BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cg_CAGL-CDS2988.1 (369 letters) Database: An.fa 9541 sequences; 5,067,689 total letters Searching....................done Score E Sequences producing significant alignments: (bits) Value AN5796.1#hypothetical protein#552501#553853#- 38 0.004 AN3923.1#hypothetical protein#60957#67514#+ 29 1.8 AN2404.1#hypothetical protein#166120#167363#- 28 5.1 AN6912.1#hypothetical protein#12802#13405#- 27 6.7 >AN5796.1#hypothetical protein#552501#553853#- Length = 404 Score = 38.1 bits (87), Expect = 0.004 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 303 GQDNKKVYVNVKPTTTFARMIEYYRTQKQLPRSTQITLALDDEPLDPHATVKSQDIEDED 362 G D+ K+ + + TTT +++I +R + + + LA D + LDP ++++ +I D D Sbjct: 337 GHDDFKIQIPL--TTTISQVIGAFREARSISPGLVVYLAFDGDRLDPQSSLEDNEITDGD 394 Query: 363 MLEV 366 +++V Sbjct: 395 LVDV 398 >AN3923.1#hypothetical protein#60957#67514#+ Length = 2159 Score = 29.3 bits (64), Expect = 1.8 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 9/156 (5%) Query: 106 YEVRTRSGMK-RARTVEDENDL-FFQSIAKRSQSLPVQDGSGAVRQDKVYYVQFISHVDG 163 YEV T + + A +V + + FF + QS VQ VR ++ Y +QF+ + Sbjct: 683 YEVNTTATLSFDAGSVNNRRLIHFFNDLRFLLQSEYVQK---RVRTEEQYVLQFLDLIKL 739 Query: 164 TKGKSVQVKALGSH-PFSKLVAAALSGLMR-AHRLPSVMRPLYQPESVVSYWNRAKVLGF 221 T+G V+A+G H + + S LMR +RL V R ++ + N + + Sbjct: 740 TQGICPNVRAVGEHVEYENDAWISASILMREINRLCIVFRESFKKPELDGGQNLLRAITV 799 Query: 222 MTCDTLRVPQRYGSDYLEIQLVPVKEEAQYLEQEVF 257 T T + G + + +K++ + + F Sbjct: 800 ATIST--IVHSVGCERKRFEQAEIKDDVHFKNLQPF 833 >AN2404.1#hypothetical protein#166120#167363#- Length = 399 Score = 27.7 bits (60), Expect = 5.1 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 156 QFISHVDGTKGKSVQVKALGSH--PFSKLVAAALSGLMRAHRLPS 198 Q I HV TKG + + GSH ++ AA GL+++ LPS Sbjct: 49 QHIPHVGQTKGTAAEQDLYGSHFSGHTQSSTAAALGLLQSAALPS 93 >AN6912.1#hypothetical protein#12802#13405#- Length = 166 Score = 27.3 bits (59), Expect = 6.7 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 108 VRTRSGMKRARTVEDENDLFFQSIAKRSQSLPVQDGSGAVRQDKVYYVQFISHVD-GTKG 166 +R + GM+RA V D +++ KR++++ + + KV + ++ VD G Sbjct: 69 LRQQKGMERAEAVMDRHEIKVAKSTKRAKTVKNRRADWSDLNGKVSKFEALAGVDTGDDD 128 Query: 167 KSVQVKALGSHP 178 V V A S P Sbjct: 129 AMVDVTAASSKP 140 Database: An.fa Posted date: Jul 8, 2004 10:19 PM Number of letters in database: 5,067,689 Number of sequences in database: 9541 Lambda K H 0.315 0.131 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,891,171 Number of Sequences: 9541 Number of extensions: 104029 Number of successful extensions: 267 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 266 Number of HSP's gapped (non-prelim): 4 length of query: 369 length of database: 5,067,689 effective HSP length: 96 effective length of query: 273 effective length of database: 4,151,753 effective search space: 1133428569 effective search space used: 1133428569 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 58 (26.9 bits)