RID=1089737078-9234-50780314381.BLASTQ4, Xl

RID=1089737078-9234-50780314381.BLASTQ4, Xl_TC190086 BLASTP 2.2.9 [May-01-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1089737078-9234-50780314381.BLASTQ4
Query= Xl_TC190086 (399 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 1,922,832 sequences; 641,309,329 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Distribution of 42 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34860127|ref|XP_219329.2|  similar to nuclear protein NIP...   130   5e-29
gi|1747519|gb|AAC52963.1|  nuclear protein NIP45 [Mus musculus]   129   1e-28
gi|33468909|ref|NP_035030.1|  nuclear factor of activated T-...   129   1e-28
gi|46447823|ref|NP_116204.3|  nuclear factor of activated T-...   128   2e-28
gi|21360814|gb|AAM49721.1|  hypothetical protein [Homo sapiens]   128   2e-28
gi|12838793|dbj|BAB24331.1|  unnamed protein product [Mus mu...   127   6e-28
gi|11041477|dbj|BAB17279.1|  hypothetical protein [Macaca fa...   122   1e-26
gi|14042298|dbj|BAB55189.1|  unnamed protein product [Homo s...   120   6e-26
gi|45751566|gb|AAH68007.1|  FLJ14639 protein [Homo sapiens]       114   4e-24
gi|13386248|ref|NP_081946.1|  RIKEN cDNA 4933411G06 [Mus mus...    47   8e-04
gi|33304726|gb|AAP34642.1|  small ubiquitin-like modifier [B...    44   0.007
gi|34393563|dbj|BAC83161.1|  hypothetical protein [Oryza sat...    43   0.014
gi|41351308|gb|AAH65723.1|  Unknown (protein for MGC:71987) ...    43   0.016
gi|42490984|gb|AAH66306.1|  SUMO1 protein [Homo sapiens]           42   0.019
gi|41151251|ref|XP_372870.1|  similar to Ubiquitin-like prot...    42   0.026
gi|34912494|ref|NP_917594.1|  putative amino acid or GABA pe...    42   0.031
gi|6691508|dbj|BAA89293.1|  small ubiquitin-related protein ...    42   0.037
gi|45383836|ref|NP_989466.1|  ubiquitin-like 1 (sentrin) [Ga...    41   0.063
gi|9664277|gb|AAF97049.1|  sentrin [Cervus nippon]                 41   0.063
gi|3892023|pdb|1A5R|   Structure Determination Of The Small ...    40   0.065
gi|4507801|ref|NP_003343.1|  SMT3 suppressor of mif two 3 ho...    40   0.073
gi|34876663|ref|XP_217413.2|  similar to Chain  , Structure ...    40   0.093
gi|47218566|emb|CAG10265.1|  unnamed protein product [Tetrao...    40   0.094
gi|47211840|emb|CAF90473.1|  unnamed protein product [Tetrao...    40   0.12 
gi|2791892|emb|CAB09807.1|  SUMO-1 protein [Xenopus laevis]        40   0.14 
gi|33604214|gb|AAH56283.1|  Zgc:65934 protein [Danio rerio] ...    39   0.16 
gi|23613081|ref|NP_703403.1|  ubiquitin-like protein, putati...    38   0.43 
gi|46228698|gb|EAK89568.1|  similar to ubiquitin-like protei...    37   0.63 
gi|17508217|ref|NP_490842.1|  SUMO, small ubiquitin-like mod...    37   0.64 
gi|39589515|emb|CAE74544.1|  Hypothetical protein CBG22301 [...    37   0.65 
gi|46227022|gb|EAK87972.1|  ubiquitin domain at the C-termin...    37   0.83 
gi|49900045|gb|AAH77048.1|  Unknown (protein for MGC:89967) ...    37   0.98 
gi|17137634|ref|NP_477411.1|  CG4494-PA [Drosophila melanoga...    37   1.1  
gi|31200225|ref|XP_309060.1|  ENSANGP00000019625 [Anopheles ...    36   1.4  
gi|49527787|emb|CAG61436.1|  unnamed protein product [Candid...    35   2.6  
gi|8569260|pdb|1EUV|B  Chain B, X-Ray Structure Of The C-Ter...    35   3.1  
gi|1707372|emb|CAA67923.1|  ubiquitin-like protein [Arabidop...    35   3.8  
gi|49641401|emb|CAH01119.1|  unnamed protein product [Kluyve...    35   4.5  
gi|6320718|ref|NP_010798.1|  Protein that may be involved in...    34   5.0  
gi|15240471|ref|NP_200327.1|  small ubiquitin-like modifier ...    34   5.0  
gi|49079730|ref|XP_403478.1|  hypothetical protein UM05863.1...    33   9.7  
gi|15236885|ref|NP_194414.1|  ubiquitin-like protein (SMT3) ...    33   9.8  

Alignments


>gi|34860127|ref|XP_219329.2| similar to nuclear protein NIP45 [Rattus norvegicus]
          Length = 414

 Score =  130 bits (327), Expect = 5e-29
 Identities = 86/209 (41%), Positives = 130/209 (62%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSPGQK----VRAEDSDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+RE++ RL+DL + LSP Q     ++  D +V++V  S  P+     T+K+R    
Sbjct: 210 ALQKLREVNKRLQDLRSCLSPKQHQSPALQNTDDEVVLVEGSVLPQNPRLFTLKIRCRAD 269

