RID=1089739899-4460-139119803481.BLASTQ4, Zm

RID=1089739899-4460-139119803481.BLASTQ4, Zm_TC223370 BLASTP 2.2.9 [May-01-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1089739899-4460-139119803481.BLASTQ4
Query= Zm_TC223370 (229 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 1,922,832 sequences; 641,309,329 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Distribution of 73 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34912494|ref|NP_917594.1|  putative amino acid or GABA pe...   181   1e-44
gi|18408968|ref|NP_564924.1|  ubiquitin-related [Arabidopsis...   116   4e-25
gi|46435317|gb|EAK94701.1|  hypothetical protein CaO19.670 [...    43   0.005
gi|37546495|ref|XP_168354.2|  similar to SMT3 suppressor of ...    42   0.011
gi|49655579|emb|CAG88153.1|  unnamed protein product [Debary...    41   0.023
gi|49086586|ref|XP_405328.1|  hypothetical protein AN1191.2 ...    40   0.044
gi|38109015|gb|EAA54946.1|  hypothetical protein MG05737.4 [...    40   0.048
gi|45751566|gb|AAH68007.1|  FLJ14639 protein [Homo sapiens]        39   0.071
gi|49641401|emb|CAH01119.1|  unnamed protein product [Kluyve...    39   0.082
gi|46108880|ref|XP_381498.1|  hypothetical protein FG01322.1...    39   0.083
gi|19112827|ref|NP_596035.1|  ubiquitin-like modifier [Schiz...    39   0.083
gi|39589515|emb|CAE74544.1|  Hypothetical protein CBG22301 [...    39   0.092
gi|32420039|ref|XP_330463.1|  hypothetical protein [Neurospo...    39   0.10 
gi|14042298|dbj|BAB55189.1|  unnamed protein product [Homo s...    39   0.10 
gi|17508217|ref|NP_490842.1|  SUMO, small ubiquitin-like mod...    39   0.10 
gi|33304726|gb|AAP34642.1|  small ubiquitin-like modifier [B...    39   0.11 
gi|6691508|dbj|BAA89293.1|  small ubiquitin-related protein ...    38   0.13 
gi|45199216|ref|NP_986245.1|  AFR697Cp [Eremothecium gossypi...    38   0.17 
gi|11279016|pir||T43537  ubiquitin-like protein smt3 - fissi...    38   0.20 
gi|2707597|gb|AAB92355.1|  nonstructural protein P125-2 [pes...    38   0.21 
gi|49527787|emb|CAG61436.1|  unnamed protein product [Candid...    38   0.22 
gi|6320718|ref|NP_010798.1|  Protein that may be involved in...    37   0.23 
gi|38086507|ref|XP_355884.1|  similar to SMT3 suppressor of ...    37   0.24 
gi|48102954|ref|XP_392826.1|  similar to SUMO, small ubiquit...    37   0.25 
gi|39580526|emb|CAE66529.1|  Hypothetical protein CBG11828 [...    37   0.28 
gi|47218566|emb|CAG10265.1|  unnamed protein product [Tetrao...    37   0.39 
gi|21360814|gb|AAM49721.1|  hypothetical protein [Homo sapiens]    37   0.42 
gi|8569260|pdb|1EUV|B  Chain B, X-Ray Structure Of The C-Ter...    37   0.45 
gi|34866007|ref|XP_346731.1|  hypothetical protein XP_346730...    37   0.46 
gi|47211840|emb|CAF90473.1|  unnamed protein product [Tetrao...    37   0.47 
gi|46447823|ref|NP_116204.3|  nuclear factor of activated T-...    37   0.47 
gi|9910556|ref|NP_064313.1|  SMT3 (supressor of mif two, 3) ...    36   0.57 
gi|30584365|gb|AAP36431.1|  Homo sapiens SMT3 suppressor of ...    36   0.62 
gi|11041477|dbj|BAB17279.1|  hypothetical protein [Macaca fa...    36   0.69 
gi|48928058|ref|NP_008867.2|  small ubiquitin-like modifier ...    36   0.70 
gi|32450081|gb|AAH54172.1|  MGC64297 protein [Xenopus laevis...    36   0.70 
gi|33604214|gb|AAH56283.1|  Zgc:65934 protein [Danio rerio] ...    36   0.72 
gi|47226342|emb|CAG09310.1|  unnamed protein product [Tetrao...    36   0.76 
gi|47229942|emb|CAG10356.1|  unnamed protein product [Tetrao...    35   0.87 
gi|1770517|emb|CAA67896.1|  SMT3A protein [Homo sapiens]           35   0.87 
gi|21361388|ref|NP_008868.2|  SMT3 suppressor of mif two 3 h...    35   0.93 
gi|49899212|gb|AAH75786.1|  Unknown (protein for MGC:86902) ...    35   0.97 
gi|19111164|ref|NP_579932.1|  SMT3 (supressor of mif two, 3)...    35   1.2  
gi|34876663|ref|XP_217413.2|  similar to Chain  , Structure ...    35   1.2  
gi|49256565|gb|AAH72995.1|  Unknown (protein for MGC:82571) ...    35   1.2  
gi|34849696|gb|AAH58303.1|  Zgc:65847 protein [Danio rerio] ...    35   1.3  
gi|31200225|ref|XP_309060.1|  ENSANGP00000019625 [Anopheles ...    35   1.5  
gi|46915170|emb|CAG21943.1|  putative penicillin-binding pro...    35   1.5  
gi|45383836|ref|NP_989466.1|  ubiquitin-like 1 (sentrin) [Ga...    35   1.5  
gi|46228698|gb|EAK89568.1|  similar to ubiquitin-like protei...    35   1.6  
gi|49900045|gb|AAH77048.1|  Unknown (protein for MGC:89967) ...    35   1.6  
gi|42490984|gb|AAH66306.1|  SUMO1 protein [Homo sapiens]           35   1.7  
gi|28277282|gb|AAH45271.1|  Smt3h2-prov protein [Xenopus lae...    35   1.8  
gi|41351308|gb|AAH65723.1|  Unknown (protein for MGC:71987) ...    35   1.8  
gi|3892023|pdb|1A5R|   Structure Determination Of The Small ...    34   1.9  
gi|41151251|ref|XP_372870.1|  similar to Ubiquitin-like prot...    34   2.0  
gi|2791892|emb|CAB09807.1|  SUMO-1 protein [Xenopus laevis]        34   2.0  
gi|4507801|ref|NP_003343.1|  SMT3 suppressor of mif two 3 ho...    34   2.2  
gi|9664277|gb|AAF97049.1|  sentrin [Cervus nippon]                 34   2.3  
gi|29247808|gb|EAA39359.1|  GLP_336_5901_6209 [Giardia lambl...    34   2.7  
gi|34907008|ref|NP_914851.1|  putative ubiquitin-like protei...    33   3.2  
gi|1707372|emb|CAA67923.1|  ubiquitin-like protein [Arabidop...    33   3.6  
gi|17137634|ref|NP_477411.1|  CG4494-PA [Drosophila melanoga...    33   3.8  
gi|13386248|ref|NP_081946.1|  RIKEN cDNA 4933411G06 [Mus mus...    33   4.6  
gi|34393565|dbj|BAC83163.1|  unknown protein [Oryza sativa (...    33   4.9  
gi|23613081|ref|NP_703403.1|  ubiquitin-like protein, putati...    33   5.9  
gi|23130063|ref|ZP_00111882.1|  COG1208: Nucleoside-diphosph...    33   6.5  
gi|16119340|ref|NP_396046.1|  AGR_pAT_164p [Agrobacterium tu...    33   6.5  
gi|17938697|ref|NP_535485.1|  conjugal transfer protein [Agr...    33   6.5  
gi|15240472|ref|NP_200328.1|  small ubiquitin-like modifier ...    33   6.7  
gi|7488638|pir||T09529  ubiquitin-like protein - chickpea >g...    32   7.6  
gi|47214992|emb|CAG03132.1|  unnamed protein product [Tetrao...    32   8.7  
gi|49647993|emb|CAG82446.1|  unnamed protein product [Yarrow...    32   8.8  

