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GPI Anchor Biosynthesis Report: NP_566299.1 (PIG-T family, Arabidopsis thaliana)



Sequence Analysis
Name From To Source/E Description
SignalPepide 1 25 SignalP  
LCR 3 13 SEG 12 2.2 2.5  
ASN_GLYCOSYLATION 183 186 PROSITE Pattern PS00001 NLTP
TM 548 568 toppred2=1.815  
LCR 510 526 SEG 12 2.2 2.5  
Cluster 577 604 SAPS Positive charge cluster
LCR 607 630 SEG 12 2.2 2.5  


Sequence Information
Protein NP_566299.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|18397852|gb|NP_566299.1|NP_566299 expressed protein [Arabidopsis thaliana].
    Protein Sequence 
    MASLLRSLIL LLIVQSFLVA IAFGSKEVEE FSEALLLKPL PDRKVLAHFH FENRAPPSNS
HGRHHHLFPK AISQLVQKFR VKEMELSFTQ GRWNHEHWGG FDPLSSMNAK PVGVELWAVF
DVPQSQVDTS WKNLTHALSG LFCASINFLE SSTSYAAPTW GFGPNSDKLR YGSLPREAVC
TENLTPWLKL LPCRDKDGIS ALMNRPSVYR GFYHSQRLHL STVESGQEGL GSGIVLEQTL
TVVLQPETTS VESNMQPSWS LSSLFGRQVV GRCVLAKSSN VYLQLEGLLG YESKNVDTEI
EAHQLWKNAE FELSLKPERV IRESCSFLFI FDIDKSSDSE PFDLGLTWKR PSKWSCQQAP
LHSSRFLMGS GNERGAIAIL LKATESQEKL SGRDLTNGQC TIKANIFQIF PWYIKVYYHT
LQIFVDQQQK TDSEVLKKIN VSPSTDKVSS GMMEMMLELP CEVKSVAISI EYDKGFLHID
EYPPDANQGF DIPSALISFP DHHASLDFQE ELSNSPLLSS LKEKSLVRSY TEVLLVPLTT
PDFSMPYNVI TITCTIFALY FGSLLNVLRR RIGEEERFLK SQAGKKTGGL KQLLSRITAK
IRGRPIEAPS SSEAESSVLS SKLILKIILV AGAAAAWQYF STDE


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 30th January 2003