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ +   +PL+ V   MAS L V P++ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 270 LVRLPVKTSEPLQNVVDHMASHLGVSPNRILLLFGETELSPTATPRTLKLGVADIIDCVV 329

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +       +D + ++++ ++VQGK+K   L + +    PL+ LM  Y+ AMGL+  HK+S
Sbjct: 330 LA---SSSEDTETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLS-GHKLS 385

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G KL GK    +LGLE  D+IEVW 
Sbjct: 386 FFFDGTKLSGKELPTDLGLESGDLIEVWG 414



>gi|1747519|gb|AAC52963.1| nuclear protein NIP45 [Mus musculus]
          Length = 412

 Score =  129 bits (323), Expect = 1e-28
 Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSPGQK----VRAEDSDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+RE++ RL+DL + LSP Q     +++ D +V++V     P+     T+K+R    
Sbjct: 208 ALQKLREVNKRLQDLRSCLSPKQHQSPALQSTDDEVVLVEGPVLPQSSRLFTLKIRCRAD 267

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ + M +PL+ V   MA+ L V P++ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 268 LVRLPVRMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGVADIIDCVV 327

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +       +  + ++++ ++VQGK+K   L + +    PL+ LM  Y+ AMGL+  HK+S
Sbjct: 328 LA---SSSEATETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLS-GHKLS 383

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G KL GK    +LGLE  D+IEVW 
Sbjct: 384 FFFDGTKLSGKELPADLGLESGDLIEVWG 412



>gi|33468909|ref|NP_035030.1| nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein; nuclear
           factor of activated T-cells, cytoplasmic 2 interacting
           protein [Mus musculus]
 gi|26326089|dbj|BAC26788.1| unnamed protein product [Mus musculus]
          Length = 412

 Score =  129 bits (323), Expect = 1e-28
 Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSPGQK----VRAEDSDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+RE++ RL+DL + LSP Q     +++ D +V++V     P+     T+K+R    
Sbjct: 208 ALQKLREVNKRLQDLRSCLSPKQHQSPALQSTDDEVVLVEGPVLPQSSRLFTLKIRCRAD 267

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ + M +PL+ V   MA+ L V P++ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 268 LVRLPVRMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGVADIIDCVV 327

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +       +  + ++++ ++VQGK+K   L + +    PL+ LM  Y+ AMGL+  HK+S
Sbjct: 328 LA---SSSEATETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLS-GHKLS 383

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G KL GK    +LGLE  D+IEVW 
Sbjct: 384 FFFDGTKLSGKELPADLGLESGDLIEVWG 412



>gi|46447823|ref|NP_116204.3| nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein [Homo
           sapiens]
 gi|22760416|dbj|BAC11189.1| unnamed protein product [Homo sapiens]
          Length = 419

 Score =  128 bits (322), Expect = 2e-28
 Identities = 84/209 (40%), Positives = 132/209 (63%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSP----GQKVRAEDSDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+ E++ RL+DL + LSP    GQ+ + ++ +V++V     PE      +K+R    
Sbjct: 215 ALKKLSEVNKRLQDLRSCLSPKPPQGQEQQGQEDEVVLVEGPTLPETPRLFPLKIRCRAD 274

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ L M +PL+ V   MA+ L V PS+ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 275 LVRLPLRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVV 334

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +T      +  + ++++ ++VQGK+K   L V + +  PL++LM  Y+ AMGL+ + K+S
Sbjct: 335 LT---SSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGR-KLS 390

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G KL G+    +LG+E  D+IEVW 
Sbjct: 391 FFFDGTKLSGRELPADLGMESGDLIEVWG 419



>gi|21360814|gb|AAM49721.1| hypothetical protein [Homo sapiens]
          Length = 419

 Score =  128 bits (321), Expect = 2e-28
 Identities = 84/209 (40%), Positives = 132/209 (63%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSP----GQKVRAEDSDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+ E++ RL+DL + LSP    GQ+ + ++ +V++V     PE      +K+R    
Sbjct: 215 ALKKLSEVNKRLQDLRSCLSPKPPQGQEQQGQEDEVVLVEGPTLPETPRLFPLKIRCRAD 274

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ L M +PL+ V   MA+ L V PS+ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 275 LVRLPLRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVV 334

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +T      +  + ++++ ++VQGK+K   L V + +  PL++LM  Y+ AMGL+ + K+S
Sbjct: 335 LT---SSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGR-KLS 390

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G KL G+    +LG+E  D+IEVW 
Sbjct: 391 FFFDGTKLSGRELPADLGMESGDLIEVWG 419



>gi|12838793|dbj|BAB24331.1| unnamed protein product [Mus musculus]
          Length = 416

 Score =  127 bits (318), Expect = 6e-28
 Identities = 82/209 (39%), Positives = 128/209 (61%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSPGQK----VRAEDSDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+RE++ RL+DL + LSP Q     +++ D +V++V     P+     T+K+R    
Sbjct: 212 ALQKLREVNKRLQDLRSCLSPKQHQSPALQSTDDEVVLVEGPVLPQSSRLFTLKIRCRAD 271

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ + M +PL+ V   MA+ L V P++ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 272 LVRLPVRMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGVADIIDCVV 331

