Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1089738892-15125-199534311069.BLASTQ4 Query= Nc_XP_328663 (550 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 1,922,832 sequences; 641,309,329 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs
RID: 1089738892-15125-199534311069.BLASTQ4
Query= Nc_XP_328663 (550 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 1,922,832 sequences; 641,309,329 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Score E Sequences producing significant alignments: (bits) Value gi|32416370|ref|XP_328663.1| predicted protein [Neurospora ... 781 0.0 gi|38106095|gb|EAA52445.1| hypothetical protein MG05137.4 [... 52 3e-05 gi|49096946|ref|XP_409933.1| hypothetical protein AN5796.2 ... 50 2e-04 gi|46107152|ref|XP_380635.1| hypothetical protein FG00459.1... 43 0.023 gi|9629423|ref|NP_044644.1| subunit of replicative DNA poly... 36 2.6 gi|29247124|gb|EAA38697.1| GLP_516_37620_40541 [Giardia lam... 35 3.2 gi|7511618|pir||T29757 protein UNC-89 - Caenorhabditis elegans 35 3.3 gi|1160355|gb|AAB00542.1| UNC-89 35 3.3 gi|25141314|ref|NP_491290.2| UNCoordinated locomotion UNC-8... 35 3.3 gi|31746683|gb|AAP68958.1| Uncoordinated protein 89, isofor... 35 3.3 gi|49651310|emb|CAG78249.1| unnamed protein product [Yarrow... 35 4.7 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|32416370|ref|XP_328663.1| predicted protein [Neurospora ... 781 0.0 gi|38106095|gb|EAA52445.1| hypothetical protein MG05137.4 [... 52 3e-05 gi|49096946|ref|XP_409933.1| hypothetical protein AN5796.2 ... 50 2e-04 gi|46107152|ref|XP_380635.1| hypothetical protein FG00459.1... 43 0.023 gi|9629423|ref|NP_044644.1| subunit of replicative DNA poly... 36 2.6 gi|29247124|gb|EAA38697.1| GLP_516_37620_40541 [Giardia lam... 35 3.2 gi|7511618|pir||T29757 protein UNC-89 - Caenorhabditis elegans 35 3.3 gi|1160355|gb|AAB00542.1| UNC-89 35 3.3 gi|25141314|ref|NP_491290.2| UNCoordinated locomotion UNC-8... 35 3.3 gi|31746683|gb|AAP68958.1| Uncoordinated protein 89, isofor... 35 3.3 gi|49651310|emb|CAG78249.1| unnamed protein product [Yarrow... 35 4.7
>gi|32416370|ref|XP_328663.1| predicted protein [Neurospora crassa] gi|28923685|gb|EAA32854.1| predicted protein [Neurospora crassa] Length = 550 Score = 781 bits (2017), Expect = 0.0 Identities = 447/550 (81%), Positives = 447/550 (81%) Query: 1 MDTATDVPKKRRALPFKRTVARTPANEPPPSHAPEHNSDQDDPLALFRRSKDVFPMVLED 60 MDTATDVPKKRRALPFKRTVARTPANEPPPSHAPEHNSDQDDPLALFRRSKDVFPMVLED Sbjct: 1 MDTATDVPKKRRALPFKRTVARTPANEPPPSHAPEHNSDQDDPLALFRRSKDVFPMVLED 60 Query: 61 LQRAXXXXXXXXXXXXXXGHVNKKRRVSSNVEGDNEAPLGXXXXXXXXXXXXXXXRVXXX 120 LQRA GHVNKKRRVSSNVEGDNEAPLG RV Sbjct: 61 LQRASSEEKVKPSESPKEGHVNKKRRVSSNVEGDNEAPLGASSSSVSALSRTSASRVDSD 120 Query: 121 XXXLIMDVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLY 180 LIMDVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLY Sbjct: 121 DDDLIMDVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLY 180 Query: 181 SPHSKRRNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLPGASSTSKRKPFQPAALD 240 SPHSKRRNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLPGASSTSKRKPFQPAALD Sbjct: 181 SPHSKRRNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLPGASSTSKRKPFQPAALD 240 Query: 241 SDNDSDLEVSEVRPKKRXXXXXXXXXXXXXXTDPDHEATIVXXXXXXXXXXXXWVTKAAA 300 SDNDSDLEVSEVRPKKR TDPDHEATIV WVTKAAA Sbjct: 241 SDNDSDLEVSEVRPKKRSASFSSSPPPAPSATDPDHEATIVADKADDDDDFAKWVTKAAA 300 Query: 301 LEADQANWTIDVLVTSRMPHTKPLTARRRMKQGLKLILDTWIRQQVLHGCEIPEDMVGKL 360 LEADQANWTIDVLVTSRMPHTKPLTARRRMKQGLKLILDTWIRQQVLHGCEIPEDMVGKL Sbjct: 301 LEADQANWTIDVLVTSRMPHTKPLTARRRMKQGLKLILDTWIRQQVLHGCEIPEDMVGKL 360 Query: 361 FLTFKGNRIYGNSTIASLGVKVDANGVLQLPPGAMTSREAMEGYVIQGGKIGLVLEVWHX 420 FLTFKGNRIYGNSTIASLGVKVDANGVLQLPPGAMTSREAMEGYVIQGGKIGLVLEVWH Sbjct: 361 FLTFKGNRIYGNSTIASLGVKVDANGVLQLPPGAMTSREAMEGYVIQGGKIGLVLEVWHE 420 Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQQSGTGVSGANGWSRGGSEAAEXXXXXXXXXX 480 QQSGTGVSGANGWSRGGSEAAE Sbjct: 421 EFYEEELTKEKRRRERELGLIDDDDDEDQQSGTGVSGANGWSRGGSEAAEVKKTKIKVVL 480 Query: 481 XXXDLQPLKIAVYEDTPVSTMVQVFRKQRDIKPEQTVVIQFDGEELNENMLVGAMDIERD 540 DLQPLKIAVYEDTPVSTMVQVFRKQRDIKPEQTVVIQFDGEELNENMLVGAMDIERD Sbjct: 481 KAKDLQPLKIAVYEDTPVSTMVQVFRKQRDIKPEQTVVIQFDGEELNENMLVGAMDIERD 540 Query: 541 ETNQFEVYIK 550 ETNQFEVYIK Sbjct: 541 ETNQFEVYIK 550
>gi|38106095|gb|EAA52445.1| hypothetical protein MG05137.4 [Magnaporthe grisea 70-15] Length = 511 Score = 52.4 bits (124), Expect = 3e-05 Identities = 60/231 (25%), Positives = 90/231 (38%), Gaps = 13/231 (5%) Query: 310 IDVLVTSRMP--HTKPLTARRRMKQGLKLILDTWIRQQVLHGCEIPEDMVGKLFLTFKGN 367 I V VTSR+P KP+ M++ +K++ DT + G + E+ FL +K + Sbjct: 282 IQVFVTSRLPPPKMKPVVLNTVMRKPIKVLRDTVVAFSASRGRPLTEEEQKGAFLVWKDS 341 Query: 368 RIYGNSTIASLGVKVDANGVLQLPPGAMTSREAMEGYVIQGGKIGLVLEVWHXXXXXXXX 427 R+Y +ST+ SLGV DA+G S A +G + G + Sbjct: 342 RLYSSSTLMSLGVVPDAHGGFS----KTGSGNANDGVTVDGQLHFELFTEEIYAEWMQQL 397 Query: 428 XXXXXXXXXXXXXXXXXXXXXQQSGTGVSGANGWSRGGSEAAEXXXXXXXXXXXXXDLQP 487 + + G A G SE +L Sbjct: 398 EKQRQKDLYQTISDDEGETGQKPAADGQDEAQGQDGKSSEKIR-------IFLKAKNLDQ 450 Query: 488 LKIAVYEDTPVSTMVQVFRKQRDIKPEQTVVIQFDGEELNENMLVGAMDIE 538 +K + DT +S +V FR R I ++ VVI FDG++L E VG IE Sbjct: 451 VKASAKADTEISELVAAFRNVRKIPADKQVVIMFDGDKLAETDTVGDAGIE 501
>gi|49096946|ref|XP_409933.1| hypothetical protein AN5796.2 [Aspergillus nidulans FGSC A4] gi|40743699|gb|EAA62889.1| hypothetical protein AN5796.2 [Aspergillus nidulans FGSC A4] Length = 404 Score = 49.7 bits (117), Expect = 2e-04 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Query: 310 IDVLVTSRMPHTKPLTARRRMKQGLKLILDTWIRQQVLHGCEIPEDMVGKLFLTFKGNRI 369 + +L+TS + +TKPL +R+M Q LK + W +Q ++P+D+ +FLT+KG R+ Sbjct: 200 VHILITSEIANTKPLVIQRKMSQSLKEVRLAWFARQ-----DLPKDLQPTVFLTWKGRRL 254 Query: 370 YGNSTIASLGVKVDAN 385 + +T SL + N Sbjct: 255 FDVTTCKSLNISAYTN 270