Alignments


>gi|34912494|ref|NP_917594.1| putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
 gi|18677110|dbj|BAB84837.1| putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
 gi|20804797|dbj|BAB92481.1| putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
          Length = 766

 Score =  181 bits (458), Expect = 1e-44
 Identities = 105/230 (45%), Positives = 139/230 (60%), Gaps = 22/230 (9%)

Query: 18  PLFDYKRVQPRMTFCFDDSDLEVADIFKYCNKRPKVH------TSTEEGKPDEEVAAAKV 71
           PLFDY RVQP M F FDD+D+E +DIF +CNKR KV        + E+G   E+ AA   
Sbjct: 537 PLFDYSRVQPTMAFSFDDTDIEKSDIFVHCNKRRKVADGDGDANADEKGDKGEQKAAKAA 596

Query: 72  VVLD--EEDWLQPPPPKAAFRAT---AEEDSAFRELR---------LKKQEWAKFAESAE 117
            V+D  EEDWL PPPP          +E+ S  +ELR         L+KQ  AKFAESA+
Sbjct: 597 AVVDLGEEDWLPPPPPPKPKSTVTDESEQSSVLKELRYKPVHGSILLQKQAMAKFAESAD 656

Query: 118 DILQKLDEITNKEVGPKEPPEQIILDEESEPQVEKAREKIVISIQDKDGQQQMRVYKDEK 177
           D L+KL +   ++V  + P E I LD+   P+  +AREK+V+++QDK G  Q R+YKDEK
Sbjct: 657 DFLEKLAQTARQKVEARIPTEHIDLDKS--PERHEAREKVVVTVQDKAGHHQFRLYKDEK 714

Query: 178 FDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRK 227
           F             + +DL+F FDG+K++  STP+DL LEDEDM+EV  K
Sbjct: 715 FGKLFRAYAKKVNLSVADLTFAFDGDKVDAESTPEDLGLEDEDMVEVLHK 764



>gi|18408968|ref|NP_564924.1| ubiquitin-related [Arabidopsis thaliana]
 gi|21554742|gb|AAM63677.1| unknown [Arabidopsis thaliana]
          Length = 215

 Score =  116 bits (290), Expect = 4e-25
 Identities = 89/220 (40%), Positives = 129/220 (58%), Gaps = 12/220 (5%)

Query: 13  GEDLEPLFDYKRVQPRMTFCFDDSDLEVADIFKYCNKRPKVHTSTEEGKPDEEVAAAKVV 72
           GEDLEPLFDY+RVQP    C DD D + +       K+ K   + E+   D +V    + 
Sbjct: 5   GEDLEPLFDYRRVQPANFVCIDDDDDDAS--VTPIPKKAKTSQTVEKLDDDVKV----IE 58

Query: 73  VLDEEDWLQPPPPKAAFRATAE--EDSAFRELRLKKQEWAKFAESAEDILQKLDEITNKE 130
           V  ++DWL PPP K  F  + +  EDS  + LR KK E   F ++  D++Q+++E   +E
Sbjct: 59  VTGDDDWLLPPP-KVIFDKSKDSVEDSTIKALRSKKMELMSFTKTVGDVMQEVEESAKRE 117

Query: 131 VG-PKEPPEQIILDEESEPQVEKAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXX 189
           V   + P  +      SEP  ++A  KIVI+IQDKDGQ+ +RV+ DEKF+          
Sbjct: 118 VEESRNPSSETAAQLPSEPTNDRA--KIVITIQDKDGQKTLRVFADEKFERVIKLYTDKA 175

Query: 190 XXNPSDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
             +P +L F+FDG+KI+PS+TP +L +ED DMIEV  K++
Sbjct: 176 KLDPQNLVFIFDGDKIDPSTTPSELGMEDHDMIEVHTKKT 215



>gi|46435317|gb|EAK94701.1| hypothetical protein CaO19.670 [Candida albicans SC5314]
 gi|46435359|gb|EAK94742.1| hypothetical protein CaO19.8287 [Candida albicans SC5314]
          Length = 102

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 145 ESEPQVEKAREKIVISIQDKDGQQQM--RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDG 202
           E+ P+ EK      I+++  DG Q++  +V ++ KF             +P  + F+ DG
Sbjct: 15  EAGPKEEKGTH---INVKVSDGTQEVFFKVKRNTKFRRLMEAFAKRQGTSPDTMRFLVDG 71

Query: 203 EKINPSSTPQDLDLEDEDMIEVRRKQ 228
            +++   TP+DLD++D D IE  R Q
Sbjct: 72  GRVHADQTPEDLDMDDGDTIEAHRAQ 97



>gi|37546495|ref|XP_168354.2| similar to SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
          Length = 160

 Score = 42.0 bits (97), Expect = 0.011
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)

Query: 130 EVGPKEPPEQIILDEESEPQVE-KAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXX 187
           E   +E P   + DE+ +  V+ +  + I + +  +DG   Q ++ +             
Sbjct: 55  ETAAEEIPALAMADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCE 114

Query: 188 XXXXNPSDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
               +   + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 115 RQGLSVRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 156



>gi|49655579|emb|CAG88153.1| unnamed protein product [Debaryomyces hansenii]
          Length = 93

 Score = 40.8 bits (94), Expect = 0.023
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 143 DEESEPQVEKA-REKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           D E++P+ EK     I + + D   +   ++ +                     L F+ D
Sbjct: 3   DNENQPKEEKPDNTHINLKVSDGSAEIFFKIKRSTPMRRLMEAFCKRQGKTMDTLRFLID 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           G ++ P +TP DLDLED D+IE  R+Q
Sbjct: 63  GARVGPDNTPDDLDLEDGDVIEAHREQ 89



>gi|49086586|ref|XP_405328.1| hypothetical protein AN1191.2 [Aspergillus nidulans FGSC A4]
 gi|40746628|gb|EAA65784.1| hypothetical protein AN1191.2 [Aspergillus nidulans FGSC A4]
          Length = 94

 Score = 40.0 bits (92), Expect = 0.044
 Identities = 20/81 (24%), Positives = 36/81 (44%)

Query: 148 PQVEKAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINP 207
           P+     E + I + D + +   ++ +                  PS + F+FDG ++ P
Sbjct: 9   PEAPAPVEHLNIKVTDNNNEVFFKIKRTTTLKKLMDAFCDRQGKQPSTVRFLFDGTRVRP 68

