RID=1088428055-2345-187988161107.BLASTQ4, NP_651134.1_220-424 BLASTP 2.2.9 [May-01-2004]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1088428055-2345-187988161107.BLASTQ4

Query= NP_651134.1_220-424 (205 letters)

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 1,875,456 sequences; 622,745,705 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs




Results of PSI-Blast iteration 3
Skip to the first new sequence


Distribution of 133 Blast Hits on the Query Sequence



Legend:

New sequence mark - means that the alignment score was below the threshold on the previous iteration

Checked mark - means that the alignment was checked on the previous iteration


Hit list size
Sequences with E-value BETTER than threshold
Related Structures Score E Sequences producing significant alignments: (bits) Value

 Checked mark gi|24649260|ref|NP_651134.1| CG4449-PA [Drosophila melanogaster] 328 5e-89 LocusLink info
 Checked mark gi|21430264|gb|AAM50810.1| LD33701p [Drosophila melanogaster] 327 7e-89 LocusLink info
 Checked mark gi|31200225|ref|XP_309060.1| ENSANGP00000019625 [Anopheles gambiae] 286 2e-76
 Checked mark gi|11041477|dbj|BAB17279.1| hypothetical protein [Macaca fascicu... 190 1e-47
 Checked mark gi|21360814|gb|AAM49721.1| hypothetical protein [Homo sapiens] 187 1e-46 LocusLink info
New sequence mark gi|14042298|dbj|BAB55189.1| unnamed protein product [Homo sapien... 186 2e-46 LocusLink info
 Checked mark gi|46447823|ref|NP_116204.3| nuclear factor of activated T-cells... 186 3e-46 LocusLink info
 Checked mark gi|39591579|emb|CAE71155.1| Hypothetical protein CBG18011 [Caeno... 185 7e-46
New sequence mark gi|45751566|gb|AAH68007.1| FLJ14639 protein [Homo sapiens] 173 3e-42 LocusLink info
New sequence mark gi|1747519|gb|AAC52963.1| nuclear protein NIP45 [Mus musculus] 164 1e-39 LocusLink info
New sequence mark gi|33468909|ref|NP_035030.1| nuclear factor of activated T-cells... 164 1e-39 LocusLink info
New sequence mark gi|12838793|dbj|BAB24331.1| unnamed protein product [Mus musculus] 161 7e-39 LocusLink info
New sequence mark gi|34860127|ref|XP_219329.2| similar to nuclear protein NIP45 [R... 160 2e-38 LocusLink info
New sequence mark gi|17554898|ref|NP_497960.1| putative nuclear protein (3F783) [C... 74 2e-12 LocusLink info
New sequence mark gi|37546495|ref|XP_168354.2| similar to SMT3 suppressor of mif t... 58 2e-07 LocusLink info
New sequence mark gi|2707597|gb|AAB92355.1| nonstructural protein P125-2 [pestivir... 56 6e-07
New sequence mark gi|34912494|ref|NP_917594.1| putative amino acid or GABA permeas... 55 6e-07
New sequence mark gi|21361388|ref|NP_008868.2| SMT3 suppressor of mif two 3 homolo... 54 2e-06 LocusLink info
New sequence mark gi|28277282|gb|AAH45271.1| Smt3h2-prov protein [Xenopus laevis] 54 2e-06 LocusLink info
New sequence mark gi|19111164|ref|NP_579932.1| SMT3 (supressor of mif two, 3) homo... 54 2e-06 LocusLink info
New sequence mark gi|9910556|ref|NP_064313.1| SMT3 (supressor of mif two, 3) homol... 54 2e-06 LocusLink info
New sequence mark gi|33304726|gb|AAP34642.1| small ubiquitin-like modifier [Bigelo... 53 3e-06
New sequence mark gi|30584365|gb|AAP36431.1| Homo sapiens SMT3 suppressor of mif t... 53 4e-06
New sequence mark gi|47229942|emb|CAG10356.1| unnamed protein product [Tetraodon n... 53 4e-06
New sequence mark gi|48928058|ref|NP_008867.2| small ubiquitin-like modifier prote... 53 4e-06 LocusLink info
New sequence mark gi|49256565|gb|AAH72995.1| Unknown (protein for MGC:82571) [Xeno... 53 5e-06
New sequence mark gi|34849696|gb|AAH58303.1| Zgc:65847 protein [Danio rerio] >gi|4... 53 5e-06 LocusLink info
New sequence mark gi|18408968|ref|NP_564924.1| ubiquitin-related [Arabidopsis thal... 52 1e-05
New sequence mark gi|47214992|emb|CAG03132.1| unnamed protein product [Tetraodon n... 51 1e-05
New sequence mark gi|32450081|gb|AAH54172.1| MGC64297 protein [Xenopus laevis] 51 1e-05 LocusLink info
New sequence mark gi|1770517|emb|CAA67896.1| SMT3A protein [Homo sapiens] 51 2e-05 LocusLink info
New sequence mark gi|34866007|ref|XP_346731.1| hypothetical protein XP_346730 [Rat... 50 2e-05 LocusLink info
New sequence mark gi|42657694|ref|XP_376612.1| similar to SMT3 suppressor of mif t... 49 6e-05 LocusLink info
New sequence mark gi|38086507|ref|XP_355884.1| similar to SMT3 suppressor of mif t... 49 6e-05 LocusLink info
New sequence mark gi|47226342|emb|CAG09310.1| unnamed protein product [Tetraodon n... 49 7e-05
New sequence mark gi|20821491|ref|XP_143645.1| similar to SMT3 suppressor of mif t... 48 8e-05 LocusLink info
New sequence mark gi|47218566|emb|CAG10265.1| unnamed protein product [Tetraodon n... 48 1e-04
New sequence mark gi|19112827|ref|NP_596035.1| ubiquitin-like modifier [Schizosacc... 48 1e-04
New sequence mark gi|49086586|ref|XP_405328.1| hypothetical protein AN1191.2 [Aspe... 48 1e-04
New sequence mark gi|34869634|ref|XP_212687.2| similar to SMT3 suppressor of mif t... 48 1e-04 LocusLink info
New sequence mark gi|47211840|emb|CAF90473.1| unnamed protein product [Tetraodon n... 48 1e-04
New sequence mark gi|46435317|gb|EAK94701.1| hypothetical protein CaO19.670 [Candi... 47 2e-04
New sequence mark gi|39589515|emb|CAE74544.1| Hypothetical protein CBG22301 [Caeno... 47 2e-04
New sequence mark gi|17508217|ref|NP_490842.1| SUMO, small ubiquitin-like modifier... 47 4e-04 LocusLink info
New sequence mark gi|6691508|dbj|BAA89293.1| small ubiquitin-related protein 1 [On... 46 4e-04
New sequence mark gi|7488638|pir||T09529 ubiquitin-like protein - chickpea >gi|255... 46 6e-04
New sequence mark gi|23613081|ref|NP_703403.1| ubiquitin-like protein, putative [P... 45 7e-04
New sequence mark gi|49079730|ref|XP_403478.1| hypothetical protein UM05863.1 [Ust... 45 8e-04
New sequence mark gi|45199216|ref|NP_986245.1| AFR697Cp [Eremothecium gossypii] >g... 45 8e-04
New sequence mark gi|11279016|pir||T43537 ubiquitin-like protein smt3 - fission ye... 45 9e-04
New sequence mark gi|1707372|emb|CAA67923.1| ubiquitin-like protein [Arabidopsis t... 45 0.001
New sequence mark gi|2501449|sp|P55857|SMT3_ORYSA Ubiquitin-like protein SMT3 >gi|... 45 0.001
New sequence mark gi|46108880|ref|XP_381498.1| hypothetical protein FG01322.1 [Gib... 45 0.001
New sequence mark gi|48102954|ref|XP_392826.1| similar to SUMO, small ubiquitin-li... 45 0.001 LocusLink info
New sequence mark gi|8569260|pdb|1EUV|B Chain B, X-Ray Structure Of The C-Terminal... 45 0.001 Related structures
New sequence mark gi|6320718|ref|NP_010798.1| may be involved in function and/or s... 45 0.001 Related structures
New sequence mark gi|13386248|ref|NP_081946.1| RIKEN cDNA 4933411G06 [Mus musculus... 44 0.001 LocusLink info
New sequence mark gi|41151251|ref|XP_372870.1| similar to Ubiquitin-like protein S... 44 0.001 LocusLink info
New sequence mark gi|34907008|ref|NP_914851.1| putative ubiquitin-like protein [Or... 44 0.002
New sequence mark gi|15236885|ref|NP_194414.1| ubiquitin-like protein (SMT3) [Arab... 44 0.002
New sequence mark gi|17137634|ref|NP_477411.1| CG4494-PA [Drosophila melanogaster]... 44 0.002 LocusLink info
New sequence mark gi|41351308|gb|AAH65723.1| Unknown (protein for MGC:71987) [Homo... 44 0.002
New sequence mark gi|20386038|gb|AAM21559.1| small ubiquitin-like protein [Dictyos... 43 0.005

Sequences with E-value WORSE than threshold

  gi|20983024|ref|XP_125372.1| similar to SMT3 suppressor of mif t... 43 0.005 LocusLink info
  gi|15240471|ref|NP_200327.1| small ubiquitin-like modifier 2 (SU... 42 0.006
  gi|38092027|ref|XP_110945.2| similar to SMT3 suppressor of mif t... 42 0.007 LocusLink info
  gi|46228698|gb|EAK89568.1| similar to ubiquitin-like protein SMT... 42 0.008
  gi|32420039|ref|XP_330463.1| hypothetical protein [Neurospora cr... 42 0.008
  gi|20386084|gb|AAM21576.1| ubiquitin-like protein SMT3 [Phaseolu... 42 0.008
  gi|34876663|ref|XP_217413.2| similar to Chain , Structure Deter... 42 0.009 LocusLink info
  gi|33604214|gb|AAH56283.1| Zgc:65934 protein [Danio rerio] >gi|4... 42 0.011 LocusLink info
  gi|2791892|emb|CAB09807.1| SUMO-1 protein [Xenopus laevis] 42 0.011 LocusLink info
  gi|34852367|ref|XP_215371.2| similar to ubiquitin-conjugating en... 42 0.012 LocusLink info
  gi|15240472|ref|NP_200328.1| small ubiquitin-like modifier 3 (SU... 41 0.014
  gi|6433950|emb|CAB60728.1| SUMO protein [Lycopersicon esculentum] 41 0.016
  gi|42490984|gb|AAH66306.1| SUMO1 protein [Homo sapiens] 41 0.020 LocusLink info
  gi|3892023|pdb|1A5R| Structure Determination Of The Small Ubiqu... 40 0.021 Related structures
  gi|29247808|gb|EAA39359.1| GLP_336_5901_6209 [Giardia lamblia AT... 40 0.025
  gi|4507801|ref|NP_003343.1| SMT3 suppressor of mif two 3 homolog... 40 0.025 LocusLink info
  gi|9664277|gb|AAF97049.1| sentrin [Cervus nippon] 40 0.026
  gi|45383836|ref|NP_989466.1| ubiquitin-like 1 (sentrin) [Gallus ... 40 0.026 LocusLink info
  gi|41617348|tpg|DAA02613.1| TPA: HDC07231 [Drosophila melanogaster] 40 0.033
  gi|38109015|gb|EAA54946.1| hypothetical protein MG05737.4 [Magna... 40 0.043
  gi|19112787|ref|NP_595995.1| hypothetical protein [Schizosacchar... 39 0.060
  gi|39580526|emb|CAE66529.1| Hypothetical protein CBG11828 [Caeno... 38 0.089
  gi|398985|sp|Q01802|AATM_YEAST Aspartate aminotransferase, mitoc... 38 0.14
  gi|34393565|dbj|BAC83163.1| unknown protein [Oryza sativa (japon... 36 0.40
  gi|45916443|ref|ZP_00197496.1| COG3664: Beta-xylosidase [Mesorhi... 36 0.46
  gi|6322743|ref|NP_012816.1| Mitochondrial aspartate aminotransfe... 36 0.49
  gi|46228280|gb|EAK89179.1| hypothetical protein cgd3_900 [Crypto... 36 0.52
  gi|7486092|pir||T00792 hypothetical protein At2g32760 [imported]... 36 0.65
  gi|38106095|gb|EAA52445.1| hypothetical protein MG05137.4 [Magna... 36 0.67
  gi|19074488|ref|NP_585994.1| UBIQUITIN-LIKE PROTEIN [Encephalito... 35 0.69
  gi|18403073|ref|NP_565752.1| small ubiquitin-like modifier 5 (SU... 35 0.84
  gi|23619122|ref|NP_705084.1| hypothetical protein [Plasmodium fa... 35 0.90
  gi|2599012|gb|AAC61636.1| T-cell receptor alpha chain VJ region ... 35 0.94
  gi|45190854|ref|NP_985108.1| AER251Wp [Eremothecium gossypii] >g... 35 1.3
  gi|2492661|sp|Q12397|STCA_EMENI Putative sterigmatocystin biosyn... 35 1.4
  gi|32406286|ref|XP_323756.1| predicted protein [Neurospora crass... 34 1.6
  gi|6320570|ref|NP_010650.1| Protein involved in mating-type locu... 34 1.8
  gi|49096946|ref|XP_409933.1| hypothetical protein AN5796.2 [Aspe... 34 2.2
  gi|34393563|dbj|BAC83161.1| hypothetical protein [Oryza sativa (... 33 2.6
  gi|2599038|gb|AAC61649.1| T-cell receptor alpha chain VJ region ... 33 3.0
  gi|20129061|ref|NP_608344.1| CG14224-PA [Drosophila melanogaster... 33 3.1 LocusLink info
  gi|17569595|ref|NP_509948.1| predicted CDS, putative cytoplasmic... 33 3.1 LocusLink info
  gi|46435451|gb|EAK94832.1| hypothetical protein CaO19.2326 [Cand... 33 4.3
  gi|25395673|pir||A88397 protein H04J21.1 [imported] - Caenorhabd... 33 4.4
  gi|34907010|ref|NP_914852.1| putative ubiquitin-like protein [Or... 33 4.4
  gi|49067614|ref|XP_398097.1| hypothetical protein UM00482.1 [Ust... 33 5.1
  gi|45581705|tpg|DAA02252.1| TPA: RAS-like family 11 member B [Ra... 32 5.9 LocusLink info
  gi|34877259|ref|XP_223353.2| similar to 1190017B18Rik protein [R... 32 5.9 LocusLink info
  gi|23128759|ref|ZP_00110598.1| COG3206: Uncharacterized protein ... 32 6.2
  gi|17553844|ref|NP_497543.1| putative protein family member, wit... 32 7.5 LocusLink info
  gi|15239691|ref|NP_199682.1| ubiquitin-related [Arabidopsis thal... 32 7.7