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +       +  + ++++ ++VQGK+K   L + +    PL+ LM  Y+ AMGL+  HK+S
Sbjct: 332 LA---SSSEATETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLS-GHKLS 387

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G    GK    +LGLE  D+IEVW 
Sbjct: 388 FFFDGTNSSGKELPADLGLESGDLIEVWG 416



>gi|11041477|dbj|BAB17279.1| hypothetical protein [Macaca fascicularis]
          Length = 408

 Score =  122 bits (307), Expect = 1e-26
 Identities = 82/209 (39%), Positives = 125/209 (59%), Gaps = 12/209 (5%)

Query: 199 AYNKIREMDARLKDLGTVLSPGQKVRAED----SDVIVVGSSPAPE----LTMKVRRGGK 250
           A  K+ E++ RL+DL + LSP      E      +V++V     PE      +K+R    
Sbjct: 204 ALKKLSEVNKRLQDLRSCLSPEPPQGQEQQGQEDEVVLVEGPTLPETPRLFPLKIRCRAD 263

Query: 251 LFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVV 310
           L R+ L M +PL+ V   MA+ L V PS+ILLL G+ EL+P+ TP ++ L VADIIDCVV
Sbjct: 264 LVRLPLRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVV 323

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           +       +  + + ++ ++VQGK+K   L V + +  PL++LM  Y+ AMGL+ + K+S
Sbjct: 324 LA---SSPEATETSRQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGR-KLS 379

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIEVWA 399
           F+F+G KL G+    +LG+E  D+IEVW 
Sbjct: 380 FFFDGTKLSGRELPADLGMESGDLIEVWG 408



>gi|14042298|dbj|BAB55189.1| unnamed protein product [Homo sapiens]
 gi|17390726|gb|AAH18311.1| FLJ14639 protein [Homo sapiens]
 gi|18204286|gb|AAH21551.1| FLJ14639 protein [Homo sapiens]
          Length = 138

 Score =  120 bits (301), Expect = 6e-26
 Identities = 63/142 (44%), Positives = 96/142 (67%), Gaps = 4/142 (2%)

Query: 258 MWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVVVTPPCDE 317
           M +PL+ V   MA+ L V PS+ILLL G+ EL+P+ TP ++ L VADIIDCVV+T     
Sbjct: 1   MSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLT---SS 57

Query: 318 QKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHK 377
            +  + ++++ ++VQGK+K   L V + +  PL++LM  Y+ AMGL+ + K+SF+F+G K
Sbjct: 58  PEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGR-KLSFFFDGTK 116

Query: 378 LKGKNTAEELGLECDDIIEVWA 399
           L G+    +LG+E  D+IEVW 
Sbjct: 117 LSGRELPADLGMESGDLIEVWG 138



>gi|45751566|gb|AAH68007.1| FLJ14639 protein [Homo sapiens]
          Length = 127

 Score =  114 bits (285), Expect = 4e-24
 Identities = 59/131 (45%), Positives = 90/131 (68%), Gaps = 4/131 (3%)

Query: 269 MASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVVVTPPCDEQKDCDPNEKIS 328
           MA+ L V PS+ILLL G+ EL+P+ TP ++ L VADIIDCVV+T      +  + ++++ 
Sbjct: 1   MATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLT---SSPEATETSQQLQ 57

Query: 329 IKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGKNTAEELG 388
           ++VQGK+K   L V + +  PL++LM  Y+ AMGL+ + K+SF+F+G KL G+    +LG
Sbjct: 58  LRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGR-KLSFFFDGTKLSGRELPADLG 116

Query: 389 LECDDIIEVWA 399
           +E  D+IEVW 
Sbjct: 117 MESGDLIEVWG 127



>gi|13386248|ref|NP_081946.1| RIKEN cDNA 4933411G06 [Mus musculus]
 gi|12855681|dbj|BAB30417.1| unnamed protein product [Mus musculus]
          Length = 117

 Score = 47.0 bits (110), Expect = 8e-04
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 7/82 (8%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           DE+KD      I +KV G+D+ S +   +     L+ L D Y   + L+  + + F FEG
Sbjct: 15  DEKKDV-----IKVKVIGEDR-SEIHFRLKMTTRLKKLKDSYSRRLDLSV-NSLRFLFEG 67

Query: 376 HKLKGKNTAEELGLECDDIIEV 397
            K+   +TAEELG+E +D+IEV
Sbjct: 68  QKIADDHTAEELGMEEEDVIEV 89



>gi|33304726|gb|AAP34642.1| small ubiquitin-like modifier [Bigelowiella natans]
          Length = 90

 Score = 43.9 bits (102), Expect = 0.007
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 2/81 (2%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           +E KD  PNE +++KV+ +D  + +   V K  P + LM+ Y   +G  +K  V F F+G
Sbjct: 2   EETKDQKPNEHLNLKVKSQDG-NEVFFKVKKTTPFKRLMEAYCQKVG-AEKSSVRFLFDG 59

Query: 376 HKLKGKNTAEELGLECDDIIE 396
            ++ G  T  +L ++ +D I+
Sbjct: 60  DRISGDQTPADLDMQDEDEID 80



>gi|34393563|dbj|BAC83161.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 130

