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GPI Anchor Biosynthesis Report: YADC_SCHPO (SMP3 family, Schizosaccharomyces pombe)



Sequence Analysis
Name From To Source/E Description
TM 6 26 toppred2=0.997 Putative
TM 62 82 toppred2=1.166  
TM 86 106 toppred2=1.150  
TM 139 159 toppred2=1.395  
LCR 146 156 SEG 12 2.2 2.5  
TM 168 188 toppred2=1.872  
TM 216 236 toppred2=2.105  
TM 271 291 toppred2=1.317  
TM 296 316 toppred2=1.629  
TM 339 359 toppred2=2.180  
TM 456 476 toppred2=1.256  
Cluster 489 517 SAPS Negative charge cluster


Sequence Information
Protein YADC_SCHPO
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|1351602|gb|Q09837|Hypothetical protein C4G8.12c in chromosome I.
    Protein Sequence 
    MFKNRKYAII YTFLLILRFW FSQGSSYIHP DEHLQSFQIF ANKLFGWKVE LPWEFTTKKP
IRSVVPLNVM LLPIFLLCRC ICKSNCSPYP ILLFTRLYMC LISLLIDLSI WNIVPLNARW
SALLLYSSSF MATTFQTHTF TNSIETIFFF LTILFLSKLN SVPLNKKISY LYTFLLAIVS
VLGFFTRITF LAFVIAPYIY FSVRCFKKNV NNPKDIFLHL CIFVSVSFAT VLACILEDYK
FYGVFVITFW NNLKYNSQIE NLSQHGLHSR LTHFFTNMPL LCGPLIFVPK LWDVRKPATW
LWLLPVFILS LFPHQEPRFL LPAASIFIVN SGCLVRSYWI KFLFVMYAVV LAVFFGIMHQ
NGVIPAVLEV KNIIEQRNVT TMENCNLYFN PEMPTTIYFW KIYSAPTWML ARPKFSQINT
SHLYNYSTKQ MISKFWETYY EEVKVVNLPE ENTTEFQAST LLVCPVAMLQ TSSYLQNLTM
LHYIPYHVDL DDTDELPLAE LIMNHGIGIF TAKEICENNT ITNELPTVLR SVG


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003