Alignments
>gi|24649260|ref|NP_651134.1|  LocusLink info CG4449-PA [Drosophila melanogaster]
          Length = 424

 Score =  328 bits (842), Expect = 5e-89
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   PRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHL 60
           PRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHL
Sbjct: 220 PRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHL 279

Query: 61  FKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDY 120
           FKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDY
Sbjct: 280 FKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDY 339

Query: 121 NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD 180
           NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD
Sbjct: 340 NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD 399

Query: 181 LLDPNDTPNNQDMEGNEVIDLKIKA 205
           LLDPNDTPNNQDMEGNEVIDLKIKA
Sbjct: 400 LLDPNDTPNNQDMEGNEVIDLKIKA 424
>gi|21430264|gb|AAM50810.1|  LocusLink info LD33701p [Drosophila melanogaster]
          Length = 422

 Score =  327 bits (840), Expect = 7e-89
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   PRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHL 60
           PRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHL
Sbjct: 218 PRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHL 277

Query: 61  FKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDY 120
           FKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDY
Sbjct: 278 FKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDY 337

Query: 121 NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD 180
           NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD
Sbjct: 338 NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD 397

Query: 181 LLDPNDTPNNQDMEGNEVIDLKIKA 205
           LLDPNDTPNNQDMEGNEVIDLKIKA
Sbjct: 398 LLDPNDTPNNQDMEGNEVIDLKIKA 422
>gi|31200225|ref|XP_309060.1|   ENSANGP00000019625 [Anopheles gambiae]
          Length = 199

 Score =  286 bits (733), Expect = 2e-76
 Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 7   VNLDSEDE---GEKEAPPVVEEENI-FDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFK 62
           ++LDS+DE   G  E  P     N  F+ +N  + + + W   I+ +  R++QKF+ +F 
Sbjct: 1   ISLDSDDESGDGAVELEPSFSAANSSFETENYEMRIKIKWGRGIETFVHRRYQKFEDIFN 60

Query: 63  ELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNP 122
           +LA++   D   I +++    V   DTP SI  K    + G   K+       A    + 
Sbjct: 61  QLAAKESADRACIFLNLDDRIVYASDTPDSIDYKPHQFIAGRILKTKAPILPTA----HG 116

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
            +         +KVQ +K K PL + + K     ++ IKCAEEL C+P+ I+L+FDG+L+
Sbjct: 117 SSTGHNSNMITLKVQMEKRKQPLRLQIDKNQTMSVLVIKCAEELKCEPKDIRLYFDGELV 176

Query: 183 DPNDTPNNQDMEGNEVIDLK 202
             ND P + D+EG+E++D++
Sbjct: 177 GNNDKPEDLDLEGDEILDIR 196
>gi|11041477|dbj|BAB17279.1|   hypothetical protein [Macaca fascicularis]
          Length = 408

 Score =  190 bits (485), Expect = 1e-47
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 51  LRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHN 110
           LR  +  + +   +A+  G+  + I +      + P  TP ++ L               
Sbjct: 269 LRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGV------------A 316

Query: 111 NNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDP 170
           +      +  +PEA     ++ Q++VQ  +    L + + +    K +     E +    
Sbjct: 317 DIIDCVVLASSPEAT-ETSRQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSG 375

Query: 171 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           R +  FFDG  L   + P +  ME  ++I++
Sbjct: 376 RKLSFFFDGTKLSGRELPADLGMESGDLIEV 406

 Score = 45.0 bits (106), Expect = 0.001
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
            +      L   P+ F +K++       + +P++ ++  + +    A  L   P  I L 
Sbjct: 239 VVLVEGPTLPETPRLFPLKIRC--RADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLL 296

Query: 177 FDGDLLDPNDTPNNQDMEGNEVID 200
           F    L P  TP    +   ++ID
Sbjct: 297 FGETELSPTATPRTLKLGVADIID 320
>gi|21360814|gb|AAM49721.1|  LocusLink info hypothetical protein [Homo sapiens]
          Length = 419

 Score =  187 bits (476), Expect = 1e-46
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 51  LRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHN 110
           LR  +  + +   +A+  G+  + I +      + P  TP ++ L               
Sbjct: 280 LRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGV------------A 327

Query: 111 NNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDP 170
           +      +  +PEA     ++ Q++VQ  +    L + + +    K +     E +    
Sbjct: 328 DIIDCVVLTSSPEAT-ETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSG 386

Query: 171 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           R +  FFDG  L   + P +  ME  ++I++
Sbjct: 387 RKLSFFFDGTKLSGRELPADLGMESGDLIEV 417

 Score = 44.6 bits (105), Expect = 0.001
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
            +      L   P+ F +K++       + +P++ ++  + +    A  L   P  I L 
Sbjct: 250 VVLVEGPTLPETPRLFPLKIRC--RADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLL 307

Query: 177 FDGDLLDPNDTPNNQDMEGNEVID 200
           F    L P  TP    +   ++ID
Sbjct: 308 FGETELSPTATPRTLKLGVADIID 331
>gi|14042298|dbj|BAB55189.1|  LocusLink info unnamed protein product [Homo sapiens]
 gi|17390726|gb|AAH18311.1|  LocusLink info FLJ14639 protein [Homo sapiens]
 gi|18204286|gb|AAH21551.1|  LocusLink info FLJ14639 protein [Homo sapiens]
          Length = 138

 Score =  186 bits (474), Expect = 2e-46
 Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 13/149 (8%)

Query: 53  QHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNN 112
             +  + +   +A+  G+  + I +      + P  TP ++ L               + 
Sbjct: 1   MSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGV------------ADI 48

Query: 113 NVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRT 172
                +  +PEA     ++ Q++VQ  +    L + + +    K +     E +    R 
Sbjct: 49  IDCVVLTSSPEAT-ETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRK 107

Query: 173 IKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           +  FFDG  L   + P +  ME  ++I++
Sbjct: 108 LSFFFDGTKLSGRELPADLGMESGDLIEV 136
>gi|46447823|ref|NP_116204.3|  LocusLink info nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein [Homo
           sapiens]
          Length = 419

 Score =  186 bits (473), Expect = 3e-46
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 51  LRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHN 110
           LR  +  + +   +A+  G+  + I +      + P  TP ++ L               
Sbjct: 280 LRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGV------------A 327

Query: 111 NNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDP 170
           +      +  +PEA     ++ Q++VQ  +    L + + +    K +     E +    
Sbjct: 328 DIIDCVVLTSSPEAT-ETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSG 386

Query: 171 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           R +  FFDG  L   + P +  ME  ++I++
Sbjct: 387 RKLSFFFDGTKLSGRELPADLGMESGDLIEV 417

 Score = 44.6 bits (105), Expect = 0.001
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
            +      L   P+ F +K++       + +P++ ++  + +    A  L   P  I L 
Sbjct: 250 VVLVEGPTLPETPRLFPLKIRC--RADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLL 307

Query: 177 FDGDLLDPNDTPNNQDMEGNEVID 200
           F    L P  TP    +   ++ID
Sbjct: 308 FGETELSPTATPRTLKLGVADIID 331
>gi|39591579|emb|CAE71155.1|   Hypothetical protein CBG18011 [Caenorhabditis briggsae]
          Length = 322

 Score =  185 bits (470), Expect = 7e-46
 Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 15/158 (9%)

Query: 54  HQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFH-----TLTGHPTKS 108
           H  F  + KEL+ +     N++ +    N +G + TPH +G+  F             K 
Sbjct: 168 HSTFAEVRKELSLKWMCHFNEVHLMYNGNRIG-DVTPHELGIVPFQVPLPEFDAIREEKE 226

Query: 109 HNNNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNC 168
             +N ++ K+      +        +KVQ    K P+ + + +    + I  K  E L  
Sbjct: 227 RPSNVISPKVI----TIETVSDAISIKVQMKNRKKPIHLSVTEETTVEDIMKKVIESLAG 282

Query: 169 DP-----RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           D        +K  FD +  + + T  +  +E  + ID+
Sbjct: 283 DASIPSLSKMKAMFDDEYCENSQTCKDLGLEDADCIDI 320
>gi|45751566|gb|AAH68007.1|  LocusLink info FLJ14639 protein [Homo sapiens]
          Length = 127

 Score =  173 bits (439), Expect = 3e-42
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 13/138 (9%)

Query: 64  LASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPE 123
           +A+  G+  + I +      + P  TP ++ L               +      +  +PE
Sbjct: 1   MATHLGVSPSRILLLFGETELSPTATPRTLKLGV------------ADIIDCVVLTSSPE 48

Query: 124 ALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLD 183
           A     ++ Q++VQ  +    L + + +    K +     E +    R +  FFDG  L 
Sbjct: 49  AT-ETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGTKLS 107

Query: 184 PNDTPNNQDMEGNEVIDL 201
             + P +  ME  ++I++
Sbjct: 108 GRELPADLGMESGDLIEV 125
>gi|1747519|gb|AAC52963.1|  LocusLink info nuclear protein NIP45 [Mus musculus]
          Length = 412

 Score =  164 bits (415), Expect = 1e-39
 Identities = 25/150 (16%), Positives = 58/150 (38%), Gaps = 13/150 (8%)

Query: 52  RQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNN 111
           R  +  +++   +A+  G+  N I +    + + P  TP ++ L               +
Sbjct: 274 RMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGV------------AD 321

Query: 112 NNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR 171
                 +  + EA     ++ +++VQ  +    L I +      K++     E +     
Sbjct: 322 IIDCVVLASSSEAT-ETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGH 380

Query: 172 TIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
            +  FFDG  L   + P +  +E  ++I++
Sbjct: 381 KLSFFFDGTKLSGKELPADLGLESGDLIEV 410

 Score = 40.0 bits (93), Expect = 0.029
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
            +      L +  + F +K++       + +P++ ++  + +    A  L   P  I L 
Sbjct: 243 VVLVEGPVLPQSSRLFTLKIRC--RADLVRLPVRMSEPLQNVVDHMANHLGVSPNRILLL 300

Query: 177 FDGDLLDPNDTPNNQDMEGNEVID 200
           F    L P  TP+   +   ++ID
Sbjct: 301 FGESELSPTATPSTLKLGVADIID 324
>gi|33468909|ref|NP_035030.1|  LocusLink info nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein; nuclear
           factor of activated T-cells, cytoplasmic 2 interacting
           protein [Mus musculus]
 gi|26326089|dbj|BAC26788.1|  LocusLink info unnamed protein product [Mus musculus]
          Length = 412

 Score =  164 bits (415), Expect = 1e-39
 Identities = 25/150 (16%), Positives = 58/150 (38%), Gaps = 13/150 (8%)

Query: 52  RQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNN 111
           R  +  +++   +A+  G+  N I +    + + P  TP ++ L               +
Sbjct: 274 RMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGV------------AD 321

Query: 112 NNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR 171
                 +  + EA     ++ +++VQ  +    L I +      K++     E +     
Sbjct: 322 IIDCVVLASSSEAT-ETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGH 380

Query: 172 TIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
            +  FFDG  L   + P +  +E  ++I++
Sbjct: 381 KLSFFFDGTKLSGKELPADLGLESGDLIEV 410

 Score = 40.0 bits (93), Expect = 0.030
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
            +      L +  + F +K++       + +P++ ++  + +    A  L   P  I L 
Sbjct: 243 VVLVEGPVLPQSSRLFTLKIRC--RADLVRLPVRMSEPLQNVVDHMANHLGVSPNRILLL 300

Query: 177 FDGDLLDPNDTPNNQDMEGNEVID 200
           F    L P  TP+   +   ++ID
Sbjct: 301 FGESELSPTATPSTLKLGVADIID 324
>gi|12838793|dbj|BAB24331.1|  LocusLink info unnamed protein product [Mus musculus]
          Length = 416

