +YP S SP+G + + Sbjct: 346 RVVANKADKTLYAYNDD-----KLVATYPTTVGSDST---------PSPQGTFKIVNKVK 391 Query: 76 NPDSRYYLA---------INIGFPNAYDRAHG-YTGKYLMIHGAC--------VSVGCYA 117 P + + + G + + +HG+ S GC Sbjct: 392 MPWYKATVGEGTDKKVHMLPPGPNSPVGVVWMGLSKPSYGLHGSPKPEGISRQASAGCVR 451 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + E++A + + Sbjct: 452 LTNWDVLEVYANIENGATVELK 473 >gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 386 Score = 88.4 bits (218), Expect = 9e-17 Identities = 17/146 (11%), Positives = 41/146 (28%), Gaps = 34/146 (23%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 + + + E+K +++ ++ L K++ G ++P G + Sbjct: 258 ITSNTNYLVFVNIAEQKTYVYEGSKN-DWTLDKTFTCSTGIEGK---------ETPVGVF 307 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH----------------GACVS 112 +VQ S Y + + + H G S Sbjct: 308 TVQNRAPWFFSPKYGQGG--------KYYVQFMGNYLFHSIPFDSDKTTVSDPTLGVPSS 359 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC ++ ++ V++ Sbjct: 360 HGCIRLSVEDSKWLYDNVQNGSKIII 385 >gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Azoarcus sp. EbN1] Length = 162 Score = 88.4 bits (218), Expect = 1e-16 Identities = 29/164 (17%), Positives = 46/164 (28%), Gaps = 47/164 (28%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 IRI ++L L+ G + I+ YP+ G G R G +P G + ++ Sbjct: 6 IRISIAAQRLFLF----GPDGACIRCYPVSTGEKGAGEVRDSGC--TPRGLHRIRARIGA 59 Query: 74 ----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKYL 104 + + + P D +Y+ Sbjct: 60 NAPAGAVFRGRRRTGEVWSPGLAAQHPG-RDWILSRILWLCGCEPGRNRLGDVDSMRRYI 118 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 IHG S GC M + I E+F V Sbjct: 119 YIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVGTAVEIVG 162 >ErfK_YbiS_YhnG_Q89MP2_90-201_PF03734.4 Length = 112 Score = 88.4 bits (218), Expect = 1e-16 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 15/125 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ I + + +K+ ++ + P+ G +P G +SV Sbjct: 3 PLVIVVSIDRQKVTVYDTNG-----VFAESPVSTGMKG---------HSTPMGVFSVIQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 S Y + + + + + G S GC M A +++ + + Sbjct: 49 HKFHHSNIYSGAPMPYMQRITWSGVAMHAGV-LPGYPASHGCIRMPMAFAVKMWNWTKMG 107 Query: 134 FVGGQ 138 Sbjct: 108 ARVIV 112 >gi|68270035|ref|ZP_00576285.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073] Length = 332 Score = 88.4 bits (218), Expect = 1e-16 Identities = 25/170 (14%), Positives = 48/170 (28%), Gaps = 39/170 (22%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 + PG + I I E L + + ++ + YP+ S Sbjct: 131 QAPAGPPPGKNLKIVIDTERLVLTIL-----VDGRVFQKYPVAIGK---------YTSPS 176 Query: 64 PEGFYSVQPNQLNPDSRY-YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 P G + + + + + P IHG S G Sbjct: 177 PVGEWKIVDKAYESGGAFGTRWMGLNVP----------WGNYGIHGTNRPWSIGWAASAG 226 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNY 164 C+ M + I+ I+ ++ P+ M ++ + SP Sbjct: 227 CFRMFNEDIETIYPWIPVGTPVVVKG------PYTMPTGPLKPGQGSPEV 270 >ErfK_YbiS_YhnG_Q5LRC4_82-215_PF03734.4 Length = 134 Score = 88.4 bits (218), Expect = 1e-16 Identities = 19/134 (14%), Positives = 35/134 (26%), Gaps = 19/134 (14%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFYSVQP 72 + R + W A K YP G +P + Sbjct: 6 LLADISSRAVHYWGADGS-----YKLYPSSVPMTEELTRRGYTEVVRKTVNPSWTPTASM 60 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACV--------SVGCYAMTDAQI 123 + +P + N Y T ++HG S GC + + + Sbjct: 61 RERDPTLPVRMEGGE-VGNPLGTRAMYLTWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHV 119 Query: 124 DEIFAFVRDAFVGG 137 +E++ V+ Sbjct: 120 EELYELVQVGTQVR 133 >gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacterium efficiens YS-314] Length = 403 Score = 88.4 bits (218), Expect = 1e-16 Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + +E++ L+++ P+ ++ +P G Y + Sbjct: 240 GDRVEAVVDDNTKTMEVYHN-----GTLLRTIPVSLGRD-------TDEWATPNGIYIIG 287 Query: 72 PNQLNPDSRYYLA-INIGFPN-----AYDRAHGYTGKYLMIHGACVS----------VGC 115 NP +G+ D A + + +H A S GC Sbjct: 288 D--RNPSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVSHGC 345 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSV 141 +T V+ + + Sbjct: 346 INVTTEAAQWFQNTVKRGDIVTVKNT 371 >gi|71543960|ref|ZP_00665019.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 224 Score = 88.4 bits (218), Expect = 1e-16 Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 42/170 (24%) Query: 5 ELKQQLPGSPVY---IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 + P S + I ++KE+R+L + ++ L++ YPI G K R+GD Sbjct: 61 RVDYLTPASAIKSPEIFVYKEKRRLYVIQSN-----VLVRDYPIGLGPHPSGDKDRDGDG 115 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYT--------------------- 100 ++PEG + + + + ++ I +P Y Sbjct: 116 RTPEGDFFIIVKGSSERLK--KSLAISYPGRGHAEKAYFSGVITPLEFRDILRAADNRSA 173 Query: 101 -------GKYLMIH--GAC--VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 G + IH GA + G A+ D+ ++E+F Sbjct: 174 PPSGTVLGGKIFIHAGGAHKDWTDGSIALYDSDMEELFTVASVGTPVSIR 223 >gi|29654687|ref|NP_820379.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 493] Length = 175 Score = 88.0 bits (217), Expect = 1e-16 Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 17/135 (12%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + ++ +LIK + G PK + ++P G + + Sbjct: 50 RLFVFDPKRHRWYAYQN-----GRLIKQGRASGGAYGC-PKNKSRSCRTPSGTFRIIRKG 103 Query: 75 L-NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEI- 126 N S Y + G A + IHG S GC +T A + Sbjct: 104 PPNCKSTRYPKPHGG---ARMDYCMCYHAFYCIHGSDHVPNYHASHGCIRVTPADARWLS 160 Query: 127 FAFVRDAFVGGQPSV 141 F++ S Sbjct: 161 HNFIQYGTKVVVKSY 175 >ErfK_YbiS_YhnG_Q60BQ3_102-241_PF03734.4 Length = 140 Score = 88.0 bits (217), Expect = 1e-16 Identities = 23/142 (16%), Positives = 41/142 (28%), Gaps = 19/142 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREGDFQSPEGFY 68 + I +L + A +I +YP+ G G + P Y Sbjct: 2 PRKGMVINLATMRLYHFPA--KAAEGVISTYPVGIGKEGRSTPTGYMTVVRKTEFPTW-Y 58 Query: 69 SVQPNQLNPDSRY---YLAINIGFPNAYDRAHGY-TGKYLMIHGAC--------VSVGCY 116 + + + + A++ G N Y + +IHG S GC Sbjct: 59 PTENIRRDHALKGDPLPPAVSPGPDNPLGDYAMYLSRPQYLIHGTNKPYSIGFRASNGCI 118 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 + I +F V+ Sbjct: 119 RLYPEDIAAVFPEVKPGAAVRI 140 >gi|68552645|ref|ZP_00592032.1| ErfK/YbiS/YcfS/YnhG [Prosthecochloris aestuarii DSM 271] Length = 174 Score = 87.6 bits (216), Expect = 1e-16 Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 25/147 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 P+ + + P I ++ ER++ ++ A + P+ Sbjct: 43 PIDIQKALEYVPIPKQISDYRGEREIRVFLALQYFGAYENGAIAFWGPVSSGKK------ 96 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 + G + V Q S I + NA IH G Sbjct: 97 ---SRPTRPGKFVVNYKQRYKRS-------IKYHNAPMPYAINYNGGYFIHEQSLPGYPA 146 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + ++F +++ Sbjct: 147 SHGCIRLLMSDAKKLFYWIKIGDPVTI 173 >ErfK_YbiS_YhnG_Q55969_52-167_PF03734.4 Length = 116 Score = 87.6 bits (216), Expect = 2e-16 Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 27/132 (20%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 +I + ++L W+ + + + I G + G +++Q + Sbjct: 4 RWIEVNLSTQRLIAWEGN-----KPVYAIIISTGKKGT---------PTIPGIFTIQSKR 49 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------ACVSVGCYAMTDAQIDEI 126 R + Y IHG VS GC + + Sbjct: 50 SIDRMR-----GADYDIDDVPYAQYYSGGYAIHGAYWHNKFGTPVSHGCINLAVDHAKWL 104 Query: 127 FAFVRDAFVGGQ 138 F + + Sbjct: 105 FNWSEISTPLVI 116 >gi|15025657|gb|AAK80578.1| Uncharacterized protein, ErfK family [Clostridium acetobutylicum ATCC 824] Length = 229 Score = 87.6 bits (216), Expect = 2e-16 Identities = 19/139 (13%), Positives = 48/139 (34%), Gaps = 23/139 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P+ I + E++++ ++ AK +L+ S+ G + +P+G Y++ Sbjct: 104 AEKPLRIDVDLEKQRVNIYDAKS----RLVNSFVCSSGMNG---------YDTPKGEYTI 150 Query: 71 QPN-------QLNPDSRYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTD 120 + + N + Y++ + +D+ + G S GC + Sbjct: 151 KERGYSFYSQKYNEGAYYWVQFMGNYLFHSVPFDKNKNIEPNEVNKLGNKASHGCIRLPI 210 Query: 121 AQIDEIFAFVRDAFVGGQP 139 I+ + + Sbjct: 211 DNAKWIYDNIPRGTLVNIK 229 >gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 429 Score = 87.2 bits (215), Expect = 2e-16 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 13/138 (9%) Query: 13 SPVYIR-IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +P I + K ++ +++ L ++P G K EGD ++PEG Y ++ Sbjct: 41 TPRRILAVDKNHQRFLIFE--RHSPLALRGTFPCTTGQAD-GDKVAEGDLRTPEGIYFIE 97 Query: 72 PNQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----AC-VSVGCYAMTDAQ 122 + L+ +A + +PN DR +G + IH + GC A+ Sbjct: 98 GKRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGD 157 Query: 123 IDEIFAFVRDAFVGGQPS 140 ID + + Sbjct: 158 IDALAGTLAPGTPVAVAD 175 >ErfK_YbiS_YhnG_Q81XG3_27-152_PF03734.4 Length = 126 Score = 87.2 bits (215), Expect = 2e-16 Identities = 18/136 (13%), Positives = 37/136 (27%), Gaps = 28/136 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + K++ ++ + IKS+ + +P+G + + N Sbjct: 5 LIVNTQLNKMDYYQN-----GKFIKSFTVATGKAAT---------PTPKGTFKIVNKIKN 50 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGACV--------SVGCYAMTDAQ 122 N G G IHG ++GC M + Sbjct: 51 RPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNND 110 Query: 123 IDEIFAFVRDAFVGGQ 138 I +F + Sbjct: 111 IHWLFERIPQQATVTV 126 >ErfK_YbiS_YhnG_Q5P0G8_3-160_PF03734.4 Length = 158 Score = 87.2 bits (215), Expect = 2e-16 Identities = 29/162 (17%), Positives = 46/162 (28%), Gaps = 47/162 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 IRI ++L L+ G + I+ YP+ G G R G +P G + ++ Sbjct: 4 IRISIAAQRLFLF----GPDGACIRCYPVSTGEKGAGEVRDSGC--TPRGLHRIRARIGA 57 Query: 74 ----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKYL 104 + + + P D +Y+ Sbjct: 58 NAPAGAVFRGRRRTGEVWSPGLAAQHPG-RDWILSRILWLCGCEPGRNRLGDVDSMRRYI 116 Query: 105 MIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 IHG S GC M + I E+F V Sbjct: 117 YIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVGTAVEI 158 >ErfK_YbiS_YhnG_Q8PB12_56-167_PF03734.4 Length = 112 Score = 87.2 bits (215), Expect = 2e-16 Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 15/125 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + E++ ++ LI I G ++P G +++ Sbjct: 3 PMAVIVSLTEQRAYAYRN-----GILIGVSTISSGKPG---------HETPTGVFTILQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 + S Y A + + + G S GC + +F Sbjct: 49 DKDHRSSIYNAAPMPYQQRLTWDGVALHAG-GLPGYPESHGCVHLPSEFARLLFDNSNMG 107 Query: 134 FVGGQ 138 V Sbjct: 108 MVVVV 112 >gi|48871054|ref|ZP_00323771.1| COG5295: Autotransporter adhesin [Pediococcus pentosaceus ATCC 25745] Length = 467 Score = 87.2 bits (215), Expect = 2e-16 Identities = 16/136 (11%), Positives = 36/136 (26%), Gaps = 25/136 (18%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + K + + +K + +L S + + +P G + V + Sbjct: 343 YVEVDKTNQHMWYYK-----DGKLKISTDVVTGMP-------ANNDDTPTGVFFVWNKKR 390 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-------------ACVSVGCYAMTDAQ 122 N + + + + +H S GC A Sbjct: 391 NATLKGKNTDGSNYASPVSYWMPIDYTGVGLHDASWQPKFGGDWYKTHGSHGCVNTPPAT 450 Query: 123 IDEIFAFVRDAFVGGQ 138 + ++A V Sbjct: 451 MKTVYAEVALGTPVVV 466 >gi|17936017|ref|NP_532807.1| hypothetical protein Atu2133 [Agrobacterium tumefaciens str. C58] Length = 472 Score = 87.2 bits (215), Expect = 2e-16 Identities = 31/157 (19%), Positives = 45/157 (28%), Gaps = 35/157 (22%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPE 65 + G I K +++ + G + LI +YP S D SP Sbjct: 329 PGEAKKGQVARIVAHKGIKQVFAY----GQDGNLIAAYPATIGS---------TDTPSPS 375 Query: 66 GFYSVQPNQLNPDSRYYLAI-------------NIGFPNAYDRAH-GYTGKYLMIHGAC- 110 G ++V+ LNP Y I G + IHG Sbjct: 376 GTHTVERIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKPTYGIHGTPE 435 Query: 111 -------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ E+ VR V Sbjct: 436 PSKIGKTNSHGCIRLTNWDATELAKMVRPGVVVEFAE 472 >ErfK_YbiS_YhnG_Q727B1_41-173_PF03734.4 Length = 133 Score = 87.2 bits (215), Expect = 2e-16 Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 13/136 (9%) Query: 13 SPVYIR-IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +P I + K ++ +++ L ++P G K EGD ++PEG Y ++ Sbjct: 1 TPRRILAVDKNHQRFLIFE--RHSPLALRGTFPCTTGQAD-GDKVAEGDLRTPEGIYFIE 57 Query: 72 PNQ---LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----AC-VSVGCYAMTDAQ 122 + L+ +A + +PN DR +G + IH + GC A+ Sbjct: 58 GKRTSGLDYGLYGGIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGD 117 Query: 123 IDEIFAFVRDAFVGGQ 138 ID + + Sbjct: 118 IDALAGTLAPGTPVAV 133 >gi|27377359|ref|NP_768888.1| hypothetical protein blr2248 [Bradyrhizobium japonicum USDA 110] Length = 520 Score = 87.2 bits (215), Expect = 2e-16 Identities = 20/155 (12%), Positives = 43/155 (27%), Gaps = 34/155 (21%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 G P+ + + +++ + A I P+ + G ++P G +++ Sbjct: 55 AGEPIMAIVSIKSQQVTFYDADGW-----ILRAPVSTGTTG---------RETPAGVFAI 100 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC-----VSVGCYAMTDAQID 124 + S + +A+ T + +HG S GC M + Sbjct: 101 VEKDKDHHSTM-------YDDAWMPNMQRITWNGIALHGGPLPGYAASHGCVRMPFGFAE 153 Query: 125 EIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 +F I P + Sbjct: 154 GLFDKTNIGMRV-------IISPNDAAPVDFNHPS 181 >gi|68263184|emb|CAI36672.1| putative lipoprotein [Corynebacterium jeikeium K411] Length = 402 Score = 86.8 bits (214), Expect = 3e-16 Identities = 16/144 (11%), Positives = 40/144 (27%), Gaps = 26/144 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G + + + + + + +++ P+ + +P G Y + Sbjct: 245 GDAMRAIVDDSTKMMTI-----KKNGKTVQTMPVSLGRD--------YQYPTPNGKYIIG 291 Query: 72 PNQLNPD---SRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAM 118 S + L + A + + IH A S GC + Sbjct: 292 DQFETLTMDSSTFGLTGAGSYVTDVQYATQMSYSGIYIHAAPWSVYAQGNTNTSHGCINV 351 Query: 119 TDAQIDEIFAFVRDAFVGGQPSVQ 142 + +F ++ + + Q Sbjct: 352 SVENAAWVFNNMKRGDIVEVKNTQ 375 >gi|28377421|ref|NP_784313.1| hypothetical protein lp_0536 [Lactobacillus plantarum WCFS1] Length = 464 Score = 86.8 bits (214), Expect = 3e-16 Identities = 17/136 (12%), Positives = 37/136 (27%), Gaps = 26/136 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + KE + + ++ + +L S I G + G + + + Sbjct: 341 YVEVDKENQHMYVY-----VDGKLTVSTDIVTGKPG--------KHATTTGVWYIWNKEK 387 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N + + + IH + S GC + Sbjct: 388 NATLKGDNDDGSSYSQPVSYWMPFDDTGEGIHDSSWQTQYGGTWYKKHGSHGCVNTPPSV 447 Query: 123 IDEIFAFVRDAFVGGQ 138 + ++FA V Sbjct: 448 MKKVFAAVPVGTPVIV 463 >ErfK_YbiS_YhnG_Q65K99_54-163_PF03734.4 Length = 110 Score = 86.8 bits (214), Expect = 3e-16 Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 35/134 (26%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I + R L L++ +L+K+YPI Q+P G + + Sbjct: 3 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVGKILT---------QTPRGEFVIVNR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGAC--------VSVGCYAMTDAQID 124 Q NP + + ++ IHG VS GC M + + Sbjct: 49 QPNPGG------------PFGAYWLSLSKQHYGIHGTNNPSSIGKAVSRGCIRMHNRDVL 96 Query: 125 EIFAFVRDAFVGGQ 138 E+ + V + Sbjct: 97 ELASIVPNGTRVSI 110 >ErfK_YbiS_YhnG_Q98G98_358-493_PF03734.4 Length = 136 Score = 86.8 bits (214), Expect = 3e-16 Identities = 26/148 (17%), Positives = 41/148 (27%), Gaps = 35/148 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K ++++ + +L+ +YP S D SP G ++V Sbjct: 2 PVARIVADKTKKEVYAYD----ASGKLVAAYPATIGSA---------DTPSPTGIHAVSR 48 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 L+P+ Y L I G IHG Sbjct: 49 IALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDKPTYGIHGTPEPSKIGKT 108 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ V Sbjct: 109 ESHGCVRLTNWDARELAKLVSPGVTVEF 136 >ErfK_YbiS_YhnG_Q92KF1_25-137_PF03734.4 Length = 113 Score = 86.4 bits (213), Expect = 3e-16 Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 26/132 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +P+ + + ++++ L ++ ++ + + G +P G +S+ Sbjct: 2 TPLQVVVSRDQQSLVVYDGD-----TVVATSKVSTGKAG---------HATPTGIFSILE 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEI 126 + +S Y P + + T + +HG S GC + + Sbjct: 48 KRRRHESNIYS----NAPMPFMQRL--TWSGIALHGSNHVPDYPASHGCVRLPGKFAASL 101 Query: 127 FAFVRDAFVGGQ 138 F Sbjct: 102 FKMTGYGMHVVI 113 >ErfK_YbiS_YhnG_Q6N3B5_55-166_PF03734.4 Length = 112 Score = 86.4 bits (213), Expect = 4e-16 Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 15/127 (11%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P+ + + +++ L+ ++ I P+ + G ++P G ++V Sbjct: 1 GEPIMAIVSIKGQRVTLYDSEGW-----IYRAPVSTGTTG---------RETPAGVFAVV 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVR 131 + S Y + + G S GC M +++F R Sbjct: 47 EKDKDHRSTMYDDAWMPNMQRITWNGVALHGG-PLPGYPASHGCVRMPYEFAEKLFDKTR 105 Query: 132 DAFVGGQ 138 Sbjct: 106 IGMRVIV 112 >gi|62514272|ref|ZP_00385780.1| COG1376: Uncharacterized protein conserved in bacteria [Lactobacillus casei ATCC 334] Length = 483 Score = 86.4 bits (213), Expect = 4e-16 Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 27/136 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + KE++ K + +++ I G +P G + V Q Sbjct: 361 YVEVSKEKQHEWYIK-----DGKVVMDSDIVTGKPG---------QDTPSGVFYVWSKQR 406 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N R + + + +H + S GC Sbjct: 407 NATLRGKNDDGSSYASPVSYWMPIDYTGVGLHDSPWQPKYGGDWYKEHGSHGCVNNPPDF 466 Query: 123 IDEIFAFVRDAFVGGQ 138 + +++A V + Sbjct: 467 MAKLYAAVDEGTPVIV 482 >ErfK_YbiS_YhnG_Q83BD4_91-228_PF03734.4 Length = 138 Score = 86.0 bits (212), Expect = 4e-16 Identities = 20/146 (13%), Positives = 34/146 (23%), Gaps = 37/146 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +L + +YP+ ++ +P G + N Sbjct: 6 IVINLAAMRLYYFPKGKN----YFYTYPVGIGR---------FNWSTPLGKLHIIQKIKN 52 Query: 77 PDSRYYLA---------------INIGFPNAYDRAHGY-TGKYLMIHGACV--------S 112 P + + G N + +IHG S Sbjct: 53 PVWVVPDSILRYRQENGDPVPKMMPSGPENPLGYYALRLSQPTYLIHGTNDPSSVGRRSS 112 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + I +F V Sbjct: 113 AGCIHLYPEDIKALFGMVSVDTPVLI 138 >gi|67934041|ref|ZP_00527134.1| Peptidoglycan-binding domain 1:ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 317 Score = 86.0 bits (212), Expect = 5e-16 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 17/148 (11%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDF 61 + P + + K E + + +L+ Y S +G + +G Sbjct: 174 VVVMTPPQAARVVVSKSESSVRAYDEG----GKLLAFYSATIGSEHDPLPIGEWKIKGVG 229 Query: 62 QSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------S 112 ++P+ Y+ + D + G N + ++ IHG S Sbjct: 230 RNPKFHYNAELFWDAKDRNDRETLPPGPNNPVGLVWIDLSKEHYGIHGTPEPGKIGHTES 289 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC +T+ E+ A VR Sbjct: 290 HGCIRLTNWDALELAAMVRPGTPASLKE 317 >gi|68195822|gb|EAN10258.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium DO] Length = 466 Score = 86.0 bits (212), Expect = 5e-16 Identities = 16/139 (11%), Positives = 36/139 (25%), Gaps = 27/139 (19%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 YI + E + + +K + ++ I +P G + V Sbjct: 341 EDTYIEVDLENQHMWYYK-----DGKVALETDIVSGKPTT---------PTPAGVFYVWN 386 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMT 119 + + + + + + + IH + S GC Sbjct: 387 KEEDATLKGTNDDGTPYESPVNYWMPIDWTGVGIHDSDWQPEYGGDLWKTRGSHGCINTP 446 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 + + E+F V Sbjct: 447 PSVMKELFGMVEKGTPVLV 465 >ErfK_YbiS_YhnG_Q6N5E1_100-211_PF03734.4 Length = 112 Score = 86.0 bits (212), Expect = 5e-16 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 15/125 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 PV I + E++KL ++ A L P+ G +P G +SV Sbjct: 3 PVVIAVSIEQQKLRVYDANG-----LFAETPVSTGMRG---------HSTPMGVFSVIQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 S Y + + + + G S GC M +++ + R Sbjct: 49 SKYHRSNIYSGAPMPYMQRITWSGIALHAG-ALPGYPASHGCIRMPMTFAVKMWGWTRMG 107 Query: 134 FVGGQ 138 Sbjct: 108 ARVIV 112 >gi|67934945|ref|ZP_00527970.1| ErfK/YbiS/YcfS/YnhG [Chlorobium phaeobacteroides DSM 266] Length = 284 Score = 86.0 bits (212), Expect = 5e-16 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 25/148 (16%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKA----KMGGEYQLIKSYPICKWSGGLGPKR 56 PV +E ++ P + + ER++ ++ + + L+ + Sbjct: 149 PVEREKAEKYVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAVSTGK------- 201 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH-----GACV 111 +P G + V Q S I + NA +H G Sbjct: 202 --RTNATPPGKFVVNYKQRFKKS-------IKYDNAPMPYSINYNGGYFMHQQSLPGYPA 252 Query: 112 SVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 S GC + + + +F + + Sbjct: 253 SHGCVRLLMSDAERLFTWAKLKDPVTVV 280 >ErfK_YbiS_YhnG_O34816_53-162_PF03734.4 Length = 110 Score = 86.0 bits (212), Expect = 5e-16 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 35/134 (26%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I + + L L +++K+YPI Q+P G + + Sbjct: 3 PYHIAVSIGAKTLTLSLNN-----RVMKTYPIAVGKILT---------QTPTGEFYIINR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGAC--------VSVGCYAMTDAQID 124 Q NP + + ++ IHG VS GC M + + Sbjct: 49 QRNPGG------------PFGAYWLSLSKQHYGIHGTNNPASIGKAVSKGCIRMHNKDVI 96 Query: 125 EIFAFVRDAFVGGQ 138 E+ + V + Sbjct: 97 ELASIVPNGTRVTI 110 >ErfK_YbiS_YhnG_Q8P5X3_187-321_PF03734.4 Length = 135 Score = 86.0 bits (212), Expect = 5e-16 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 17/138 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + I K + L L+ + ++ +P+ S +G + G + P+ Y Sbjct: 2 KPAKLVIDKSDSTLRLFD----AQGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKFHY 57 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + + G N R + + +HG S GC +T Sbjct: 58 NPKLFWDAKPGEGKATLPPGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 117 Query: 120 DAQIDEIFAFVRDAFVGG 137 + + + + V + Sbjct: 118 NWDVVNLASVVDASVPVV 135 >ErfK_YbiS_YhnG_Q9X212_261-383_PF03734.4 Length = 123 Score = 86.0 bits (212), Expect = 5e-16 Identities = 28/138 (20%), Positives = 44/138 (31%), Gaps = 26/138 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 +PV I + KL L+ + L+K YP+ +P G Y V Sbjct: 1 ENPVTIVVNLFSSKLALY-----YDGVLLKVYPVALGR----------SDATPPGRYWVL 45 Query: 72 PNQLNPDSRYYLAI--NIGFPNAYD-RAHGYTGKYLMIHGA--CV------SVGCYAMTD 120 +++P ++ N R + IHG S GC M + Sbjct: 46 RKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYAIHGTSKPWEIGKRISHGCIRMFN 105 Query: 121 AQIDEIFAFVRDAFVGGQ 138 ++EI AF Sbjct: 106 RDVEEIDAFAGVGTEVVV 123 >gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 351 Score = 85.7 bits (211), Expect = 6e-16 Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 15/125 (12%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P+ + + E++ ++ LI I G ++P G +++ Sbjct: 58 PMAVIVSLTEQRAYAYRN-----GILIGVSTISSGKPG---------HETPTGVFTILQK 103 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 + S Y A + + + G S GC + +F Sbjct: 104 DKDHRSSIYNAAPMPYQQRLTWDGVALHAG-GLPGYPESHGCVHLPSEFARLLFDNSNMG 162 Query: 134 FVGGQ 138 V Sbjct: 163 MVVVV 167 >ErfK_YbiS_YhnG_Q67P27_207-347_PF03734.4 Length = 141 Score = 85.7 bits (211), Expect = 6e-16 Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 28/148 (18%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ----SPEGF 67 P I + K L ++ + +L+++ + GP ++ +P G Sbjct: 1 PEPTVIVVDKGLNVLWYYE-----DGELVQTARVSTGRHVAGPAPSPDNWTENLLTPTGR 55 Query: 68 YSVQPNQLNPDSRYYLAI--NIGFPNAYDRAH-------GYTGKYLMIHGACV------- 111 ++V P YY + N G G IHG Sbjct: 56 FTVTLMV--PGMPYYKEGIDALDPANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALGRW 113 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S G M++ ++++++ V Sbjct: 114 NSEGSIVMSNGEVEQLYERVELGTPVII 141 >gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A Resolution Length = 164 Score = 85.7 bits (211), Expect = 7e-16 Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 35/134 (26%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I + + L L ++ K+YPI Q+P G + + Sbjct: 55 PYHIAVSIGAKTLTLSLNN-----RVXKTYPIAVGKILT---------QTPTGEFYIINR 100 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGAC--------VSVGCYAMTDAQID 124 Q NP + + + IHG VS GC + + Sbjct: 101 QRNPGG------------PFGAYWLSLSAAHYGIHGTNNPASIGKAVSKGCIRXHNKDVI 148 Query: 125 EIFAFVRDAFVGGQ 138 E+ + V + Sbjct: 149 ELASIVPNGTRVTI 162 >ErfK_YbiS_YhnG_Q74GR2_117-256_PF03734.4 Length = 140 Score = 85.7 bits (211), Expect = 7e-16 Identities = 23/150 (15%), Positives = 37/150 (24%), Gaps = 35/150 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I I +L +K G + +YP+ + +P+G V Sbjct: 2 PRKGIVINLATMRLFQFKENGGAL--AVSTYPVGIG---------TKERPTPQGPTRVAR 50 Query: 73 NQLNPDSRYYLAI---------------NIGFPNAYDRAHGY-TGKYLMIHGAC------ 110 P +I G N Y + +IHG Sbjct: 51 KASRPTWYVPASIAEDHRKKGDILPARVPPGPENPLGDYALYLSRSGYLIHGTNKPASIG 110 Query: 111 --VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + I+ +F Sbjct: 111 LKASNGCMRLYPEHIEVLFRDTAVNTPVLI 140 >gi|41326655|emb|CAF21137.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family [Corynebacterium glutamicum ATCC 13032] Length = 403 Score = 85.3 bits (210), Expect = 7e-16 Identities = 14/138 (10%), Positives = 38/138 (27%), Gaps = 26/138 (18%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----QPN 73 + + ++K +L+++ P+ +P G Y + + Sbjct: 246 VADDATKTMSVYKN-----GELLRTMPVSFGRDTSEWA-------TPNGTYIIGDRNESM 293 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQI 123 ++ + G+ A + + +H A S GC ++ Sbjct: 294 IMDSTTFGLGYEEGGYRTPVKYATQMSYSGIYVHAAPWSVGAQGSYNTSHGCINVSTENA 353 Query: 124 DEIFAFVRDAFVGGQPSV 141 V+ + + Sbjct: 354 QWFQEAVKRGDIVTVKNT 371 >gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 192 Score = 85.3 bits (210), Expect = 8e-16 Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 45/153 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + R+L + + + LIKS+ + G ++P G + V + Sbjct: 52 LVLDRRSRRLLVLE-----DGSLIKSFSVAVGMPGW---------ETPTGEFQVLSKTPH 97 Query: 77 PDSRYYLA---INIGFPNAYDRAHGYTGKY--------------------LMIHGAC--- 110 P + + I G N + HG Sbjct: 98 PIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRW 157 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + + I ++ V+ Sbjct: 158 TVGRAVSHGCVRLFEEDIQSLYRLVKIGTPLKV 190 >gi|71548891|ref|ZP_00669115.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 181 Score = 85.3 bits (210), Expect = 8e-16 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 47/167 (28%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYP-ICKWSGGLGPKRREGDFQSPEGFYSVQ 71 V+I I E +L + + +++ ++ + G R GD Q+P G + + Sbjct: 22 QDVWILIDTSEHRLSVMRKD-----KVLLTFDNVAIGRYGASRSRMRGDNQTPLGSFQIS 76 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYL--------------------------- 104 + + R+Y I +PN + + Sbjct: 77 WVKQH--DRFYRFYGINYPNREVADLALSEGRISRQVWENIMNAIESTGLSPQDTSLGGY 134 Query: 105 -----------MIHGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 +H + GC A+T+ QID++ +V+ Sbjct: 135 IGIHGIGKGDQAVHSRFNWTNGCVALTNVQIDQLNPWVKLGTRVVIR 181 >gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] Length = 348 Score = 84.9 bits (209), Expect = 1e-15 Identities = 22/149 (14%), Positives = 43/149 (28%), Gaps = 21/149 (14%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 P PV I + E+K +++ I + G ++P G +S Sbjct: 53 SPQGPVTIVVSLTEQKAYIYRN-----GIAIGVSTLSSGKKG---------RETPTGVFS 98 Query: 70 VQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAF 129 + ++ S Y + + + + G S GC + A +++ Sbjct: 99 ILQKSVDHKSDLYNSAPMPYMQRLTWDGIALHAG-NLPGYPASHGCIRLPMAFAKKLYGI 157 Query: 130 VRDAFVGGQPSVQVSIYPFRMTDANMQRH 158 G S V I + Sbjct: 158 T------GFSSTTVIISNASSAPKEVDHP 180 >DUF949_Q83XL8_75-191_PF06104.2 Length = 117 Score = 84.9 bits (209), Expect = 1e-15 Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 8/119 (6%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDS 79 FK ERK+ELW E+ I YP+ +SG LGPK RE D Q PEG Y + NP S Sbjct: 1 FKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVN--FNPFS 58 Query: 80 RYYLAINIGFPNAYDRAHGYT------GKYLMIHGACVSVGCYAMTDAQIDEIFAFVRD 132 +L++ I +PN++DR GY G + IHG +SVGC A+ D ID++F R Sbjct: 59 SMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILARR 117 >gi|15075231|emb|CAC46787.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 454 Score = 84.9 bits (209), Expect = 1e-15 Identities = 27/151 (17%), Positives = 39/151 (25%), Gaps = 35/151 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + +LI +YP S D SP G V+ Sbjct: 317 GKVARIVADKARKQVLAYD----EAGKLIAAYPSTIGSS---------DTPSPSGTVHVE 363 Query: 72 PNQLNPDSRYYLAIN-------------IGFPNAYDRAH-GYTGKYLMIHGACV------ 111 +P Y IN G + IHG Sbjct: 364 RIAFDPGYTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 423 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ E+ V Sbjct: 424 TQSHGCVRLTNWDATELGKMVSTGVTVEFVD 454 >gi|71548935|ref|ZP_00669159.1| ErfK/YbiS/YcfS/YnhG [Nitrosomonas eutropha C71] Length = 159 Score = 84.9 bits (209), Expect = 1e-15 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 47/163 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 I + +++ L +++ YPI G G ++ G F +P G + ++ Sbjct: 2 KIIVDISLQQMTL----QDVTGHIVRCYPISSAKNGTG--QQRGSFHTPLGKHIIRAKIG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 + P Y + PN D +Y Sbjct: 56 QNVPVNTVFVRRRPTGEIYTSELAANHPN-RDWILTRILWLSGCEPGFNRLGSVDTMRRY 114 Query: 104 LMIHGACVSV--------GCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG+ S GC M + + ++F V + Sbjct: 115 IYIHGSPDSAEMGKPGSIGCIRMHNHDLLDLFERVSVGTLVEI 157 >gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis NCTC 9343] Length = 183 Score = 84.5 bits (208), Expect = 1e-15 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ----- 71 + I K+E KL L K Q + + I G K ++GD ++PEG + + Sbjct: 44 LLISKDEMKLRLIDYK----GQELFTADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 98 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQI 123 + I + N + R K + IHG + GC + ++++ Sbjct: 99 SKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSEL 158 Query: 124 DEIFAFVRDAFVGGQP 139 +++ + +R Sbjct: 159 EQLVSLIRVPTTVIIT 174 >gi|67776702|gb|EAM36340.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666] Length = 176 Score = 84.5 bits (208), Expect = 1e-15 Identities = 28/167 (16%), Positives = 48/167 (28%), Gaps = 46/167 (27%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 + I + ++ L L+ L+++YP+ G G EG +P G + ++ Sbjct: 4 IRILVSLHDQALRLYCG-----GVLVRAYPVSTARNGPG--ELEGSACTPRGAHVIRAKI 56 Query: 74 -----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKY 103 P + A D +Y Sbjct: 57 GAGCEAGTVFVARRPTGEMFSAGLAEANPDRDWILTRILWLCGREPGKNRFGAVDTMRRY 116 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 + IHG S+GC M +A I E+F V + Sbjct: 117 IYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQAGP 163 >ErfK_YbiS_YhnG_Q64YI8_39-173_PF03734.4 Length = 135 Score = 84.5 bits (208), Expect = 1e-15 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 18/135 (13%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ----- 71 + I K+E KL L K Q + + I G K ++GD ++PEG + + Sbjct: 6 LLISKDEMKLRLIDYK----GQELFTADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 60 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQI 123 + I + N + R K + IHG + GC + ++++ Sbjct: 61 SKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSEL 120 Query: 124 DEIFAFVRDAFVGGQ 138 +++ + +R Sbjct: 121 EQLVSLIRVPTTVII 135 >ErfK_YbiS_YhnG_Q98PA3_31-163_PF03734.4 Length = 133 Score = 84.5 bits (208), Expect = 1e-15 Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 17/132 (12%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFYSVQP 72 I + K R + + + + +P S G + ++P Y + Sbjct: 5 IEVDKGARLVRVLDPS----GKWLAVFPASIGSAEKPAPSGEAEVKRVVRNPTYHYDPRF 60 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAMTDAQID 124 ++ I G N IHG S GC +T+ + Sbjct: 61 AFKGVKAKRPFTIAAGPNNPVVWIDLSIES-YGIHGTPEPGKIGTTFSHGCIRLTNWDAE 119 Query: 125 EIFAFVRDAFVG 136 ++ + V+ Sbjct: 120 DLASMVQKGTKV 131 >gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methylococcus capsulatus str. Bath] Length = 177 Score = 84.5 bits (208), Expect = 1e-15 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 47/174 (27%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREGDFQSP 64 Q ++ + + L++ + ++ + I G G +R D ++P Sbjct: 11 PAAQSENPDPWLLVETKPHVLKVMQGD-----TPVEVFTKIAIGQHGAGVDKRRNDNKTP 65 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGY------------------------- 99 G Y + N +S+++ + +PN G+ Sbjct: 66 LGEYRIGWI--NENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQ 123 Query: 100 ---TGKYLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 G + IHG + GC A+T+ QID++ +VR + Sbjct: 124 DTPLGGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTLVVIR 177 >gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 215 Score = 84.1 bits (207), Expect = 2e-15 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 17/127 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ + ++ +P+ S +G + G + P Y Sbjct: 79 KPAKLVVDKSDSTLRLFD----ADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVFKY 134 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + + G N R + + +HG S GC +T Sbjct: 135 NPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 194 Query: 120 DAQIDEI 126 + + + Sbjct: 195 NWDVVAL 201 >gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitrosomonas europaea ATCC 19718] Length = 182 Score = 84.1 bits (207), Expect = 2e-15 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 45/170 (26%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 S ++I I E++L + + + I G R +GD Q+P G + Sbjct: 19 SYANSDIWILIDTLEQRLSVMRGDKAQ----LAFNNIAIGRYGASSSRMKGDNQTPLGSF 74 Query: 69 SVQPNQLNPDSRYYLAINIGFPN----AYDRAHGYTGKYLMI------------------ 106 + + + RYY + FPN A + + Sbjct: 75 QISWIKQHH--RYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPL 132 Query: 107 ----------------HGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 H + GC A+T+AQIDE+ ++++ Sbjct: 133 GGYIGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTKVVIR 182 >gi|7380643|emb|CAB85233.1| hypothetical protein [Neisseria meningitidis Z2491] Length = 358 Score = 84.1 bits (207), Expect = 2e-15 Identities = 24/147 (16%), Positives = 37/147 (25%), Gaps = 36/147 (24%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +++L L+ + +L K YP+ Q+ G + + N Sbjct: 49 VFINIPQQRLFLY-----TDGKLTKVYPVAVGRAMT---------QTNLGEHKIGAKAYN 94 Query: 77 PDSRYYLAI-----------NIGFPNAYDRAHGYTGK---YLMIHGACV--------SVG 114 P +I G N G L IHG S G Sbjct: 95 PVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHG 154 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPSV 141 C M E + Sbjct: 155 CVRMKSPDALEFAKTIASGSPASVIYQ 181 >gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesorhizobium loti MAFF303099] Length = 376 Score = 84.1 bits (207), Expect = 2e-15 Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + K E ++ + + L+ ++P S + SP G ++V+ Sbjct: 240 GKAVRVEVDKAEGQVRAY----AEDGSLLAAFPATIGSE---------ENPSPSGMHTVR 286 Query: 72 PNQLNPDSRYY-------------LAINIGFPNAYDRAHG-YTGKYLMIHGAC------- 110 NP Y L + G + IHG Sbjct: 287 AVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEPSFGIHGTPEPARIDK 346 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ + Sbjct: 347 TGSHGCVRLTNWDAGELGKLLSPGVPVQF 375 >gi|23465720|ref|NP_696323.1| hypothetical protein BL1154 [Bifidobacterium longum NCC2705] Length = 557 Score = 84.1 bits (207), Expect = 2e-15 Identities = 16/151 (10%), Positives = 33/151 (21%), Gaps = 31/151 (20%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 ++ + + ++ ++K + I +G S G Sbjct: 398 NFDTANGDKWVHVDLTNQTATAYQG-----TTVVKKFNIASGKP-----TADGSMLSDTG 447 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------------- 111 + V + + G+ Y +HG Sbjct: 448 TFYVYLKYESQTM-----VGEGYNQPGTPWVSYYNGGEALHGVPAYMWGEHPIYVQQGIP 502 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC M A ++ F Sbjct: 503 GSHGCINMQVADAKWMYDFATIGTRVVVDGT 533 >gi|67675670|ref|ZP_00472425.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 84.1 bits (207), Expect = 2e-15 Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 47/175 (26%) Query: 6 LKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREGDFQSP 64 +++ I E L++++ I+ + P+ GG R++G +P Sbjct: 23 PSAMAADDEIWVLIDDREATLDIYRGDTR-----IERFEPVSLGRGGTARVRKQGSNMTP 77 Query: 65 EGFYSVQPNQLNPDSRYYLAINIGFP----------------------------NAYDRA 96 G + + N +S++ + + + +P N Sbjct: 78 TGEFHINRI--NRESKFNIFLGLDYPKLETAREAMRAGLMSPAEYADFQDAYYRNGAPPQ 135 Query: 97 HGYTGKYLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 G Y+ IHG + GC A+T+ QI+E+ V Sbjct: 136 DTVLGGYIGIHGLGASDPDIHRRFHWTEGCVAVTNPQIEELTRLVSIGTRVVIRG 190 >gi|4539222|emb|CAB39880.1| putative secreted protein [Streptomyces coelicolor A3(2)] Length = 424 Score = 83.7 bits (206), Expect = 2e-15 Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 29/151 (19%) Query: 5 ELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSP 64 + + V L +++ + + I+ P+ G ++ Sbjct: 239 KPLKITTDDRVVAVTDAAAHTLTVYQ-----DGEAIREIPVTTGKPGF---------ETR 284 Query: 65 EGFYSVQPNQ---LNPDSRYYLAINIG--FPNAYDRAHGYTGKYLMIHGACVS------- 112 G V + S +A + A T +H A S Sbjct: 285 NGVKVVLGKESFVRMRSSTVGIAEGSSEAYDLPVYWATRVTWSGEYVHAAPWSVGSQGIA 344 Query: 113 ---VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC M+ + F V++ + + Sbjct: 345 NVSHGCVGMSTDSAEWFFNTVQEGDLVEVVN 375 >gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5] Length = 397 Score = 83.7 bits (206), Expect = 3e-15 Identities = 44/225 (19%), Positives = 79/225 (35%), Gaps = 48/225 (21%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 + + + P + + K + L ++K K +L YP+ +G K REGD + Sbjct: 126 APPVLVENPENHYVFLVEKMSQYLFVFKGK-----KLEGMYPVTTGMN-IGDKEREGDGK 179 Query: 63 SPEGFYSVQPNQLNPDS---RYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------- 110 +PEG Y +A+ + +PN YD+ G TG + +HG+ Sbjct: 180 TPEGVYYFTRFIPPEQLSEIYGGIAVALNYPNPYDKLLGKTGSGIWLHGSNEKDRDKLPF 239 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIY---PFRMTDAN-----------MQ 156 + GC + V + + IY P + N + Sbjct: 240 STRGCVVAQTDVLKT--EIVP---KINLSNTLIGIYKVIPQSLEVENVKEFILSWKNAWE 294 Query: 157 RHRNSPNYDFWKQ--------LKPGYDYFEQT---RKPPTVSVCN 190 + + F+ + LK DY ++T +K V + N Sbjct: 295 KKDLNRFISFYSKHFRWKGGGLKEWKDYKKRTILSKKFIKVDISN 339 >ErfK_YbiS_YhnG_Q83BU9_47-172_PF03734.4 Length = 126 Score = 83.4 bits (205), Expect = 3e-15 Identities = 22/132 (16%), Positives = 39/132 (29%), Gaps = 17/132 (12%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + ++ +LIK + G PK + ++P G + + Sbjct: 4 RLFVFDPKRHRWYAYQN-----GRLIKQGRASGGAYGC-PKNKSRSCRTPSGTFRIIRKG 57 Query: 75 L-NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEI- 126 N S Y + G A + IHG S GC +T A + Sbjct: 58 PPNCKSTRYPKPHGG---ARMDYCMCYHAFYCIHGSDHVPNYHASHGCIRVTPADARWLS 114 Query: 127 FAFVRDAFVGGQ 138 F++ Sbjct: 115 HNFIQYGTKVVV 126 >gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1] Length = 167 Score = 83.4 bits (205), Expect = 3e-15 Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 49/166 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G + G +P G++ + Sbjct: 9 ILVDLETQRLYL--------PKHQKCYSISSGKNGIGEQENTGK--TPRGWHQIAEKIGA 58 Query: 74 ---------QLNPDSRYYLAI-------------------NIGFPNAYDRAHGYTGKYLM 105 P Y ++ + + +Y+ Sbjct: 59 TALENTVFIGRKPTGELYNSVLAEQFPERDWILSRILWLDGLQPDFNQGQGCDTKQRYIY 118 Query: 106 IHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 IHG S GC M + + E+F V + + ++ Sbjct: 119 IHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPEYALVYLSEQRL 164 >ErfK_YbiS_YhnG_Q89T02_56-167_PF03734.4 Length = 112 Score = 83.4 bits (205), Expect = 3e-15 Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 27/133 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G P+ + + +++ + A I P+ + G ++P G +++ Sbjct: 1 GEPIMAIVSIKSQQVTFYDADGW-----ILRAPVSTGTTG---------RETPAGVFAIV 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGAC-----VSVGCYAMTDAQIDE 125 + S + +A+ T + +HG S GC M + Sbjct: 47 EKDKDHHSTM-------YDDAWMPNMQRITWNGIALHGGPLPGYAASHGCVRMPFGFAEG 99 Query: 126 IFAFVRDAFVGGQ 138 +F Sbjct: 100 LFDKTNIGMRVII 112 >ErfK_YbiS_YhnG_Q7V8E9_47-190_PF03734.4 Length = 144 Score = 83.4 bits (205), Expect = 3e-15 Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 45/153 (29%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + R+L + + + LIKS+ + G ++P G + V + Sbjct: 6 LVLDRRSRRLLVLE-----DGSLIKSFSVAVGMPGW---------ETPTGEFQVLSKTPH 51 Query: 77 PDSRYYLA---INIGFPNAYDRAHGYTGKY--------------------LMIHGAC--- 110 P + + I G N + HG Sbjct: 52 PIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRW 111 Query: 111 -----VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 VS GC + + I ++ V+ Sbjct: 112 TVGRAVSHGCVRLFEEDIQSLYRLVKIGTPLKV 144 >gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [Brucella abortus biovar 1 str. 9-941] Length = 408 Score = 83.4 bits (205), Expect = 3e-15 Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 35/150 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K +++ + +L+ +YP S D SP G V+ Sbjct: 272 KVARIIADKGRKQVRGYDEN----GKLVVAYPSTIGSS---------DNPSPSGIVQVER 318 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 +NP+ Y L I G + IHG Sbjct: 319 IAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGIHGTPAPSRIGKI 378 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC +T+ +E+ V+ Sbjct: 379 SSHGCVRLTNWDAEELAKLVKPGVTVEFTE 408 >ErfK_YbiS_YhnG_Q5WH69_27-153_PF03734.4 Length = 127 Score = 83.0 bits (204), Expect = 4e-15 Identities = 20/136 (14%), Positives = 36/136 (26%), Gaps = 28/136 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + L L +A E P+ G ++P G ++V Sbjct: 6 VIVNVRTNTLALIEANHIAEIH-----PVATGKKG---------DETPLGQFTVLVKVEQ 51 Query: 77 PDSRYYLAINIGFPNAYDRAH------GYTGKYLMIHGAC--------VSVGCYAMTDAQ 122 P R N G G+ +HG S GC + + Sbjct: 52 PYYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPGSIGYSASAGCIRLANPT 111 Query: 123 IDEIFAFVRDAFVGGQ 138 I+ ++ + Sbjct: 112 IERLYQKIDIGSKIFI 127 >gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clostridium tetani E88] Length = 510 Score = 83.0 bits (204), Expect = 4e-15 Identities = 17/137 (12%), Positives = 37/137 (27%), Gaps = 23/137 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P + I + +K+ +++ +LIKS+ G + +G + + Sbjct: 387 PNNTYSILVSLANQKVYIYENN-----RLIKSFICSTGMRGT---------PTIKGRFLI 432 Query: 71 QPNQ----LNPDSRYYLAINIGFPNAYDRAHGYTGK-----YLMIHGACVSVGCYAMTDA 121 Y I + + G S GC + D Sbjct: 433 GGRGASFGQEHGYICYNFIRFNYDYLFHSVLHNLDGSIIQSEYNKLGTQASHGCVRLKDE 492 Query: 122 QIDEIFAFVRDAFVGGQ 138 I ++ + + Sbjct: 493 DIKWMYNNIPRNTLVVI 509 >gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protein [Helicobacter pylori 26695] Length = 330 Score = 82.6 bits (203), Expect = 5e-15 Identities = 31/181 (17%), Positives = 52/181 (28%), Gaps = 24/181 (13%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 K + LE ++ + + I S S G K EGD +P G Y Sbjct: 64 YQNKQFLFVANKSKPSLEFYEIENN-MLKKINSSKALVGSK-KGDKTLEGDLATPIGVYR 121 Query: 70 VQPN-QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTD 120 + + LA +PN YD TG + +HG + GC A+ + Sbjct: 122 ITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIEN 181 Query: 121 AQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTD------------ANMQRHRNSPNYDFWK 168 + + V + + +P + R F+ Sbjct: 182 PLLSS-YDKVLKGEKAFLITYEDKFFPSTKEELSMILSSLFQWKEAWARGDFERYMRFYN 240 Query: 169 Q 169 Sbjct: 241 P 241 >ErfK_YbiS_YhnG_Q9I5J7_55-167_PF03734.4 Length = 113 Score = 82.6 bits (203), Expect = 5e-15 Identities = 17/126 (13%), Positives = 38/126 (30%), Gaps = 15/126 (11%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 PV I + E+K +++ I + G ++P G +S+ Sbjct: 3 PVTIVVSLTEQKAYIYRN-----GIAIGVSTLSSGKKG---------RETPTGVFSILQK 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVGCYAMTDAQIDEIFAFVRDA 133 ++ S Y + + + + G S GC + A +++ + Sbjct: 49 SVDHKSDLYNSAPMPYMQRLTWDGIALHAG-NLPGYPASHGCIRLPMAFAKKLYGITGFS 107 Query: 134 FVGGQP 139 Sbjct: 108 STTVII 113 >ErfK_YbiS_YhnG_Q899Q5_388-509_PF03734.4 Length = 122 Score = 82.6 bits (203), Expect = 5e-15 Identities = 16/133 (12%), Positives = 35/133 (26%), Gaps = 23/133 (17%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 I + +K+ +++ +LIKS+ G + +G + + Sbjct: 4 YSILVSLANQKVYIYENN-----RLIKSFICSTGMRGT---------PTIKGRFLIGGRG 49 Query: 75 ----LNPDSRYYLAINIGFPNAYDRAHGYTGK-----YLMIHGACVSVGCYAMTDAQIDE 125 Y I + + G S GC + D I Sbjct: 50 ASFGQEHGYICYNFIRFNYDYLFHSVLHNLDGSIIQSEYNKLGTQASHGCVRLKDEDIKW 109 Query: 126 IFAFVRDAFVGGQ 138 ++ + + Sbjct: 110 MYNNIPRNTLVVI 122 >ErfK_YbiS_YhnG_Q92US7_190-325_PF03734.4 Length = 136 Score = 82.6 bits (203), Expect = 6e-15 Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 17/140 (12%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGG----LGPKRREGDFQSPEGF 67 G I + K ++ + + + +YP S G G + +G + P Sbjct: 1 GEVKRIEVRKRAGQVLAF----AEDGSPLAAYPASIGSEGSPSPTGTHKVKGVARMPPYE 56 Query: 68 YSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAM 118 Y N D+ L + G N T IHG S GC + Sbjct: 57 YDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDLTEPTYGIHGTPEPSLIDKAQSHGCVRL 116 Query: 119 TDAQIDEIFAFVRDAFVGGQ 138 T+ +E+ A V+ V Sbjct: 117 TNWDAEELAAMVKPGVVAEF 136 >ErfK_YbiS_YhnG_Q92K34_317-452_PF03734.4 Length = 136 Score = 82.6 bits (203), Expect = 6e-15 Identities = 27/149 (18%), Positives = 39/149 (26%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + +LI +YP S D SP G V+ Sbjct: 1 GKVARIVADKARKQVLAYD----EAGKLIAAYPSTIGSS---------DTPSPSGTVHVE 47 Query: 72 PNQLNPDSRYYLAIN-------------IGFPNAYDRAH-GYTGKYLMIHGACV------ 111 +P Y IN G + IHG Sbjct: 48 RIAFDPGYTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 107 Query: 112 --SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ V Sbjct: 108 TQSHGCVRLTNWDATELGKMVSTGVTVEF 136 >gi|29654445|ref|NP_820137.1| enhanced entry protein EnhA, putative [Coxiella burnetii RSA 493] Length = 248 Score = 82.6 bits (203), Expect = 6e-15 Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 12/131 (9%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAY 93 E QLIK PI R ++ G + V P + + A Sbjct: 123 DPEGQLIKWGPISSGKNYCRDVNRSC--ETITGIFYVFHK-KGPGCKSNVFPVETSGGAV 179 Query: 94 DRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEIF-AFVRDAFVGGQPSVQVSIY 146 + K +HG+ S GC + + FV A G +V + Sbjct: 180 MPYCMFFFKGYALHGSNEVTGYRDSHGCVRLFKRDAKWLNENFVNVATKDGHLGTKVVVE 239 Query: 147 PFRMTDANMQR 157 ++T N R Sbjct: 240 --KLTMENSGR 248 >ErfK_YbiS_YhnG_Q606Y7_79-237_PF03734.4 Length = 159 Score = 82.2 bits (202), Expect = 7e-15 Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 46/163 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++LEL +A +++ Y + G+G KR G +P G++ V+ Sbjct: 4 DFLHISVPRQRLELIEA-----GKVVAHYRVSTAKNGVGEKR--GSECTPRGWHRVRAKI 56 Query: 74 -----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKY 103 P Y + D +Y Sbjct: 57 GAGLPAGAVLVGRRPTGEIYTPLLAARHPGRDWILSRILWLGGLQPGFNRYGEVDTAWRY 116 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG+ S GC +T A + ++F V + Sbjct: 117 IYIHGSPDDGVDGTPQSHGCIRLTSADVIDLFDRVPVGALVYV 159 >ErfK_YbiS_YhnG_Q8PH92_78-212_PF03734.4 Length = 135 Score = 82.2 bits (202), Expect = 7e-15 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 17/127 (13%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 P + + K + L L+ + ++ +P+ S +G + G + P Y Sbjct: 2 KPAKLVVDKSDSTLRLFD----ADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVFKY 57 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYAMT 119 + + + G N R + + +HG S GC +T Sbjct: 58 NPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPHYGLHGTPEPGHVGKTESHGCVRLT 117 Query: 120 DAQIDEI 126 + + + Sbjct: 118 NWDVVAL 124 >gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] Length = 316 Score = 82.2 bits (202), Expect = 7e-15 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 15/140 (10%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 + ++ K ++ L+++ G + + + +G K +EGD ++P GFY Sbjct: 52 YTQDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEVITGL--MGDKEKEGDLKTPVGFYE 109 Query: 70 VQPNQLNPDSRYYL--AINIGFPNAYDRAHGYTGKYLMIHGACV---------SVGCYAM 118 + NP +YY A +PN D+ TG + IHG + + GC A+ Sbjct: 110 LGMKF-NPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCIAL 168 Query: 119 TDAQIDEIFAFVRDAFVGGQ 138 + ++++ V Sbjct: 169 FNDKLEDFAKIV-AGKKVYV 187 >ErfK_YbiS_YhnG_Q6FE10_4-159_PF03734.4 Length = 156 Score = 82.2 bits (202), Expect = 8e-15 Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 49/159 (30%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN--- 73 I + E ++L L + K Y I G+G + G +P G++ + Sbjct: 6 ILVDLETQRLYL--------PKHQKCYSISSGKNGIGEQENTGK--TPRGWHQIAEKIGA 55 Query: 74 ---------QLNPDSRYYLAI-------------------NIGFPNAYDRAHGYTGKYLM 105 P Y ++ + + +Y+ Sbjct: 56 TALENTVFIGRKPTGELYNSVLAEQFPERDWILSRILWLDGLQPDFNQGQGCDTKQRYIY 115 Query: 106 IHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVG 136 IHG S GC M + + E+F V + + Sbjct: 116 IHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPEYALV 154 >ErfK_YbiS_YhnG_Q8UDJ2_335-470_PF03734.4 Length = 136 Score = 81.8 bits (201), Expect = 8e-15 Identities = 31/149 (20%), Positives = 44/149 (29%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G I K +++ + G + LI +YP S D SP G ++V+ Sbjct: 1 GQVARIVAHKGIKQVFAY----GQDGNLIAAYPATIGS---------TDTPSPSGTHTVE 47 Query: 72 PNQLNPDSRYYLAI-------------NIGFPNAYDRAH-GYTGKYLMIHGAC------- 110 LNP Y I G + IHG Sbjct: 48 RIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGK 107 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ VR V Sbjct: 108 TNSHGCIRLTNWDATELAKMVRPGVVVEF 136 >ErfK_YbiS_YhnG_Q8XPD9_262-385_PF03734.4 Length = 124 Score = 81.8 bits (201), Expect = 9e-15 Identities = 17/140 (12%), Positives = 40/140 (28%), Gaps = 34/140 (24%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ 74 + + E+K +++ ++ L K++ G ++P G ++VQ Sbjct: 3 YLVFVNIAEQKTYVYEGSKN-DWTLDKTFTCSTGIEGK---------ETPVGVFTVQNRA 52 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH----------------GACVSVGCYAM 118 S Y + + + H G S GC + Sbjct: 53 PWFFSPKYGQGG--------KYYVQFMGNYLFHSIPFDSDKTTVSDPTLGVPSSHGCIRL 104 Query: 119 TDAQIDEIFAFVRDAFVGGQ 138 + ++ V++ Sbjct: 105 SVEDSKWLYDNVQNGSKIII 124 >ErfK_YbiS_YhnG_Q89M18_213-348_PF03734.4 Length = 136 Score = 81.8 bits (201), Expect = 9e-15 Identities = 23/137 (16%), Positives = 38/137 (27%), Gaps = 17/137 (12%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEGFY 68 + + K + ++L+ LI YP S G + ++P Y Sbjct: 2 KADRVEVDKVRQTVKLFDKSN----ALIGFYPATVGSEDKPSPSGTLKVTEVSKNPLYRY 57 Query: 69 SVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGK-YLMIHGACV--------SVGCYAMT 119 + + SR I G N IHG S GC +T Sbjct: 58 NPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAEGYGIHGTPSPDKISKAESHGCVRLT 117 Query: 120 DAQIDEIFAFVRDAFVG 136 + + + V Sbjct: 118 NWDAERVAGSVAKGTPV 134 >gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426] Length = 165 Score = 81.4 bits (200), Expect = 1e-14 Identities = 25/134 (18%), Positives = 40/134 (29%), Gaps = 33/134 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I R+L L + I++YPI +P G + + Sbjct: 56 PYTIHISISRRQLTL-----KHRGRTIRTYPIGVGKM---------VTATPVGDFVIVNR 101 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + + IHG VS GC M + + E Sbjct: 102 QPNPGGPFGA-----------MWLSLSKVHYGIHGTNDPSSIGKYVSKGCIRMHNKDVLE 150 Query: 126 IFAFVRDAFVGGQP 139 + + V + Sbjct: 151 LASIVPNGTEVFIR 164 >gi|54025398|ref|YP_119640.1| hypothetical protein nfa34280 [Nocardia farcinica IFM 10152] Length = 253 Score = 81.4 bits (200), Expect = 1e-14 Identities = 16/134 (11%), Positives = 32/134 (23%), Gaps = 29/134 (21%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-PD 78 + Q++++ P G ++P G + V + Sbjct: 132 DLSAHTFTV-----SIGGQVVRTMPASMGKPGF---------ETPTGTFPVLEKFRSIVF 177 Query: 79 SRYYLAINIGFPNAY---DRAHGY-TGKYLMIHGACVS----------VGCYAMTDAQID 124 + I + P Y T + +H A S GC ++ Sbjct: 178 DSRTIGIPLSSPEGYLIDGEYAVRLTWGGVFVHSAPWSVDSQGYANVSHGCINLSPDDAA 237 Query: 125 EIFAFVRDAFVGGQ 138 + V Sbjct: 238 WYYNTVGIGDPVYI 251 >gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 160 Score = 81.4 bits (200), Expect = 1e-14 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 47/165 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 +++ + + + + YP+ G+G G +Q+P G + ++ Sbjct: 2 KLQVSVARQLMSVIDD----AGTTLHEYPVSTALAGVG--EVSGSYQTPRGRHIIRAKIG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 + P + + FP+ D +Y Sbjct: 56 GGLPENAVFVRRRPTGEIWTPELGEQFPD-RDWILTRILWLSGCEPGCNRLGCVDTMRRY 114 Query: 104 LMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + IHG + S GC M +A I E+F V Sbjct: 115 IYIHGCPDSSEIGSPGSHGCIRMRNADIVELFDLVPCYTEVEITE 159 >ErfK_YbiS_YhnG_Q97FU5_105-228_PF03734.4 Length = 124 Score = 81.4 bits (200), Expect = 1e-14 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 23/137 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 P+ I + E++++ ++ AK +L+ S+ G + +P+G Y+++ Sbjct: 1 EKPLRIDVDLEKQRVNIYDAKS----RLVNSFVCSSGMNG---------YDTPKGEYTIK 47 Query: 72 PN-------QLNPDSRYYLAINIGF---PNAYDRAHGYTGKYLMIHGACVSVGCYAMTDA 121 + N + Y++ + +D+ + G S GC + Sbjct: 48 ERGYSFYSQKYNEGAYYWVQFMGNYLFHSVPFDKNKNIEPNEVNKLGNKASHGCIRLPID 107 Query: 122 QIDEIFAFVRDAFVGGQ 138 I+ + + Sbjct: 108 NAKWIYDNIPRGTLVNI 124 >gi|54027613|ref|YP_121855.1| hypothetical protein nfa56390 [Nocardia farcinica IFM 10152] Length = 326 Score = 81.4 bits (200), Expect = 1e-14 Identities = 15/121 (12%), Positives = 31/121 (25%), Gaps = 24/121 (19%) Query: 36 EYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-----PDSRYYLAINIGFP 90 +++K+ P G ++P G Y V + G+ Sbjct: 200 NGEVVKTMPTSLGKPG---------HETPNGTYIVGERHRQMVMDSSTYGVPIDAPEGYK 250 Query: 91 NAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + A + + +H A S GC ++ F + + Sbjct: 251 LDVEYATRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKGDPVIVQN 310 Query: 141 V 141 Sbjct: 311 T 311 >ErfK_YbiS_YhnG_Q8FYK9_271-406_PF03734.4 Length = 136 Score = 81.4 bits (200), Expect = 1e-14 Identities = 26/148 (17%), Positives = 42/148 (28%), Gaps = 35/148 (23%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 I K +++ + +L+ +YP S D SP G V+ Sbjct: 2 KVARIIADKGRKQVRGYDEN----GKLVVAYPSTIGSS---------DNPSPSGIVQVER 48 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAH-GYTGKYLMIHGACV------- 111 +NP+ Y L I G + IHG Sbjct: 49 IAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGIHGTPAPSRIGKT 108 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ +E+ V+ Sbjct: 109 SSHGCVRLTNWDAEELAKLVKPGVTVEF 136 >gi|68174074|ref|ZP_00547345.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 231 Score = 81.4 bits (200), Expect = 1e-14 Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 31/148 (20%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + +P + + + +L+++ I P+ D +P G Sbjct: 101 QVTASETPYRLVVSRSRHRLQVFSN-----GTQIAEEPVGIG---------TADTPTPGG 146 Query: 67 FYSVQP--NQLNPDSRYYL-AINIGFPNAYDRAHGYTGKY---LMIHGAC--------VS 112 + + +P+ Y A + N + + G + + +HG VS Sbjct: 147 RFYLMELLKPRDPNGPYGPYAFGL---NGFSTSLSSFGGHKPVIGVHGTNEPKLIGKDVS 203 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 GC +++ I + V + Sbjct: 204 HGCIRLSNDAITRLAQTVPLGTPIDIVA 231 >gi|34498927|ref|NP_903142.1| hypothetical protein CV3472 [Chromobacterium violaceum ATCC 12472] Length = 208 Score = 81.0 bits (199), Expect = 1e-14 Identities = 25/178 (14%), Positives = 56/178 (31%), Gaps = 51/178 (28%) Query: 5 ELKQQLPGSPV----YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 L+ P + ++ + + + L L ++ K + + G+G G Sbjct: 34 PLQATHPNARHYGAPWVWVGVKSQTLRLLDD----WGRIQKEFTVSTAKNGVGET--SGS 87 Query: 61 FQSPEGFY-------------SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-------- 99 +Q+P G++ ++ + +Y +++ +PN D Sbjct: 88 YQTPRGWHAVCEKLGAGAEANTIIFRRQVTPWKYTPELHVQYPNK-DWILTRILWLCGQE 146 Query: 100 -----------TGKYLMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + + IHG S+GC M + + E+F V + Sbjct: 147 PGLNQGGNVDSYDRAIYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNGTDVWI 204 >ErfK_YbiS_YhnG_Q5YU65_123-251_PF03734.4 Length = 129 Score = 81.0 bits (199), Expect = 2e-14 Identities = 16/134 (11%), Positives = 32/134 (23%), Gaps = 29/134 (21%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-PD 78 + Q++++ P G ++P G + V + Sbjct: 10 DLSAHTFTV-----SIGGQVVRTMPASMGKPGF---------ETPTGTFPVLEKFRSIVF 55 Query: 79 SRYYLAINIGFPNAY---DRAHGY-TGKYLMIHGACVS----------VGCYAMTDAQID 124 + I + P Y T + +H A S GC ++ Sbjct: 56 DSRTIGIPLSSPEGYLIDGEYAVRLTWGGVFVHSAPWSVDSQGYANVSHGCINLSPDDAA 115 Query: 125 EIFAFVRDAFVGGQ 138 + V Sbjct: 116 WYYNTVGIGDPVYI 129 >ErfK_YbiS_YhnG_Q76HI8_279-413_PF03734.4 Length = 135 Score = 81.0 bits (199), Expect = 2e-14 Identities = 31/146 (21%), Positives = 44/146 (30%), Gaps = 34/146 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 I K ++L L+ Q+I S+P S D SP G Y V Sbjct: 1 EDIHLIIAHKGAKQLYLF----NSRNQMIASFPATIGS---------TDTPSPTGTYKVV 47 Query: 72 PNQLNPDSRY------------YLAINIGFPNAYDRAH-GYTGKYLMIHGAC-------- 110 NP Y L++ G G + K IHG Sbjct: 48 GVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNPSLISKT 107 Query: 111 VSVGCYAMTDAQIDEIFAFVRDAFVG 136 S GC +T+ +++ VR Sbjct: 108 ASHGCIRLTNWDANDLGNKVRSGVTV 133 >gi|68234377|ref|ZP_00573460.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 393 Score = 80.7 bits (198), Expect = 2e-14 Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 27/146 (18%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + +P I + + KL L+ ++I + D +P G Sbjct: 263 QVTASQTPYRIVVARGAHKLRLYSND-----KMIAEESVAIG---------TTDTPTPGG 308 Query: 67 FYSVQP--NQLNPDSRY--YLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 + + NP Y Y GF + D G + IHG VS G Sbjct: 309 RFFLMELLKPSNPGGPYGPYAFGLSGFSTSLDSFGGR-DPVIGIHGTNEPGSIGRDVSHG 367 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPS 140 C +++ I + V + Sbjct: 368 CIRLSNDAITRLAQTVPLGTPVEIIA 393 >gi|28379499|ref|NP_786391.1| cell surface protein, ErfK family [Lactobacillus plantarum WCFS1] Length = 209 Score = 80.7 bits (198), Expect = 2e-14 Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 40/154 (25%) Query: 8 QQLPG----SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 P ++I + +++L L + ++ + D ++ Sbjct: 72 VAYPNVNRYPDLWIHVSLAKQRLYLMN-----HHHVLYTMYASSGVP-------TADRKT 119 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------------ 111 P G Y VQ Y +++ G AY + H V Sbjct: 120 PRGTYHVQ--AERGKYFYSASVDEG---AYYWVSWLNHGEYLFHSTPVDAQGHFIKSDAA 174 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC ++ A ++ ++ Sbjct: 175 DLGKRPSSHGCIHLSVADSKWVYNNIKYGTKVVI 208 >ErfK_YbiS_YhnG_Q82T67_22-181_PF03734.4 Length = 160 Score = 80.7 bits (198), Expect = 2e-14 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 45/166 (27%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S ++I I E++L + + + I G R +GD Q+P G + + Sbjct: 1 NSDIWILIDTLEQRLSVMRGDKAQ----LAFNNIAIGRYGASSSRMKGDNQTPLGSFQIS 56 Query: 72 PNQLNPDSRYYLAINIGFPN----AYDRAHGYTGKYLMI--------------------- 106 + + RYY + FPN A + + Sbjct: 57 WIKQHH--RYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPLGGY 114 Query: 107 -------------HGA-CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 H + GC A+T+AQIDE+ ++++ Sbjct: 115 IGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTKVVI 160 >gi|27383268|ref|NP_774797.1| hypothetical protein bll8157 [Bradyrhizobium japonicum USDA 110] Length = 147 Score = 80.7 bits (198), Expect = 2e-14 Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 32/142 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + I K +++ + + S+P+ G G +P + Q Sbjct: 29 ADLRVDIDKSSQRMSV-----RVDGAPRYSWPVSTGCSGYG---------TPSDTFHPQA 74 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 SR Y + + + IHG S GC + A Sbjct: 75 MMRRYFSRRY------YNSPM-PHAIFFHYGFAIHGTTDIYRLGGPASHGCVRLHPAHAA 127 Query: 125 EIFAFVRDAFVGGQPSVQVSIY 146 +FA V+ G + + I Sbjct: 128 ALFALVQ---REGARNTTIRIS 146 >ErfK_YbiS_YhnG_Q8FMX7_240-368_PF03734.4 Length = 129 Score = 80.3 bits (197), Expect = 2e-14 Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 30/143 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + +E++ L+++ P+ ++ +P G Y + Sbjct: 1 GDRVEAVVDDNTKTMEVYHN-----GTLLRTIPVSLGRD-------TDEWATPNGIYIIG 48 Query: 72 PNQLNPDSRYYLA-INIGFPN-----AYDRAHGYTGKYLMIHGACVS----------VGC 115 NP +G+ D A + + +H A S GC Sbjct: 49 D--RNPSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVSHGC 106 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 +T V+ + Sbjct: 107 INVTTEAAQWFQNTVKRGDIVTV 129 >ErfK_YbiS_YhnG_Q5KUS1_54-163_PF03734.4 Length = 110 Score = 80.3 bits (197), Expect = 2e-14 Identities = 25/133 (18%), Positives = 40/133 (30%), Gaps = 33/133 (24%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P I I R+L L + I++YPI +P G + + Sbjct: 3 PYTIHISISRRQLTL-----KHRGRTIRTYPIGVGKM---------VTATPVGDFVIVNR 48 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDE 125 Q NP + + + IHG VS GC M + + E Sbjct: 49 QPNPGGPFGA-----------MWLSLSKVHYGIHGTNDPSSIGKYVSKGCIRMHNKDVLE 97 Query: 126 IFAFVRDAFVGGQ 138 + + V + Sbjct: 98 LASIVPNGTEVFI 110 >gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methylococcus capsulatus str. Bath] Length = 241 Score = 80.3 bits (197), Expect = 3e-14 Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 46/163 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++LEL +A +++ Y + G+G KR G +P G++ V+ Sbjct: 82 DFLHISVPRQRLELIEA-----GKVVAHYRVSTAKNGVGEKR--GSECTPRGWHRVRAKI 134 Query: 74 -----------QLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKY 103 P Y + D +Y Sbjct: 135 GAGLPAGAVLVGRRPTGEIYTPLLAARHPGRDWILSRILWLGGLQPGFNRYGEVDTAWRY 194 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG+ S GC +T A + ++F V + Sbjct: 195 IYIHGSPDDGVDGTPQSHGCIRLTSADVIDLFDRVPVGALVYV 237 >gi|40217343|emb|CAE09094.1| putative lipoprotein Lpps [Gordonia westfalica] Length = 390 Score = 80.3 bits (197), Expect = 3e-14 Identities = 15/140 (10%), Positives = 36/140 (25%), Gaps = 29/140 (20%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + + + + ++I++ P +P G Y + + Sbjct: 237 IVADDNTKTIVV-----KRDGKVIRTMPTSFGKDST---------PTPRGIYMIGDRVEH 282 Query: 77 -----PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDA 121 + G+ A + + +HGA S GC ++ A Sbjct: 283 IIMDSSTYGVPVESAAGYRTPVQWAVQMSYSGIYMHGAPWSMSAQGNSNVSNGCPNLSPA 342 Query: 122 QIDEIFAFVRDAFVGGQPSV 141 + + + Sbjct: 343 DAEWLVKNTLRGDPVTVKNT 362 >gi|68160971|gb|AAY86917.1| lr1830 [Lactobacillus reuteri] Length = 218 Score = 79.9 bits (196), Expect = 3e-14 Identities = 15/159 (9%), Positives = 35/159 (22%), Gaps = 33/159 (20%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K +I++ + + L+ ++I + PK + Sbjct: 74 PYPDLNKV----KDFWIKVDLKNNRTYLYDGS-----KVIYTMYSTGGIYKKDPKTGKLK 124 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG------------ 108 +P G + Q + + L + + H Sbjct: 125 SVTPTGTFYAQQERGDSFFNQSLKEGANY-----YVSWKNHGEYLFHSVPTKADGKYNEQ 179 Query: 109 -------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC ++ + + Sbjct: 180 EAAKLGKTQGSHGCIRLSVPDAQWMEKNLPVGTKIEIVG 218 >gi|46190626|ref|ZP_00206527.1| COG1376: Uncharacterized protein conserved in bacteria [Bifidobacterium longum DJO10A] Length = 235 Score = 79.9 bits (196), Expect = 3e-14 Identities = 21/157 (13%), Positives = 42/157 (26%), Gaps = 43/157 (27%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K+ S + + + ++++ + K+ Y +I S + D Sbjct: 102 PTGKQPDL-SQYSDLSVEVSLAKQRVYV-KSGGQTIYTMIASTGV--------------D 145 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH------------- 107 +P G Y++ + Y +G + H Sbjct: 146 DATPHGSYTIDTRGEH---FYNAEEGMGAD-----YWVQFYGSYLFHSVPTGEAFGDYLP 197 Query: 108 ------GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G S GC + A + V D + Sbjct: 198 EEGAKLGQPASHGCVRLAVADAQWFYDQVPDGTLVTI 234 >gi|54297296|ref|YP_123665.1| hypothetical protein lpp1341 [Legionella pneumophila str. Paris] Length = 157 Score = 79.9 bits (196), Expect = 3e-14 Identities = 19/116 (16%), Positives = 31/116 (26%), Gaps = 13/116 (11%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-LNPDSRYYLAINIGFPNA 92 ++I++ RR +P G + V S Y G P Sbjct: 47 SANGKVIRTGRGSGGKHYCSDVRRSCK--TPSGVFRVISKGGPACRSSRYPLGKGGAPMP 104 Query: 93 YDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEI-FAFVRDAFVGGQPSV 141 + K IHG+ S GC + + F++ S Sbjct: 105 ---YCMFFSKLYAIHGSPDVPNYNASHGCVRVKPHDARWLSQNFIKIGTKVIIKSY 157 >gi|61101279|ref|ZP_00376735.1| hypothetical protein ELI1976 [Erythrobacter litoralis HTCC2594] Length = 425 Score = 79.5 bits (195), Expect = 4e-14 Identities = 22/142 (15%), Positives = 38/142 (26%), Gaps = 18/142 (12%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEG 66 I + K E L+ +K L+ + + S LG G+ +P Sbjct: 290 QPEVDRIVVSKSEDTLKAYKGD-----TLVAMFTVSSGSSEFPLPLGEWDIVGEAYNPPY 344 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------SVGCYAM 118 Y + Y L + ++ IHG S GC + Sbjct: 345 SYDPEVLGQGEGETYTLPPGPNGMVGVVWIDL-SKEHYGIHGTPEPETIGRAQSSGCVRL 403 Query: 119 TDAQIDEIFAFVRDAFVGGQPS 140 T+ + V + Sbjct: 404 TNWDAARLSQMVSTDTAVEFVA 425 >gi|28378135|ref|NP_785027.1| cell surface protein, ErfK family [Lactobacillus plantarum WCFS1] Length = 203 Score = 79.5 bits (195), Expect = 4e-14 Identities = 17/157 (10%), Positives = 38/157 (24%), Gaps = 42/157 (26%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K K + I++ +++++ L Q + + G Sbjct: 69 PYPKLAKY----DDINIQVSIKKQRVYL-----KNHDQTLYTMLASTGKHGSD------- 112 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV--------- 111 +P+G + +Q + + + H V Sbjct: 113 --TPKGHFEIQAERGQHFFNTQSGEGANY-----WVSFKDHGIYLFHSVPVDANDQYIVK 165 Query: 112 ----------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T A ++ + Sbjct: 166 EAQQLGKVANSHGCIRLTIADAKWLYENISTHTPVVV 202 >ErfK_YbiS_YhnG_Q9X811_245-373_PF03734.4 Length = 129 Score = 79.5 bits (195), Expect = 4e-14 Identities = 19/142 (13%), Positives = 37/142 (26%), Gaps = 29/142 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 V L +++ + + I+ P+ G ++ G V Sbjct: 2 DDRVVAVTDAAAHTLTVYQ-----DGEAIREIPVTTGKPGF---------ETRNGVKVVL 47 Query: 72 PNQ---LNPDSRYYLAINIG--FPNAYDRAHGYTGKYLMIHGACVS----------VGCY 116 + S +A + A T +H A S GC Sbjct: 48 GKESFVRMRSSTVGIAEGSSEAYDLPVYWATRVTWSGEYVHAAPWSVGSQGIANVSHGCV 107 Query: 117 AMTDAQIDEIFAFVRDAFVGGQ 138 M+ + F V++ + Sbjct: 108 GMSTDSAEWFFNTVQEGDLVEV 129 >gi|29653414|ref|NP_819106.1| enhanced entry protein EnhA, putative [Coxiella burnetii RSA 493] Length = 249 Score = 79.5 bits (195), Expect = 4e-14 Identities = 15/146 (10%), Positives = 34/146 (23%), Gaps = 17/146 (11%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 +S P + + + K QL+ P+ Sbjct: 112 LSPFPPNIHPTHQKLLVVNLGLHAFAAYDEK----GQLVHWGPVSGGQEWCSD--VGRKC 165 Query: 62 QSPEGFYSVQPNQLNP--DSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----ACVSVG 114 + G + + +++ + G P + + +HG S G Sbjct: 166 NTVVGNFRIVRLGGPECVSNKFPVETEGGAPMP---YCMFYFRGYALHGSTLPGYHASHG 222 Query: 115 CYAMTDAQIDEIFA-FVRDAFVGGQP 139 C + + F+ Sbjct: 223 CIRLFHDDAKWLNKHFLNVGTQIIVT 248 >gi|69930975|ref|ZP_00627615.