 Score = 42.7 bits (99), Expect = 0.014
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 325 EKISIKVQGKDKQSHLSVMVGKVEPLQSLMD-QYQAAMGLTKKHKVSFYFEGHKLKGKNT 383
           E +++KVQG D ++    M+ + E LQ LMD  Y  + G  ++    F F+G +L+G  T
Sbjct: 37  EYVTLKVQGTDGRAVYRTML-RTEELQGLMDFYYDRSHGRVQRGTGRFLFDGRRLRGWQT 95

Query: 384 AEELGLECDD 393
             EL +E  D
Sbjct: 96  PAELQMEDGD 105



>gi|41351308|gb|AAH65723.1| Unknown (protein for MGC:71987) [Homo sapiens]
          Length = 101

 Score = 42.7 bits (99), Expect = 0.016
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 324 NEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGKNT 383
           +E I ++V G+D  S +   V    PL+ L   Y    G+   + + F FEG ++   +T
Sbjct: 19  DEDIKLRVIGQD-SSEIHFKVKMTTPLKKLKKSYCQRQGV-PVNSLRFLFEGQRIADNHT 76

Query: 384 AEELGLECDDIIEVW 398
            EELG+E +D+IEV+
Sbjct: 77  PEELGMEEEDVIEVY 91



>gi|42490984|gb|AAH66306.1| SUMO1 protein [Homo sapiens]
          Length = 101

 Score = 42.4 bits (98), Expect = 0.019
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  ++  D    E I +KV G+D  S +   V     L+ L + Y    G+   + + F 
Sbjct: 8   PSTEDLGDKKEGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFL 65

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   NT +ELG+E +D+IEV+
Sbjct: 66  FEGQRIADNNTPKELGMEEEDVIEVY 91



>gi|41151251|ref|XP_372870.1| similar to Ubiquitin-like protein SMT3C precursor
           (Ubiquitin-homology domain protein PIC1) (Ubiquitin-like
           protein UBL1) (Ubiquitin-related protein SUMO-1) (GAP
           modifying protein 1) (GMP1) (Sentrin) [Homo sapiens]
          Length = 117

 Score = 42.0 bits (97), Expect = 0.026
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  +   D   +E I ++V G+D  S +   V    PL+ L   Y    G+   + + F 
Sbjct: 24  PSTEHLGDKIKDEDIKLRVIGQD-SSEIHFKVKMTTPLKKLKKSYCQRQGV-PVNSLRFL 81

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   +T EELG+E +D+IEV+
Sbjct: 82  FEGQRIADNHTPEELGMEEEDVIEVY 107



>gi|34912494|ref|NP_917594.1| putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
 gi|18677110|dbj|BAB84837.1| putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
 gi|20804797|dbj|BAB92481.1| putative amino acid or GABA permease [Oryza sativa (japonica
           cultivar-group)]
          Length = 766

 Score = 41.6 bits (96), Expect = 0.031
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 322 DPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGK 381
           +  EK+ + VQ  DK  H    + K E    L   Y   + L+    ++F F+G K+  +
Sbjct: 689 EAREKVVVTVQ--DKAGHHQFRLYKDEKFGKLFRAYAKKVNLSVA-DLTFAFDGDKVDAE 745

Query: 382 NTAEELGLECDDIIEV 397
           +T E+LGLE +D++EV
Sbjct: 746 STPEDLGLEDEDMVEV 761



>gi|6691508|dbj|BAA89293.1| small ubiquitin-related protein 1 [Oncorhynchus mykiss]
          Length = 101

 Score = 41.6 bits (96), Expect = 0.037
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 317 EQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGH 376
           +QKD    E I +KV G+D  S +   V     L+ L + Y    G+     + F FEG 
Sbjct: 15  DQKD---GEYIKLKVIGQD-NSEIHFKVKMTTHLKKLKESYSQRQGV-HMSTLRFLFEGQ 69

Query: 377 KLKGKNTAEELGLECDDIIEVW 398
           ++   +T +ELG+E +D+IEV+
Sbjct: 70  RISDNHTPKELGMEDEDVIEVY 91



>gi|45383836|ref|NP_989466.1| ubiquitin-like 1 (sentrin) [Gallus gallus]
 gi|19110797|gb|AAL85281.1| sentrin [Gallus gallus]
          Length = 101

 Score = 40.8 bits (94), Expect = 0.063
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  ++  D    E I +KV G+D  S +   V     L+ L + Y    G+   + + F 
Sbjct: 8   PSAEDLGDKKEGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFL 65

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   +T +ELG+E +D+IEV+
Sbjct: 66  FEGQRITDNHTPKELGMEEEDVIEVY 91



>gi|9664277|gb|AAF97049.1| sentrin [Cervus nippon]
          Length = 101

 Score = 40.8 bits (94), Expect = 0.063
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  ++  D    E I +KV G+D  S +   V     L+ L + Y    G+   + + F 
Sbjct: 8   PSTEDLGDKKEGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFL 65

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   +T +ELG+E +D+IEV+
Sbjct: 66  FEGQRIADNHTPKELGMEEEDVIEVY 91



>gi|3892023|pdb|1A5R|  Structure Determination Of The Small Ubiquitin-Related Modifier
           Sumo-1, Nmr, 10 Structures
          Length = 103