>gi|46107152|ref|XP_380635.1| hypothetical protein FG00459.1 [Gibberella zeae PH-1] gi|42545629|gb|EAA68472.1| hypothetical protein FG00459.1 [Gibberella zeae PH-1] Length = 504 Score = 42.7 bits (99), Expect = 0.023 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Query: 310 IDVLVTSRMPHTKPLTARRRMKQGLKLILDTWIRQQVLHGCEIPEDMVGKLFLTFKGNRI 369 I V++TS +P + L A+ + L++ D W++ Q G +I D + LT++ N++ Sbjct: 298 ISVMITSTIPGSGILMAKFLFDKQLRIARDAWVKHQQKKGLDIKPD---DIILTWRRNKL 354 Query: 370 YGNSTIASLGVKVDANGVLQ 389 Y ST+ LG++ NG ++ Sbjct: 355 YNTSTLTGLGIRPSGNGKVE 374
Score = 39.3 bits (90), Expect = 0.26 Identities = 21/64 (32%), Positives = 39/64 (60%) Query: 484 DLQPLKIAVYEDTPVSTMVQVFRKQRDIKPEQTVVIQFDGEELNENMLVGAMDIERDETN 543 D++ L+ V +T V T++ VFRKQR + ++ V + +DG+ L E++ + +IE +T Sbjct: 440 DIEALECKVMPETTVDTLIAVFRKQRQVGSDKEVSLWWDGDRLEEHVEMEQAEIEEHDTI 499 Query: 544 QFEV 547 + V Sbjct: 500 EVHV 503
>gi|9629423|ref|NP_044644.1| subunit of replicative DNA polymerase [Human herpesvirus 1] gi|136905|sp|P10226|VPAP_HHV11 DNA polymerase processivity factor (Polymerase accessory protein) (PAP) (DNA-binding protein UL42) gi|73837|pir||WMBE42 DNA-binding protein - human herpesvirus 1 (strain 17) gi|59542|emb|CAA32305.1| subunit of replicative DNA polymerase [Human herpesvirus 1] gi|330236|gb|AAA45824.1| UL42 [human herpesvirus 1] Length = 488 Score = 35.8 bits (81), Expect = 2.6 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 194 PKPTALGRSTRATQRGRSPLEGV--ETSFNLPGASSTSKRKPFQPAALDSDNDSD 246 P P++ R T T+RGRS E +T+ P S + P P LD+++DSD Sbjct: 381 PMPSSTTRVTPTTKRGRSGGEDARADTALKKPKTGSPTAPPPADPVPLDTEDDSD 435
>gi|29247124|gb|EAA38697.1| GLP_516_37620_40541 [Giardia lamblia ATCC 50803] Length = 973 Score = 35.4 bits (80), Expect = 3.2 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Query: 148 KPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLYSPHS-KRRNPDRFSPKPTALGRSTRAT 206 +P +TT +S + +K + S+ E G ++ +S S +R N D S + ++ R Sbjct: 517 RPSATTDSRSRSGNKAHTSISNKEACQGAEEAHSHISTQRENADNRSNRESSNATRGRRP 576 Query: 207 QRGR-SPLEGVETSFNLPGASSTSKRKP 233 Q R P GVE S LP +S T +++P Sbjct: 577 QSARPKPAVGVEKSVKLPSSSITKEKRP 604
>gi|7511618|pir||T29757 protein UNC-89 - Caenorhabditis elegans Length = 6642 Score = 35.4 bits (80), Expect = 3.3 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 11/134 (8%) Query: 127 DVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLYSPHSKR 186 +VK K+ P+K+ V + P +P K+ K + +D+ SP K Sbjct: 1597 EVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKE 1656 Query: 187 RNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLP----GASSTSKRKPFQPAALDSD 242 ++P++ KPT+ T++ SP + + P + T + KP P + Sbjct: 1657 KSPEKVEEKPTS------PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKS 1710 Query: 243 NDSDLEVSEVRPKK 256 + + V EV+ K Sbjct: 1711 PEKSV-VEEVKSPK 1723
>gi|1160355|gb|AAB00542.1| UNC-89 Length = 6632 Score = 35.4 bits (80), Expect = 3.3 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 11/134 (8%) Query: 127 DVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLYSPHSKR 186 +VK K+ P+K+ V + P +P K+ K + +D+ SP K Sbjct: 1597 EVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKE 1656 Query: 187 RNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLP----GASSTSKRKPFQPAALDSD 242 ++P++ KPT+ T++ SP + + P + T + KP P + Sbjct: 1657 KSPEKVEEKPTS------PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKS 1710 Query: 243 NDSDLEVSEVRPKK 256 + + V EV+ K Sbjct: 1711 PEKSV-VEEVKSPK 1723