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 320 Score = 79.5 bits (195), Expect = 4e-14 Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 18/139 (12%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEG 66 P + + K+ + ++L+ G LI YP S G + ++P Sbjct: 163 PKKAAKVEVDKKRQTVKLFDKSNG----LIGFYPATVGSEEKPSLSGTLKVTTVKRNPTY 218 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYA 117 Y+ SR I G N +G+ +HG S GC Sbjct: 219 HYNPAYYFGGVHSRKPFTIAPGPNNPVGTVWISLSGEGYGVHGTSSPGKVSKSESHGCIR 278 Query: 118 MTDAQIDEIFAFV-RDAFV 135 +T+ + + Sbjct: 279 LTNWDAERVAEDAGSLGTT 297 >gi|71151034|ref|ZP_00649956.1| conserved hypothetical protein [Thiomicrospira denitrificans ATCC 33889] Length = 321 Score = 79.5 bits (195), Expect = 4e-14 Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 11/131 (8%) Query: 20 FKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD- 78 K L L+ ++ K Y G K +EGD ++P G Y + Sbjct: 68 DKSLSSLNLYSLDENQNFKFKKKYSAFTGKM-KGDKIKEGDLRTPTGIYQITQKLSKETK 126 Query: 79 ---SRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------SVGCYAMTDAQIDEIFAF 129 A +PN YD G G + IHG + GC A+ ++ I+ + Sbjct: 127 LDPFYGPFAFVTSYPNVYDTYKGKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIECLNKN 186 Query: 130 VRDAFVGGQPS 140 + + + Sbjct: 187 IDISKTLLIIN 197 >gi|15828436|ref|NP_302699.1| possible secreted protein [Mycobacterium leprae TN] Length = 251 Score = 79.1 bits (194), Expect = 5e-14 Identities = 15/138 (10%), Positives = 32/138 (23%), Gaps = 29/138 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + +++++ P +P G ++ + Sbjct: 128 VASLSTHTFTV-----SRNGEVLRTMPASMGKP---------TRPTPIGKFTALSKERTV 173 Query: 78 DS-RYYLAINIGFPNAYDRAHGY----TGKYLMIHGACVS----------VGCYAMTDAQ 122 + I + P Y Y T + +H A S GC ++ Sbjct: 174 VMDSRTIGIPLNSPEGYLITAQYAVRVTWSGVYVHSAPWSVNSQGYTNVSHGCINLSPDD 233 Query: 123 IDEIFAFVRDAFVGGQPS 140 F V + Sbjct: 234 ATWYFNTVNVGDPIEVVA 251 >ErfK_YbiS_YhnG_Q5YMV0_180-308_PF03734.4 Length = 129 Score = 79.1 bits (194), Expect = 6e-14 Identities = 15/118 (12%), Positives = 30/118 (25%), Gaps = 24/118 (20%) Query: 36 EYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN-----PDSRYYLAINIGFP 90 +++K+ P G ++P G Y V + G+ Sbjct: 21 NGEVVKTMPTSLGKPG---------HETPNGTYIVGERHRQMVMDSSTYGVPIDAPEGYK 71 Query: 91 NAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + A + + +H A S GC ++ F + Sbjct: 72 LDVEYATRLSNSGIFLHAAPWSVGQQGVANVSHGCLNVSTEDARWFFENAQKGDPVIV 129 >gi|23464689|ref|NP_695292.1| protein similar to YcbI of B. subtilis [Bifidobacterium longum NCC2705] Length = 180 Score = 79.1 bits (194), Expect = 6e-14 Identities = 15/150 (10%), Positives = 38/150 (25%), Gaps = 29/150 (19%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P K+ S + +++ ++++ + + I + Sbjct: 47 PTGKQPDL-SQYSDLSVKVSIAKQEVYVQSG-----GETIYTMIASTGLNDT-------- 92 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGF----PNAYDRAHGYTGKYLM--------IHG 108 +P G Y + + + + + TG G Sbjct: 93 --TPRGNYVIGMRG-DHFYNPAEGMGADYWVRFNGPFLFHSVPTGANSGEYMEEEGNKLG 149 Query: 109 ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T A + + + + Sbjct: 150 QPASHGCVRLTVADAEWFYNQIPEGTPVTI 179 >ErfK_YbiS_YhnG_Q60B75_17-176_PF03734.4 Length = 160 Score = 79.1 bits (194), Expect = 6e-14 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 47/167 (28%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSY-PICKWSGGLGPKRREGDFQSPEGFYSV 70 ++ + + L++ + ++ + I G G +R D ++P G Y + Sbjct: 1 NPDPWLLVETKPHVLKVMQGD-----TPVEVFTKIAIGQHGAGVDKRRNDNKTPLGEYRI 55 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGY----------------------------TGK 102 N +S+++ + +PN G+ G Sbjct: 56 GWI--NENSKFHRFFGLTYPNPEIAKRGFIRGLIDEQLVRHILRAHLVEATPPQDTPLGG 113 Query: 103 YLMIHGA-----------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG + GC A+T+ QID++ +VR + Sbjct: 114 QIGIHGVGAGNRQVHEMFDWTHGCVALTNEQIDQLTPWVRKGTLVVI 160 >ErfK_YbiS_YhnG_Q83CJ3_126-250_PF03734.4 Length = 125 Score = 79.1 bits (194), Expect = 7e-14 Identities = 17/131 (12%), Positives = 34/131 (25%), Gaps = 18/131 (13%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + I E + + L+ PI + ++ G + + Sbjct: 5 LLLINLREHAFAAYDPQGN----LVHWGPISAGKDICADGE---NCETVTGKFRIFRVHG 57 Query: 76 N--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----ACVSVGCYAMTDAQIDEIFA 128 +Y + N G P + + IHG S GC + + Sbjct: 58 ENCKSGKYPIETNGGAP---MLYCMFFYRGWAIHGSTLPGYHNSHGCVRLFHEDAKWLNQ 114 Query: 129 -FVRDAFVGGQ 138 F++ Sbjct: 115 FFIKIGTTIHV 125 >ErfK_YbiS_YhnG_Q88T96_80-208_PF03734.4 Length = 129 Score = 78.7 bits (193), Expect = 7e-14 Identities = 19/146 (13%), Positives = 42/146 (28%), Gaps = 36/146 (24%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++I + +++L L + ++ + D ++P G Y VQ Sbjct: 1 YPDLWIHVSLAKQRLYLMN-----HHHVLYTMYASSGVP-------TADRKTPRGTYHVQ 48 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------S 112 + Y +++ G AY + H V S Sbjct: 49 AER--GKYFYSASVDEG---AYYWVSWLNHGEYLFHSTPVDAQGHFIKSDAADLGKRPSS 103 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC ++ A ++ ++ Sbjct: 104 HGCIHLSVADSKWVYNNIKYGTKVVI 129 >ErfK_YbiS_YhnG_Q9JT27_44-178_PF03734.4 Length = 135 Score = 78.7 bits (193), Expect = 7e-14 Identities = 24/144 (16%), Positives = 37/144 (25%), Gaps = 36/144 (25%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + I +++L L+ + +L K YP+ Q+ G + + N Sbjct: 6 VFINIPQQRLFLY-----TDGKLTKVYPVAVGRAMT---------QTNLGEHKIGAKAYN 51 Query: 77 PDSRYYLAI-----------NIGFPNAYDRAHGYTGK---YLMIHGACV--------SVG 114 P +I G N G L IHG S G Sbjct: 52 PVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHG 111 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQ 138 C M E + Sbjct: 112 CVRMKSPDALEFAKTIASGSPASV 135 >ErfK_YbiS_YhnG_Q88Z40_337-463_PF03734.4 Length = 127 Score = 78.7 bits (193), Expect = 8e-14 Identities = 17/136 (12%), Positives = 37/136 (27%), Gaps = 26/136 (19%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + KE + + ++ + +L S I G + G + + + Sbjct: 5 YVEVDKENQHMYVY-----VDGKLTVSTDIVTGKPG--------KHATTTGVWYIWNKEK 51 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N + + + IH + S GC + Sbjct: 52 NATLKGDNDDGSSYSQPVSYWMPFDDTGEGIHDSSWQTQYGGTWYKKHGSHGCVNTPPSV 111 Query: 123 IDEIFAFVRDAFVGGQ 138 + ++FA V Sbjct: 112 MKKVFAAVPVGTPVIV 127 >gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 219 Score = 78.7 bits (193), Expect = 9e-14 Identities = 19/148 (12%), Positives = 41/148 (27%), Gaps = 32/148 (21%) Query: 9 QLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY 68 P + + R++ + + + + + +P+ +P G + Sbjct: 84 ASPEISTKVVLLLGRREISVIR-----DGEKLGPWPVAIGDPRT---------PTPTGVF 129 Query: 69 SVQPNQLNPDSRYYLAI----NIGFPNAYDRAH----GYTGKYLMIHGACV--------- 111 V+ +NP + + IG + IHG Sbjct: 130 KVENKVINPQYQSTKSGRVNPAIGVASPLGDRWIGFLQSGQNQFGIHGTPWPYWVNAKAA 189 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + GC M A + ++F V Sbjct: 190 VTNGCVRMLHAHVRQLFDVVEVGTTVEI 217 >gi|28379551|ref|NP_786443.1| cell surface protein, ErfK family [Lactobacillus plantarum WCFS1] Length = 219 Score = 78.7 bits (193), Expect = 9e-14 Identities = 16/159 (10%), Positives = 38/159 (23%), Gaps = 41/159 (25%) Query: 3 SKELKQQLPG----SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRRE 58 E P + I + ++++ L +L+ + G Sbjct: 78 PSESNHPYPNVQNYPNLRIDVSVAKQRVYL-----KAGNKLLYTMLATTGKPGA------ 126 Query: 59 GDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------- 111 +P+G + +QP + L + + H V Sbjct: 127 --NATPKGDFVIQPERGLHFYNASLNEGANY-----WVSFKDHGVYLFHSVPVDASDHYI 179 Query: 112 ------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC ++ + ++ + Sbjct: 180 ASKAALLGKRSDSHGCVRLSISDAKWMYEHIPVNTPVHI 218 >gi|48870290|ref|ZP_00323015.1| COG1376: Uncharacterized protein conserved in bacteria [Pediococcus pentosaceus ATCC 25745] Length = 221 Score = 78.3 bits (192), Expect = 9e-14 Identities = 11/146 (7%), Positives = 35/146 (23%), Gaps = 38/146 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 ++++ ++++ + K +++ + S + +P G + +Q Sbjct: 94 YPKAFLKVSIAKQRVYVMNGK-----KVLYTMYASTGSH---------ESPTPTGTFKIQ 139 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------S 112 + + + + H S Sbjct: 140 AERGDFFYNPTSKEGAKY-----WVSFKDHGIYLFHTVPTDKNGKFLEDEAEQLGKEAQS 194 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC + I+ V + Sbjct: 195 HGCVRLAVPDAKWIYEKVPEGMKVEI 220 >gi|68213008|ref|ZP_00564843.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 160 Score = 78.3 bits (192), Expect = 9e-14 Identities = 28/165 (16%), Positives = 46/165 (27%), Gaps = 47/165 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 I + + L L L+K YP+ G G ++ + +P G + V+ Sbjct: 2 KIEVSIPLQILRLSDD----AGHLLKEYPVSTALNGPGEQKDS--YCTPRGRHIVRAKIG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 P + A++ P D +Y Sbjct: 56 AGQPLGAVFRGRRPTGEVWTPALHAQHPG-RDWILTRILWLSGCEPGFNRLGNVDSMQRY 114 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + IHG S GC M +A + E+F V Sbjct: 115 IYIHGTPECEPMGEAHSHGCIRMRNADVRELFDLVPVNTQVMVLD 159 >gi|34497388|ref|NP_901603.1| hypothetical protein CV1933 [Chromobacterium violaceum ATCC 12472] Length = 301 Score = 78.3 bits (192), Expect = 1e-13 Identities = 19/174 (10%), Positives = 40/174 (22%), Gaps = 46/174 (26%) Query: 2 VSKELKQQLPGSPVY------IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPK 55 V + + + + +L L++ + +L + +P+ Sbjct: 16 VPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQ-----DGKLARIFPVAVGKMLT--- 67 Query: 56 RREGDFQSPEGFYSVQPNQLNPDSRYYLAI------------------NIGFPNAYDRAH 97 Q+P G + + P +I Sbjct: 68 ------QTPTGSFDITGIYRAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRF 121 Query: 98 GYTGKYLMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQV 143 G + L HG S GC + + E+ V + Sbjct: 122 GESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELARTVSRGDAVTVAYQTI 175 >ErfK_YbiS_YhnG_Q8NMT9_240-368_PF03734.4 Length = 129 Score = 78.3 bits (192), Expect = 1e-13 Identities = 14/135 (10%), Positives = 37/135 (27%), Gaps = 26/135 (19%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----QPN 73 + + ++K +L+++ P+ +P G Y + + Sbjct: 7 VADDATKTMSVYKN-----GELLRTMPVSFGRDTSEWA-------TPNGTYIIGDRNESM 54 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQI 123 ++ + G+ A + + +H A S GC ++ Sbjct: 55 IMDSTTFGLGYEEGGYRTPVKYATQMSYSGIYVHAAPWSVGAQGSYNTSHGCINVSTENA 114 Query: 124 DEIFAFVRDAFVGGQ 138 V+ + Sbjct: 115 QWFQEAVKRGDIVTV 129 >ErfK_YbiS_YhnG_Q88X41_76-202_PF03734.4 Length = 127 Score = 78.3 bits (192), Expect = 1e-13 Identities = 14/146 (9%), Positives = 35/146 (23%), Gaps = 38/146 (26%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I++ +++++ L Q + + G +P+G + +Q Sbjct: 1 YDDINIQVSIKKQRVYL-----KNHDQTLYTMLASTGKHGSD---------TPKGHFEIQ 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------S 112 + + + H V S Sbjct: 47 AERGQHFFNTQSGEGANY-----WVSFKDHGIYLFHSVPVDANDQYIVKEAQQLGKVANS 101 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC +T A ++ + Sbjct: 102 HGCIRLTIADAKWLYENISTHTPVVV 127 >gi|69937030|ref|ZP_00631751.1| ErfK/YbiS/YcfS/YnhG [Paracoccus denitrificans PD1222] Length = 493 Score = 78.3 bits (192), Expect = 1e-13 Identities = 32/160 (20%), Positives = 45/160 (28%), Gaps = 36/160 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + I + KE R++ + AK ++ YP S D SP G + V Sbjct: 218 TVTRIIVDKETRRVAAYDAKGN----MVADYPATVGSA---------DTPSPHGNHVVDA 264 Query: 73 NQLNPDSRYY-------------LAINIGFPNAYDRAHG-YTGKYLMIHGA--------C 110 LNP Y L I G + IHG Sbjct: 265 VALNPTYTYNPHRNFKQGQNDRVLTIPPGPNGPVGNVWIDLSEPTYGIHGTATPSQLFLN 324 Query: 111 VSVGCYAMTDAQIDEIFAFVRDA-FVGGQPSVQVSIYPFR 149 S GC +T+ E+ V+ V I Sbjct: 325 QSHGCVRLTNWDAWELAHMVKPKVTTVEFLPPGVRIADVT 364 >gi|67929395|ref|ZP_00522577.1| ErfK/YbiS/YcfS/YnhG [Solibacter usitatus Ellin6076] Length = 238 Score = 78.0 bits (191), Expect = 1e-13 Identities = 21/178 (11%), Positives = 45/178 (25%), Gaps = 45/178 (25%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ +E+ + + I + + +++ +L++ P+ + Sbjct: 76 PMPREVPELSDRNKALI-VDLAAQVFGAYES-----GRLVRWGPVSTG---------DRR 120 Query: 61 FQSPEGFYSVQPNQL------NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVSVG 114 Q+P G Y + + NP N + G S G Sbjct: 121 HQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLGLHQ------YALPGRPASHG 174 Query: 115 CYAMTDAQIDEIFAF-------------VRDAFVGGQPSVQVSIYPFRMTDANMQRHR 159 C + IF + + Y F+ + R Sbjct: 175 CTRLLATDAQWIFNWGEGWSTDGDTGEPSETGTLVLIVGK----YDFK-APQPWLQPR 227 >gi|71544473|ref|ZP_00665504.