 Score = 40.4 bits (93), Expect = 0.065
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  ++  D    E I +KV G+D  S +   V     L+ L + Y    G+   + + F 
Sbjct: 10  PSTEDLGDKKEGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFL 67

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   +T +ELG+E +D+IEV+
Sbjct: 68  FEGQRIADNHTPKELGMEEEDVIEVY 93



>gi|4507801|ref|NP_003343.1| SMT3 suppressor of mif two 3 homolog 1; Ubiquitin-like 1;
           ubiquitin-like 1, 12kD; ubiquitin-like 1 (sentrin) [Homo
           sapiens]
 gi|6678489|ref|NP_033486.1| SMT3 suppressor of mif two 3 homolog 1; ubiquitin-like 1 [Mus
           musculus]
 gi|2501446|sp|Q93068|SM33_HUMAN Ubiquitin-like protein SMT3C precursor (Ubiquitin-homology domain
           protein PIC1) (Ubiquitin-like protein UBL1)
           (Ubiquitin-related protein SUMO-1) (GAP modifying
           protein 1) (GMP1) (Sentrin)
 gi|1518694|gb|AAB40388.1| ubiquitin-homology domain protein PIC1
 gi|1574948|gb|AAC50733.1| similar to ubiquitin and to yeast Smt3p (suppressor of MIF2);
           Method: conceptual translation supplied by author
 gi|1703503|gb|AAB40390.1| gap modifying protein 1 [Homo sapiens]
 gi|1762973|gb|AAC50996.1| SUMO-1 [Homo sapiens]
 gi|1769602|gb|AAB39999.1| sentrin [Homo sapiens]
 gi|1770521|emb|CAA67898.1| SMT3C protein [Homo sapiens]
 gi|2645737|gb|AAC39959.1| ubiquitin-homology domain protein [Mus musculus]
 gi|12832591|dbj|BAB22172.1| unnamed protein product [Mus musculus]
 gi|12846959|dbj|BAB27379.1| unnamed protein product [Mus musculus]
 gi|13623671|gb|AAH06462.1| SUMO1 protein [Homo sapiens]
 gi|21104414|dbj|BAB93477.1| ubiquitin-homology domain protein PIC1 [Homo sapiens]
 gi|26354222|dbj|BAC40739.1| unnamed protein product [Mus musculus]
 gi|30582103|gb|AAP35278.1| ubiquitin-like 1 (sentrin) [Homo sapiens]
 gi|31565512|gb|AAH53528.1| SUMO1 protein [Homo sapiens]
 gi|49457290|emb|CAG46944.1| UBL1 [Homo sapiens]
 gi|49457308|emb|CAG46953.1| UBL1 [Homo sapiens]
          Length = 101

 Score = 40.4 bits (93), Expect = 0.073
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  ++  D    E I +KV G+D  S +   V     L+ L + Y    G+   + + F 
Sbjct: 8   PSTEDLGDKKEGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFL 65

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   +T +ELG+E +D+IEV+
Sbjct: 66  FEGQRIADNHTPKELGMEEEDVIEVY 91



>gi|34876663|ref|XP_217413.2| similar to Chain  , Structure Determination Of The Small
           Ubiquitin-Related Modifier Sumo-1, Nmr, 10 Structures
           [Rattus norvegicus]
          Length = 196

 Score = 40.0 bits (92), Expect = 0.093
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P  ++  D    E I +KV G+D  S +   V     L+ L + Y    G+   + + F 
Sbjct: 103 PSTEDLGDKKEGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFL 160

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++   +T +ELG+E +D+IEV+
Sbjct: 161 FEGQRIADNHTPKELGMEEEDVIEVY 186



>gi|47218566|emb|CAG10265.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 94

 Score = 40.0 bits (92), Expect = 0.094
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P   +  D    E I +KV G+D  S +   V     L+ L + Y    G+     + F 
Sbjct: 4   PSSHDGGDKKDGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYSQRQGVPAS-TLRFL 61

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++    T +ELG+E +D+IEV+
Sbjct: 62  FEGQRIADNQTPKELGMEDEDVIEVY 87



>gi|47211840|emb|CAF90473.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 97

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 313 PPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFY 372
           P   +  D    E I +KV G+D  S +   V     L+ L + Y    G+     + F 
Sbjct: 8   PSSHDGGDKKDGEYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYSQRQGVPAS-TLRFL 65

Query: 373 FEGHKLKGKNTAEELGLECDDIIEVW 398
           FEG ++    T +ELG+E +D+IEV+
Sbjct: 66  FEGQRIADNQTPKELGMEDEDVIEVY 91



>gi|2791892|emb|CAB09807.1| SUMO-1 protein [Xenopus laevis]
          Length = 102

 Score = 39.7 bits (91), Expect = 0.14
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 322 DPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGK 381
           D  + I +KV G+D  S +   V     L+ L + Y+   G+   + + F FEG ++   
Sbjct: 18  DGGDYIKLKVIGQD-SSEIHFKVKMTTHLKKLKESYRQRQGV-PMNSLRFLFEGQRISDH 75

Query: 382 NTAEELGLECDDIIEVW 398
            T +ELG+E +D+IEV+
Sbjct: 76  QTPKELGMEEEDVIEVY 92



>gi|33604214|gb|AAH56283.1| Zgc:65934 protein [Danio rerio]
 gi|45709326|gb|AAH67553.1| Zgc:85634 protein [Danio rerio]
          Length = 100