 Score =  161 bits (409), Expect = 7e-39
 Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 13/150 (8%)

Query: 52  RQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNN 111
           R  +  +++   +A+  G+  N I +    + + P  TP ++ L               +
Sbjct: 278 RMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGV------------AD 325

Query: 112 NNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR 171
                 +  + EA     ++ +++VQ  +    L I +      K++     E +     
Sbjct: 326 IIDCVVLASSSEAT-ETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGH 384

Query: 172 TIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
            +  FFDG      + P +  +E  ++I++
Sbjct: 385 KLSFFFDGTNSSGKELPADLGLESGDLIEV 414

 Score = 40.4 bits (94), Expect = 0.021
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
            +      L +  + F +K++       + +P++ ++  + +    A  L   P  I L 
Sbjct: 247 VVLVEGPVLPQSSRLFTLKIRC--RADLVRLPVRMSEPLQNVVDHMANHLGVSPNRILLL 304

Query: 177 FDGDLLDPNDTPNNQDMEGNEVID 200
           F    L P  TP+   +   ++ID
Sbjct: 305 FGESELSPTATPSTLKLGVADIID 328
>gi|34860127|ref|XP_219329.2|  LocusLink info similar to nuclear protein NIP45 [Rattus norvegicus]
          Length = 414

 Score =  160 bits (406), Expect = 2e-38
 Identities = 24/150 (16%), Positives = 56/150 (37%), Gaps = 13/150 (8%)

Query: 52  RQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNN 111
           +  +  +++   +AS  G+  N I +      + P  TP ++ L               +
Sbjct: 276 KTSEPLQNVVDHMASHLGVSPNRILLLFGETELSPTATPRTLKLGV------------AD 323

Query: 112 NNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR 171
                 +  + E      ++ +++VQ  +    L I +      K++     E +     
Sbjct: 324 IIDCVVLASSSEDT-ETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGH 382

Query: 172 TIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
            +  FFDG  L   + P +  +E  ++I++
Sbjct: 383 KLSFFFDGTKLSGKELPTDLGLESGDLIEV 412
>gi|17554898|ref|NP_497960.1|  LocusLink info putative nuclear protein (3F783) [Caenorhabditis elegans]
 gi|7507059|pir||T24432   hypothetical protein T04A8.8 - Caenorhabditis elegans
 gi|3879349|emb|CAA84734.1|   Hypothetical protein T04A8.8 [Caenorhabditis elegans]
          Length = 328

 Score = 73.9 bits (181), Expect = 2e-12
 Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 13/155 (8%)

Query: 55  QKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNV 114
             F  + +  A++ G   + +        +    TP S+G +           S      
Sbjct: 177 STFSEIRRIYATKWGCPVSCVVFSHNGKTIDTYTTPQSLGWRPMTLPHPLIEASKEAGEP 236

Query: 115 AAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRT-- 172
           A         +   P  F +KV     + P+ +   K    + I  K  +    D     
Sbjct: 237 AEVF-----TIENSPDSFTIKVLLASRRKPVQVEAAKDTTIQEILQKVIDAFVEDKEENI 291

Query: 173 -----IKLFFDGDLL-DPNDTPNNQDMEGNEVIDL 201
                +K+ FD + + D N T    D+E ++ I++
Sbjct: 292 PSIESMKVVFDNERIKDVNITCEQLDLEDDDCIEV 326
>gi|37546495|ref|XP_168354.2|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
          Length = 160

 Score = 57.7 bits (139), Expect = 2e-07
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 78  ENNDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSVRQIRFRFDGQPINETD 136

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 137 TPAQLEMEDEDTIDV 151
>gi|2707597|gb|AAB92355.1|   nonstructural protein P125-2 [pestivirus type 1]
          Length = 239

 Score = 55.8 bits (134), Expect = 6e-07
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 69  ENNDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETD 127

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 128 TPAQLEMEDEDTIDV 142

 Score = 33.4 bits (76), Expect = 2.9
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 13  DEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDE 72
           DE  KE    V+ EN   ND+  ++VA      +Q +K+++H     L K    R G+  
Sbjct: 59  DEKPKEG---VKTEN---NDHINLKVAGQDGSVVQ-FKIKRHTPLSKLMKAYCERQGLSM 111

Query: 73  NDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYN 121
             I        +   DTP  + ++   T+     ++     V  KI  +
Sbjct: 112 RQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGGPAVCKKITEH 160
>gi|34912494|ref|NP_917594.1|   putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
 gi|18677110|dbj|BAB84837.1|   putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
 gi|20804797|dbj|BAB92481.1|   putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
          Length = 766

 Score = 55.4 bits (133), Expect = 6e-07
 Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 9/117 (7%)

Query: 85  GPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHP 144
             +D    +   +   +       H +      +D +PE      +K  V VQ     H 
Sbjct: 654 SADDFLEKLAQTARQKVEARIPTEHID------LDKSPER-HEAREKVVVTVQDKAGHHQ 706

Query: 145 LVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
             +   K + F  +F   A+++N     +   FDGD +D   TP +  +E  +++++
Sbjct: 707 FRLY--KDEKFGKLFRAYAKKVNLSVADLTFAFDGDKVDAESTPEDLGLEDEDMVEV 761

 Score = 32.7 bits (74), Expect = 4.9
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 49  YKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGL 95
           ++L + +KF  LF+  A +  +   D+T     + V  E TP  +GL
Sbjct: 707 FRLYKDEKFGKLFRAYAKKVNLSVADLTFAFDGDKVDAESTPEDLGL 753
>gi|21361388|ref|NP_008868.2|  LocusLink info SMT3 suppressor of mif two 3 homolog 2; SMT3 (suppressor of mif two
           3, yeast) homolog 2 [Homo sapiens]
 gi|14250087|gb|AAH08450.1|  LocusLink info SUMO2 protein [Homo sapiens]
          Length = 95

 Score = 54.2 bits (130), Expect = 2e-06
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 13  ENNNHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETD 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEMEDEDTIDV 86
>gi|28277282|gb|AAH45271.1|  LocusLink info Smt3h2-prov protein [Xenopus laevis]
          Length = 95

 Score = 53.9 bits (129), Expect = 2e-06
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 13  ENNDHINLKVAGQD-GSVVQFKIKRQTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETD 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEMEDEDTIDV 86
>gi|19111164|ref|NP_579932.1|  LocusLink info SMT3 (supressor of mif two, 3) homolog 2; SMT3 (supressor of mif
           two, 3) homolog 2 (S. cerevisiae) [Mus musculus]
 gi|19424298|ref|NP_598278.1|  LocusLink info SMT3 suppressor of mif two 3 homolog 2 [Rattus norvegicus]
 gi|20913673|ref|XP_122275.1|   SMT3 (supressor of mif two, 3) homolog 2 [Mus musculus]
 gi|27807481|ref|NP_777194.1|  LocusLink info ubiquitin-like protein SMT3B [Bos taurus]
 gi|47522794|ref|NP_999149.1|  LocusLink info MIF2 suppressor [Sus scrofa]
 gi|48429127|sp|P61958|SM32_PIG   Ubiquitin-like protein SMT3B (Sentrin 2) (MIF2 suppressor)
 gi|48429128|sp|P61959|SM32_RAT   Ubiquitin-like protein SMT3B (Sentrin 2)
 gi|48429129|sp|P61955|SM32_BOVIN   Ubiquitin-like protein SMT3B (Sentrin 2)
 gi|48429130|sp|P61956|SM32_HUMAN   Ubiquitin-like protein SMT3B (Sentrin 2) (HSMT3)
 gi|48429131|sp|P61957|SM32_MOUSE   Ubiquitin-like protein SMT3B (Sentrin 2)
 gi|2135401|pir||JC4760   SMT3 protein - human
 gi|1770519|emb|CAA67897.1|  LocusLink info SMT3B protein [Homo sapiens]
 gi|1888536|gb|AAB49682.1|  LocusLink info ubiquitin-like protein [Bos taurus]
 gi|5566606|gb|AAD45399.1|  LocusLink info MIF2 suppressor [Homo sapiens]
 gi|12849483|dbj|BAB28360.1|  LocusLink info unnamed protein product [Mus musculus]
 gi|16877005|gb|AAH16775.1|  LocusLink info SUMO2 protein [Homo sapiens]
 gi|17028412|gb|AAH17522.1|  LocusLink info Sumo2 protein [Mus musculus]
 gi|17467272|gb|AAL40136.1|  LocusLink info MIF2 suppressor [Mus musculus]
 gi|17467358|gb|AAL40163.1|  LocusLink info MIF2 suppressor [Sus scrofa]
 gi|17467395|gb|AAL40175.1|  LocusLink info MIF2 suppressor [Rattus norvegicus]
 gi|18490626|gb|AAH22340.1|  LocusLink info SUMO2 protein [Homo sapiens]
 gi|26351521|dbj|BAC39397.1|  LocusLink info unnamed protein product [Mus musculus]
 gi|34849732|gb|AAH58446.1|  LocusLink info Smt3h2 protein [Rattus norvegicus]
 gi|38541188|gb|AAH62713.1|  LocusLink info SUMO2 protein [Homo sapiens]
 gi|38570350|gb|AAR24618.1|   MIF2 suppressor [Cricetulus griseus]
 gi|46250410|gb|AAH68465.1|  LocusLink info SUMO2 protein [Homo sapiens]
 gi|47124500|gb|AAH70159.1|  LocusLink info SUMO2 protein [Homo sapiens]
 gi|47940079|gb|AAH71645.1|  LocusLink info SUMO2 protein [Homo sapiens]
 gi|47940469|gb|AAH71646.1|  LocusLink info SUMO2 protein [Homo sapiens]
          Length = 95

 Score = 53.9 bits (129), Expect = 2e-06
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 13  ENNDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETD 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEMEDEDTIDV 86
>gi|9910556|ref|NP_064313.1|  LocusLink info SMT3 (supressor of mif two, 3) homolog 1; SMT3 (supressor of mif
           two, 3) homolog 1 (S. cerevisiae) [Mus musculus]
 gi|23396871|sp|Q9Z172|SM31_MOUSE  LocusLink info Ubiquitin-like protein SMT3A
 gi|4091893|gb|AAC99333.1|  LocusLink info Smt3A protein [Mus musculus]
 gi|12849688|dbj|BAB28442.1|  LocusLink info unnamed protein product [Mus musculus]
 gi|12850124|dbj|BAB28601.1|  LocusLink info unnamed protein product [Mus musculus]
          Length = 110

 Score = 53.9 bits (129), Expect = 2e-06
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 67  NETDTPAQLEMEDEDTIDV 85
>gi|33304726|gb|AAP34642.1|   small ubiquitin-like modifier [Bigelowiella natans]
          Length = 90

 Score = 53.1 bits (127), Expect = 3e-06
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 123 EALCRKPKK-FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDL 181
           E   +KP +   +KV++      +   +KKT  FK +     +++  +  +++  FDGD 
Sbjct: 3   ETKDQKPNEHLNLKVKSQDGNE-VFFKVKKTTPFKRLMEAYCQKVGAEKSSVRFLFDGDR 61

Query: 182 LDPNDTPNNQDMEGNEVIDLKIK 204
           +  + TP + DM+  + ID  ++
Sbjct: 62  ISGDQTPADLDMQDEDEIDAMVQ 84
>gi|30584365|gb|AAP36431.1|   Homo sapiens SMT3 suppressor of mif two 3 homolog 1 (yeast)
           [synthetic construct]
          Length = 104

 Score = 53.1 bits (127), Expect = 4e-06
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 67  NETDTPAQLEMEDEDTIDV 85
>gi|47229942|emb|CAG10356.1|   unnamed protein product [Tetraodon nigroviridis]
          Length = 87

 Score = 53.1 bits (127), Expect = 4e-06
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 2   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLQIRQIRFRFDGQPI 60

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 61  NETDTPAQLEMEDEDTIDV 79
>gi|48928058|ref|NP_008867.2|  LocusLink info small ubiquitin-like modifier protein 3; SMT3 (suppressor of mif
           two 3, yeast) homolog 1 [Homo sapiens]
 gi|23503102|sp|P55854|SM31_HUMAN  LocusLink info Ubiquitin-like protein SMT3A
 gi|12652587|gb|AAH00036.1|  LocusLink info SUMO3 protein [Homo sapiens]
 gi|14250044|gb|AAH08420.1|  LocusLink info SUMO3 protein [Homo sapiens]
 gi|30582855|gb|AAP35654.1|   SMT3 suppressor of mif two 3 homolog 1 (yeast) [Homo sapiens]
          Length = 103

 Score = 52.7 bits (126), Expect = 4e-06
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 67  NETDTPAQLEMEDEDTIDV 85
>gi|49256565|gb|AAH72995.1|   Unknown (protein for MGC:82571) [Xenopus laevis]
          Length = 95

 Score = 52.7 bits (126), Expect = 5e-06
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 13  ENNDHINLKVAGQD-GSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETD 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEMEDEDTIDV 86
>gi|34849696|gb|AAH58303.1|  LocusLink info Zgc:65847 protein [Danio rerio]
 gi|46250368|gb|AAH68341.1|  LocusLink info Zgc:85643 protein [Danio rerio]
          Length = 94