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 294 Score = 78.0 bits (191), Expect = 1e-13 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 23/140 (16%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 P +I I K+ + ++ +++ IC D + G Y+V+ Sbjct: 148 PQFILISKDLHFIGWYEN-----GKMVGDSYICIGKE---------DAWTKAGLYTVKNK 193 Query: 74 QLNPDSRYYL-AINIGFPNAYDRAHGYTGKYLMIHGA-----CVSVGCYAMTDAQIDEIF 127 + SR Y A + P ++ +H S GC + ++F Sbjct: 194 DADHVSRSYRNADGVWAPMP---YALRIYDHVWVHAGDIERGNCSHGCINLPLMPARDLF 250 Query: 128 AFVRDAFVGGQPSVQVSIYP 147 + + I P Sbjct: 251 TWAKVGTPVLVVDSLRDIGP 270 >gi|29654429|ref|NP_820121.1| enhanced entry protein EnhA, putative [Coxiella burnetii RSA 493] Length = 252 Score = 78.0 bits (191), Expect = 1e-13 Identities = 20/144 (13%), Positives = 37/144 (25%), Gaps = 19/144 (13%) Query: 3 SKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQ 62 LK G + I E + + L+ PI + + Sbjct: 118 PLPLKLNTKGKK-LLLINLREHAFAAYDPQGN----LVHWGPISAGKDICADGE---NCE 169 Query: 63 SPEGFYSVQPNQLN--PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----ACVSVGC 115 + G + + +Y + N G P + + IHG S GC Sbjct: 170 TVTGKFRIFRVHGENCKSGKYPIETNGGAP---MLYCMFFYRGWAIHGSTLPGYHNSHGC 226 Query: 116 YAMTDAQIDEIFA-FVRDAFVGGQ 138 + + F++ Sbjct: 227 VRLFHEDAKWLNQFFIKIGTTIHV 250 >ErfK_YbiS_YhnG_Q9ZBE6_121-249_PF03734.4 Length = 129 Score = 77.6 bits (190), Expect = 2e-13 Identities = 15/136 (11%), Positives = 31/136 (22%), Gaps = 29/136 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + +++++ P +P G ++ + Sbjct: 8 VASLSTHTFTV-----SRNGEVLRTMPASMGKP---------TRPTPIGKFTALSKERTV 53 Query: 78 DS-RYYLAINIGFPNAYDRAHGY----TGKYLMIHGACVS----------VGCYAMTDAQ 122 + I + P Y Y T + +H A S GC ++ Sbjct: 54 VMDSRTIGIPLNSPEGYLITAQYAVRVTWSGVYVHSAPWSVNSQGYTNVSHGCINLSPDD 113 Query: 123 IDEIFAFVRDAFVGGQ 138 F V Sbjct: 114 ATWYFNTVNVGDPIEV 129 >gi|67987357|gb|EAM75155.1| ErfK/YbiS/YcfS/YnhG [Kineococcus radiotolerans SRS30216] Length = 406 Score = 77.6 bits (190), Expect = 2e-13 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 25/146 (17%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----QPNQ 74 + L + + Q++++ P+ G G G F + G + + + Sbjct: 251 VDIAAHTLTV-----TRDGQVLRTIPVTTGQSGSG-----GRFVTRSGTKVIMSLEESRE 300 Query: 75 LNPDSRYYLAINIGFPNAYDRAHGY-TGKYLMIHGACVS----------VGCYAMTDAQI 123 +N ++ + + N + T +H A S GC M+ A Sbjct: 301 MNSETTGIGQDDPDYYNVDVQYAMRLTNSGEFLHAAPWSVSSQGRANVSHGCTGMSTADA 360 Query: 124 DEIFAFVRDAFVGGQPSVQVSIYPFR 149 +F + V I P Sbjct: 361 QWMFQNSKVGDVVTYTGSDRVIEPGN 386 >ErfK_YbiS_YhnG_Q89BJ1_28-145_PF03734.4 Length = 118 Score = 77.6 bits (190), Expect = 2e-13 Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 32/141 (22%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + I K +++ + + S+P+ G G +P + Q Sbjct: 2 ADLRVDIDKSSQRMSV-----RVDGAPRYSWPVSTGCSGYG---------TPSDTFHPQA 47 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 SR Y + + + IHG S GC + A Sbjct: 48 MMRRYFSRRY------YNSPM-PHAIFFHYGFAIHGTTDIYRLGGPASHGCVRLHPAHAA 100 Query: 125 EIFAFVRDAFVGGQPSVQVSI 145 +FA V+ G + + I Sbjct: 101 ALFALVQ---REGARNTTIRI 118 >gi|15023630|gb|AAK78723.1| Secreted protein containing uncharacterized conserved protein of ErfK family [Clostridium acetobutylicum ATCC 824] Length = 466 Score = 77.6 bits (190), Expect = 2e-13 Identities = 17/153 (11%), Positives = 38/153 (24%), Gaps = 34/153 (22%) Query: 1 PVSKELKQQLPGSPV---YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 P + + + Y+ + ++ L +K L+ + Sbjct: 329 PTYSQTAASHDANDIGNTYVEVDLSKQHLWFYKN-----GSLVVQGDVVTG-------NV 376 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------ 111 + +P G Y ++ + N + G+ + + IH A Sbjct: 377 SENDATPAGVYRLKYKERNATLK-----GQGYSSPV-SYWMPFNGGIGIHDANWRSVFGG 430 Query: 112 -------SVGCYAMTDAQIDEIFAFVRDAFVGG 137 S GC +F + Sbjct: 431 EIYKTGGSHGCVNSPYDLAKTVFENIDAGTPVV 463 >gi|48848818|ref|ZP_00303063.1| COG1376: Uncharacterized protein conserved in bacteria [Novosphingobium aromaticivorans DSM 12444] Length = 337 Score = 77.2 bits (189), Expect = 2e-13 Identities = 22/142 (15%), Positives = 40/142 (28%), Gaps = 17/142 (11%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSG----GLGPKRREGDFQSPEG 66 I + + L+ + A +L+ + + S LG + +P Sbjct: 199 QPKAGRIVVSEHAGTLKAFDASN----KLVALFTVTTGSEHDPLPLGNWKIYSSSFNPHF 254 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHG-YTGKYLMIHGACV--------SVGCYA 117 Y PDS+ + G + ++ IHG S GC Sbjct: 255 RYDASLFWDVPDSKGEHLLPPGPNGPVGVVWIDLSKEHYGIHGTPEPQTIGRTESHGCVR 314 Query: 118 MTDAQIDEIFAFVRDAFVGGQP 139 +T+ + V A Sbjct: 315 LTNWDAARLALMVDGATKVSFV 336 >ErfK_YbiS_YhnG_Q98P76_240-375_PF03734.4 Length = 136 Score = 77.2 bits (189), Expect = 2e-13 Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 35/149 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + K E ++ + + L+ ++P S + SP G ++V+ Sbjct: 1 GKAVRVEVDKAEGQVRAY----AEDGSLLAAFPATIGSE---------ENPSPSGMHTVR 47 Query: 72 PNQLNPDSRYY-------------LAINIGFPNAYDRAHG-YTGKYLMIHGAC------- 110 NP Y L + G + IHG Sbjct: 48 AVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEPSFGIHGTPEPARIDK 107 Query: 111 -VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC +T+ E+ + Sbjct: 108 TGSHGCVRLTNWDAGELGKLLSPGVPVQF 136 >gi|38234386|ref|NP_940153.1| Putative lipoprotein [Corynebacterium diphtheriae NCTC 13129] Length = 389 Score = 77.2 bits (189), Expect = 2e-13 Identities = 23/146 (15%), Positives = 43/146 (29%), Gaps = 32/146 (21%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + ++K Q + S P+ + +P G Y++ Sbjct: 232 GDRVEAVADDATKTMVIYKN-----GQQVNSMPVSMG---------ANKWPTPNGIYTIG 277 Query: 72 PNQLNPDS-----RYYLAIN-IGFPNAYDRAHGYTGKYLMIHGACVS----------VGC 115 NP Y LA N G+ A + + +H A S GC Sbjct: 278 DK--NPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGC 335 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPSV 141 ++ +V+ + + Sbjct: 336 INVSTDNAAWFQNYVKRGDIVRVQNT 361 >gi|42524559|ref|NP_969939.1| hypothetical protein Bd3176 [Bdellovibrio bacteriovorus HD100] Length = 271 Score = 77.2 bits (189), Expect = 2e-13 Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 27/176 (15%) Query: 14 PVYIRIFKEE-----RKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF------- 61 I I K E + + +++ +++ + + GL KR+ + Sbjct: 83 RYVIVINKAEHGRTAQTMRVYE-----YGRVVINSKVSTGREGLELKRKNKECTGAPAKS 137 Query: 62 ---QSPEGFYSVQPNQLNPDSR-----YYLAINIGFPNAYDRAHGYTGKYLMIHGACVSV 113 Q+P G+Y+ + + S AI N Y + G S Sbjct: 138 YWSQTPTGYYTPKFLSKDHHSSSWDSSMPFAIFYDVDNGLALHEVYKKYTDYLGGR-ASG 196 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSIYPFRMTDANMQRHRNSPNYDFWKQ 169 GC +E+F V++ P + P + + ++ NS + K Sbjct: 197 GCTRQDAKTAEELFNRVKETERATIPEINPDGTPV-LNEDGSVKYINSQYWTSQKT 251 >gi|16077404|ref|NP_388217.1| hypothetical protein BSU03350 [Bacillus subtilis subsp. subtilis str. 168] Length = 194 Score = 77.2 bits (189), Expect = 3e-13 Identities = 20/156 (12%), Positives = 40/156 (25%), Gaps = 37/156 (23%) Query: 4 KELKQQLP---GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 K + P V+I + +E+K + + I + I D Sbjct: 54 KPSGGEYPDIKQKHVWIDVNVKEQKAYIKEGSNT-----IYTMMISSGLDQT------KD 102 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH------------- 107 +P+G + V+P + + + H Sbjct: 103 DATPKGTFYVEPERGEWFFSEGYQEGAEY-----WVSWKNHGEFLFHSVPMTKDQKVIKT 157 Query: 108 -----GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 G VS GC +T ++ + + Sbjct: 158 EAEKLGTKVSHGCIRLTIPDAKWVYENIPEHTKVVI 193 >gi|71838162|ref|ZP_00677923.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 192 Score = 76.0 bits (186), Expect = 5e-13 Identities = 31/160 (19%), Positives = 47/160 (29%), Gaps = 22/160 (13%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL-----GPKR 56 S++ P +P I I L L++ G+ + Y + GL GP R Sbjct: 32 TSQDPAASRPAAPYIIEISISRTLLTLYERHGTGKMFPVAQYRVGSAMRGLTTYPLGPGR 91 Query: 57 REGDFQSPEGFYSVQPNQ--LNPDSRYYLAINIGFP-NAYDR------AHGYTGKYLMIH 107 P + Q A+ G P N + G IH Sbjct: 92 VTAIQFDPWWHPTAYSRQVFRERGISLPRAVPPGHPLNYMGPFKISLSHRTWKGAIYRIH 151 Query: 108 GAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQP 139 G V+ GC+ M + E+ +R V Sbjct: 152 GNNNPRRVGRRVTGGCFVMHNRDGLELARRIRVGTVVNIV 191 >gi|58337862|ref|YP_194447.1| putative cell surface protein [Lactobacillus acidophilus NCFM] Length = 229 Score = 76.0 bits (186), Expect = 5e-13 Identities = 18/143 (12%), Positives = 39/143 (27%), Gaps = 25/143 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + + +R+ + + L + ++I + G ++G +P G Y +Q Sbjct: 97 ETDLTLRVSLKGNRTYLLRK-----GKVIYTM------LSTGGIYKKGKSLTPTGTYRIQ 145 Query: 72 PNQLNPDSRYYLAINIG------FPNAYDRAH--GYTGKYLMIHG------ACVSVGCYA 117 + + Y L N Y ++ S GC Sbjct: 146 AGRGDSFFNYNLNEGANNWTSWSPDNVYLFHSVPTKGDGNYNLNEAAKLGRTQGSHGCIR 205 Query: 118 MTDAQIDEIFAFVRDAFVGGQPS 140 ++ I + D Sbjct: 206 LSIPDSKWIMDNIPDGTKVVIKD 228 >gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legionella pneumophila str. Lens] Length = 162 Score = 76.0 bits (186), Expect = 5e-13 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 48/163 (29%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV----- 70 +I I +++++ ++ LI +Y I G+G K G +P G++ + Sbjct: 7 FIFISIKKQEMNCFEKDH-----LIANYAISSGKNGVGEKINSGC--TPRGWHKIHSILG 59 Query: 71 -------QPNQLNPDSRYYL-AINIGFPNAYDRAHGY-------------------TGKY 103 Y ++ FP D +Y Sbjct: 60 IDLPINSVMVAREWTGEIYSESLATQFP-ERDWILTRIIQLDGLEPGRNKGGDVDTLYRY 118 Query: 104 LMIHGACV--------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG S GC + + I E+ A+ + Sbjct: 119 IYIHGTPDTTQLGIPGSHGCIRLNNDAIIELAAWATKNTLVYI 161 >ErfK_YbiS_YhnG_Q83CH7_105-238_PF03734.4 Length = 134 Score = 76.0 bits (186), Expect = 5e-13 Identities = 23/119 (19%), Positives = 35/119 (29%), Gaps = 10/119 (8%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAY 93 E QLIK PI R ++ G + V P + + A Sbjct: 19 DPEGQLIKWGPISSGKNYCRDVNRSC--ETITGIFYVFHK-KGPGCKSNVFPVETSGGAV 75 Query: 94 DRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEIF-AFVRDAFVGGQPSVQVSI 145 + K +HG+ S GC + + FV A G +V + Sbjct: 76 MPYCMFFFKGYALHGSNEVTGYRDSHGCVRLFKRDAKWLNENFVNVATKDGHLGTKVVV 134 >gi|38233153|ref|NP_938920.1| Putative secreted protein [Corynebacterium diphtheriae NCTC 13129] Length = 269 Score = 76.0 bits (186), Expect = 5e-13 Identities = 18/130 (13%), Positives = 36/130 (27%), Gaps = 22/130 (16%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 I +++ L + + PI G ++P+G + V Sbjct: 158 PPAARACIDLAQQRAWLQQDGRVVYGAV----PISSGRPGW---------ETPQGVFHVN 204 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC---VSVGCYAMTDAQIDEIFA 128 + SR + P Y +T + H +S GC + F Sbjct: 205 RKVKDEISREFN----NAPMPYSVY--FTNNGIAFHQDNPNVMSHGCIHLWHNDAVTFFN 258 Query: 129 FVRDAFVGGQ 138 ++ + Sbjct: 259 TLQYGDMVYV 268 >gi|54294224|ref|YP_126639.1| hypothetical protein lpl1289 [Legionella pneumophila str. Lens] Length = 248 Score = 75.6 bits (185), Expect = 6e-13 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 15/135 (11%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VS + P I + +++ + + +L+ PI +G + G Sbjct: 91 VSPFPRYIEPSGEKTIYVSQKKLAWGAYD----EDGELLWWGPISSG---VGKCKVIGGC 143 Query: 62 QSPEGFYSVQPNQL-NPDSR-YYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSV 113 +P G + + Q + S + N A + + +HG S Sbjct: 144 STPTGSFRIIRKQDIDCVSTVFPRRANGEHGGALMPYCMHFFRGYALHGSYEVPGYRASH 203 Query: 114 GCYAMTDAQIDEIFA 128 GC M + Sbjct: 204 GCVRMFIEDARWLNE 218 >ErfK_YbiS_YhnG_Q83F95_122-247_PF03734.4 Length = 126 Score = 75.6 bits (185), Expect = 6e-13 Identities = 13/131 (9%), Positives = 31/131 (23%), Gaps = 17/131 (12%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + + K QL+ P+ + G + + Sbjct: 5 LLVVNLGLHAFAAYDEK----GQLVHWGPVSGGQEWCSD--VGRKCNTVVGNFRIVRLGG 58 Query: 76 NP--DSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-----ACVSVGCYAMTDAQIDEIFA 128 +++ + G P + + +HG S GC + + Sbjct: 59 PECVSNKFPVETEGGAPMP---YCMFYFRGYALHGSTLPGYHASHGCIRLFHDDAKWLNK 115 Query: 129 -FVRDAFVGGQ 138 F+ Sbjct: 116 HFLNVGTQIIV 126 >gi|66855775|ref|ZP_00399847.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 171 Score = 75.6 bits (185), Expect = 6e-13 Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 23/143 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P I + E +L L +A +P+ S G KR EGD ++P G Y++ Sbjct: 35 PPVDALILVDTAEHRLALCEAGAAAA-----VFPVALGSAGT-EKRAEGDRRTPLGAYAL 88 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG--------------ACVSVGCY 116 P + + I IG+P A R G TG + IHG A + GC Sbjct: 89 G--TPRPSAGFGTFIPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCV 146 Query: 117 AM-TDAQIDEIFAFVRDAFVGGQ 138 A+ +D ++ + AFV G Sbjct: 147 ALGSDPEVAAVAAFVERRRPGVV 169 >ErfK_YbiS_YhnG_Q88T44_91-218_PF03734.4 Length = 128 Score = 75.6 bits (185), Expect = 7e-13 Identities = 14/146 (9%), Positives = 36/146 (24%), Gaps = 37/146 (25%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + I + ++++ L +L+ + G +P+G + +Q Sbjct: 1 YPNLRIDVSVAKQRVYL-----KAGNKLLYTMLATTGKPGA--------NATPKGDFVIQ 47 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------------S 112 P + L + + H V S Sbjct: 48 PERGLHFYNASLNEGANY-----WVSFKDHGVYLFHSVPVDASDHYIASKAALLGKRSDS 102 Query: 113 VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC ++ + ++ + Sbjct: 103 HGCVRLSISDAKWMYEHIPVNTPVHI 128 >gi|68234778|ref|ZP_00573839.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 476 Score = 75.6 bits (185), Expect = 7e-13 Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 29/138 (21%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEG-FYSVQPN 73 + +++++ QL+++ PI G GP G +V Sbjct: 302 VDAATHVMQVFQN-----GQLVRTMPISGGKPGFLTMEGPHNVLGKAPMVIMDSATVGVP 356 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQI 123 + NP+ Y A YT +H A S GC + A Sbjct: 357 KGNPEYYY---------EEVQWAVHYTSGGQYVHSAPWSVASQGRANVSHGCVNASPADA 407 Query: 124 DEIFAFVRDAFVGGQPSV 141 + F + + + Sbjct: 408 QWFYNFSQFGDIVDISNT 425 >gi|54298630|ref|YP_124999.1| enhanced entry protein EnhA [Legionella pneumophila str. Paris] Length = 240 Score = 75.3 bits (184), Expect = 8e-13 Identities = 24/154 (15%), Positives = 41/154 (26%), Gaps = 25/154 (16%) Query: 2 VSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 VS + + I + +E+ + + L+ PI S + Sbjct: 87 VSPFPLKIQSENEKQIIVDQEKLAWGAYD----AQGNLVWWGPISSGSDKCSDSNK--VC 140 Query: 62 QSPEGFYSVQPNQ-LNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------VSVG 114 ++ G + V + + S IG A Y K +HG+ S G Sbjct: 141 RTLTGIFRVFSKENVRCTSDV---FPIGRGGAKMPYCMYFHKGFALHGSDDIPGVRASHG 197 Query: 115 CYAMTDAQIDEIF-AFVR--------DAFVGGQP 139 C M + FV Sbjct: 198 CVRMFIQDAKWLNENFVELSSERNNFMGTKVIVR 231 >gi|54023249|ref|YP_117491.1| hypothetical protein nfa12820 [Nocardia farcinica IFM 10152] Length = 404 Score = 75.3 bits (184), Expect = 8e-13 Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 24/122 (19%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN---PDSRYYLAINI--GF 89 Q+I++ P + G Y V S Y +A+N G+ Sbjct: 263 QNGQVIRTMPTSMGKDST---------PTDNGIYIVADKHEKIIMDSSTYGVAVNSPDGY 313 Query: 90 PNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQP 139 D A + + H A S GC ++ A ++ F + + Sbjct: 314 RTPVDFATRISYSGIFFHSAPWSVGAQGNSNTSHGCLNLSPANAQWVYNFAKRGDITIIK 373 Query: 140 SV 141 + Sbjct: 374 NT 375 >gi|52857863|ref|ZP_00341701.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Lactobacillus gasseri] Length = 410 Score = 75.3 bits (184), Expect = 8e-13 Identities = 19/156 (12%), Positives = 38/156 (24%), Gaps = 35/156 (22%) Query: 4 KELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQS 63 KE ++IR+ +E + + K + I + G + + Sbjct: 270 KEQPDLTKVKDLWIRVSLKENRTYIMSGK-----KPIYTM------LSTGGVYHKNKSDT 318 Query: 64 PEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------------- 110 P G Y +Q + + L + + H Sbjct: 319 PTGTYHIQHERGAAFYNHKLNEGAKY-----YVSWKDHGVYLFHSVPTKSDGSIDKKEAK 373 Query: 111 ------VSVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 S GC ++ + A V + Sbjct: 374 KLGKIPGSHGCIRLSIPDSKWLAATVPAGTKVVIKN 409 >gi|71546161|ref|ZP_00667002.1| ErfK/YbiS/YcfS/YnhG [Syntrophobacter fumaroxidans MPOB] Length = 268 Score = 75.3 bits (184), Expect = 9e-13 Identities = 21/145 (14%), Positives = 39/145 (26%), Gaps = 22/145 (15%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ + L + P I + + L ++ L C + Sbjct: 123 PMPRFLP-RFADIPRLIVVVRSIPFLGWYEMGHMAGDAL-----ACIGTKA--------- 167 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS-----VGC 115 + GFY V + SR Y A+ + IH VS GC Sbjct: 168 EPTERGFYKVLEKDPDHYSRSYSNDFGEP--AWMPWALRVYDTVWIHAGDVSNAYCSHGC 225 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQPS 140 + + +++ + Sbjct: 226 VILPPKRAQDLYEWADKGTPVVIVD 250 >gi|67916554|ref|ZP_00510260.