Query: 208 SSTPQDLDLEDEDMIEVRRKQ 228
             TP  LD+ D D +EV ++Q
Sbjct: 69  EDTPDTLDMADGDTLEVHQEQ 89



>gi|38109015|gb|EAA54946.1| hypothetical protein MG05737.4 [Magnaporthe grisea 70-15]
          Length = 109

 Score = 39.7 bits (91), Expect = 0.048
 Identities = 18/74 (24%), Positives = 38/74 (51%)

Query: 155 EKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQDL 214
           E + I + D + +   ++ +  K +            + S + F+FDG+++ P+ TP  L
Sbjct: 32  EHLNIKVTDNNNEVFFKIKRSTKLEKLMNAFCDRQGKSLSQVRFLFDGQRVQPTDTPDTL 91

Query: 215 DLEDEDMIEVRRKQ 228
           ++ D D +EV ++Q
Sbjct: 92  EMADGDTLEVHQEQ 105



>gi|45751566|gb|AAH68007.1| FLJ14639 protein [Homo sapiens]
          Length = 127

 Score = 39.3 bits (90), Expect = 0.071
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 146 SEPQVEKAREKIVISIQDKDGQQQMRVY--KDEKFDXXXXXXXXXXXXNPSDLSFVFDGE 203
           S P+  +  +++ + +Q K+  Q + V   +D                +   LSF FDG 
Sbjct: 45  SSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGT 104

Query: 204 KINPSSTPQDLDLEDEDMIEV 224
           K++    P DL +E  D+IEV
Sbjct: 105 KLSGRELPADLGMESGDLIEV 125



>gi|49641401|emb|CAH01119.1| unnamed protein product [Kluyveromyces lactis]
          Length = 93

 Score = 38.9 bits (89), Expect = 0.082
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 142 LDEESEPQVE-KAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVF 200
           + EE E +V+ K    I + + D   +   ++ K                     L F++
Sbjct: 1   MSEEQEQKVDVKPETHINLKVSDGSSEIFFKIKKTTPLKRLMEAFAKRQGKEIESLRFLY 60

Query: 201 DGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           DG ++ P  TP+DLD+ED D+IE  R+Q
Sbjct: 61  DGVRVLPDQTPEDLDMEDNDIIEAHREQ 88



>gi|46108880|ref|XP_381498.1| hypothetical protein FG01322.1 [Gibberella zeae PH-1]
 gi|42547788|gb|EAA70631.1| hypothetical protein FG01322.1 [Gibberella zeae PH-1]
          Length = 98

 Score = 38.9 bits (89), Expect = 0.083
 Identities = 19/80 (23%), Positives = 38/80 (47%)

Query: 149 QVEKAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPS 208
           Q     E + I + D + +   ++ +  K +              S + F+FDG ++ P+
Sbjct: 13  QAPANSEHLNIKVTDNNNEVFFKIKRTTKLEKLMGAFCERQGKATSSVRFLFDGTRVQPT 72

Query: 209 STPQDLDLEDEDMIEVRRKQ 228
            TP  L+++D D +EV ++Q
Sbjct: 73  DTPDALEMQDGDTLEVHQEQ 92



>gi|19112827|ref|NP_596035.1| ubiquitin-like modifier [Schizosaccharomyces pombe]
 gi|12644047|sp|O13351|SMT3_SCHPO Ubiquitin-like protein smt3/pmt3
 gi|7493576|pir||T40313 ubiquitin-like modifier protein - fission yeast
           (Schizosaccharomyces pombe)
 gi|3510372|dbj|BAA32595.1| Pmt3p [Schizosaccharomyces pombe]
 gi|5051479|emb|CAB44758.1| pmt3 [Schizosaccharomyces pombe]
          Length = 117

 Score = 38.9 bits (89), Expect = 0.083
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 144 EESEPQVEKAREKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDG 202
           + S+  V+ + E I + +  +D  +   ++ K  +F             + + L F+ DG
Sbjct: 23  DTSQQDVKPSTEHINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDG 82

Query: 203 EKINPSSTPQDLDLEDEDMIEVRRKQ 228
           E+I P  TP +LD+ED D IE   +Q
Sbjct: 83  ERIRPDQTPAELDMEDGDQIEAVLEQ 108



>gi|39589515|emb|CAE74544.1| Hypothetical protein CBG22301 [Caenorhabditis briggsae]
 gi|39598393|emb|CAE69086.1| Hypothetical protein CBG15104 [Caenorhabditis briggsae]
          Length = 95

 Score = 38.9 bits (89), Expect = 0.092
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           + L F+FDG +IN   TP+ L++ED+D+IEV ++Q
Sbjct: 57  NSLRFLFDGRRINDEDTPKSLEMEDDDVIEVYQEQ 91



>gi|32420039|ref|XP_330463.1| hypothetical protein [Neurospora crassa]
 gi|28925836|gb|EAA34837.1| hypothetical protein [Neurospora crassa]
          Length = 99

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 17/76 (22%), Positives = 39/76 (51%)

Query: 153 AREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQ 212
           A E + I + D + +   ++ +  K +              + + F+F+G+++ P+ TP 
Sbjct: 20  AVEHLNIKVTDNNNEVFFKIKRSTKLEKLMTAFCERQGKTLASVRFLFEGQRVQPTDTPD 79

Query: 213 DLDLEDEDMIEVRRKQ 228
            L+++D D +EV ++Q
Sbjct: 80  TLEMQDGDCLEVHQEQ 95



>gi|14042298|dbj|BAB55189.1| unnamed protein product [Homo sapiens]
 gi|17390726|gb|AAH18311.1| FLJ14639 protein [Homo sapiens]
 gi|18204286|gb|AAH21551.1| FLJ14639 protein [Homo sapiens]
          Length = 138

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 146 SEPQVEKAREKIVISIQDKDGQQQMRVY--KDEKFDXXXXXXXXXXXXNPSDLSFVFDGE 203
           S P+  +  +++ + +Q K+  Q + V   +D                +   LSF FDG 
Sbjct: 56  SSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGT 115

Query: 204 KINPSSTPQDLDLEDEDMIEV 224
           K++    P DL +E  D+IEV
Sbjct: 116 KLSGRELPADLGMESGDLIEV 136



>gi|17508217|ref|NP_490842.1| SUMO, small ubiquitin-like modifier, SUMO, small ubiquitin-like
           modifier SMO-1 (10.2 kD) (smo-1) [Caenorhabditis
           elegans]
 gi|2501447|sp|P55853|SMT3_CAEEL Ubiquitin-like protein SMT3
 gi|7446815|pir||JC5582 SMT3 protein - Caenorhabditis elegans
 gi|1707420|emb|CAA67914.1| ubiquitin-like protein [Caenorhabditis elegans]
 gi|2341095|gb|AAB67608.1| ubiquitin-like protein [Caenorhabditis elegans]
 gi|13324997|gb|AAK18969.1| Sumo (ubiquitin-related) homolog protein 1 [Caenorhabditis elegans]
          Length = 91

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           + L F+FDG +IN   TP+ L++ED+D+IEV ++Q
Sbjct: 53  NSLRFLFDGRRINDDDTPKTLEMEDDDVIEVYQEQ 87