 Score = 52.7 bits (126), Expect = 5e-06
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 67  NETDTPAQLEMEDEDTIDV 85
>gi|18408968|ref|NP_564924.1|   ubiquitin-related [Arabidopsis thaliana]
 gi|21554742|gb|AAM63677.1|   unknown [Arabidopsis thaliana]
          Length = 215

 Score = 51.5 bits (123), Expect = 1e-05
 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 106 TKSHNNNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEE 165
            +S N ++  A    +     R   K  + +Q    +  L +   +   F+ +     ++
Sbjct: 119 EESRNPSSETAAQLPSEPTNDRA--KIVITIQDKDGQKTLRVFADEK--FERVIKLYTDK 174

Query: 166 LNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDLKIK 204
              DP+ +   FDGD +DP+ TP+   ME +++I++  K
Sbjct: 175 AKLDPQNLVFIFDGDKIDPSTTPSELGMEDHDMIEVHTK 213

 Score = 33.4 bits (76), Expect = 2.8
 Identities = 13/78 (16%), Positives = 32/78 (41%)

Query: 31  NDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTP 90
           ND   I + +      +  ++   +KF+ + K    +  +D  ++      + + P  TP
Sbjct: 138 NDRAKIVITIQDKDGQKTLRVFADEKFERVIKLYTDKAKLDPQNLVFIFDGDKIDPSTTP 197

Query: 91  HSIGLKSFHTLTGHPTKS 108
             +G++    +  H  K+
Sbjct: 198 SELGMEDHDMIEVHTKKT 215
>gi|47214992|emb|CAG03132.1|   unnamed protein product [Tetraodon nigroviridis]
          Length = 93

 Score = 51.2 bits (122), Expect = 1e-05
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 123 EALCRKPKK-FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDL 181
           EA+  +  +   +KV        +   +K+      +     E      R I+  FDG  
Sbjct: 8   EAVKTESNEHINLKVAGQD-GSVVQFKIKRQTPLIKLMKAYCERQGLSMRQIRFRFDGQP 66

Query: 182 LDPNDTPNNQDMEGNEVIDL 201
           +   DTP   +ME  + ID+
Sbjct: 67  ISETDTPAGLEMEDEDTIDV 86
>gi|32450081|gb|AAH54172.1|  LocusLink info MGC64297 protein [Xenopus laevis]
          Length = 94

 Score = 51.2 bits (122), Expect = 1e-05
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     +      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 67  NETDTPAQLEMEDEDTIDV 85
>gi|1770517|emb|CAA67896.1|  LocusLink info SMT3A protein [Homo sapiens]
          Length = 103

 Score = 50.8 bits (121), Expect = 2e-05
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+  +   +     E      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTSLSKLMKAYCERQGLSMRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP    ME  + ID+
Sbjct: 67  NETDTPAQLRMEDEDTIDV 85
>gi|34866007|ref|XP_346731.1|  LocusLink info hypothetical protein XP_346730 [Rattus norvegicus]
          Length = 95

 Score = 50.4 bits (120), Expect = 2e-05
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +K         +   +K+      +     E      R I+  FDG  ++  D
Sbjct: 13  ENNDHINLKAVGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFEFDGQPINETD 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEMEDEDTIDV 86
>gi|42657694|ref|XP_376612.1|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
 gi|42658320|ref|XP_379834.1|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
          Length = 95

 Score = 48.8 bits (116), Expect = 6e-05
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +     ++     R I+  FDG  +   D
Sbjct: 13  ENNDHTNLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCKQQGLSMRQIRFRFDGQPIKETD 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEMENEDTIDV 86
>gi|38086507|ref|XP_355884.1|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Mus musculus]
          Length = 94

 Score = 48.8 bits (116), Expect = 6e-05
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
            +     +KV        +   +K+      +     E      R  +  FDG  ++  D
Sbjct: 12  TENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCEHQGLSMRQNRFRFDGQPINETD 70

Query: 187 TPNNQDMEGNEVIDL 201
           TP   D+E  + ID+
Sbjct: 71  TPAQLDIEDEDTIDV 85
>gi|47226342|emb|CAG09310.1|   unnamed protein product [Tetraodon nigroviridis]
          Length = 93

 Score = 48.8 bits (116), Expect = 7e-05
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 8   EGVKTENDHINLKVAGQD-GSVVQFKIKRHTALNKLMKAYCERQGLAMRQIRFRFDGQPI 66

Query: 183 DPNDTPNNQDMEGNEVIDL 201
           +  DTP   +ME  + ID+
Sbjct: 67  NETDTPAQLEMEDEDTIDV 85
>gi|20821491|ref|XP_143645.1|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Mus musculus]
          Length = 93

 Score = 48.5 bits (115), Expect = 8e-05
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV          +  K+  +   +     E      R I+  FDG  ++  D
Sbjct: 13  ENNDHINLKVSGQDGS---EVQFKRHTSLSKLMKTYCERQGLSMRQIRFRFDGQPINKTD 69

Query: 187 TPNNQDMEGNEVID 200
           TP   ++E  +  D
Sbjct: 70  TPAELNIEDEDTND 83
>gi|47218566|emb|CAG10265.1|   unnamed protein product [Tetraodon nigroviridis]
          Length = 94

 Score = 48.1 bits (114), Expect = 1e-04
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +    ++       T++  F+G  +  N TP   
Sbjct: 18  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYSQRQGVPASTLRFLFEGQRIADNQTPKEL 76

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 77  GMEDEDVIEV 86
>gi|19112827|ref|NP_596035.1|   ubiquitin-like modifier [Schizosaccharomyces pombe]
 gi|12644047|sp|O13351|SMT3_SCHPO   Ubiquitin-like protein smt3/pmt3
 gi|7493576|pir||T40313   ubiquitin-like modifier protein - fission yeast
           (Schizosaccharomyces pombe)
 gi|3510372|dbj|BAA32595.1|   Pmt3p [Schizosaccharomyces pombe]
 gi|5051479|emb|CAB44758.1|   pmt3 [Schizosaccharomyces pombe]
          Length = 117

 Score = 48.1 bits (114), Expect = 1e-04
 Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 10/103 (9%)

Query: 106 TKSHNNNNVAAKIDYNPEALCRKPKK--------FQVKVQADKWKHPLVIPMKKTDNFKI 157
                N + A K    P       ++          +KV        +   +KKT  F  
Sbjct: 3   ESPSANISDADKSAITP-TTGDTSQQDVKPSTEHINLKVVGQDNNE-VFFKIKKTTEFSK 60

Query: 158 IFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
           +             +++   DG+ + P+ TP   DME  + I+
Sbjct: 61  LMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIE 103
>gi|49086586|ref|XP_405328.1|   hypothetical protein AN1191.2 [Aspergillus nidulans FGSC A4]
 gi|40746628|gb|EAA65784.1|   hypothetical protein AN1191.2 [Aspergillus nidulans FGSC A4]
          Length = 94

 Score = 48.1 bits (114), Expect = 1e-04
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           +K+T   K +     +     P T++  FDG  + P DTP+  DM   + +++
Sbjct: 33  IKRTTTLKKLMDAFCDRQGKQPSTVRFLFDGTRVRPEDTPDTLDMADGDTLEV 85

 Score = 41.1 bits (96), Expect = 0.015
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 18  EAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITV 77
           EAP  VE  NI   DN   EV          +K+++    K L      R G   + +  
Sbjct: 10  EAPAPVEHLNIKVTDNNN-EV---------FFKIKRTTTLKKLMDAFCDRQGKQPSTVRF 59

Query: 78  DMYYNFVGPEDTPHSIGLKSFHTLTGHPTK 107
                 V PEDTP ++ +    TL  H  +
Sbjct: 60  LFDGTRVRPEDTPDTLDMADGDTLEVHQEQ 89
>gi|34869634|ref|XP_212687.2|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Rattus
           norvegicus]
          Length = 259

 Score = 48.1 bits (114), Expect = 1e-04
 Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+      +   C E      R  +  FDG      D
Sbjct: 164 ENNDHINLKVAGLD-GSVVQFKIKRHTPLSKLMKACCERQGLSTRQSRFRFDGQPFKETD 222

Query: 187 TPNNQDMEGNEVIDL 201
            P   +ME  + I +
Sbjct: 223 RPAQLEMEDEDTIGV 237
>gi|47211840|emb|CAF90473.1|   unnamed protein product [Tetraodon nigroviridis]
          Length = 97

 Score = 48.1 bits (114), Expect = 1e-04
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +    ++       T++  F+G  +  N TP   
Sbjct: 22  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYSQRQGVPASTLRFLFEGQRIADNQTPKEL 80

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 81  GMEDEDVIEV 90
>gi|46435317|gb|EAK94701.1|   hypothetical protein CaO19.670 [Candida albicans SC5314]
 gi|46435359|gb|EAK94742.1|   hypothetical protein CaO19.8287 [Candida albicans SC5314]
          Length = 102

 Score = 47.3 bits (112), Expect = 2e-04
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 126 CRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPN 185
             K     VKV        +   +K+   F+ +    A+     P T++   DG  +  +
Sbjct: 20  EEKGTHINVKVS--DGTQEVFFKVKRNTKFRRLMEAFAKRQGTSPDTMRFLVDGGRVHAD 77

Query: 186 DTPNNQDMEGNEVID 200
            TP + DM+  + I+
Sbjct: 78  QTPEDLDMDDGDTIE 92

 Score = 37.3 bits (86), Expect = 0.23
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 11  SEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGI 70
           S+ E    +PP   E    +     I V +S   +   +K++++ KF+ L +  A R G 
Sbjct: 2   SDTENTGGSPPA-AEAGPKEEKGTHINVKVSDGTQEVFFKVKRNTKFRRLMEAFAKRQGT 60

Query: 71  DENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGH 104
             + +   +    V  + TP  + +    T+  H
Sbjct: 61  SPDTMRFLVDGGRVHADQTPEDLDMDDGDTIEAH 94
>gi|39589515|emb|CAE74544.1|   Hypothetical protein CBG22301 [Caenorhabditis briggsae]
 gi|39598393|emb|CAE69086.1|   Hypothetical protein CBG15104 [Caenorhabditis briggsae]
          Length = 95

 Score = 46.9 bits (111), Expect = 2e-04
 Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 126 CRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPN 185
               +  ++KV        +   +K   +   +    A+       +++  FDG  ++  
Sbjct: 13  GDNAEYIKIKVVGQDSNE-VHFRVKFGTSMAKLKKSYADRTGVSVNSLRFLFDGRRINDE 71

Query: 186 DTPNNQDMEGNEVIDL 201
           DTP + +ME ++VI++
Sbjct: 72  DTPKSLEMEDDDVIEV 87
>gi|17508217|ref|NP_490842.1|  LocusLink info SUMO, small ubiquitin-like modifier, SUMO, small ubiquitin-like
           modifier SMO-1 (10.2 kD) (smo-1) [Caenorhabditis
           elegans]
 gi|2501447|sp|P55853|SMT3_CAEEL   Ubiquitin-like protein SMT3
 gi|7446815|pir||JC5582   SMT3 protein - Caenorhabditis elegans
 gi|1707420|emb|CAA67914.1|   ubiquitin-like protein [Caenorhabditis elegans]
 gi|2341095|gb|AAB67608.1|   ubiquitin-like protein [Caenorhabditis elegans]
 gi|13324997|gb|AAK18969.1|   Sumo (ubiquitin-related) homolog protein 1 [Caenorhabditis elegans]
          Length = 91

 Score = 46.5 bits (110), Expect = 4e-04
 Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 126 CRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPN 185
               +  ++KV        +   +K   +   +    A+       +++  FDG  ++ +
Sbjct: 9   GDNAEYIKIKVVGQDSNE-VHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDD 67

Query: 186 DTPNNQDMEGNEVIDL 201
           DTP   +ME ++VI++
Sbjct: 68  DTPKTLEMEDDDVIEV 83
>gi|6691508|dbj|BAA89293.1|   small ubiquitin-related protein 1 [Oncorhynchus mykiss]
          Length = 101

 Score = 46.2 bits (109), Expect = 4e-04
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +    ++       T++  F+G  +  N TP   
Sbjct: 22  IKLKVIGQDNSE-IHFKVKMTTHLKKLKESYSQRQGVHMSTLRFLFEGQRISDNHTPKEL 80

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 81  GMEDEDVIEV 90
>gi|7488638|pir||T09529   ubiquitin-like protein - chickpea
 gi|2558518|emb|CAA05079.1|   Ubiquitin-like protein [Cicer arietinum]
          Length = 115

 Score = 45.8 bits (108), Expect = 6e-04
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 110 NNNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCD 169
            N     + D  P           +KV+       +   +K+    K +     +  + D
Sbjct: 6   PNPTPNPEEDKKPNDAAH----INLKVKGQDGNE-VFFRIKRNTQLKKLMNAYCDRQSVD 60

Query: 170 PRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
             +I   FDG  L    TP+  DME  + ID
Sbjct: 61  LNSIAFLFDGRRLRAEQTPDELDMEDGDEID 91
>gi|23613081|ref|NP_703403.1|   ubiquitin-like protein, putative [Plasmodium falciparum 3D7]
 gi|23504543|emb|CAD51423.1|   ubiquitin-like protein, putative [Plasmodium falciparum 3D7]
          Length = 100