 Score = 39.3 bits (90), Expect = 0.16
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 312 TPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSF 371
           T P  +  +    E I +KV G+D  S +   V     L+ L + Y    G+   + + F
Sbjct: 6   TKPSSDGGEKKDGEYIKLKVIGQD-NSEIHFKVKMTTHLKKLKESYSQRQGV-PVNSLRF 63

Query: 372 YFEGHKLKGKNTAEELGLECDDIIEVW 398
            FEG ++    T +ELG+E +D+IEV+
Sbjct: 64  LFEGQRITDNLTPKELGMEDEDVIEVY 90



>gi|23613081|ref|NP_703403.1| ubiquitin-like protein, putative [Plasmodium falciparum 3D7]
 gi|23504543|emb|CAD51423.1| ubiquitin-like protein, putative [Plasmodium falciparum 3D7]
          Length = 100

 Score = 37.7 bits (86), Expect = 0.43
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 325 EKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGKNTA 384
           E I +KV+  D  + +   + +   L+ LM+ Y   +G + +  V F ++G ++ G NT 
Sbjct: 21  EHIQVKVRSPDG-AEVFFKIKRKTKLEKLMEVYCNRLGQSME-AVRFLYDGDRIHGDNTP 78

Query: 385 EELGLECDDIIE 396
           E+LG+E  D+I+
Sbjct: 79  EQLGIEDGDVID 90



>gi|46228698|gb|EAK89568.1| similar to ubiquitin-like protein SMT3 (SUMO), Pf besthit 23613081,
           transcripts identified by EST [Cryptosporidium parvum]
          Length = 122

 Score = 37.4 bits (85), Expect = 0.63
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 322 DPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGK 381
           D ++ +++KV+  D +  L   + K   LQ LM+ +    G   +  + F FEG +L+ +
Sbjct: 38  DDSQYVTVKVRSPDGEQVL-YRIKKKTRLQKLMNSFCQRTG-QNEQSIRFLFEGERLRPE 95

Query: 382 NTAEELGLECDDIIE 396
            TAE+ GL+  D+I+
Sbjct: 96  MTAEDAGLQEGDLID 110



>gi|17508217|ref|NP_490842.1| SUMO, small ubiquitin-like modifier, SUMO, small ubiquitin-like
           modifier SMO-1 (10.2 kD) (smo-1) [Caenorhabditis
           elegans]
 gi|2501447|sp|P55853|SMT3_CAEEL Ubiquitin-like protein SMT3
 gi|7446815|pir||JC5582 SMT3 protein - Caenorhabditis elegans
 gi|1707420|emb|CAA67914.1| ubiquitin-like protein [Caenorhabditis elegans]
 gi|2341095|gb|AAB67608.1| ubiquitin-like protein [Caenorhabditis elegans]
 gi|13324997|gb|AAK18969.1| Sumo (ubiquitin-related) homolog protein 1 [Caenorhabditis elegans]
          Length = 91

 Score = 37.4 bits (85), Expect = 0.64
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 316 DEQKDCDPNEKISIKVQGKD-KQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFE 374
           D  +  D  E I IKV G+D  + H  V  G    +  L   Y    G+   + + F F+
Sbjct: 4   DAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGT--SMAKLKKSYADRTGVAV-NSLRFLFD 60

Query: 375 GHKLKGKNTAEELGLECDDIIEVW 398
           G ++   +T + L +E DD+IEV+
Sbjct: 61  GRRINDDDTPKTLEMEDDDVIEVY 84



>gi|39589515|emb|CAE74544.1| Hypothetical protein CBG22301 [Caenorhabditis briggsae]
 gi|39598393|emb|CAE69086.1| Hypothetical protein CBG15104 [Caenorhabditis briggsae]
          Length = 95

 Score = 37.4 bits (85), Expect = 0.65
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 322 DPNEKISIKVQGKD-KQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKG 380
           D  E I IKV G+D  + H  V  G    +  L   Y    G++  + + F F+G ++  
Sbjct: 14  DNAEYIKIKVVGQDSNEVHFRVKFGT--SMAKLKKSYADRTGVSV-NSLRFLFDGRRIND 70

Query: 381 KNTAEELGLECDDIIEVW 398
           ++T + L +E DD+IEV+
Sbjct: 71  EDTPKSLEMEDDDVIEVY 88



>gi|46227022|gb|EAK87972.1| ubiquitin domain at the C-terminus [Cryptosporidium parvum]
          Length = 1074

 Score = 37.0 bits (84), Expect = 0.83
 Identities = 14/61 (22%), Positives = 34/61 (55%)

Query: 252  FRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMNLTVADIIDCVVV 311
             R N  M  P  ++A+S +  +N+  + ++ +  D E++ + +P+  N++  D I+ ++ 
Sbjct: 992  LRFNASMSTPFSRLAESYSRNVNISVTDVMFIYKDSEIDLNLSPYDYNVSENDTIEVILR 1051

Query: 312  T 312
            T
Sbjct: 1052 T 1052



>gi|49900045|gb|AAH77048.1| Unknown (protein for MGC:89967) [Xenopus tropicalis]
          Length = 102