>gi|33304726|gb|AAP34642.1| small ubiquitin-like modifier [Bigelowiella natans]
          Length = 90

 Score = 38.5 bits (88), Expect = 0.11
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 147 EPQVEKAREKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKI 205
           E + +K  E + + ++ +DG +   +V K   F               S + F+FDG++I
Sbjct: 3   ETKDQKPNEHLNLKVKSQDGNEVFFKVKKTTPFKRLMEAYCQKVGAEKSSVRFLFDGDRI 62

Query: 206 NPSSTPQDLDLEDEDMIEVRRKQS 229
           +   TP DLD++DED I+   +Q+
Sbjct: 63  SGDQTPADLDMQDEDEIDAMVQQT 86



>gi|6691508|dbj|BAA89293.1| small ubiquitin-related protein 1 [Oncorhynchus mykiss]
          Length = 101

 Score = 38.1 bits (87), Expect = 0.13
 Identities = 17/36 (47%), Positives = 30/36 (83%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           S L F+F+G++I+ + TP++L +EDED+IEV ++Q+
Sbjct: 60  STLRFLFEGQRISDNHTPKELGMEDEDVIEVYQEQT 95



>gi|45199216|ref|NP_986245.1| AFR697Cp [Eremothecium gossypii]
 gi|44985356|gb|AAS54069.1| AFR697Cp [Eremothecium gossypii]
          Length = 92

 Score = 37.7 bits (86), Expect = 0.17
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDG 202
           ++E +P++ K    I + + D   +   ++ +                     L F++DG
Sbjct: 4   EQEQKPEI-KPETHINLKVSDGSSEIFFKIKRTTPLRRLMEAFAKRQGKEMDSLRFLYDG 62

Query: 203 EKINPSSTPQDLDLEDEDMIEVRRKQ 228
            +I P  TP DLD+ED D+IE  R+Q
Sbjct: 63  VRIQPDQTPDDLDMEDNDIIEAHREQ 88



>gi|11279016|pir||T43537 ubiquitin-like protein smt3 - fission yeast  (Schizosaccharomyces
           pombe)
 gi|2444268|gb|AAB71541.1| ubiquitin-like protein; SpSmt3p [Schizosaccharomyces pombe]
          Length = 90

 Score = 37.7 bits (86), Expect = 0.20
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 171 RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           ++ K  +F             + + L F+ DGE+I P  TP +LD+ED D IE   +Q
Sbjct: 24  KIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQ 81



>gi|2707597|gb|AAB92355.1| nonstructural protein P125-2 [pestivirus type 1]
          Length = 239

 Score = 37.7 bits (86), Expect = 0.21
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 114 IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 147



>gi|49527787|emb|CAG61436.1| unnamed protein product [Candida glabrata]
          Length = 108

 Score = 37.7 bits (86), Expect = 0.22
 Identities = 22/86 (25%), Positives = 37/86 (43%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDG 202
           D + +    K+   I + + D   +   ++ K                     L F++DG
Sbjct: 18  DLQGQGDAPKSETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDG 77

Query: 203 EKINPSSTPQDLDLEDEDMIEVRRKQ 228
            +I    TP+DLD+ED D+IE  R+Q
Sbjct: 78  LRIQADQTPEDLDMEDNDLIEAHREQ 103



>gi|6320718|ref|NP_010798.1| Protein that may be involved in function and/or structure of the
           eukaryotic kinetochore; has similarity to SUMO-1; Smt3p
           [Saccharomyces cerevisiae]
 gi|2501450|sp|Q12306|SMT3_YEAST Ubiquitin-like protein SMT3 precursor
 gi|2133144|pir||S63999 SMT3 protein - yeast (Saccharomyces cerevisiae)
 gi|20151196|pdb|1L2N|A Chain A, Smt3 Solution Structure
 gi|881372|gb|AAB01675.1| Smt3p
 gi|927779|gb|AAB64951.1| suppressor of MIF2 mutations; CAI: 0.31 [Saccharomyces cerevisiae]
 gi|45270238|gb|AAS56500.1| YDR510W [Saccharomyces cerevisiae]
          Length = 101

 Score = 37.4 bits (85), Expect = 0.23
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 142 LDEESEPQVE---KAREKIVISIQDKDGQQQMRVYKDEKFDXXXXXXXXXXXXNPSDLSF 198
           +++E++P+V+   K    I + + D   +   ++ K                     L F
Sbjct: 6   VNQEAKPEVKPEVKPETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRF 65

Query: 199 VFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           ++DG +I    TP+DLD+ED D+IE  R+Q
Sbjct: 66  LYDGIRIQADQTPEDLDMEDNDIIEAHREQ 95



>gi|38086507|ref|XP_355884.1| similar to SMT3 suppressor of mif two 3 homolog 2 [Mus musculus]
          Length = 94

 Score = 37.4 bits (85), Expect = 0.24
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           DE+ +  V+   + I + +  +DG   Q ++ +                 +     F FD
Sbjct: 3   DEKPKKGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCEHQGLSMRQNRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  LD+EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLDIEDEDTIDVFQQQT 90



>gi|48102954|ref|XP_392826.1| similar to SUMO, small ubiquitin-like modifier, SUMO, small
           ubiquitin-like modifier SMO-1 (10.2 kD) (smo-1) [Apis
           mellifera]
          Length = 98

 Score = 37.4 bits (85), Expect = 0.25
 Identities = 16/36 (44%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+FDG++IN   TP+ L++E++D+IEV ++Q+
Sbjct: 59  TSLRFLFDGKRINDDETPKQLEMENDDVIEVYQEQT 94



>gi|39580526|emb|CAE66529.1| Hypothetical protein CBG11828 [Caenorhabditis briggsae]
          Length = 55

 Score = 37.4 bits (85), Expect = 0.28
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           + L F+FDG +IN   TP+ L++ED+D+IEV ++Q
Sbjct: 17  NSLRFLFDGRRINDEDTPKTLEIEDDDVIEVYQEQ 51



>gi|47218566|emb|CAG10265.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 94

 Score = 36.6 bits (83), Expect = 0.39
 Identities = 17/36 (47%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           S L F+F+G++I  + TP++L +EDED+IEV ++Q+
Sbjct: 56  STLRFLFEGQRIADNQTPKELGMEDEDVIEVYQEQT 91



>gi|21360814|gb|AAM49721.1| hypothetical protein [Homo sapiens]
          Length = 419

 Score = 36.6 bits (83), Expect = 0.42
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 146 SEPQVEKAREKIVISIQDKDGQQQMRVY--KDEKFDXXXXXXXXXXXXNPSDLSFVFDGE 203
           S P+  +  +++ + +Q K+  Q + V   +D                +   LSF FDG 
Sbjct: 337 SSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGT 396

Query: 204 KINPSSTPQDLDLEDEDMIEV 224
           K++    P DL +E  D+IEV
Sbjct: 397 KLSGRELPADLGMESGDLIEV 417



>gi|8569260|pdb|1EUV|B Chain B, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In
           Complex With Smt3, The Yeast Ortholog Of Sumo.
          Length = 86

 Score = 36.6 bits (83), Expect = 0.45
 Identities = 17/33 (51%), Positives = 24/33 (72%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           L F++DG +I    TP+DLD+ED D+IE  R+Q
Sbjct: 51  LRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQ 83