 Score = 45.4 bits (107), Expect = 7e-04
 Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 114 VAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTI 173
            +A  +     +  + +  QVKV++      +   +K+    + +       L      +
Sbjct: 5   DSAVNNNGSSPVNNQGEHIQVKVRSPDGAE-VFFKIKRKTKLEKLMEVYCNRLGQSMEAV 63

Query: 174 KLFFDGDLLDPNDTPNNQDMEGNEVIDLKIK 204
           +  +DGD +  ++TP    +E  +VID  ++
Sbjct: 64  RFLYDGDRIHGDNTPEQLGIEDGDVIDAMVQ 94
>gi|49079730|ref|XP_403478.1|   hypothetical protein UM05863.1 [Ustilago maydis 521]
 gi|46101575|gb|EAK86808.1|   hypothetical protein UM05863.1 [Ustilago maydis 521]
          Length = 93

 Score = 45.4 bits (107), Expect = 8e-04
 Identities = 15/56 (26%), Positives = 25/56 (44%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDLKIK 204
           +K+T     +    AE +     +++  FDG  +  NDT     ME  + ID  I+
Sbjct: 33  VKRTTKLSKLKKAYAERMGKPENSVRFIFDGQRIGDNDTAETLGMEDQDEIDAMIE 88
>gi|45199216|ref|NP_986245.1|   AFR697Cp [Eremothecium gossypii]
 gi|44985356|gb|AAS54069.1|   AFR697Cp [Eremothecium gossypii]
          Length = 92

 Score = 45.4 bits (107), Expect = 8e-04
 Identities = 13/52 (25%), Positives = 30/52 (57%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
           +K+T   + +    A+    +  +++  +DG  + P+ TP++ DME N++I+
Sbjct: 32  IKRTTPLRRLMEAFAKRQGKEMDSLRFLYDGVRIQPDQTPDDLDMEDNDIIE 83
>gi|11279016|pir||T43537   ubiquitin-like protein smt3 - fission yeast  (Schizosaccharomyces
           pombe)
 gi|2444268|gb|AAB71541.1|   ubiquitin-like protein; SpSmt3p [Schizosaccharomyces pombe]
          Length = 90

 Score = 45.4 bits (107), Expect = 9e-04
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV        +   +KKT  F  +             +++   DG+ + P+ TP   
Sbjct: 9   INLKVVGQDNNE-VFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAEL 67

Query: 192 DMEGNEVID 200
           DME  + I+
Sbjct: 68  DMEDGDQIE 76
>gi|1707372|emb|CAA67923.1|   ubiquitin-like protein [Arabidopsis thaliana]
          Length = 104

 Score = 45.0 bits (106), Expect = 0.001
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   K +     +  + D  +I   FDG  L    TP+  
Sbjct: 18  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDEL 76

Query: 192 DMEGNEVID 200
           DME  + ID
Sbjct: 77  DMEDGDEID 85
>gi|2501449|sp|P55857|SMT3_ORYSA   Ubiquitin-like protein SMT3
 gi|7446816|pir||T04102   smt3 protein - rice
 gi|1668773|emb|CAA67922.1|   ubiquitin-like protein [Oryza sativa]
 gi|18146762|dbj|BAB82439.1|   ubiquitin-related protein [Oryza sativa (japonica cultivar-group)]
 gi|19386713|dbj|BAB86095.1|   ubiquitin-like protein [Oryza sativa (japonica cultivar-group)]
          Length = 100

 Score = 45.0 bits (106), Expect = 0.001
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   K +     +  + D   I   FDG  L    TP+  
Sbjct: 21  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDEL 79

Query: 192 DMEGNEVID 200
           +ME  + ID
Sbjct: 80  EMEDGDEID 88
>gi|46108880|ref|XP_381498.1|   hypothetical protein FG01322.1 [Gibberella zeae PH-1]
 gi|42547788|gb|EAA70631.1|   hypothetical protein FG01322.1 [Gibberella zeae PH-1]
          Length = 98

 Score = 45.0 bits (106), Expect = 0.001
 Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 122 PEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDL 181
            E      +   +KV  +  +  +   +K+T   + +     E       +++  FDG  
Sbjct: 11  GEQAPANSEHLNIKVTDNNNE--VFFKIKRTTKLEKLMGAFCERQGKATSSVRFLFDGTR 68

Query: 182 LDPNDTPNNQDMEGNEVIDL 201
           + P DTP+  +M+  + +++
Sbjct: 69  VQPTDTPDALEMQDGDTLEV 88

 Score = 34.2 bits (78), Expect = 1.6
 Identities = 13/59 (22%), Positives = 25/59 (42%)

Query: 49  YKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTK 107
           +K+++  K + L      R G   + +        V P DTP ++ ++   TL  H  +
Sbjct: 34  FKIKRTTKLEKLMGAFCERQGKATSSVRFLFDGTRVQPTDTPDALEMQDGDTLEVHQEQ 92
>gi|48102954|ref|XP_392826.1|  LocusLink info similar to SUMO, small ubiquitin-like modifier, SUMO, small
           ubiquitin-like modifier SMO-1 (10.2 kD) (smo-1) [Apis
           mellifera]
          Length = 98

 Score = 45.0 bits (106), Expect = 0.001
 Identities = 13/74 (17%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 128 KPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDT 187
             +  ++KV  +     +   +K T     +    ++ +     +++  FDG  ++ ++T
Sbjct: 17  NSEYIKLKVVGNDSNE-IHFRVKMTTQMGKLKKSYSDRVGVPMTSLRFLFDGKRINDDET 75

Query: 188 PNNQDMEGNEVIDL 201
           P   +ME ++VI++
Sbjct: 76  PKQLEMENDDVIEV 89
>gi|8569260|pdb|1EUV|B  Related structures Chain B, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In
           Complex With Smt3, The Yeast Ortholog Of Sumo.
          Length = 86

 Score = 44.6 bits (105), Expect = 0.001
 Identities = 13/52 (25%), Positives = 28/52 (53%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
           +KKT   + +    A+    +  +++  +DG  +  + TP + DME N++I+
Sbjct: 27  IKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIE 78
>gi|6320718|ref|NP_010798.1|   may be involved in function and/or structure of the eukaryotic
           kinetochore homologous to SUMO-1; Smt3p [Saccharomyces
           cerevisiae]
 gi|2501450|sp|Q12306|SMT3_YEAST   Ubiquitin-like protein SMT3 precursor
 gi|2133144|pir||S63999   SMT3 protein - yeast (Saccharomyces cerevisiae)
 gi|20151196|pdb|1L2N|A  Related structures Chain A, Smt3 Solution Structure
 gi|881372|gb|AAB01675.1|   Smt3p
 gi|927779|gb|AAB64951.1|   suppressor of MIF2 mutations; CAI: 0.31 [Saccharomyces cerevisiae]
 gi|45270238|gb|AAS56500.1|   YDR510W [Saccharomyces cerevisiae]
          Length = 101

 Score = 44.6 bits (105), Expect = 0.001
 Identities = 13/52 (25%), Positives = 28/52 (53%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
           +KKT   + +    A+    +  +++  +DG  +  + TP + DME N++I+
Sbjct: 39  IKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIE 90
>gi|13386248|ref|NP_081946.1|  LocusLink info RIKEN cDNA 4933411G06 [Mus musculus]
 gi|12855681|dbj|BAB30417.1|  LocusLink info unnamed protein product [Mus musculus]
          Length = 117

 Score = 44.2 bits (104), Expect = 0.001
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 120 YNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDG 179
            +      K    +VKV  +     +   +K T   K +    +  L+    +++  F+G
Sbjct: 9   SSGVLEDEKKDVIKVKVIGEDRSE-IHFRLKMTTRLKKLKDSYSRRLDLSVNSLRFLFEG 67

Query: 180 DLLDPNDTPNNQDMEGNEVIDL 201
             +  + T     ME  +VI++
Sbjct: 68  QKIADDHTAEELGMEEEDVIEV 89
>gi|41151251|ref|XP_372870.1|  LocusLink info similar to Ubiquitin-like protein SMT3C precursor
           (Ubiquitin-homology domain protein PIC1) (Ubiquitin-like
           protein UBL1) (Ubiquitin-related protein SUMO-1) (GAP
           modifying protein 1) (GMP1) (Sentrin) [Homo sapiens]
          Length = 117

 Score = 44.2 bits (104), Expect = 0.001
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 124 ALCRKPKKFQ-----VKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFD 178
           +      K +     ++V        +   +K T   K +     +       +++  F+
Sbjct: 25  STEHLGDKIKDEDIKLRVIGQDSSE-IHFKVKMTTPLKKLKKSYCQRQGVPVNSLRFLFE 83

Query: 179 GDLLDPNDTPNNQDMEGNEVIDL 201
           G  +  N TP    ME  +VI++
Sbjct: 84  GQRIADNHTPEELGMEEEDVIEV 106
>gi|34907008|ref|NP_914851.1|   putative ubiquitin-like protein [Oryza sativa (japonica
           cultivar-group)]
 gi|19386771|dbj|BAB86152.1|   putative ubiquitin-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 101

 Score = 44.2 bits (104), Expect = 0.002
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   K +     +  + D ++I   FDG  L+   TP+  
Sbjct: 22  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDIKSIAFLFDGRRLNAEQTPDQL 80

Query: 192 DMEGNEVID 200
           +ME  + ID
Sbjct: 81  EMEDGDEID 89
>gi|15236885|ref|NP_194414.1|   ubiquitin-like protein (SMT3) [Arabidopsis thaliana]
 gi|21542462|sp|P55852|SMT3_ARATH   Ubiquitin-like protein SMT3
 gi|7446817|pir||T04807   SMT3 protein homolog F10M23.180 - Arabidopsis thaliana
 gi|4455207|emb|CAB36530.1|   ubiquitin-like protein [Arabidopsis thaliana]
 gi|7269536|emb|CAB79539.1|   ubiquitin-like protein [Arabidopsis thaliana]
 gi|18252867|gb|AAL62360.1|   ubiquitin-like protein [Arabidopsis thaliana]
 gi|21592529|gb|AAM64478.1|   ubiquitin-like protein [Arabidopsis thaliana]
 gi|22652842|gb|AAN03845.1|   small ubiquitin-like modifier 1 [Arabidopsis thaliana]
 gi|30725548|gb|AAP37796.1|   At4g26840 [Arabidopsis thaliana]
          Length = 100

 Score = 43.8 bits (103), Expect = 0.002
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   K +     +  + D  +I   FDG  L    TP+  
Sbjct: 18  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDEL 76

Query: 192 DMEGNEVID 200
           DME  + ID
Sbjct: 77  DMEDGDEID 85
>gi|17137634|ref|NP_477411.1|  LocusLink info CG4494-PA [Drosophila melanogaster]
 gi|4377732|gb|AAD19219.1|  LocusLink info ubiquitin-like protein SMT3 [Drosophila melanogaster]
 gi|6934292|gb|AAF31702.1|  LocusLink info Smt3 [Drosophila melanogaster]
 gi|7297204|gb|AAF52470.1|  LocusLink info CG4494-PA [Drosophila melanogaster]
 gi|16768838|gb|AAL28638.1|  LocusLink info LD07775p [Drosophila melanogaster]
          Length = 90

 Score = 43.8 bits (103), Expect = 0.002
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV        +   +KK    + +     +      + ++  FDG  ++ NDTP + 
Sbjct: 13  INLKVLGQD-NAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSL 71

Query: 192 DMEGNEVIDL 201
           +ME  + I++
Sbjct: 72  EMEEGDTIEV 81
>gi|41351308|gb|AAH65723.1|   Unknown (protein for MGC:71987) [Homo sapiens]
          Length = 101

 Score = 43.8 bits (103), Expect = 0.002
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 124 ALCRKPKKFQ-----VKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFD 178
           +      K +     ++V        +   +K T   K +     +       +++  F+
Sbjct: 9   STEHLGDKIKDEDIKLRVIGQDSSE-IHFKVKMTTPLKKLKKSYCQRQGVPVNSLRFLFE 67

Query: 179 GDLLDPNDTPNNQDMEGNEVIDL 201
           G  +  N TP    ME  +VI++
Sbjct: 68  GQRIADNHTPEELGMEEEDVIEV 90
>gi|20386038|gb|AAM21559.1|   small ubiquitin-like protein [Dictyostelium discoideum]
          Length = 98

 Score = 42.7 bits (100), Expect = 0.005
 Identities = 12/52 (23%), Positives = 24/52 (46%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
           +K++   K +     +    +  + +  FDG  +  + TPN   ME  +V+D
Sbjct: 37  IKRSTPLKKLMEAYCQRQGLNYASCRFLFDGVRVKEDATPNQLGMENEDVLD 88
>gi|20983024|ref|XP_125372.1|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Mus musculus]
          Length = 94

 Score = 42.7 bits (100), Expect = 0.005
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
            K     +KV        +   +K+      +     E      R I+  FDG  ++   
Sbjct: 13  EKKDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAHCERQGLSMRRIRFRFDGQPINETG 71