 Score = 36.6 bits (83), Expect = 0.98
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 327 ISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHKLKGKNTAEE 386
           I +KV G+D  S +   V     L+ L + Y    G+   + + F FEG ++    T +E
Sbjct: 23  IKLKVIGQD-SSEIHFKVKMTTHLKKLKESYCQRQGV-PMNSLRFLFEGQRISDHQTPKE 80

Query: 387 LGLECDDIIEVW 398
           LG+E +D+IEV+
Sbjct: 81  LGMEEEDVIEVY 92



>gi|17137634|ref|NP_477411.1| CG4494-PA [Drosophila melanogaster]
 gi|4377732|gb|AAD19219.1| ubiquitin-like protein SMT3 [Drosophila melanogaster]
 gi|6934292|gb|AAF31702.1| Smt3 [Drosophila melanogaster]
 gi|7297204|gb|AAF52470.1| CG4494-PA [Drosophila melanogaster]
 gi|16768838|gb|AAL28638.1| LD07775p [Drosophila melanogaster]
          Length = 90

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           DE+K  +  E I++KV G+D  + +   + K  PL+ LM+ Y    GL+ +  V F F+G
Sbjct: 3   DEKKGGE-TEHINLKVLGQD-NAVVQFKIKKHTPLRKLMNAYCDRAGLSMQ-VVRFRFDG 59

Query: 376 HKLKGKNTAEELGLECDDIIEVW 398
             +   +T   L +E  D IEV+
Sbjct: 60  QPINENDTPTSLEMEEGDTIEVY 82



>gi|31200225|ref|XP_309060.1| ENSANGP00000019625 [Anopheles gambiae]
 gi|21292650|gb|EAA04795.1| ENSANGP00000019625 [Anopheles gambiae str. PEST]
          Length = 199

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 33/164 (20%), Positives = 72/164 (43%), Gaps = 7/164 (4%)

Query: 240 ELTMKVRRGGKLFRINLGMWDPLEKVAQSMASQLNVDPSQILLLLGDEELNPSHTPHSMN 299
           E+ +K++ G  +       +   E +   +A++ + D + I L L D  +  S TP S++
Sbjct: 33  EMRIKIKWGRGIETFVHRRYQKFEDIFNQLAAKESADRACIFLNLDDRIVYASDTPDSID 92

Query: 300 LTVADIIDCVV------VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSL 353
                 I   +      + P          +  I++KVQ + ++  L + + K + +  L
Sbjct: 93  YKPHQFIAGRILKTKAPILPTAHGSSTGHNSNMITLKVQMEKRKQPLRLQIDKNQTMSVL 152

Query: 354 MDQYQAAMGLTKKHKVSFYFEGHKLKGKNTAEELGLECDDIIEV 397
           + +    +    K  +  YF+G  +   +  E+L LE D+I+++
Sbjct: 153 VIKCAEELKCEPK-DIRLYFDGELVGNNDKPEDLDLEGDEILDI 195



>gi|49527787|emb|CAG61436.1| unnamed protein product [Candida glabrata]
          Length = 108

 Score = 35.4 bits (80), Expect = 2.6
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 311 VTPPCDEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVS 370
           V P    Q D  P  +  I ++  D  S +   + K  PL+ LM+ +    G  +   + 
Sbjct: 15  VKPDLQGQGDA-PKSETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQG-KEMDSLR 72

Query: 371 FYFEGHKLKGKNTAEELGLECDDIIE 396
           F ++G +++   T E+L +E +D+IE
Sbjct: 73  FLYDGLRIQADQTPEDLDMEDNDLIE 98



>gi|8569260|pdb|1EUV|B Chain B, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In
           Complex With Smt3, The Yeast Ortholog Of Sumo.
          Length = 86

 Score = 35.0 bits (79), Expect = 3.1
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 318 QKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHK 377
           + +  P   I++KV   D  S +   + K  PL+ LM+ +    G  +   + F ++G +
Sbjct: 3   KPEVKPETHINLKVS--DGSSEIFFKIKKTTPLRRLMEAFAKRQG-KEMDSLRFLYDGIR 59

Query: 378 LKGKNTAEELGLECDDIIE 396
           ++   T E+L +E +DIIE
Sbjct: 60  IQADQTPEDLDMEDNDIIE 78



>gi|1707372|emb|CAA67923.1| ubiquitin-like protein [Arabidopsis thaliana]
          Length = 104

 Score = 34.7 bits (78), Expect = 3.8
 Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           +++K  D    I++KV+G+D  + +   + +   L+ LM+ Y     +   + ++F F+G
Sbjct: 7   EDKKPGDGGAHINLKVKGQDG-NEVFFRIKRSTQLKKLMNAYCDRQSV-DMNSIAFLFDG 64

Query: 376 HKLKGKNTAEELGLECDDIIE 396
            +L+ + T +EL +E  D I+
Sbjct: 65  RRLRAEQTPDELDMEDGDEID 85



>gi|49641401|emb|CAH01119.1| unnamed protein product [Kluyveromyces lactis]
          Length = 93

 Score = 34.7 bits (78), Expect = 4.5
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           +++ D  P   I++KV   D  S +   + K  PL+ LM+ +    G  +   + F ++G
Sbjct: 6   EQKVDVKPETHINLKVS--DGSSEIFFKIKKTTPLKRLMEAFAKRQG-KEIESLRFLYDG 62