>gi|34866007|ref|XP_346731.1| hypothetical protein XP_346730 [Rattus norvegicus]
          Length = 95

 Score = 36.6 bits (83), Expect = 0.46
 Identities = 17/34 (50%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V R+Q+
Sbjct: 58  IRFEFDGQPINETDTPAQLEMEDEDTIDVFRQQT 91



>gi|47211840|emb|CAF90473.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 97

 Score = 36.6 bits (83), Expect = 0.47
 Identities = 17/36 (47%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           S L F+F+G++I  + TP++L +EDED+IEV ++Q+
Sbjct: 60  STLRFLFEGQRIADNQTPKELGMEDEDVIEVYQEQT 95



>gi|46447823|ref|NP_116204.3| nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein [Homo
           sapiens]
 gi|22760416|dbj|BAC11189.1| unnamed protein product [Homo sapiens]
          Length = 419

 Score = 36.6 bits (83), Expect = 0.47
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 146 SEPQVEKAREKIVISIQDKDGQQQMRVY--KDEKFDXXXXXXXXXXXXNPSDLSFVFDGE 203
           S P+  +  +++ + +Q K+  Q + V   +D                +   LSF FDG 
Sbjct: 337 SSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGT 396

Query: 204 KINPSSTPQDLDLEDEDMIEV 224
           K++    P DL +E  D+IEV
Sbjct: 397 KLSGRELPADLGMESGDLIEV 417



>gi|9910556|ref|NP_064313.1| SMT3 (supressor of mif two, 3) homolog 1; SMT3 (supressor of mif
           two, 3) homolog 1 (S. cerevisiae) [Mus musculus]
 gi|23396871|sp|Q9Z172|SM31_MOUSE Ubiquitin-like protein SMT3A
 gi|4091893|gb|AAC99333.1| Smt3A protein [Mus musculus]
 gi|12849688|dbj|BAB28442.1| unnamed protein product [Mus musculus]
 gi|12850124|dbj|BAB28601.1| unnamed protein product [Mus musculus]
          Length = 110

 Score = 36.2 bits (82), Expect = 0.57
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+ +  V+   + I + +  +DG   Q ++ +                 +   + F FD
Sbjct: 3   EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L++EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|30584365|gb|AAP36431.1| Homo sapiens SMT3 suppressor of mif two 3 homolog 1 (yeast)
           [synthetic construct]
          Length = 104

 Score = 36.2 bits (82), Expect = 0.62
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+ +  V+   + I + +  +DG   Q ++ +                 +   + F FD
Sbjct: 3   EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L++EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|11041477|dbj|BAB17279.1| hypothetical protein [Macaca fascicularis]
          Length = 408

 Score = 35.8 bits (81), Expect = 0.69
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 146 SEPQVEKAREKIVISIQDKDGQQQMRVY--KDEKFDXXXXXXXXXXXXNPSDLSFVFDGE 203
           S P+  +   ++ + +Q K+  Q + V   +D                +   LSF FDG 
Sbjct: 326 SSPEATETSRQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGT 385

Query: 204 KINPSSTPQDLDLEDEDMIEV 224
           K++    P DL +E  D+IEV
Sbjct: 386 KLSGRELPADLGMESGDLIEV 406



>gi|48928058|ref|NP_008867.2| small ubiquitin-like modifier protein 3; SMT3 (suppressor of mif
           two 3, yeast) homolog 1 [Homo sapiens]
 gi|23503102|sp|P55854|SM31_HUMAN Ubiquitin-like protein SMT3A
 gi|12652587|gb|AAH00036.1| Small ubiquitin-like modifier protein 3 [Homo sapiens]
 gi|14250044|gb|AAH08420.1| Small ubiquitin-like modifier protein 3 [Homo sapiens]
 gi|30582855|gb|AAP35654.1| SMT3 suppressor of mif two 3 homolog 1 (yeast) [Homo sapiens]
 gi|49457342|emb|CAG46970.1| SMT3H1 [Homo sapiens]
 gi|49457372|emb|CAG46985.1| SMT3H1 [Homo sapiens]
          Length = 103

 Score = 35.8 bits (81), Expect = 0.70
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+ +  V+   + I + +  +DG   Q ++ +                 +   + F FD
Sbjct: 3   EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L++EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|32450081|gb|AAH54172.1| MGC64297 protein [Xenopus laevis]
 gi|49523383|gb|AAH74674.1| Unknown (protein for MGC:69539) [Xenopus tropicalis]
          Length = 94

 Score = 35.8 bits (81), Expect = 0.70
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+ +  V+   + I + +  +DG   Q ++ +                 +   + F FD
Sbjct: 3   EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L++EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|33604214|gb|AAH56283.1| Zgc:65934 protein [Danio rerio]
 gi|45709326|gb|AAH67553.1| Zgc:85634 protein [Danio rerio]
          Length = 100

 Score = 35.8 bits (81), Expect = 0.72
 Identities = 16/36 (44%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  + TP++L +EDED+IEV ++Q+
Sbjct: 59  NSLRFLFEGQRITDNLTPKELGMEDEDVIEVYQEQT 94



>gi|47226342|emb|CAG09310.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 93

 Score = 35.8 bits (81), Expect = 0.76
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+ +  V+   + I + +  +DG   Q ++ +    +                + F FD
Sbjct: 3   EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTALNKLMKAYCERQGLAMRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L++EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|47229942|emb|CAG10356.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 87

 Score = 35.4 bits (80), Expect = 0.87
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 51  IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 84



>gi|1770517|emb|CAA67896.1| SMT3A protein [Homo sapiens]
          Length = 103

 Score = 35.4 bits (80), Expect = 0.87
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+ +  V+   + I + +  +DG   Q ++ +                 +   + F FD
Sbjct: 3   EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTSLSKLMKAYCERQGLSMRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L +EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLRMEDEDTIDVFQQQT 90



>gi|21361388|ref|NP_008868.2| SMT3 suppressor of mif two 3 homolog 2; SMT3 (suppressor of mif two
           3, yeast) homolog 2 [Homo sapiens]
 gi|14250087|gb|AAH08450.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
          Length = 95

 Score = 35.4 bits (80), Expect = 0.93
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 58  IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 91



>gi|49899212|gb|AAH75786.1| Unknown (protein for MGC:86902) [Danio rerio]
          Length = 94

 Score = 35.4 bits (80), Expect = 0.97
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQ-QMRVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           +E+    V+   + I + +  +DG   Q ++ +                 +   + F FD
Sbjct: 3   EEKPREGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFD 62