Query: 187 TPNNQDMEGNEVIDL 201
           TP   +ME  + ID+
Sbjct: 72  TPAQLEME-EDTIDV 85
>gi|15240471|ref|NP_200327.1|   small ubiquitin-like modifier 2 (SUMO) [Arabidopsis thaliana]
 gi|9758113|dbj|BAB08585.1|   ubiquitin-like protein SMT3-like [Arabidopsis thaliana]
 gi|19715611|gb|AAL91628.1|   AT5g55160/MCO15_11 [Arabidopsis thaliana]
 gi|21360423|gb|AAM47327.1|   AT5g55160/MCO15_11 [Arabidopsis thaliana]
 gi|21537401|gb|AAM61742.1|   ubiquitin-like protein SMT3-like [Arabidopsis thaliana]
 gi|22652844|gb|AAN03846.1|   small ubiquitin-like modifier 2 [Arabidopsis thaliana]
          Length = 103

 Score = 42.3 bits (99), Expect = 0.006
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   K +     +  + D  +I   FDG  L    TP+  
Sbjct: 17  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDEL 75

Query: 192 DMEGNEVID 200
           +ME  + ID
Sbjct: 76  EMEDGDEID 84

 Score = 35.7 bits (82), Expect = 0.56
 Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 36 IEVALSWLGEIQIY-KLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIG 94
          I + +      +++ ++++  + K L      R  +D N I        +  E TP  + 
Sbjct: 17 INLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELE 76

Query: 95 L 95
          +
Sbjct: 77 M 77
>gi|38092027|ref|XP_110945.2|  LocusLink info similar to SMT3 suppressor of mif two 3 homolog 2 [Mus musculus]
          Length = 100

 Score = 42.3 bits (99), Expect = 0.007
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPND 186
                  +KV        +   +K+  +   +     E      R I+ +FDG  ++  D
Sbjct: 18  ENNDHINLKVAGQD-GFVVQCKIKRRTSLSKLMKAYCEWQGLSKRQIRFWFDGQPINETD 76

Query: 187 TPNNQDMEGNEVIDL 201
           +    ++E  ++ID+
Sbjct: 77  SLGQWEIEDEDMIDV 91
>gi|46228698|gb|EAK89568.1|   similar to ubiquitin-like protein SMT3 (SUMO), Pf besthit 23613081,
           transcripts identified by EST [Cryptosporidium parvum]
          Length = 122

 Score = 41.9 bits (98), Expect = 0.008
 Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 116 AKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKL 175
             ID          +   VKV++   +  L   +KK    + +     +    + ++I+ 
Sbjct: 27  PVIDQGTGGASDDSQYVTVKVRSPDGEQVLY-RIKKKTRLQKLMNSFCQRTGQNEQSIRF 85

Query: 176 FFDGDLLDPNDTPNNQDMEGNEVIDLKI 203
            F+G+ L P  T  +  ++  ++ID  I
Sbjct: 86  LFEGERLRPEMTAEDAGLQEGDLIDAMI 113
>gi|32420039|ref|XP_330463.1|   hypothetical protein [Neurospora crassa]
 gi|28925836|gb|EAA34837.1|   hypothetical protein [Neurospora crassa]
          Length = 99

 Score = 41.9 bits (98), Expect = 0.008
 Identities = 9/53 (16%), Positives = 26/53 (49%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           +K++   + +     E       +++  F+G  + P DTP+  +M+  + +++
Sbjct: 39  IKRSTKLEKLMTAFCERQGKTLASVRFLFEGQRVQPTDTPDTLEMQDGDCLEV 91

 Score = 36.9 bits (85), Expect = 0.29
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 10/97 (10%)

Query: 11  SEDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGI 70
           S + G   A P VE  NI   DN   EV          +K+++  K + L      R G 
Sbjct: 9   SGNAGSDAAAPAVEHLNIKVTDNNN-EV---------FFKIKRSTKLEKLMTAFCERQGK 58

Query: 71  DENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTK 107
               +        V P DTP ++ ++    L  H  +
Sbjct: 59  TLASVRFLFEGQRVQPTDTPDTLEMQDGDCLEVHQEQ 95
>gi|20386084|gb|AAM21576.1|   ubiquitin-like protein SMT3 [Phaseolus vulgaris]
          Length = 89

 Score = 41.9 bits (98), Expect = 0.008
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   K +     +  + D  +I   FDG  L    TP+  
Sbjct: 11  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDEL 69

Query: 192 DMEGNEVID 200
           +ME  + ID
Sbjct: 70  EMEDGDEID 78

 Score = 35.4 bits (81), Expect = 0.69
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 49 YKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGL 95
          +++++  + K L      R  +D N I        +  E TP  + +
Sbjct: 25 FRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEM 71
>gi|34876663|ref|XP_217413.2|  LocusLink info similar to Chain  , Structure Determination Of The Small
           Ubiquitin-Related Modifier Sumo-1, Nmr, 10 Structures
           [Rattus norvegicus]
          Length = 196

 Score = 41.9 bits (98), Expect = 0.009
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +     +       +++  F+G  +  N TP   
Sbjct: 117 IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL 175

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 176 GMEEEDVIEV 185
>gi|33604214|gb|AAH56283.1|  LocusLink info Zgc:65934 protein [Danio rerio]
 gi|45709326|gb|AAH67553.1|  LocusLink info Zgc:85634 protein [Danio rerio]
          Length = 100

 Score = 41.5 bits (97), Expect = 0.011
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +    ++       +++  F+G  +  N TP   
Sbjct: 21  IKLKVIGQDNSE-IHFKVKMTTHLKKLKESYSQRQGVPVNSLRFLFEGQRITDNLTPKEL 79

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 80  GMEDEDVIEV 89
>gi|2791892|emb|CAB09807.1|  LocusLink info SUMO-1 protein [Xenopus laevis]
          Length = 102

 Score = 41.5 bits (97), Expect = 0.011
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 130 KKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPN 189
              ++KV        +   +K T + K +     +       +++  F+G  +  + TP 
Sbjct: 21  DYIKLKVIGQDSSE-IHFKVKMTTHLKKLKESYRQRQGVPMNSLRFLFEGQRISDHQTPK 79

Query: 190 NQDMEGNEVIDL 201
              ME  +VI++
Sbjct: 80  ELGMEEEDVIEV 91
>gi|34852367|ref|XP_215371.2|  LocusLink info similar to ubiquitin-conjugating enzyme E2G 2;
           ubiquitin-conjugating enzyme 7 homolog [Rattus
           norvegicus]
          Length = 326

 Score = 41.5 bits (97), Expect = 0.012
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 123 EALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLL 182
           E +  +     +KV        +   +K+      +     E      R I+  FDG  +
Sbjct: 36  EGVKTENDHINLKVAGQD-GSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPI 94

Query: 183 DPNDTPN 189
           +  DTP 
Sbjct: 95  NETDTPA 101

 Score = 35.4 bits (81), Expect = 0.69
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 30  DNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDT 89
           +ND+  ++VA      +Q +K+++H     L K    R G+    I        +   DT
Sbjct: 41  ENDHINLKVAGQDGSVVQ-FKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDT 99

Query: 90  PHSIGLKSFHTLTGHPTKSHNN 111
           P          L+G P ++ + 
Sbjct: 100 PAQRKTNPSEPLSGTPRRATSP 121
>gi|15240472|ref|NP_200328.1|   small ubiquitin-like modifier 3 (SUMO) [Arabidopsis thaliana]
 gi|9758114|dbj|BAB08586.1|   ubiquitin-like protein [Arabidopsis thaliana]
 gi|22652846|gb|AAN03847.1|   small ubiquitin-like modifier 3 [Arabidopsis thaliana]
          Length = 111

 Score = 41.1 bits (96), Expect = 0.014
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 150 KKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVID 200
           KK+   K +     +            F+G  +   +TP+  DME  +VID
Sbjct: 35  KKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARIGGLETPDELDMEDGDVID 85
>gi|6433950|emb|CAB60728.1|   SUMO protein [Lycopersicon esculentum]
          Length = 105

 Score = 41.1 bits (96), Expect = 0.016
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
             +KV+       +   +K++   + +     +  + D  +I   FDG  L    TP+  
Sbjct: 21  INLKVKGQDGNE-VFFRIKRSTQMRKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDEL 79

Query: 192 DMEGNEVID 200
           +ME  + ID
Sbjct: 80  EMEEGDEID 88
>gi|42490984|gb|AAH66306.1|  LocusLink info SUMO1 protein [Homo sapiens]
          Length = 101

 Score = 40.8 bits (95), Expect = 0.020
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +     +       +++  F+G  +  N+TP   
Sbjct: 22  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNNTPKEL 80

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 81  GMEEEDVIEV 90
>gi|3892023|pdb|1A5R|   Related structures Structure Determination Of The Small Ubiquitin-Related Modifier
           Sumo-1, Nmr, 10 Structures
          Length = 103

 Score = 40.4 bits (94), Expect = 0.021
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +     +       +++  F+G  +  N TP   
Sbjct: 24  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL 82

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 83  GMEEEDVIEV 92
>gi|29247808|gb|EAA39359.1|   GLP_336_5901_6209 [Giardia lamblia ATCC 50803]
          Length = 102

 Score = 40.4 bits (94), Expect = 0.025
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 114 VAAKIDYNPEA--LCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR 171
               I+  PEA     + +K  +KV  D+ ++ +   +K T     +F     + +    
Sbjct: 6   DVPPIERKPEAEVKPEQAQKIMIKVS-DEHENAICFKVKMTTALSKVFDAYCSKNSLQRG 64

Query: 172 TIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
            ++ +F+G  +    TP + DM  N++I++
Sbjct: 65  DVRFYFNGARVSDTATPKSLDMAENDIIEV 94

 Score = 36.5 bits (84), Expect = 0.37
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 1/85 (1%)

Query: 12 EDEGEKEAPPVVEEENIFDNDNPTIEVALSWLGEIQI-YKLRQHQKFKHLFKELASRNGI 70
          +DEG+        E  +       I + +S   E  I +K++       +F    S+N +
Sbjct: 2  DDEGDVPPIERKPEAEVKPEQAQKIMIKVSDEHENAICFKVKMTTALSKVFDAYCSKNSL 61

Query: 71 DENDITVDMYYNFVGPEDTPHSIGL 95
             D+        V    TP S+ +
Sbjct: 62 QRGDVRFYFNGARVSDTATPKSLDM 86
>gi|4507801|ref|NP_003343.1|  LocusLink info SMT3 suppressor of mif two 3 homolog 1; Ubiquitin-like 1; sentrin;
           ubiquitin-like 1, 12kD; ubiquitin-like 1 (sentrin) [Homo
           sapiens]
 gi|6678489|ref|NP_033486.1|  LocusLink info SMT3 suppressor of mif two 3 homolog 1; ubiquitin-like 1 [Mus
           musculus]
 gi|2501446|sp|Q93068|SM33_HUMAN  LocusLink info Ubiquitin-like protein SMT3C precursor (Ubiquitin-homology domain
           protein PIC1) (Ubiquitin-like protein UBL1)
           (Ubiquitin-related protein SUMO-1) (GAP modifying
           protein 1) (GMP1) (Sentrin)
 gi|1518694|gb|AAB40388.1|  LocusLink info ubiquitin-homology domain protein PIC1
 gi|1574948|gb|AAC50733.1|  LocusLink info similar to ubiquitin and to yeast Smt3p (suppressor of MIF2);
           Method: conceptual translation supplied by author
 gi|1703503|gb|AAB40390.1|  LocusLink info gap modifying protein 1 [Homo sapiens]
 gi|1762973|gb|AAC50996.1|  LocusLink info SUMO-1 [Homo sapiens]
 gi|1769602|gb|AAB39999.1|  LocusLink info sentrin [Homo sapiens]
 gi|1770521|emb|CAA67898.1|  LocusLink info SMT3C protein [Homo sapiens]
 gi|2645737|gb|AAC39959.1|  LocusLink info ubiquitin-homology domain protein [Mus musculus]
 gi|12832591|dbj|BAB22172.1|  LocusLink info unnamed protein product [Mus musculus]
 gi|12846959|dbj|BAB27379.1|  LocusLink info unnamed protein product [Mus musculus]
 gi|13623671|gb|AAH06462.1|  LocusLink info SUMO1 protein [Homo sapiens]
 gi|21104414|dbj|BAB93477.1|  LocusLink info ubiquitin-homology domain protein PIC1 [Homo sapiens]
 gi|26354222|dbj|BAC40739.1|  LocusLink info unnamed protein product [Mus musculus]
 gi|30582103|gb|AAP35278.1|   ubiquitin-like 1 (sentrin) [Homo sapiens]
 gi|31565512|gb|AAH53528.1|  LocusLink info SUMO1 protein [Homo sapiens]
          Length = 101

 Score = 40.4 bits (94), Expect = 0.025
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +     +       +++  F+G  +  N TP   
Sbjct: 22  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL 80

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 81  GMEEEDVIEV 90
>gi|9664277|gb|AAF97049.1|   sentrin [Cervus nippon]
          Length = 101

 Score = 40.4 bits (94), Expect = 0.026
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +     +       +++  F+G  +  N TP   
Sbjct: 22  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL 80

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 81  GMEEEDVIEV 90
>gi|45383836|ref|NP_989466.1|  LocusLink info ubiquitin-like 1 (sentrin) [Gallus gallus]
 gi|19110797|gb|AAL85281.1|  LocusLink info sentrin [Gallus gallus]
          Length = 101