Query: 376 HKLKGKNTAEELGLECDDIIE 396
            ++    T E+L +E +DIIE
Sbjct: 63  VRVLPDQTPEDLDMEDNDIIE 83



>gi|6320718|ref|NP_010798.1| Protein that may be involved in function and/or structure of the
           eukaryotic kinetochore; has similarity to SUMO-1; Smt3p
           [Saccharomyces cerevisiae]
 gi|2501450|sp|Q12306|SMT3_YEAST Ubiquitin-like protein SMT3 precursor
 gi|2133144|pir||S63999 SMT3 protein - yeast (Saccharomyces cerevisiae)
 gi|20151196|pdb|1L2N|A Chain A, Smt3 Solution Structure
 gi|881372|gb|AAB01675.1| Smt3p
 gi|927779|gb|AAB64951.1| suppressor of MIF2 mutations; CAI: 0.31 [Saccharomyces cerevisiae]
 gi|45270238|gb|AAS56500.1| YDR510W [Saccharomyces cerevisiae]
          Length = 101

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 318 QKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEGHK 377
           + +  P   I++KV   D  S +   + K  PL+ LM+ +    G  +   + F ++G +
Sbjct: 15  KPEVKPETHINLKVS--DGSSEIFFKIKKTTPLRRLMEAFAKRQG-KEMDSLRFLYDGIR 71

Query: 378 LKGKNTAEELGLECDDIIE 396
           ++   T E+L +E +DIIE
Sbjct: 72  IQADQTPEDLDMEDNDIIE 90



>gi|15240471|ref|NP_200327.1| small ubiquitin-like modifier 2 (SUMO) [Arabidopsis thaliana]
 gi|9758113|dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana]
 gi|19715611|gb|AAL91628.1| AT5g55160/MCO15_11 [Arabidopsis thaliana]
 gi|21360423|gb|AAM47327.1| AT5g55160/MCO15_11 [Arabidopsis thaliana]
 gi|21537401|gb|AAM61742.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana]
 gi|22652844|gb|AAN03846.1| small ubiquitin-like modifier 2 [Arabidopsis thaliana]
          Length = 103

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           +E K  D    I++KV+G+D  + +   + +   L+ LM+ Y     +   + ++F F+G
Sbjct: 6   EEDKKPDQGAHINLKVKGQDG-NEVFFRIKRSTQLKKLMNAYCDRQSV-DFNSIAFLFDG 63

Query: 376 HKLKGKNTAEELGLECDDIIE 396
            +L+ + T +EL +E  D I+
Sbjct: 64  RRLRAEQTPDELEMEDGDEID 84



>gi|49079730|ref|XP_403478.1| hypothetical protein UM05863.1 [Ustilago maydis 521]
 gi|46101575|gb|EAK86808.1| hypothetical protein UM05863.1 [Ustilago maydis 521]
          Length = 93

 Score = 33.5 bits (75), Expect = 9.7
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           + Q   +  E+++IKV+  D  + +   V +   L  L   Y   MG   ++ V F F+G
Sbjct: 6   NAQPKPEGGEQLNIKVKDADG-NEVFFKVKRTTKLSKLKKAYAERMG-KPENSVRFIFDG 63

Query: 376 HKLKGKNTAEELGLECDDIIE 396
            ++   +TAE LG+E  D I+
Sbjct: 64  QRIGDNDTAETLGMEDQDEID 84



>gi|15236885|ref|NP_194414.1| ubiquitin-like protein (SMT3) [Arabidopsis thaliana]
 gi|21542462|sp|P55852|SMT3_ARATH Ubiquitin-like protein SMT3
 gi|7446817|pir||T04807 SMT3 protein homolog F10M23.180 - Arabidopsis thaliana
 gi|4455207|emb|CAB36530.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|7269536|emb|CAB79539.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|18252867|gb|AAL62360.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|21592529|gb|AAM64478.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|22652842|gb|AAN03845.1| small ubiquitin-like modifier 1 [Arabidopsis thaliana]
 gi|30725548|gb|AAP37796.1| At4g26840 [Arabidopsis thaliana]
          Length = 100

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 316 DEQKDCDPNEKISIKVQGKDKQSHLSVMVGKVEPLQSLMDQYQAAMGLTKKHKVSFYFEG 375
           +++K  D    I++KV+G+D  + +   + +   L+ LM+ Y     +   + ++F F+G
Sbjct: 7   EDKKPGDGGAHINLKVKGQDG-NEVFFRIKRSTQLKKLMNAYCDRQSV-DMNSIAFLFDG 64

Query: 376 HKLKGKNTAEELGLECDDIIE 396
            +L+ + T +EL +E  D I+
Sbjct: 65  RRLRAEQTPDELDMEDGDEID 85






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Jul 13, 2004  2:03 AM
  Number of letters in database: 641,309,329
  Number of sequences in database:  1,922,832
  
Lambda     K      H
   0.313    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,012,683
Number of Sequences: 1922832
Number of extensions: 3694142
Number of successful extensions: 10913
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 10877
Number of HSP's gapped (non-prelim): 50
length of query: 399
length of database: 641,309,329
effective HSP length: 127
effective length of query: 272
effective length of database: 397,109,665
effective search space: 108013828880
effective search space used: 108013828880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)