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G+ IN + TP  L++EDED I+V ++Q+
Sbjct: 63  GQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|19111164|ref|NP_579932.1| SMT3 (supressor of mif two, 3) homolog 2; SMT3 (supressor of mif
           two, 3) homolog 2 (S. cerevisiae) [Mus musculus]
 gi|19424298|ref|NP_598278.1| SMT3 suppressor of mif two 3 homolog 2 [Rattus norvegicus]
 gi|20913673|ref|XP_122275.1| SMT3 (supressor of mif two, 3) homolog 2 [Mus musculus]
 gi|27807481|ref|NP_777194.1| ubiquitin-like protein SMT3B [Bos taurus]
 gi|47522794|ref|NP_999149.1| MIF2 suppressor [Sus scrofa]
 gi|48429127|sp|P61958|SM32_PIG Ubiquitin-like protein SMT3B (Sentrin 2) (MIF2 suppressor)
 gi|48429128|sp|P61959|SM32_RAT Ubiquitin-like protein SMT3B (Sentrin 2)
 gi|48429129|sp|P61955|SM32_BOVIN Ubiquitin-like protein SMT3B (Sentrin 2)
 gi|48429130|sp|P61956|SM32_HUMAN Ubiquitin-like protein SMT3B (Sentrin 2) (HSMT3)
 gi|48429131|sp|P61957|SM32_MOUSE Ubiquitin-like protein SMT3B (Sentrin 2)
 gi|2135401|pir||JC4760 SMT3 protein - human
 gi|1770519|emb|CAA67897.1| SMT3B protein [Homo sapiens]
 gi|1888536|gb|AAB49682.1| ubiquitin-like protein [Bos taurus]
 gi|5566606|gb|AAD45399.1| MIF2 suppressor [Homo sapiens]
 gi|12849483|dbj|BAB28360.1| unnamed protein product [Mus musculus]
 gi|16877005|gb|AAH16775.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
 gi|17028412|gb|AAH17522.1| SMT3 (supressor of mif two, 3) homolog 2 [Mus musculus]
 gi|17467272|gb|AAL40136.1| MIF2 suppressor [Mus musculus]
 gi|17467358|gb|AAL40163.1| MIF2 suppressor [Sus scrofa]
 gi|17467395|gb|AAL40175.1| MIF2 suppressor [Rattus norvegicus]
 gi|18490626|gb|AAH22340.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
 gi|26351521|dbj|BAC39397.1| unnamed protein product [Mus musculus]
 gi|34849732|gb|AAH58446.1| SMT3 suppressor of mif two 3 homolog 2 [Rattus norvegicus]
 gi|38541188|gb|AAH62713.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
 gi|38570350|gb|AAR24618.1| MIF2 suppressor [Cricetulus griseus]
 gi|46250410|gb|AAH68465.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
 gi|47124500|gb|AAH70159.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
 gi|47940079|gb|AAH71645.1| SUMO2 protein [Homo sapiens]
 gi|47940469|gb|AAH71646.1| SMT3 suppressor of mif two 3 homolog 2 [Homo sapiens]
          Length = 95

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 58  IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 91



>gi|34876663|ref|XP_217413.2| similar to Chain  , Structure Determination Of The Small
           Ubiquitin-Related Modifier Sumo-1, Nmr, 10 Structures
           [Rattus norvegicus]
          Length = 196

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 15/36 (41%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  + TP++L +E+ED+IEV ++Q+
Sbjct: 155 NSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQT 190



>gi|49256565|gb|AAH72995.1| Unknown (protein for MGC:82571) [Xenopus laevis]
          Length = 95

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 58  IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 91



>gi|34849696|gb|AAH58303.1| Zgc:65847 protein [Danio rerio]
 gi|46250368|gb|AAH68341.1| Zgc:85643 protein [Danio rerio]
          Length = 94

 Score = 35.0 bits (79), Expect = 1.3
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 57  IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 90



>gi|31200225|ref|XP_309060.1| ENSANGP00000019625 [Anopheles gambiae]
 gi|21292650|gb|EAA04795.1| ENSANGP00000019625 [Anopheles gambiae str. PEST]
          Length = 199

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 157 IVISIQDKDGQQQMR--VYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQDL 214
           I + +Q +  +Q +R  + K++                P D+   FDGE +  +  P+DL
Sbjct: 126 ITLKVQMEKRKQPLRLQIDKNQTMSVLVIKCAEELKCEPKDIRLYFDGELVGNNDKPEDL 185

Query: 215 DLEDEDMIEVR 225
           DLE ++++++R
Sbjct: 186 DLEGDEILDIR 196



>gi|46915170|emb|CAG21943.1| putative penicillin-binding protein 2 [Photobacterium profundum]
          Length = 684

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 19  LFDYKRVQPRMTFCFDDSDLEVADIFKYCNKRPKVHTSTEEGKPDEEVAAAKVVVLDEE 77
           + DY  V+P +    D S+L    +  +  +   VH +T+   P +E+A  KV VLD E
Sbjct: 621 IMDYVLVKPTINLDADPSNLPPDQLMTHDGRHVNVHKNTQTALPKKELAHHKVKVLDSE 679



>gi|45383836|ref|NP_989466.1| ubiquitin-like 1 (sentrin) [Gallus gallus]
 gi|19110797|gb|AAL85281.1| sentrin [Gallus gallus]
          Length = 101

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 15/36 (41%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  + TP++L +E+ED+IEV ++Q+
Sbjct: 60  NSLRFLFEGQRITDNHTPKELGMEEEDVIEVYQEQT 95



>gi|46228698|gb|EAK89568.1| similar to ubiquitin-like protein SMT3 (SUMO), Pf besthit 23613081,
           transcripts identified by EST [Cryptosporidium parvum]
          Length = 122

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 155 EKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQD 213
           + + + ++  DG+Q + R+ K  +              N   + F+F+GE++ P  T +D
Sbjct: 41  QYVTVKVRSPDGEQVLYRIKKKTRLQKLMNSFCQRTGQNEQSIRFLFEGERLRPEMTAED 100

Query: 214 LDLEDEDMIEVRRKQ 228
             L++ D+I+    Q
Sbjct: 101 AGLQEGDLIDAMISQ 115



>gi|49900045|gb|AAH77048.1| Unknown (protein for MGC:89967) [Xenopus tropicalis]
          Length = 102

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 15/36 (41%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I+   TP++L +E+ED+IEV ++Q+
Sbjct: 61  NSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQT 96



>gi|42490984|gb|AAH66306.1| SUMO1 protein [Homo sapiens]
          Length = 101

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 15/36 (41%), Positives = 30/36 (83%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  ++TP++L +E+ED+IEV ++Q+
Sbjct: 60  NSLRFLFEGQRIADNNTPKELGMEEEDVIEVYQEQT 95



>gi|28277282|gb|AAH45271.1| Smt3h2-prov protein [Xenopus laevis]
          Length = 95

 Score = 34.7 bits (78), Expect = 1.8
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++EDED I+V ++Q+
Sbjct: 58  IRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQT 91



>gi|41351308|gb|AAH65723.1| Unknown (protein for MGC:71987) [Homo sapiens]
          Length = 101

 Score = 34.7 bits (78), Expect = 1.8
 Identities = 15/35 (42%), Positives = 28/35 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           + L F+F+G++I  + TP++L +E+ED+IEV ++Q
Sbjct: 60  NSLRFLFEGQRIADNHTPEELGMEEEDVIEVYQEQ 94



>gi|3892023|pdb|1A5R|  Structure Determination Of The Small Ubiquitin-Related Modifier
           Sumo-1, Nmr, 10 Structures
          Length = 103

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 15/36 (41%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  + TP++L +E+ED+IEV ++Q+
Sbjct: 62  NSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQT 97