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 230 Score = 75.3 bits (184), Expect = 9e-13 Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 39/151 (25%) Query: 1 PVSKELKQQL----PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKR 56 P + Q L PV + + ER L +++ + ++ ++Y I + Sbjct: 105 PTDLYVDQILCIPVAPPPVTVNVNVAERTLTVYR-----DGRIYRTYRIALENPA----- 154 Query: 57 REGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAH-GYTGKYLMIHGAC----- 110 P G ++V Q++P G + IHG Sbjct: 155 ----SPIPRGTFTVLNKQVDPG------------VEMGARWIGLSEAGFGIHGTNTPEFI 198 Query: 111 ---VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + M++ + E+F V + Sbjct: 199 DVVSTGNSIVMSNEDVSELFNLVPVGTIVTI 229 >gi|13471264|ref|NP_102833.1| hypothetical protein mll1184 [Mesorhizobium loti MAFF303099] Length = 143 Score = 75.3 bits (184), Expect = 1e-12 Identities = 19/136 (13%), Positives = 37/136 (27%), Gaps = 33/136 (24%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 I + + + + + + G + +P G Y Q Sbjct: 32 IDVSSQTMTV------RYGSEVYRWVVSTARPG---------YFTPRGTYRPQRTARMWY 76 Query: 79 SRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAFV 130 SR + + + IHG S GC + A +A V Sbjct: 77 SRK-------YDMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTANAATFYAMV 129 Query: 131 RDAFVGGQPSVQVSIY 146 R+ G + ++ + Sbjct: 130 RE---VGFGNTRIVVT 142 >ErfK_YbiS_YhnG_O53638_121-249_PF03734.4 Length = 129 Score = 74.9 bits (183), Expect = 1e-12 Identities = 14/136 (10%), Positives = 30/136 (22%), Gaps = 29/136 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + +++++ P +P G + + Sbjct: 8 VASISAHTFTV-----SRNGEVLRTMPASLGKP---------SRPTPIGSFHAMSKERTV 53 Query: 78 DS-RYYLAINIGFPNAYDRAHGY----TGKYLMIHGACVS----------VGCYAMTDAQ 122 + I + + Y Y T + +H A S GC ++ Sbjct: 54 VMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDN 113 Query: 123 IDEIFAFVRDAFVGGQ 138 F V Sbjct: 114 AAWYFDAVTVGDPIEV 129 >ErfK_YbiS_YhnG_Q8G566_403-530_PF03734.4 Length = 128 Score = 74.9 bits (183), Expect = 1e-12 Identities = 16/141 (11%), Positives = 33/141 (23%), Gaps = 31/141 (21%) Query: 14 PVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN 73 ++ + + ++ ++K + I +G S G + V Sbjct: 3 DKWVHVDLTNQTATAYQG-----TTVVKKFNIASGKP-----TADGSMLSDTGTFYVYLK 52 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------------SVGCYA 117 + + G+ Y +HG S GC Sbjct: 53 YESQTM-----VGEGYNQPGTPWVSYYNGGEALHGVPAYMWGEHPIYVQQGIPGSHGCIN 107 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M A ++ F Sbjct: 108 MQVADAKWMYDFATIGTRVVV 128 >gi|52857829|ref|ZP_00341684.1| COG1376: Uncharacterized protein conserved in bacteria [Lactobacillus gasseri] Length = 225 Score = 74.9 bits (183), Expect = 1e-12 Identities = 13/144 (9%), Positives = 34/144 (23%), Gaps = 35/144 (24%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 +IR+ + ++ + + + + G +P G Y+V+ + Sbjct: 97 WIRVSIKGNRVYIMDGN-----KPVYTMLASCG------VYHNGKSATPTGTYAVEAERG 145 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHG-------------------ACVSVGCY 116 L + A + + H S GC Sbjct: 146 ATFFNQSLQVG-----ARTYISWHGHGTYLFHSVPTDGNNKIMKNEAKKLGKTQASHGCI 200 Query: 117 AMTDAQIDEIFAFVRDAFVGGQPS 140 ++ ++ + Sbjct: 201 RLSIPDSKWLYEKLPVGTKVVVKD 224 >gi|71837791|ref|ZP_00677554.1| ErfK/YbiS/YcfS/YnhG [Pelobacter propionicus DSM 2379] Length = 292 Score = 74.9 bits (183), Expect = 1e-12 Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 25/139 (17%) Query: 1 PVSKELKQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGD 60 P+ K+ + I + E+ L ++ +L+ S P G Sbjct: 115 PMPKQYEPARRYDKY-ILVDLTEQWLGAYEN-----GRLVFSTPAATGKAG--------- 159 Query: 61 FQSPEGFYSVQPNQLNPDSRYYLAIN--IGFP--NAYDRAHGYTGKYLMIH-----GACV 111 ++P G + + L S Y N +P NA G G +H G Sbjct: 160 NETPTGLFRITARHLTHTSSLYKTANDEEQYPMDNAMRFHVGPDGVSYWLHARDLPGRPA 219 Query: 112 SVGCYAMTDAQI-DEIFAF 129 S GC + D ++ +F Sbjct: 220 SHGCIGLYDEEMQKRMFNN 238 >ErfK_YbiS_YhnG_Q5FIQ8_97-226_PF03734.4 Length = 130 Score = 74.9 bits (183), Expect = 1e-12 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 25/141 (17%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + + +R+ + + L + ++I + G ++G +P G Y +Q Sbjct: 1 ETDLTLRVSLKGNRTYLLRK-----GKVIYTM------LSTGGIYKKGKSLTPTGTYRIQ 49 Query: 72 PNQLNPDSRYYLAINIG------FPNAYDRAH--GYTGKYLMIHG------ACVSVGCYA 117 + + Y L N Y ++ S GC Sbjct: 50 AGRGDSFFNYNLNEGANNWTSWSPDNVYLFHSVPTKGDGNYNLNEAAKLGRTQGSHGCIR 109 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 ++ I + D Sbjct: 110 LSIPDSKWIMDNIPDGTKVVI 130 >ErfK_YbiS_YhnG_Q7NSF4_45-204_PF03734.4 Length = 160 Score = 74.9 bits (183), Expect = 1e-12 Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 47/163 (28%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFY------- 68 ++ + + + L L ++ K + + G+G G +Q+P G++ Sbjct: 5 WVWVGVKSQTLRLLDD----WGRIQKEFTVSTAKNGVGET--SGSYQTPRGWHAVCEKLG 58 Query: 69 ------SVQPNQLNPDSRYYLAINIGFPNAYDRAHGY-------------------TGKY 103 ++ + +Y +++ +PN D + Sbjct: 59 AGAEANTIIFRRQVTPWKYTPELHVQYPNK-DWILTRILWLCGQEPGLNQGGNVDSYDRA 117 Query: 104 LMIHG--------ACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG S+GC M + + E+F V + Sbjct: 118 IYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNGTDVWI 160 >ErfK_YbiS_YhnG_Q8G821_57-179_PF03734.4 Length = 123 Score = 74.5 bits (182), Expect = 1e-12 Identities = 13/139 (9%), Positives = 35/139 (25%), Gaps = 28/139 (20%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 S + +++ ++++ + + I + +P G Y + Sbjct: 1 YSDLSVKVSIAKQEVYVQSG-----GETIYTMIASTGLNDT----------TPRGNYVIG 45 Query: 72 PNQLNPDSRYYLAINIGF----PNAYDRAHGYTGKYLM--------IHGACVSVGCYAMT 119 + + + + TG G S GC +T Sbjct: 46 MRG-DHFYNPAEGMGADYWVRFNGPFLFHSVPTGANSGEYMEEEGNKLGQPASHGCVRLT 104 Query: 120 DAQIDEIFAFVRDAFVGGQ 138 A + + + + Sbjct: 105 VADAEWFYNQIPEGTPVTI 123 >ErfK_YbiS_YhnG_Q5X1P9_97-230_PF03734.4 Length = 134 Score = 74.5 bits (182), Expect = 1e-12 Identities = 22/138 (15%), Positives = 37/138 (26%), Gaps = 25/138 (18%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-L 75 I + +E+ + + L+ PI S + ++ G + V + + Sbjct: 6 IIVDQEKLAWGAYD----AQGNLVWWGPISSGSDKCSDSNK--VCRTLTGIFRVFSKENV 59 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEIF-A 128 S IG A Y K +HG+ S GC M + Sbjct: 60 RCTSDV---FPIGRGGAKMPYCMYFHKGFALHGSDDIPGVRASHGCVRMFIQDAKWLNEN 116 Query: 129 FVR--------DAFVGGQ 138 FV Sbjct: 117 FVELSSERNNFMGTKVIV 134 >ErfK_YbiS_YhnG_Q60A53_318-451_PF03734.4 Length = 134 Score = 74.5 bits (182), Expect = 1e-12 Identities = 14/148 (9%), Positives = 33/148 (22%), Gaps = 35/148 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV- 70 G+ I ++ + + + + Q ++++ + + G + + Sbjct: 1 GTDRKIFVYLDTQTMTAVEN-----GQTVRTFKVSTGKPQT---------PTVTGSFYIY 46 Query: 71 ------QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMT-- 119 I P A Y H G S GC M+ Sbjct: 47 ARFPTKTMKSRAKKGEKGHYIVENVPYAQYFYSDYAFHGAWWHNGFGRPASHGCVNMSTQ 106 Query: 120 ---------DAQIDEIFAFVRDAFVGGQ 138 ++ + Sbjct: 107 KHNVRWPKAPEDAGWLYQWASLGVPVTV 134 >ErfK_YbiS_YhnG_Q5ZVQ4_29-154_PF03734.4 Length = 126 Score = 74.1 bits (181), Expect = 2e-12 Identities = 18/113 (15%), Positives = 30/113 (26%), Gaps = 13/113 (11%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQ-LNPDSRYYLAINIGFPNA 92 ++I++ RR +P G + V S Y G P Sbjct: 19 SSNGKVIRTGRGSGGKHYCSDVRRSCK--TPSGVFRVISKGGPACRSSRYPLGKGGAPMP 76 Query: 93 YDRAHGYTGKYLMIHGAC------VSVGCYAMTDAQIDEI-FAFVRDAFVGGQ 138 + K IHG+ S GC + + F++ Sbjct: 77 ---YCMFFSKLYAIHGSPDVPNYNASHGCVRVKPHDARWLSQNFIKIGTKVII 126 >gi|15609655|ref|NP_217034.1| PROBABLE CONSERVED LIPOPROTEIN LPPS [Mycobacterium tuberculosis H37Rv] Length = 408 Score = 74.1 bits (181), Expect = 2e-12 Identities = 17/123 (13%), Positives = 35/123 (28%), Gaps = 24/123 (19%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN---PDSRYYLAI--NIG 88 +++KS P + G Y V + S Y + + G Sbjct: 267 RVNGEVVKSMPTSMGKDST---------PTANGIYIVGSRYKHIIMDSSTYGVPVNSPNG 317 Query: 89 FPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + D A + + +H A S GC ++ + + V+ + Sbjct: 318 YRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEV 377 Query: 139 PSV 141 + Sbjct: 378 VNT 380 >ErfK_YbiS_YhnG_Q6N429_21-139_PF03734.4 Length = 119 Score = 73.7 bits (180), Expect = 2e-12 Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 31/140 (22%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 + V I + K+ ++L + + +P+ + ++P G + Sbjct: 1 EAKVAITVDKDSQQLSV-----AVDGVERYRWPVSTGNP---------SHETPNGKFQTF 46 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQI 123 + + S+ + P + G IHG VS GC ++ Sbjct: 47 RMEADHYSKEFD----DAPMPHSIFFTKQGH--AIHGTDAAGKLGVPVSHGCVRLSRDNA 100 Query: 124 DEIFAFVRDAFVGGQPSVQV 143 ++A V G + V Sbjct: 101 ATLYALVE---KEGVLNTTV 117 >gi|15607258|ref|NP_214630.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] Length = 251 Score = 73.7 bits (180), Expect = 2e-12 Identities = 14/138 (10%), Positives = 30/138 (21%), Gaps = 29/138 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + +++++ P +P G + + Sbjct: 128 VASISAHTFTV-----SRNGEVLRTMPASLGKP---------SRPTPIGSFHAMSKERTV 173 Query: 78 DS-RYYLAINIGFPNAYDRAHGY----TGKYLMIHGACVS----------VGCYAMTDAQ 122 + I + + Y Y T + +H A S GC ++ Sbjct: 174 VMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDN 233 Query: 123 IDEIFAFVRDAFVGGQPS 140 F V Sbjct: 234 AAWYFDAVTVGDPIEVVG 251 >gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes] Length = 322 Score = 73.7 bits (180), Expect = 2e-12 Identities = 30/148 (20%), Positives = 50/148 (33%), Gaps = 19/148 (12%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 K +L L++ +L + S G KR EGD ++P G Y + Sbjct: 66 YLFIADKALSELSLYQLGGKKPERLAHT-KALMGSK-KGDKRIEGDLKTPIGVYDLTAKL 123 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC-------VSVGCYAMTDAQIDEI 126 LA +PN YD +G + IHG + GC A+ + + I Sbjct: 124 TRLDQLYGPLAFVTSYPNLYDSLQKKSGSGIWIHGLPLNGDREINTKGCIAIDNQLLKTI 183 Query: 127 FAFVR---------DAFVGGQPSVQVSI 145 + D + + ++ I Sbjct: 184 DGSINHKESLLITGDGNLFEVKNEELVI 211 >gi|17427103|emb|CAD13623.1| CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 143 Score = 73.7 bits (180), Expect = 3e-12 Identities = 21/160 (13%), Positives = 43/160 (26%), Gaps = 43/160 (26%) Query: 1 PVSKELKQQLPGSPVY---IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 P K + P +P I++ + +E + + + + Sbjct: 4 PTKKPSTKSRPKAPRTLKTIKVNLTSQIVEAFDSNNR-----VFRFECVSG--------- 49 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV------ 111 + D + G + V+ + SR + D A +T +H Sbjct: 50 DRDHPTDRGIFRVRWKAESHRSRA-------YDVQMDYALFFTNDGKALHQYHGVAPLAL 102 Query: 112 -------------SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + +A +FA+ Sbjct: 103 IRAARGNISEWFGSHGCVRLAEADAKALFAWASIGTTVQV 142 >ErfK_YbiS_YhnG_Q7NWP8_32-170_PF03734.4 Length = 139 Score = 73.7 bits (180), Expect = 3e-12 Identities = 18/148 (12%), Positives = 37/148 (25%), Gaps = 40/148 (27%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + +L L++ + +L + +P+ Q+P G + + Sbjct: 6 LVLNLPQARLFLYQ-----DGKLARIFPVAVGKMLT---------QTPTGSFDITGIYRA 51 Query: 77 PDSRYYLAI------------------NIGFPNAYDRAHGYTGKYLMIHGACV------- 111 P +I G + L HG Sbjct: 52 PSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRFGESSLGLGFHGTNAPGSVPGF 111 Query: 112 -SVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC + + E+ V Sbjct: 112 RSHGCVRLRNDDALELARTVSRGDAVTV 139 >ErfK_YbiS_YhnG_P94399_65-193_PF03734.4 Length = 129 Score = 73.3 bits (179), Expect = 3e-12 Identities = 18/145 (12%), Positives = 37/145 (25%), Gaps = 34/145 (23%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 V+I + +E+K + + I + I D +P+G + V+ Sbjct: 1 QKHVWIDVNVKEQKAYIKEGSNT-----IYTMMISSGLDQT------KDDATPKGTFYVE 49 Query: 72 PNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH------------------GACVSV 113 P + + + H G VS Sbjct: 50 PERGEWFFSEGYQEGAEY-----WVSWKNHGEFLFHSVPMTKDQKVIKTEAEKLGTKVSH 104 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQ 138 GC +T ++ + + Sbjct: 105 GCIRLTIPDAKWVYENIPEHTKVVI 129 >gi|33632702|emb|CAE07514.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 181 Score = 73.3 bits (179), Expect = 3e-12 Identities = 15/136 (11%), Positives = 31/136 (22%), Gaps = 41/136 (30%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINI----GFP 90 L ++P+ G ++P G ++V P + + G Sbjct: 53 ENGNLRLAFPVATGMPGW---------ETPTGSFAVFQKIDQPVWVHPVTGERVEEQGPD 103 Query: 91 NAYDRAHGYTGKYL--------------------MIHGAC--------VSVGCYAMTDAQ 122 N + HG +S GC + + Sbjct: 104 NPLGSHWIAFQRDCLGRDAHDGDRWITIKGCTTTGFHGTPHRWTVGRAISHGCVRLYNED 163 Query: 123 IDEIFAFVRDAFVGGQ 138 + ++ V Sbjct: 164 VRRLYGQVMLGTQVTV 179 >gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 192 Score = 73.3 bits (179), Expect = 3e-12 Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 31/142 (21%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 + + + + K+ +++ + + ++ ++P+ G +P G Y Sbjct: 23 ADLLVAVDKDAQRMSVL-----VDGEIRYTWPVSTGIAG---------HDTPNGSYRPFR 68 Query: 73 NQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQID 124 + SR + P + G IHG S GC ++ Sbjct: 69 MEKTHFSREWD----NAPMPHAIFFTQVGH--AIHGTTQTRRLGRAASHGCVRLSQRNAA 122 Query: 125 EIFAFVRDAFVGGQPSVQVSIY 146 +FA V+ + +V I Sbjct: 123 TLFALVKQQTMAR---TRVVIE 141 >DUF949_Q83CG1_72-171_PF06104.2 Length = 100 Score = 73.3 bits (179), Expect = 3e-12 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 9/103 (8%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPD 78 +FK +++LW G ++ I+S+PI SGG GPK +GD Q PEG Y + NP Sbjct: 1 VFKNSHRVQLWAKD-RGPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPA 57 Query: 79 SRYYLAINIGFPNAYDRAHGY------TGKYLMIHGACVSVGC 115 SR+ L++ + +PN+ DR + G + IHG+ S+GC Sbjct: 58 SRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGC 100 >gi|23492403|dbj|BAC17377.1| hypothetical protein [Corynebacterium efficiens YS-314] Length = 278 Score = 73.3 bits (179), Expect = 3e-12 Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 22/125 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + + L + + P+ G ++P G + + + Sbjct: 172 VCVDLDGGRSWLQENGQVVYGAV----PVSSGGIG---------QETPRGTFYINRKVKD 218 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV---SVGCYAMTDAQIDEIFAFVRDA 133 S + P Y Y G H V S GC + F V Sbjct: 219 EISYEF----GNAPMPYAMYFTYNGH--AFHQGNVARTSAGCVRLNPQDAIHYFNNVGIG 272 Query: 134 FVGGQ 138 + Sbjct: 273 DMVYI 277 >gi|29654387|ref|NP_820079.1| hypothetical protein CBU1080 [Coxiella burnetii RSA 493] Length = 160 Score = 73.0 bits (178), Expect = 4e-12 Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 48/163 (29%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 Y+ + + L L++ Q+IK Y + G G +P G++ ++ Sbjct: 4 YLTVDIPSQTLTLFRDN-----QVIKRYRVSTARNGPGELINSEK--TPRGWHIIRAKVG 56 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 + P Y A+ +P+ D +Y Sbjct: 57 EGCPPNTVFVERRPTGEVYSPALKRRYPD-RDWVLTRILWLSGLEVGKNRLGNVDTMRRY 115 Query: 104 LMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG+ S GC M + I E+F V Sbjct: 116 VYIHGSGDEIIMGKPGSRGCIRMHNHDIIELFDEVCAGDRVYI 158 >ErfK_YbiS_YhnG_Q83CN1_2-158_PF03734.4 Length = 157 Score = 73.0 bits (178), Expect = 4e-12 Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 48/163 (29%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN-- 73 Y+ + + L L++ Q+IK Y + G G +P G++ ++ Sbjct: 3 YLTVDIPSQTLTLFRDN-----QVIKRYRVSTARNGPGELINSEK--TPRGWHIIRAKVG 55 Query: 74 ----------QLNPDSR-YYLAINIGFPNAYDRAHGY-------------------TGKY 103 + P Y A+ +P+ D +Y Sbjct: 56 EGCPPNTVFVERRPTGEVYSPALKRRYPD-RDWVLTRILWLSGLEVGKNRLGNVDTMRRY 114 Query: 104 LMIHGA--------CVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + IHG+ S GC M + I E+F V Sbjct: 115 VYIHGSGDEIIMGKPGSRGCIRMHNHDIIELFDEVCAGDRVYI 157 >gi|15827218|ref|NP_301481.1| putative membrane protein [Mycobacterium leprae TN] Length = 271 Score = 73.0 bits (178), Expect = 5e-12 Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 24/114 (21%) Query: 42 SYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSR-----YYLAINIGFPNAYDRA 96 P +P G Y+V + + G+ + D A Sbjct: 167 VMPASMGKTEF---------PTPTGKYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYA 217 Query: 97 HGYTGKYLMIHGACV----------SVGCYAMTDAQIDEIFAFVRDAFVGGQPS 140 + + L IH A S GC +++ A + + V Sbjct: 218 VRISSRGLYIHSAPWAVQSMGFDNTSHGCISLSPADAEWYYNTVNIGDPVIVKE 271 >gi|68232378|ref|ZP_00571527.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. EAN1pec] Length = 132 Score = 73.0 bits (178), Expect = 5e-12 Identities = 16/139 (11%), Positives = 44/139 (31%), Gaps = 25/139 (17%) Query: 13 SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQP 72 +P + + + E +L +++ ++ P+ + + +P G + + Sbjct: 8 TPFELLVDRSEHQLTIFRDN-----TVVAKLPVGIGTEAI---------PTPTGTFYLTE 53 Query: 73 NQL--NPDSRYYL-AINIGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDA 121 +P+ + A + + + +HG VS+GC + +A Sbjct: 54 LLRPGDPNGPWGPFAFGLSGFSDVITQFNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNA 113 Query: 122 QIDEIFAFVRDAFVGGQPS 140 + + V Sbjct: 114 DLLRLVDVVPLGTPITIVG 132 >gi|32443240|emb|CAD72071.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 428 Score = 72.6 bits (177), Expect = 5e-12 Identities = 22/146 (15%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 9 QLPGSPVYIR-------IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDF 61 LPG+ + + I + ++L L+ + + I + Sbjct: 298 ILPGTDLKVVRGPFRGDIDLKYQELTLFLGDLYA-----GRFKIAVGNDP---------A 343 Query: 62 QSPEGFYSVQPNQLNPDSR---YYLAINIGFPNAYDRAHGYTGKYLMIHGACVSV----- 113 P G Y++Q Q N Y G L IHG+ + Sbjct: 344 PKP-GSYTIQEKQSAKTYYDMSGTPIPPGNPRNPYGSMWIDLGSGLSIHGSPDANAPTDK 402 Query: 114 GCYAMTDAQIDEIFAFVRDAFVGGQP 139 GC ++ ++F + + Sbjct: 403 GCISLAGNYSRDVFGILSEGSSVTIR 428 >gi|68174957|ref|ZP_00548215.