 Score = 40.4 bits (94), Expect = 0.026
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQ 191
            ++KV        +   +K T + K +     +       +++  F+G  +  N TP   
Sbjct: 22  IKLKVIGQDSSE-IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRITDNHTPKEL 80

Query: 192 DMEGNEVIDL 201
            ME  +VI++
Sbjct: 81  GMEEEDVIEV 90
>gi|41617348|tpg|DAA02613.1|   TPA: HDC07231 [Drosophila melanogaster]
          Length = 79

 Score = 40.0 bits (93), Expect = 0.033
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 145 LVIPMKKTDNFKIIFI-KCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           L   ++       +   K A+       ++ L FDG+ +   DT ++  ME N+++D+
Sbjct: 18  LRCHVRTDQPLAALLRQKYAQAFGVATESLILAFDGEKIQEEDTFDSLAMEDNDIVDV 75
>gi|38109015|gb|EAA54946.1|   hypothetical protein MG05737.4 [Magnaporthe grisea 70-15]
          Length = 109

 Score = 39.6 bits (92), Expect = 0.043
 Identities = 9/53 (16%), Positives = 24/53 (45%)

Query: 149 MKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           +K++   + +     +        ++  FDG  + P DTP+  +M   + +++
Sbjct: 49  IKRSTKLEKLMNAFCDRQGKSLSQVRFLFDGQRVQPTDTPDTLEMADGDTLEV 101

 Score = 38.8 bits (90), Expect = 0.069
 Identities = 13/59 (22%), Positives = 24/59 (40%)

Query: 49  YKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTK 107
           +K+++  K + L      R G   + +        V P DTP ++ +    TL  H  +
Sbjct: 47  FKIKRSTKLEKLMNAFCDRQGKSLSQVRFLFDGQRVQPTDTPDTLEMADGDTLEVHQEQ 105
>gi|19112787|ref|NP_595995.1|   hypothetical protein [Schizosaccharomyces pombe]
 gi|7491455|pir||T39786   hypothetical protein SPBC1921.02 - fission yeast
           (Schizosaccharomyces pombe)
 gi|6090556|emb|CAB58968.1|   SPBC1921.02 [Schizosaccharomyces pombe]
 gi|22255351|dbj|BAC07534.1|   dna repair protein Rad60p [Schizosaccharomyces pombe]
          Length = 406

 Score = 39.2 bits (91), Expect = 0.060
 Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 13/163 (7%)

Query: 49  YKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIG-LKSFHTLTGH--- 104
           +K++ +Q+F+ +    + R  +D  ++ +      +    TP   G LK    L  H   
Sbjct: 244 FKVKSNQQFRRVRIAYSERKKVD--NVVLVFQNQRLWDYGTPKGAGMLKVDTRLVVHAYC 301

Query: 105 ----PTKSHNNNNVAAKIDYNPE-ALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIF 159
                +          K+    E +  +  K   + +++ K    L + +      K + 
Sbjct: 302 HSDFISLKRIKELEVEKLSSVTEDSTAQTCKLITLLLRSSK-SEDLRLSIPVDFTVKDLI 360

Query: 160 IKCAEELNCD-PRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
            +   E+       I+L F+G+ LDPND   + ++E  + + +
Sbjct: 361 KRYCTEVKISFHERIRLEFEGEWLDPNDQVQSTELEDEDQVSV 403
>gi|39580526|emb|CAE66529.1|   Hypothetical protein CBG11828 [Caenorhabditis briggsae]
          Length = 55

 Score = 38.4 bits (89), Expect = 0.089
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 160 IKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
              A+       +++  FDG  ++  DTP   ++E ++VI++
Sbjct: 6   KSYADRAGGSINSLRFLFDGRRINDEDTPKTLEIEDDDVIEV 47
>gi|398985|sp|Q01802|AATM_YEAST   Aspartate aminotransferase, mitochondrial precursor (Transaminase
           A)
 gi|3318|emb|CAA48188.1|   aspartate aminotransferase [Saccharomyces cerevisiae]
          Length = 451

 Score = 38.1 bits (88), Expect = 0.14
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 35  TIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIG 94
             ++   W  ++     R H   + +F  L   + ++        YY    P+     + 
Sbjct: 353 DFKLKQQWFKDVDFMVQRLHHVRQEMFDRLGWPDLVNFAQQHGMFYYTRFSPKQV-EILR 411

Query: 95  LKSFHTLTGHPTKSHNNNNVAAKIDYNPEALCRKPKK 131
             SF  LTG    S +  N +  +DY  E+L    K 
Sbjct: 412 NNSFVYLTGDGRLSLSGVNDS-NVDYLCESLEAVSKM 447
>gi|34393565|dbj|BAC83163.1|   unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 110

 Score = 36.1 bits (83), Expect = 0.40
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 174 KLFFDGDLLDPNDTPNNQDMEGNEVID 200
           +  +DG  L    TP   DME  + +D
Sbjct: 74  RFLYDGRRLSGWQTPAELDMEDGDEVD 100
>gi|45916443|ref|ZP_00197496.1|   COG3664: Beta-xylosidase [Mesorhizobium sp. BNC1]
          Length = 305

 Score = 36.1 bits (83), Expect = 0.46
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 1/107 (0%)

Query: 18  EAPPVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITV 77
           E  P       F  ++P ++ A+SW+  + +  LR    +   F+  A      + +   
Sbjct: 192 ECTPEFGLCQWFHFEDPRLDEAVSWMRRLGVKYLRTGLSWADSFRPGALDWFDRQMEALA 251

Query: 78  DMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPEA 124
           D     V    TP   G+   HT      +   +        Y  +A
Sbjct: 252 DFDVT-VTFCFTPEHRGIAPHHTSAPQVPQEFADFCATMIERYAGKA 297
>gi|6322743|ref|NP_012816.1|   Mitochondrial aspartate aminotransferase, catalyzes the conversion
           of oxaloacetate to aspartate in aspartate and asparagine
           biosynthesis; Aat1p [Saccharomyces cerevisiae]
 gi|539084|pir||S37933   aspartate transaminase (EC 2.6.1.1) precursor, mitochondrial -
           yeast (Saccharomyces cerevisiae)
 gi|431210|emb|CAA50451.1|   aspartate aminotransferase [Saccharomyces cerevisiae]
 gi|486260|emb|CAA81946.1|   AAT1 [Saccharomyces cerevisiae]
          Length = 451

 Score = 36.1 bits (83), Expect = 0.49
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 2/97 (2%)

Query: 35  TIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIG 94
             ++   W  ++     R H   + +F  L   + ++        YY    P+     + 
Sbjct: 353 DFKLKQQWFKDVDFMVQRLHHVRQEMFDRLGWPDLVNFAQQHGMFYYTRFSPKQV-EILR 411

Query: 95  LKSFHTLTGHPTKSHNNNNVAAKIDYNPEALCRKPKK 131
              F  LTG    S +  N +  +DY  E+L    K 
Sbjct: 412 NNYFVYLTGDGRLSLSGVNDS-NVDYLCESLEAVSKM 447
>gi|46228280|gb|EAK89179.1|   hypothetical protein cgd3_900 [Cryptosporidium parvum]
          Length = 214

 Score = 36.1 bits (83), Expect = 0.52
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 123 EALCRKPKKFQVKVQADKWK-------HPLVIPMKKTDNFKIIFIKCAEELNCDPRT--- 172
           E   R+    ++ V+  K K         LV+ + + D  K +    ++ LN  P     
Sbjct: 115 EDEEREKSVIKLNVKVYKRKESDIIVIKTLVVALYRNDLVKKLVTYISKNLNPKPEKYLE 174

Query: 173 -IKLFFDGDLLDPNDTPNNQDMEGNEVIDLKI 203
            IK++FDGD ++         +E  E +++K+
Sbjct: 175 DIKVYFDGDCVNMEMEIKEIGIEDEEQLEVKV 206
>gi|7486092|pir||T00792   hypothetical protein At2g32760 [imported] - Arabidopsis thaliana
          Length = 380

 Score = 35.7 bits (82), Expect = 0.65
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 121 NPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGD 180
           +PE       K  +KV+  +    L   +    + K +      + N D  +++  ++G 
Sbjct: 291 SPETSPHM--KVTLKVKNQQGAEDLY-KIGTHAHLKKLMSAYCTKRNLDYSSVRFVYNGR 347

Query: 181 LLDPNDTPNNQDMEGNEVI 199
            +    TP    ME  + I
Sbjct: 348 EIKARQTPAQLHMEEEDEI 366
>gi|38106095|gb|EAA52445.1|   hypothetical protein MG05137.4 [Magnaporthe grisea 70-15]
          Length = 511

 Score = 35.7 bits (82), Expect = 0.67
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 126 CRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDP-RTIKLFFDGDLLDP 184
            +  +K ++ ++A      +    K       +             + + + FDGD L  
Sbjct: 433 GKSSEKIRIFLKAKNLDQ-VKASAKADTEISELVAAFRNVRKIPADKQVVIMFDGDKLAE 491

Query: 185 NDTPNNQDMEGNEVIDLKIK 204
            DT  +  +E  +V+D+ IK
Sbjct: 492 TDTVGDAGIEDKDVVDVLIK 511
>gi|19074488|ref|NP_585994.1|   UBIQUITIN-LIKE PROTEIN [Encephalitozoon cuniculi]
 gi|19069130|emb|CAD25598.1|   UBIQUITIN-LIKE PROTEIN [Encephalitozoon cuniculi]
          Length = 100

 Score = 35.4 bits (81), Expect = 0.69
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 126 CRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPN 185
               KK  +++  D+    LV  +K +  FK I    +  +  +    ++ F+G  +D  
Sbjct: 19  GAISKKVPLRL-VDQDGTTLVFNVKLSTTFKKILDAFSRNVGKNSSEFRILFNGKNIDLG 77

Query: 186 DTPNNQDMEGNEVIDL 201
            TP +   EGNE +++
Sbjct: 78  KTPGDFGFEGNEELEV 93
>gi|18403073|ref|NP_565752.1|   small ubiquitin-like modifier 5 (SUMO) [Arabidopsis thaliana]
 gi|17381257|gb|AAL36047.1|   At2g32760/F24L7.10 [Arabidopsis thaliana]
 gi|20197060|gb|AAM14900.1|   Expressed protein [Arabidopsis thaliana]
 gi|20453371|gb|AAM19924.1|   At2g32760/F24L7.10 [Arabidopsis thaliana]
 gi|21592622|gb|AAM64571.1|   unknown [Arabidopsis thaliana]
 gi|22652848|gb|AAN03848.1|   small ubiquitin-like modifier 5 [Arabidopsis thaliana]
          Length = 108

 Score = 35.4 bits (81), Expect = 0.84
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 117 KIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLF 176
           K   +PE       K  +KV+  +    L   +    + K +      + N D  +++  
Sbjct: 15  KKSRSPETSPHM--KVTLKVKNQQGAEDLY-KIGTHAHLKKLMSAYCTKRNLDYSSVRFV 71

Query: 177 FDGDLLDPNDTPNNQDMEGNEVI 199
           ++G  +    TP    ME  + I
Sbjct: 72  YNGREIKARQTPAQLHMEEEDEI 94
>gi|23619122|ref|NP_705084.1|   hypothetical protein [Plasmodium falciparum 3D7]
 gi|23615329|emb|CAD52320.1|   hypothetical protein [Plasmodium falciparum 3D7]
          Length = 624

 Score = 35.0 bits (80), Expect = 0.90
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 147 IPMKKTDNFKIIFIKCAEELNCDPRTI---KLFFDGDLLDPNDT------PNNQDMEGNE 197
           + + K   F  + +K           I   K+FFDGDL D N +       N   +E   
Sbjct: 528 VVINKNKTFGDLALKLGHTFKLSDDKIENIKMFFDGDLCDKNMSFGKDSYNNELGLEDGY 587

Query: 198 VIDLK 202
            ID+K
Sbjct: 588 QIDVK 592
>gi|2599012|gb|AAC61636.1|   T-cell receptor alpha chain VJ region [Aotus nancymaae]
 gi|2599014|gb|AAC61637.1|   T-cell receptor alpha chain VJ region [Aotus nancymaae]
          Length = 98

 Score = 35.0 bits (80), Expect = 0.94
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 118 IDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFF 177
           + Y       K  + ++ VQ DK    L + + +T         CAE  +    T KL F
Sbjct: 30  LAYILSNTDTKQDQ-RLTVQLDKKNKHLSLSIAETQTGDSAIYFCAESFDYSSNTGKLTF 88

Query: 178 -DGDLL 182
            DG  L
Sbjct: 89  GDGTTL 94
>gi|45190854|ref|NP_985108.1|   AER251Wp [Eremothecium gossypii]
 gi|44983896|gb|AAS52932.1|   AER251Wp [Eremothecium gossypii]
          Length = 407

 Score = 34.6 bits (79), Expect = 1.3
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 139 DKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR-TIKLFFDGDLLDPNDTPNNQDMEGNE 197
           D  K  + +  + T     +           P   + L FD + +D +DT  N D+E  +
Sbjct: 343 DNKKVFIHV--RPTTTLLKVAEHYRVAKELPPTVQLSLMFDHEEIDLDDTICNIDIEDGD 400