>gi|41151251|ref|XP_372870.1| similar to Ubiquitin-like protein SMT3C precursor
           (Ubiquitin-homology domain protein PIC1) (Ubiquitin-like
           protein UBL1) (Ubiquitin-related protein SUMO-1) (GAP
           modifying protein 1) (GMP1) (Sentrin) [Homo sapiens]
          Length = 117

 Score = 34.3 bits (77), Expect = 2.0
 Identities = 15/35 (42%), Positives = 28/35 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           + L F+F+G++I  + TP++L +E+ED+IEV ++Q
Sbjct: 76  NSLRFLFEGQRIADNHTPEELGMEEEDVIEVYQEQ 110



>gi|2791892|emb|CAB09807.1| SUMO-1 protein [Xenopus laevis]
          Length = 102

 Score = 34.3 bits (77), Expect = 2.0
 Identities = 15/36 (41%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I+   TP++L +E+ED+IEV ++Q+
Sbjct: 61  NSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQT 96



>gi|4507801|ref|NP_003343.1| SMT3 suppressor of mif two 3 homolog 1; Ubiquitin-like 1;
           ubiquitin-like 1, 12kD; ubiquitin-like 1 (sentrin) [Homo
           sapiens]
 gi|6678489|ref|NP_033486.1| SMT3 suppressor of mif two 3 homolog 1; ubiquitin-like 1 [Mus
           musculus]
 gi|2501446|sp|Q93068|SM33_HUMAN Ubiquitin-like protein SMT3C precursor (Ubiquitin-homology domain
           protein PIC1) (Ubiquitin-like protein UBL1)
           (Ubiquitin-related protein SUMO-1) (GAP modifying
           protein 1) (GMP1) (Sentrin)
 gi|1518694|gb|AAB40388.1| ubiquitin-homology domain protein PIC1
 gi|1574948|gb|AAC50733.1| similar to ubiquitin and to yeast Smt3p (suppressor of MIF2);
           Method: conceptual translation supplied by author
 gi|1703503|gb|AAB40390.1| gap modifying protein 1 [Homo sapiens]
 gi|1762973|gb|AAC50996.1| SUMO-1 [Homo sapiens]
 gi|1769602|gb|AAB39999.1| sentrin [Homo sapiens]
 gi|1770521|emb|CAA67898.1| SMT3C protein [Homo sapiens]
 gi|2645737|gb|AAC39959.1| ubiquitin-homology domain protein [Mus musculus]
 gi|12832591|dbj|BAB22172.1| unnamed protein product [Mus musculus]
 gi|12846959|dbj|BAB27379.1| unnamed protein product [Mus musculus]
 gi|13623671|gb|AAH06462.1| SUMO1 protein [Homo sapiens]
 gi|21104414|dbj|BAB93477.1| ubiquitin-homology domain protein PIC1 [Homo sapiens]
 gi|26354222|dbj|BAC40739.1| unnamed protein product [Mus musculus]
 gi|30582103|gb|AAP35278.1| ubiquitin-like 1 (sentrin) [Homo sapiens]
 gi|31565512|gb|AAH53528.1| SUMO1 protein [Homo sapiens]
 gi|49457290|emb|CAG46944.1| UBL1 [Homo sapiens]
 gi|49457308|emb|CAG46953.1| UBL1 [Homo sapiens]
          Length = 101

 Score = 34.3 bits (77), Expect = 2.2
 Identities = 15/36 (41%), Positives = 29/36 (80%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  + TP++L +E+ED+IEV ++Q+
Sbjct: 60  NSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQT 95



>gi|9664277|gb|AAF97049.1| sentrin [Cervus nippon]
          Length = 101

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 15/36 (41%), Positives = 28/36 (77%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G++I  + TP++L +E+ED+IEV  +Q+
Sbjct: 60  NSLRFLFEGQRIADNHTPKELGMEEEDVIEVYHEQT 95



>gi|29247808|gb|EAA39359.1| GLP_336_5901_6209 [Giardia lamblia ATCC 50803]
          Length = 102

 Score = 33.9 bits (76), Expect = 2.7
 Identities = 14/34 (41%), Positives = 25/34 (73%)

Query: 195 DLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQ 228
           D+ F F+G +++ ++TP+ LD+ + D+IEV R Q
Sbjct: 65  DVRFYFNGARVSDTATPKSLDMAENDIIEVMRNQ 98



>gi|34907008|ref|NP_914851.1| putative ubiquitin-like protein [Oryza sativa (japonica
           cultivar-group)]
 gi|19386771|dbj|BAB86152.1| putative ubiquitin-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 101

 Score = 33.5 bits (75), Expect = 3.2
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           DE+     E     I + ++ +DG +   R+ +  +              +   ++F+FD
Sbjct: 8   DEKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDIKSIAFLFD 67

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G ++N   TP  L++ED D I+    Q+
Sbjct: 68  GRRLNAEQTPDQLEMEDGDEIDAMLHQT 95



>gi|1707372|emb|CAA67923.1| ubiquitin-like protein [Arabidopsis thaliana]
          Length = 104

 Score = 33.5 bits (75), Expect = 3.6
 Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFD 201
           ++E + +       I + ++ +DG +   R+ +  +              + + ++F+FD
Sbjct: 4   NQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFD 63

Query: 202 GEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           G ++    TP +LD+ED D I+    Q+
Sbjct: 64  GRRLRAEQTPDELDMEDGDEIDAMLHQT 91



>gi|17137634|ref|NP_477411.1| CG4494-PA [Drosophila melanogaster]
 gi|4377732|gb|AAD19219.1| ubiquitin-like protein SMT3 [Drosophila melanogaster]
 gi|6934292|gb|AAF31702.1| Smt3 [Drosophila melanogaster]
 gi|7297204|gb|AAF52470.1| CG4494-PA [Drosophila melanogaster]
 gi|16768838|gb|AAL28638.1| LD07775p [Drosophila melanogaster]
          Length = 90

 Score = 33.5 bits (75), Expect = 3.8
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ IN + TP  L++E+ D IEV ++Q+
Sbjct: 53  VRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQT 86



>gi|13386248|ref|NP_081946.1| RIKEN cDNA 4933411G06 [Mus musculus]
 gi|12855681|dbj|BAB30417.1| unnamed protein product [Mus musculus]
          Length = 117

 Score = 33.1 bits (74), Expect = 4.6
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + L F+F+G+KI    T ++L +E+ED+IEV ++Q+
Sbjct: 59  NSLRFLFEGQKIADDHTAEELGMEEEDVIEVHQEQT 94



>gi|34393565|dbj|BAC83163.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 110

 Score = 33.1 bits (74), Expect = 4.9
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 143 DEESEPQVEKAREKIVISIQDKDGQ---QQMRVYKDEKFDXXXXXXXXXXXXNPSDLSFV 199
           D+   P  ++A E + + +QD DG+   + MR  +  +                    F+
Sbjct: 17  DDGKTPAAKRAGEYVTLKVQDTDGRAVYRTMRWTEQLQGLMDFYYDRAHGRVQRGTGRFL 76

Query: 200 FDGEKINPSSTPQDLDLEDEDMIE 223
           +DG +++   TP +LD+ED D ++
Sbjct: 77  YDGRRLSGWQTPAELDMEDGDEVD 100



>gi|23613081|ref|NP_703403.1| ubiquitin-like protein, putative [Plasmodium falciparum 3D7]
 gi|23504543|emb|CAD51423.1| ubiquitin-like protein, putative [Plasmodium falciparum 3D7]
          Length = 100