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 274 Score = 72.6 bits (177), Expect = 5e-12 Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 27/146 (18%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 + + + ++++ + +L L++ LI + + D +P G Sbjct: 144 QVRASTTAYHLQVVRGAHQLRLYRGN-----TLISLFVVAVG---------TTDTPTPGG 189 Query: 67 FYSVQP--NQLNPDSRYYLAINI--GFPNAYDRAHGYTGKYLMIHGAC--------VSVG 114 Y + NP Y GF + G+ + +HG VS G Sbjct: 190 RYYLTELLRPRNPTGPYGPFAFGLSGFSTSLASFEGHA-PIIGLHGTDQPHTLGRDVSHG 248 Query: 115 CYAMTDAQIDEIFAFVRDAFVGGQPS 140 C ++++ I + + + Sbjct: 249 CIRLSNSDITWLAGMLPLGTPVDIVA 274 >ErfK_YbiS_YhnG_Q70K55_232-359_PF03734.4 Length = 128 Score = 72.6 bits (177), Expect = 5e-12 Identities = 15/137 (10%), Positives = 35/137 (25%), Gaps = 29/137 (21%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I + + + + ++I++ P +P G Y + + Sbjct: 6 IVADDNTKTIVV-----KRDGKVIRTMPTSFGKDST---------PTPRGIYMIGDRVEH 51 Query: 77 -----PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDA 121 + G+ A + + +HGA S GC ++ A Sbjct: 52 IIMDSSTYGVPVESAAGYRTPVQWAVQMSYSGIYMHGAPWSMSAQGNSNVSNGCPNLSPA 111 Query: 122 QIDEIFAFVRDAFVGGQ 138 + + Sbjct: 112 DAEWLVKNTLRGDPVTV 128 >ErfK_YbiS_YhnG_Q5WX10_101-234_PF03734.4 Length = 134 Score = 72.6 bits (177), Expect = 6e-12 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 16/119 (13%) Query: 23 ERKLELWKAK-----MGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL-N 76 E+ + + + K + +L+ PI +G + G +P G + + Q + Sbjct: 3 EKTIYVSQKKLAWGAYDEDGELLWWGPISSG---VGKCKVIGGCSTPTGSFRIIRKQDID 59 Query: 77 PDSR-YYLAINIGFPNAYDRAHGYTGKYLMIHG------ACVSVGCYAMTDAQIDEIFA 128 S + N A + + +HG S GC M + Sbjct: 60 CVSTVFPRRANGEHGGALMPYCMHFFRGYALHGSYEVPGYRASHGCVRMFIEDARWLNE 118 >gi|67154504|ref|ZP_00416249.1| ErfK/YbiS/YcfS/YnhG [Azotobacter vinelandii AvOP] Length = 174 Score = 72.2 bits (176), Expect = 6e-12 Identities = 22/168 (13%), Positives = 45/168 (26%), Gaps = 48/168 (28%) Query: 15 VYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPN- 73 ++ I ++ L + +L+ + G G R G +P G + V+ Sbjct: 5 DFLHISLADQALY-----GFADGRLLLRLAVSTALNGPG--ERSGSGCTPRGLHQVRAKI 57 Query: 74 ------------QLNPDSRYYLAINIGFP-------------------NAYDRAHGYTGK 102 + + ++ FP N + Sbjct: 58 GAGLPAGAVLRGRRWTGEVWTPELHEAFPGRDWILSRILWLSGCEIGRNRLGPVDT-FRR 116 Query: 103 YLMIHGACVS--------VGCYAMTDAQIDEIFAFVRDAFVGGQPSVQ 142 Y+ +HG S GC + +A + E++ V Sbjct: 117 YIYLHGTPDSEPMGVPRSHGCVRLRNADLLELYPRVPLHCRVRIEEAP 164 >gi|48865171|ref|ZP_00319035.1| COG1376: Uncharacterized protein conserved in bacteria [Oenococcus oeni PSU-1] Length = 194 Score = 72.2 bits (176), Expect = 7e-12 Identities = 15/154 (9%), Positives = 34/154 (22%), Gaps = 39/154 (25%) Query: 7 KQQLPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEG 66 V+I + ++++ + +++ D +P G Sbjct: 58 PVLSKYKNVWIDVSIAKQRVYIKSGN-----KILYEMYCSTG----------IDDSTPTG 102 Query: 67 FYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH------------------- 107 Y +Q + Y + G A + H Sbjct: 103 TYKIQ--KERGTFFYNASSKEG---ARYWVSWKDNGVYLFHTVPTDKNGKYIVSQAKELG 157 Query: 108 GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSV 141 S GC ++ I+ + Sbjct: 158 KKPNSHGCVHLSIPDAKWIYKNISQGTKVVVHGT 191 >gi|29609712|dbj|BAC73761.1| putative lipoprotein [Streptomyces avermitilis MA-4680] Length = 421 Score = 72.2 bits (176), Expect = 7e-12 Identities = 19/137 (13%), Positives = 35/137 (25%), Gaps = 27/137 (19%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEGFYSVQPN 73 + +++ + I P+ G G K G Y V+ Sbjct: 248 VTDAAAHSMTVFRN-----GKEINQIPVTTGKAGFETRNGVKVVLGK------EYFVRMR 296 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQI 123 + + A T +H A S GC M+ + Sbjct: 297 GTTVGIAEGSSD--SYDLPVYYATRVTWSGEYVHAAPWSVGSQGSANVSHGCTGMSTSNA 354 Query: 124 DEIFAFVRDAFVGGQPS 140 + F VR+ + + Sbjct: 355 EWFFDTVREGDIVKVVN 371 >gi|2222712|emb|CAB09907.1| hypothetical protein MLCL383.33 [Mycobacterium leprae] Length = 407 Score = 72.2 bits (176), Expect = 7e-12 Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 24/123 (19%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN---PDSRYYLAI--NIG 88 +++K P + G Y V + S Y + + G Sbjct: 266 RVNGEVVKIMPTSMGKDST---------PTANGIYIVGARFKHIIMDSSTYGVPVNSPNG 316 Query: 89 FPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 + D A + + +H A S GC ++ + + V+ + Sbjct: 317 YRADVDWATQLSYSGVFLHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEV 376 Query: 139 PSV 141 + Sbjct: 377 VNT 379 >gi|41409618|ref|NP_962454.1| hypothetical protein MAP3520c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 252 Score = 72.2 bits (176), Expect = 7e-12 Identities = 15/138 (10%), Positives = 33/138 (23%), Gaps = 29/138 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + + +++++ P +P G ++ Q + Sbjct: 129 VASISKHTFTV-----SRNGEVLRTMPASMGKP---------SRPTPIGNFTALEKQRSV 174 Query: 78 DS-RYYLAINIGFPNAYDRAHGY----TGKYLMIHGACVS----------VGCYAMTDAQ 122 + I + P Y Y T + +H A S G ++ Sbjct: 175 VMDSRTIGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDN 234 Query: 123 IDEIFAFVRDAFVGGQPS 140 F V + Sbjct: 235 AAWYFNEVNVGDPIQVVA 252 >gi|48870588|ref|ZP_00323309.1| COG1376: Uncharacterized protein conserved in bacteria [Pediococcus pentosaceus ATCC 25745] Length = 477 Score = 72.2 bits (176), Expect = 7e-12 Identities = 19/141 (13%), Positives = 37/141 (26%), Gaps = 28/141 (19%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 I I +L L + + + + I S + +P G Y ++ Sbjct: 348 IEIDLTHERLYLVQNQ-----TVAQKIRINTGSPKINIA-------TPTGAYFIKFKIAP 395 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV----------------SVGCYAMTD 120 R Y + + +A T + IH A S GC + Sbjct: 396 ITMRGYEKNGEPYKSYVPQADNLTDDGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPP 455 Query: 121 AQIDEIFAFVRDAFVGGQPSV 141 + +++ Sbjct: 456 KDMVKLYQKTTVDEPVIIYGQ 476 >ErfK_YbiS_YhnG_Q5Z0B4_244-372_PF03734.4 Length = 129 Score = 72.2 bits (176), Expect = 8e-12 Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 24/119 (20%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN---PDSRYYLAINI--GF 89 Q+I++ P + G Y V S Y +A+N G+ Sbjct: 20 QNGQVIRTMPTSMGKDST---------PTDNGIYIVADKHEKIIMDSSTYGVAVNSPDGY 70 Query: 90 PNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQIDEIFAFVRDAFVGGQ 138 D A + + H A S GC ++ A ++ F + + Sbjct: 71 RTPVDFATRISYSGIFFHSAPWSVGAQGNSNTSHGCLNLSPANAQWVYNFAKRGDITII 129 >gi|37520540|ref|NP_923917.1| hypothetical protein glr0971 [Gloeobacter violaceus PCC 7421] Length = 435 Score = 72.2 bits (176), Expect = 8e-12 Identities = 17/149 (11%), Positives = 38/149 (25%), Gaps = 34/149 (22%) Query: 10 LPGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYS 69 G+ +I I+ + +K+ + ++++++ + G + G + Sbjct: 291 TTGTDRHIYIYLDTQKVAAVEN-----GRVVRTFRVSTGKAGT---------PTVTGNFY 336 Query: 70 V-------QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIH---GACVSVGCYAMT 119 + + P A GY H G VS GC M Sbjct: 337 IYDRYAIKTMRSRADPGEPGHYVVENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMA 396 Query: 120 D----------AQIDEIFAFVRDAFVGGQ 138 ++ + Sbjct: 397 TRRFNKRSGVSEDAGWLWKWAAMGVPVTV 425 >gi|21323324|dbj|BAB97952.1| Uncharacterized BCR [Corynebacterium glutamicum ATCC 13032] Length = 276 Score = 72.2 bits (176), Expect = 8e-12 Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 22/125 (17%) Query: 17 IRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLN 76 + + + + L + + P+ G ++P G + + + Sbjct: 170 VCVDIDGGRTWLQENGQVTYGAV----PVSSGGVG---------QETPRGTFYINRKVKD 216 Query: 77 PDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV---SVGCYAMTDAQIDEIFAFVRDA 133 S + P Y Y G H V S GC + F V Sbjct: 217 EISYEF----GNAPMPYAMYFTYNGH--AFHQGNVATTSAGCVRLNTQDAIYYFNNVGIG 270 Query: 134 FVGGQ 138 + Sbjct: 271 DMVYI 275 >gi|66856769|ref|ZP_00400831.1| similar to Uncharacterized protein conserved in bacteria [Anaeromyxobacter dehalogenans 2CP-C] Length = 175 Score = 72.2 bits (176), Expect = 8e-12 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 23/136 (16%) Query: 11 PGSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSV 70 P S + + + R+L L + + G+G KRR GD ++P G Y + Sbjct: 39 PRSRDAVVVVTDRRELWLCSGGAPA-----AQFTVALGRSGVG-KRRRGDGRTPLGTYPL 92 Query: 71 QPNQLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGAC--------------VSVGCY 116 + +P +Y I I +P A G+TG + IHG + GC Sbjct: 93 GDPRPSP--QYGTFIPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCI 150 Query: 117 AM-TDAQIDEIFAFVR 131 A TD +D I AFVR Sbjct: 151 ATGTDGDVDAIAAFVR 166 >gi|3462874|gb|AAC34464.1| unknown [Rhizobium etli] Length = 106 Score = 72.2 bits (176), Expect = 8e-12 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 27/121 (22%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAY 93 + + + G + +P G +S + + SR + NA Sbjct: 4 TENGFVKYRWKVSTARNG---------YVTPTGSWSAKWLSRDHSSRK-------YDNAP 47 Query: 94 DRAHGYTGKYLMIH--------GACVSVGCYAMTDAQIDEIFAFVRDAFVGGQPSVQVSI 145 + +H G S GC + E F+ R G + +V I Sbjct: 48 MPYAVFFNGGYAVHATFDLKRLGRPASHGCVRLHPDNAAEFFSLAR---QAGLANTRVVI 104 Query: 146 Y 146 Sbjct: 105 T 105 >gi|62514270|ref|ZP_00385778.1| COG1376: Uncharacterized protein conserved in bacteria [Lactobacillus casei ATCC 334] Length = 234 Score = 72.2 bits (176), Expect = 8e-12 Identities = 16/155 (10%), Positives = 41/155 (26%), Gaps = 33/155 (21%) Query: 2 VSKELKQQLPG----SPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRR 57 + KQ P + + + +++++ + + + + + Sbjct: 94 TAPSEKQAYPDLTQHPNITLDVNLKKQRVFIKEGD-----KTLYTMYASTG--------- 139 Query: 58 EGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAYDRAHGYTG-------KYLMI---- 106 D +P G +++Q + + + ++ Y I Sbjct: 140 -IDDSTPRGDFAIQDERGYEFFNPNEQMGAHYYTSFYLHGTYLFHTVPTDVGGQYIKNEA 198 Query: 107 ---HGACVSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 S GC ++ A IF V Sbjct: 199 AKLGKEPGSHGCVRLSIADAKWIFEHVPTGTPVKV 233 >ErfK_YbiS_YhnG_Q6NFS1_231-358_PF03734.4 Length = 128 Score = 71.8 bits (175), Expect = 8e-12 Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 32/143 (22%) Query: 12 GSPVYIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQ 71 G V + + ++K Q + S P+ + +P G Y++ Sbjct: 2 GDRVEAVADDATKTMVIYKN-----GQQVNSMPVSMG---------ANKWPTPNGIYTIG 47 Query: 72 PNQLNPDS-----RYYLAIN-IGFPNAYDRAHGYTGKYLMIHGACVS----------VGC 115 NP Y LA N G+ A + + +H A S GC Sbjct: 48 DK--NPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGC 105 Query: 116 YAMTDAQIDEIFAFVRDAFVGGQ 138 ++ +V+ + Sbjct: 106 INVSTDNAAWFQNYVKRGDIVRV 128 >gi|68175646|ref|ZP_00548886.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3] Length = 464 Score = 71.8 bits (175), Expect = 8e-12 Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 29/138 (21%) Query: 19 IFKEERKLELWKAKMGGEYQLIKSYPICKWSGGL----GPKRREGDFQSPEG-FYSVQPN 73 + +++++ + QL+++ P+ L GP G +V Sbjct: 278 VDSATHTMKVFR-----DGQLLRTMPVSLGRPSLPSMDGPHNVLGKSPEVIMDSATVGIP 332 Query: 74 QLNPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACVS----------VGCYAMTDAQI 123 Q NPD Y A YT +H A S GC + A Sbjct: 333 QGNPDYYYEK---------VQWAVNYTSGGQYVHSAPWSVPSQGRANVSHGCVNASPADA 383 Query: 124 DEIFAFVRDAFVGGQPSV 141 + F R + + Sbjct: 384 QWFYNFTRLGDIIDIVNT 401 >ErfK_YbiS_YhnG_Q97L19_343-463_PF03734.4 Length = 121 Score = 71.8 bits (175), Expect = 1e-11 Identities = 16/135 (11%), Positives = 34/135 (25%), Gaps = 31/135 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 Y+ + ++ L +K L+ + + +P G Y ++ + Sbjct: 5 YVEVDLSKQHLWFYKN-----GSLVVQGDVVTG-------NVSENDATPAGVYRLKYKER 52 Query: 76 NPDSRYYLAINIGFPNAYDRAHGYTGKYLMIHGACV-------------SVGCYAMTDAQ 122 N + G+ + + IH A S GC Sbjct: 53 NATLK-----GQGYSSPV-SYWMPFNGGIGIHDANWRSVFGGEIYKTGGSHGCVNSPYDL 106 Query: 123 IDEIFAFVRDAFVGG 137 +F + Sbjct: 107 AKTVFENIDAGTPVV 121 >gi|68191412|gb|EAN06068.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1] Length = 139 Score = 71.8 bits (175), Expect = 1e-11 Identities = 16/135 (11%), Positives = 38/135 (28%), Gaps = 33/135 (24%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 R+ ++ + + K Q++ +P+ G + +P G + Sbjct: 26 RVSLSKQVMTVKKGN-----QVLYRWPVSTARKG---------YVTPRGRWKPTRMHRMW 71 Query: 78 DSRYYLAINIGFPNAYDRAHGYTGKYLMIHGA--------CVSVGCYAMTDAQIDEIFAF 129 SR + + + + IHG S GC + ++++ Sbjct: 72 RSRK-------YDMSPMPFSIFYHRGYAIHGTYAVKSLGRRASHGCVRLHPDNAAKLYSL 124 Query: 130 V----RDAFVGGQPS 140 V + Sbjct: 125 VKEIGPANTLVVVTD 139 >ErfK_YbiS_YhnG_O86068_2-104_PF03734.4 Length = 103 Score = 71.4 bits (174), Expect = 1e-11 Identities = 17/117 (14%), Positives = 30/117 (25%), Gaps = 28/117 (23%) Query: 34 GGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINIGFPNAY 93 + + + G + +P G +S + + SR + NA Sbjct: 3 TENGFVKYRWKVSTARNG---------YVTPTGSWSAKWLSRDHSSRK-------YDNAP 46 Query: 94 DRAHGYTGKYLMIH--------GACVSVGCYAMTDAQIDEIFAFVRDA----FVGGQ 138 + +H G S GC + E F+ R A Sbjct: 47 MPYAVFFNGGYAVHATFDLKRLGRPASHGCVRLHPDNAAEFFSLARQAGLANTRVVI 103 >ErfK_YbiS_YhnG_Q73U48_122-250_PF03734.4 Length = 129 Score = 71.4 bits (174), Expect = 1e-11 Identities = 15/136 (11%), Positives = 32/136 (23%), Gaps = 29/136 (21%) Query: 18 RIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNP 77 + + +++++ P +P G ++ Q + Sbjct: 8 VASISKHTFTV-----SRNGEVLRTMPASMGKP---------SRPTPIGNFTALEKQRSV 53 Query: 78 DS-RYYLAINIGFPNAYDRAHGY----TGKYLMIHGACVS----------VGCYAMTDAQ 122 + I + P Y Y T + +H A S G ++ Sbjct: 54 VMDSRTIGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDN 113 Query: 123 IDEIFAFVRDAFVGGQ 138 F V Sbjct: 114 AAWYFNEVNVGDPIQV 129 >ErfK_YbiS_YhnG_Q7U7I3_35-179_PF03734.4 Length = 145 Score = 71.4 bits (174), Expect = 1e-11 Identities = 15/136 (11%), Positives = 31/136 (22%), Gaps = 41/136 (30%) Query: 35 GEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAINI----GFP 90 L ++P+ G ++P G ++V P + + G Sbjct: 19 ENGNLRLAFPVATGMPGW---------ETPTGSFAVFQKIDQPVWVHPVTGERVEEQGPD 69 Query: 91 NAYDRAHGYTGKYL--------------------MIHGAC--------VSVGCYAMTDAQ 122 N + HG +S GC + + Sbjct: 70 NPLGSHWIAFQRDCLGRDAHDGDRWITIKGCTTTGFHGTPHRWTVGRAISHGCVRLYNED 129 Query: 123 IDEIFAFVRDAFVGGQ 138 + ++ V Sbjct: 130 VRRLYGQVMLGTQVTV 145 >ErfK_YbiS_YhnG_Q7V696_87-217_PF03734.4 Length = 131 Score = 71.4 bits (174), Expect = 1e-11 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 32/141 (22%) Query: 16 YIRIFKEERKLELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQL 75 + + R++ + + + + + +P+ +P G + V+ + Sbjct: 5 KVVLLLGRREISVIR-----DGEKLGPWPVAIGDPRT---------PTPTGVFKVENKVI 50 Query: 76 NPDSRYYLAI----NIGFPNAYDRAH----GYTGKYLMIHGACV----------SVGCYA 117 NP + + IG + IHG + GC Sbjct: 51 NPQYQSTKSGRVNPAIGVASPLGDRWIGFLQSGQNQFGIHGTPWPYWVNAKAAVTNGCVR 110 Query: 118 MTDAQIDEIFAFVRDAFVGGQ 138 M A + ++F V Sbjct: 111 MLHAHVRQLFDVVEVGTTVEI 131 >gi|68205981|ref|ZP_00558177.1| ErfK/YbiS/YcfS/YnhG [Desulfitobacterium hafniense DCB-2] Length = 115 Score = 71.4 bits (174), Expect = 1e-11 Identities = 22/122 (18%), Positives = 35/122 (28%), Gaps = 33/122 (27%) Query: 27 ELWKAKMGGEYQLIKSYPICKWSGGLGPKRREGDFQSPEGFYSVQPNQLNPDSRYYLAIN 86 EL+ QL+ YP +P G Y+V +NP + Sbjct: 19 ELYDGN-----QLLACYPCAVGKSST---------PTPLGNYAVATKVMNPGGAFG---- 60 Query: 87 IGFPNAYDRAHGYTGKYLMIHGAC--------VSVGCYAMTDAQIDEIFAFVRDAFVGGQ 138 R G + IHG S+GC M + ++ ++ V Sbjct: 61 -------TRWLGLSLPDYGIHGTNKPASIGTQASLGCIRMHNHHVEALYDQVGAGTPVII 113 Query: 139 PS 140 Sbjct: 114 TE 115 Database: nr95_Pfam18 Posted date: Oct 20, 2005 3:49 PM Number of letters in database: 830,037,145 Number of sequences in database: 2,959,546 Lambda K H 0.310 0.156 0.447 Lambda K H 0.267 0.0478 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,104,791,458 Number of Sequences: 2959546 Number of extensions: 104635484 Number of successful extensions: 200617 Number of sequences better than 1.0: 600 Number of HSP's better than 1.0 without gapping: 1757 Number of HSP's successfully gapped in prelim test: 625 Number of HSP's that attempted gapping in prelim test: 194027 Number of HSP's gapped (non-prelim): 2488 length of query: 201 length of database: 830,037,145 effective HSP length: 120 effective length of query: 81 effective length of database: 474,891,625 effective search space: 38466221625 effective search space used: 38466221625 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 80 (35.2 bits)