>gi|25141314|ref|NP_491290.2| UNCoordinated locomotion UNC-89, PHarynx Muscle abnormal PHM-1, UNC-89 (unc-89) [Caenorhabditis elegans] gi|29428125|sp|O01761|UN89_CAEEL Muscle M-line assembly protein unc-89 (Uncoordinated protein 89) gi|20198774|gb|AAB54132.2| Uncoordinated protein 89, isoform a [Caenorhabditis elegans] Length = 6632 Score = 35.4 bits (80), Expect = 3.3 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 11/134 (8%) Query: 127 DVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLYSPHSKR 186 +VK K+ P+K+ V + P +P K+ K + +D+ SP K Sbjct: 1597 EVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKE 1656 Query: 187 RNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLP----GASSTSKRKPFQPAALDSD 242 ++P++ KPT+ T++ SP + + P + T + KP P + Sbjct: 1657 KSPEKVEEKPTS------PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKS 1710 Query: 243 NDSDLEVSEVRPKK 256 + + V EV+ K Sbjct: 1711 PEKSV-VEEVKSPK 1723
>gi|31746683|gb|AAP68958.1| Uncoordinated protein 89, isoform b [Caenorhabditis elegans] Length = 8081 Score = 35.4 bits (80), Expect = 3.3 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 11/134 (8%) Query: 127 DVKGKGKEIVRPDKARVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLYSPHSKR 186 +VK K+ P+K+ V + P +P K+ K + +D+ SP K Sbjct: 1597 EVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKE 1656 Query: 187 RNPDRFSPKPTALGRSTRATQRGRSPLEGVETSFNLP----GASSTSKRKPFQPAALDSD 242 ++P++ KPT+ T++ SP + + P + T + KP P + Sbjct: 1657 KSPEKVEEKPTS------PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKS 1710 Query: 243 NDSDLEVSEVRPKK 256 + + V EV+ K Sbjct: 1711 PEKSV-VEEVKSPK 1723
>gi|49651310|emb|CAG78249.1| unnamed protein product [Yarrowia lipolytica] Length = 408 Score = 35.0 bits (79), Expect = 4.7 Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 142 RVPTPRKPLSTTPRKSGTPSKKRFAFSDDEDDHGKDDLYSPHSKR 186 R+P P +P S P +P KR D D HG+DDL S +R Sbjct: 4 RLPLPIQPQSINPPPPQSPQAKREDLIDAADHHGRDDLTSLKRRR 48
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jul 13, 2004 2:03 AM Number of letters in database: 641,309,329 Number of sequences in database: 1,922,832 Lambda K H 0.314 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 117,671,660 Number of Sequences: 1922832 Number of extensions: 4478102 Number of successful extensions: 10148 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 10127 Number of HSP's gapped (non-prelim): 38 length of query: 550 length of database: 641,309,329 effective HSP length: 130 effective length of query: 420 effective length of database: 391,341,169 effective search space: 164363290980 effective search space used: 164363290980 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 77 (34.3 bits)