 Score = 32.7 bits (73), Expect = 5.9
 Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 150 VEKAREKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPS 208
           V    E I + ++  DG +   ++ +  K +            +   + F++DG++I+  
Sbjct: 16  VNNQGEHIQVKVRSPDGAEVFFKIKRKTKLEKLMEVYCNRLGQSMEAVRFLYDGDRIHGD 75

Query: 209 STPQDLDLEDEDMIEVRRKQS 229
           +TP+ L +ED D+I+   +Q+
Sbjct: 76  NTPEQLGIEDGDVIDAMVQQT 96



>gi|23130063|ref|ZP_00111882.1| COG1208: Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits
           (eIF-2Bgamma/eIF-2Bepsilon) [Nostoc punctiforme]
          Length = 389

 Score = 32.7 bits (73), Expect = 6.5
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 5   GEVDSAAGG----EDLEPLFDYKRVQPRMTFCFDD-SDLEVADIFKYCNKRPKVHTSTEE 59
           GE   +AGG    +D  P FD   V      C D   DL++    K+   +  + T   +
Sbjct: 90  GEAIGSAGGMRRIQDFSPFFDDTFV----VLCGDALIDLDLTAAVKWHRAKGSIATIITK 145

Query: 60  GKPDEEVAAAKVVVLDEE 77
             P EEV++  VVV DEE
Sbjct: 146 SVPQEEVSSYGVVVTDEE 163



>gi|16119340|ref|NP_396046.1| AGR_pAT_164p [Agrobacterium tumefaciens str. C58]
 gi|15161858|gb|AAK90487.1| AGR_pAT_164p [Agrobacterium tumefaciens str. C58]
          Length = 1609

 Score = 32.7 bits (73), Expect = 6.5
 Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 22/124 (17%)

Query: 65  EVAAAKVVVLDEEDWLQPPPPKAAFRATAEEDSAFREL---RLKKQEWAKFA-------- 113
           E A AKVV++ +   LQP    AAFRA +E    F EL   R +++EWA+ A        
Sbjct: 569 EEAGAKVVLVGDAMQLQPIQAGAAFRAISER-IGFAELAGVRRQREEWAREASRLFACGK 627

Query: 114 -ESAEDILQKLDEITNKEVGPKEPPEQIILDEESEPQVEKAREKIVISIQDKDGQQQMRV 172
            E   D   +   I   E    E  E+I+ D  S      AR +++   Q  D +Q +R+
Sbjct: 628 VEEGLDAYAQRGRIVEAE-SRAEAVERIVADWTS------ARRELI--QQHADKEQPVRL 678

Query: 173 YKDE 176
             DE
Sbjct: 679 RGDE 682



>gi|17938697|ref|NP_535485.1| conjugal transfer protein [Agrobacterium tumefaciens str. C58]
 gi|25377469|pir||AC3173 conjugal transfer protein traA [imported] - Agrobacterium
           tumefaciens (strain C58, Dupont) plasmid AT
 gi|17743538|gb|AAL45801.1| conjugal transfer protein [Agrobacterium tumefaciens str. C58]
          Length = 1542

 Score = 32.7 bits (73), Expect = 6.5
 Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 22/124 (17%)

Query: 65  EVAAAKVVVLDEEDWLQPPPPKAAFRATAEEDSAFREL---RLKKQEWAKFA-------- 113
           E A AKVV++ +   LQP    AAFRA +E    F EL   R +++EWA+ A        
Sbjct: 502 EEAGAKVVLVGDAMQLQPIQAGAAFRAISER-IGFAELAGVRRQREEWAREASRLFACGK 560

Query: 114 -ESAEDILQKLDEITNKEVGPKEPPEQIILDEESEPQVEKAREKIVISIQDKDGQQQMRV 172
            E   D   +   I   E    E  E+I+ D  S      AR +++   Q  D +Q +R+
Sbjct: 561 VEEGLDAYAQRGRIVEAE-SRAEAVERIVADWTS------ARRELI--QQHADKEQPVRL 611

Query: 173 YKDE 176
             DE
Sbjct: 612 RGDE 615



>gi|15240472|ref|NP_200328.1| small ubiquitin-like modifier 3 (SUMO) [Arabidopsis thaliana]
 gi|9758114|dbj|BAB08586.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|22652846|gb|AAN03847.1| small ubiquitin-like modifier 3 [Arabidopsis thaliana]
          Length = 111

 Score = 32.7 bits (73), Expect = 6.7
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 144 EESEPQVEKAREKIVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDG 202
           ++ +P  ++    +++ ++ +DG + + +  K                      +F+F+G
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 203 EKINPSSTPQDLDLEDEDMIEVRRKQS 229
            +I    TP +LD+ED D+I+  R  S
Sbjct: 65  ARIGGLETPDELDMEDGDVIDACRAMS 91



>gi|7488638|pir||T09529 ubiquitin-like protein - chickpea
 gi|2558518|emb|CAA05079.1| Ubiquitin-like protein [Cicer arietinum]
          Length = 115

 Score = 32.3 bits (72), Expect = 7.6
 Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 157 IVISIQDKDGQQQM-RVYKDEKFDXXXXXXXXXXXXNPSDLSFVFDGEKINPSSTPQDLD 215
           I + ++ +DG +   R+ ++ +              + + ++F+FDG ++    TP +LD
Sbjct: 24  INLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELD 83

Query: 216 LEDEDMIEVRRKQS 229
           +ED D I+    Q+
Sbjct: 84  MEDGDEIDAMLHQT 97



>gi|47214992|emb|CAG03132.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 93

 Score = 32.3 bits (72), Expect = 8.7
 Identities = 15/34 (44%), Positives = 25/34 (73%)

Query: 196 LSFVFDGEKINPSSTPQDLDLEDEDMIEVRRKQS 229
           + F FDG+ I+ + TP  L++EDED I+V ++Q+
Sbjct: 58  IRFRFDGQPISETDTPAGLEMEDEDTIDVFQQQT 91



>gi|49647993|emb|CAG82446.1| unnamed protein product [Yarrowia lipolytica]
          Length = 399

 Score = 32.3 bits (72), Expect = 8.8
 Identities = 16/32 (50%), Positives = 24/32 (75%)

Query: 194 SDLSFVFDGEKINPSSTPQDLDLEDEDMIEVR 225
           + +   FDG+KI+ +ST +  D+EDEDM+EVR
Sbjct: 366 TSVQLYFDGDKIDLNSTIEQADVEDEDMLEVR 397






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Jul 13, 2004  2:03 AM
  Number of letters in database: 641,309,329
  Number of sequences in database:  1,922,832
  
Lambda     K      H
   0.310    0.131    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,402,929
Number of Sequences: 1922832
Number of extensions: 2426019
Number of successful extensions: 6846
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 6742
Number of HSP's gapped (non-prelim): 131
length of query: 229
length of database: 641,309,329
effective HSP length: 121
effective length of query: 108
effective length of database: 408,646,657
effective search space: 44133838956
effective search space used: 44133838956
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 72 (32.3 bits)