Query: 198 VIDLKIK 204
           +I++ +K
Sbjct: 401 IIEVVVK 407
>gi|2492661|sp|Q12397|STCA_EMENI   Putative sterigmatocystin biosynthesis polyketide synthase (PKS)
 gi|972728|gb|AAA81586.1|   polyketide synthase
 gi|1235619|gb|AAC49191.1|   putative polyketide synthase
          Length = 2181

 Score = 34.6 bits (79), Expect = 1.4
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 87  EDTPHSIGLKSFHTLTGH--PTKSHNNNNVAAKIDYN-PEALCRKPKKFQVKVQADKWKH 143
            DTP  + + +F    G+              +I  +  EA   +  +      A +W H
Sbjct: 788 TDTPRRVLINNFSAAGGNTAVLVEDAPVPELGEIAGSFGEAAGNQSSELSYTTTARRWHH 847

Query: 144 PLVIPMKKTDNFKII 158
           P  + +   +  +I+
Sbjct: 848 PHRVSITGANTMEIL 862
>gi|32406286|ref|XP_323756.1|   predicted protein [Neurospora crassa]
 gi|28918572|gb|EAA28244.1|   predicted protein [Neurospora crassa]
 gi|40882218|emb|CAF06043.1|   putative protein [Neurospora crassa]
          Length = 466

 Score = 34.2 bits (78), Expect = 1.6
 Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 1/80 (1%)

Query: 122 PEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDP-RTIKLFFDGD 180
            + +        V+V+       +++ + K D+ +++  K AE       + I++ + G 
Sbjct: 356 GKTVVNVRDLINVRVRLSDGSRDVIVQVDKGDSVRVLGRKVAENAKLSSNKKIRIAYMGK 415

Query: 181 LLDPNDTPNNQDMEGNEVID 200
           +L    T  +Q  +   +++
Sbjct: 416 VLKETSTLPDQGWKQGTIVN 435
>gi|6320570|ref|NP_010650.1|   Protein involved in mating-type locus silencing, interacts with
           Sir2p; probably functions to recruit or stabilize Sir
           proteins; Esc2p [Saccharomyces cerevisiae]
 gi|2131447|pir||S61158   hypothetical protein YDR363w - yeast (Saccharomyces cerevisiae)
 gi|849171|gb|AAB64797.1|   Ydr363wp [Saccharomyces cerevisiae]
          Length = 456

 Score = 34.2 bits (78), Expect = 1.8
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 138 ADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRT-IKLFFDGDLLDPNDTPNNQDMEGN 196
             +    + + ++++  F  I      +     +T +KL FD D LD N+   +QDME  
Sbjct: 389 MGQDNKKIYVHVRRSTPFSKIAEYYRIQKQLPQKTRVKLLFDHDELDMNECIADQDMEDE 448

Query: 197 EVIDLKI 203
           +++D+ I
Sbjct: 449 DMVDVII 455
>gi|49096946|ref|XP_409933.1|   hypothetical protein AN5796.2 [Aspergillus nidulans FGSC A4]
 gi|40743699|gb|EAA62889.1|   hypothetical protein AN5796.2 [Aspergillus nidulans FGSC A4]
          Length = 404

 Score = 33.8 bits (77), Expect = 2.2
 Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 18/139 (12%)

Query: 72  ENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPE-----ALC 126
            ++   D     V  E     I                + N V    +            
Sbjct: 275 FDEFFSDADACRVYMEAVTEEIYAARHRF---------SPNVVGVDPESTGSPHSEGTEQ 325

Query: 127 RKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR-TIKLFFDGDLLDPN 185
               +  +K           I +  T     +     E  +  P   + L FDGD LDP 
Sbjct: 326 HAKNEIILKCPG---HDDFKIQIPLTTTISQVIGAFREARSISPGLVVYLAFDGDRLDPQ 382

Query: 186 DTPNNQDMEGNEVIDLKIK 204
            +  + ++   +++D+ I+
Sbjct: 383 SSLEDNEITDGDLVDVLIR 401
>gi|34393563|dbj|BAC83161.1|   hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 130

 Score = 33.4 bits (76), Expect = 2.6
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPR--TIKLFFDGDLLDPNDTPN 189
             +KVQ    +      M +T+  + +     +  +   +  T +  FDG  L    TP 
Sbjct: 39  VTLKVQGTDGRAVYR-TMLRTEELQGLMDFYYDRSHGRVQRGTGRFLFDGRRLRGWQTPA 97

Query: 190 NQDMEGNE 197
              ME  +
Sbjct: 98  ELQMEDGD 105
>gi|2599038|gb|AAC61649.1|   T-cell receptor alpha chain VJ region [Aotus nancymaae]
          Length = 97

 Score = 33.4 bits (76), Expect = 3.0
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 118 IDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFF 177
           + Y       K  + ++ VQ DK    L + + +T         CAE  +        F 
Sbjct: 30  LAYILSNTDTKQDQ-RLTVQLDKKNKHLSLSIAETQTGDSAIYFCAERDSGSGSYQLTFG 88

Query: 178 DGDLLD 183
            G  L 
Sbjct: 89  KGTKLS 94
>gi|20129061|ref|NP_608344.1|  LocusLink info CG14224-PA [Drosophila melanogaster]
 gi|7293631|gb|AAF49003.1|  LocusLink info CG14224-PA [Drosophila melanogaster]
 gi|21711699|gb|AAM75040.1|  LocusLink info LD38919p [Drosophila melanogaster]
          Length = 547

 Score = 33.4 bits (76), Expect = 3.1
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 129 PKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTP 188
            K+  V V+  K K  + +   +    K   I  A++   +P  + L F G ++   DT 
Sbjct: 6   SKRINVVVKTPKDKKTVEV--DEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTL 63

Query: 189 NNQDMEGNEVIDLKIKA 205
              +++ N  + L IKA
Sbjct: 64  QMHNIKDNLTVHLVIKA 80
>gi|17569595|ref|NP_509948.1|  LocusLink info predicted CDS, putative cytoplasmic protein (XM279) [Caenorhabditis
           elegans]
 gi|7507102|pir||T24466   hypothetical protein T04F8.3 - Caenorhabditis elegans
 gi|3924837|emb|CAA91479.1|   Hypothetical protein T04F8.3 [Caenorhabditis elegans]
          Length = 177

 Score = 33.4 bits (76), Expect = 3.1
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 56  KFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPT 106
               L  + A++  I  ++I +      V  +DT   IG++    +  H T
Sbjct: 65  PLCELRDKYAAKYNIFPHEIDMFYDDKEVFDDDTCSEIGIEHEQIIRMHVT 115
>gi|46435451|gb|EAK94832.1|   hypothetical protein CaO19.2326 [Candida albicans SC5314]
 gi|46435511|gb|EAK94891.1|   hypothetical protein CaO19.9862 [Candida albicans SC5314]
          Length = 485

 Score = 33.1 bits (75), Expect = 4.3
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 8/95 (8%)

Query: 114 VAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNC----- 168
             +K   + E +   P  F + ++    K  + + +      + +               
Sbjct: 394 PTSKAPSSEEPVG--PNLFVIGLKGKDNKR-VEVKVSPETQLRKLLSYYLRHKGLSEDTV 450

Query: 169 DPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDLKI 203
           D    KL FD + +D NDT  + ++E +  I + I
Sbjct: 451 DLSKAKLIFDDEEMDLNDTVGDTELEEDYEIQVVI 485
>gi|25395673|pir||A88397   protein H04J21.1 [imported] - Caenorhabditis elegans
          Length = 325

 Score = 33.1 bits (75), Expect = 4.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 55  QKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGL 95
           +K   L K ++ + G+D   I V      + P DTP+S+GL
Sbjct: 236 EKLGRLDKRISEKIGVDAKFIRVTYNGRPIDPMDTPYSLGL 276

 Score = 31.9 bits (72), Expect = 7.9
 Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 8/63 (12%)

Query: 131 KFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNN 190
           KFQ++V        L   +++ +    +  + +E++  D + I++ ++G  +DP DTP +
Sbjct: 222 KFQLEV--------LHSHVEENEKLGRLDKRISEKIGVDAKFIRVTYNGRPIDPMDTPYS 273

Query: 191 QDM 193
             +
Sbjct: 274 LGL 276
>gi|34907010|ref|NP_914852.1|   putative ubiquitin-like protein [Oryza sativa (japonica
           cultivar-group)]
 gi|19386772|dbj|BAB86153.1|   putative ubiquitin-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 121

 Score = 32.7 bits (74), Expect = 4.4
 Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 22/90 (24%)

Query: 132 FQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNN- 190
             +KV+       +   +K++   K +     +  + D   I   FDG  L    TP+  
Sbjct: 21  INLKVKGQDGNE-VFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDEY 79

Query: 191 --------------------QDMEGNEVID 200
                                +ME  + ID
Sbjct: 80  LRSLANHHQSITDDHCKLVQLEMEDGDEID 109
>gi|49067614|ref|XP_398097.1|   hypothetical protein UM00482.1 [Ustilago maydis 521]
 gi|46096160|gb|EAK81393.1|   hypothetical protein UM00482.1 [Ustilago maydis 521]
          Length = 538

 Score = 32.7 bits (74), Expect = 5.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 170 PRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 201
           P  IK+ FDG    PN T  + D+E  + I+L
Sbjct: 504 PHAIKISFDGFAYTPNQTVQDMDVEDGDQIEL 535
>gi|45581705|tpg|DAA02252.1|  LocusLink info TPA: RAS-like family 11 member B [Rattus norvegicus]
          Length = 247

 Score = 32.3 bits (73), Expect = 5.9
 Identities = 15/75 (20%), Positives = 25/75 (33%)

Query: 63  ELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNP 122
           +LAS  G    +++V   YN V          +      +G P K   +     K     
Sbjct: 168 QLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSPKQQASGTPEKRRTSLIPRPKSPNMQ 227

Query: 123 EALCRKPKKFQVKVQ 137
           +   R  +    KV+
Sbjct: 228 DLKRRFKQALSAKVR 242
>gi|34877259|ref|XP_223353.2|  LocusLink info similar to 1190017B18Rik protein [Rattus norvegicus]
          Length = 407

 Score = 32.3 bits (73), Expect = 5.9
 Identities = 15/75 (20%), Positives = 25/75 (33%)

Query: 63  ELASRNGIDENDITVDMYYNFVGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNP 122
           +LAS  G    +++V   YN V          +      +G P K   +     K     
Sbjct: 328 QLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSPKQQASGTPEKRRTSLIPRPKSPNMQ 387

Query: 123 EALCRKPKKFQVKVQ 137
           +   R  +    KV+
Sbjct: 388 DLKRRFKQALSAKVR 402
>gi|23128759|ref|ZP_00110598.1|   COG3206: Uncharacterized protein involved in exopolysaccharide
           biosynthesis [Nostoc punctiforme]
          Length = 748

 Score = 32.3 bits (73), Expect = 6.2
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 15/92 (16%)

Query: 106 TKSHNNNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIP-MKKTDNFKI------I 158
             + N  N   ++  +P  L R   K Q+K   D+   PL +  ++K+   KI      +
Sbjct: 89  LATQNPINTQIEVISSPTLLQRTIDKLQLK---DQEGKPLEVEKLRKSLTLKIVSATDVL 145

Query: 159 FIKC-----AEELNCDPRTIKLFFDGDLLDPN 185
            I        +        + L+ D D+L   
Sbjct: 146 RISYTSPDPEQSAAVVNTIMSLYLDNDILTNR 177
>gi|17553844|ref|NP_497543.1|  LocusLink info putative protein family member, with a transmembrane domain, 2
           coiled coil-4 domains (3D456) [Caenorhabditis elegans]
 gi|4966250|gb|AAD34647.1|   Hypothetical protein H04J21.1 [Caenorhabditis elegans]
          Length = 1032

 Score = 32.3 bits (73), Expect = 7.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 55  QKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIGL 95
           +K   L K ++ + G+D   I V      + P DTP+S+GL
Sbjct: 943 EKLGRLDKRISEKIGVDAKFIRVTYNGRPIDPMDTPYSLGL 983
>gi|15239691|ref|NP_199682.1|   ubiquitin-related [Arabidopsis thaliana]
 gi|9758870|dbj|BAB09424.1|   unnamed protein product [Arabidopsis thaliana]
          Length = 114

 Score = 31.9 bits (72), Expect = 7.7
 Identities = 12/72 (16%), Positives = 27/72 (37%)

Query: 129 PKKFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTP 188
           P    +KV+    +   V  +++      +     +    +  T +  FDG  +    TP
Sbjct: 25  PTHVTLKVKGQDEEDFRVFWVRRNAKLLKMMELYTKMRGIEWNTFRFLFDGSRIREYHTP 84

Query: 189 NNQDMEGNEVID 200
           +  + +  + ID
Sbjct: 85  DELERKDGDEID 96
  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Jun 28, 2004 12:15 AM
  Number of letters in database: 622,745,705
  Number of sequences in database:  1,875,456
  
Lambda     K      H
   0.316    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0479    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,069,953
Number of Sequences: 1875456
Number of extensions: 2491689
Number of successful extensions: 4356
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4315
Number of HSP's gapped (non-prelim): 34
length of query: 205
length of database: 622,745,705
effective HSP length: 119
effective length of query: 86
effective length of database: 399,566,441
effective search space: 34362713926
effective search space used: 34362713926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (31.7 bits)