Sequences with E-value BETTER than threshold (0.002) 773 0.0
585 e-166
564 e-159
509 e-143
489 e-137
367 e-100
356 6e-97
338 2e-91
230 5e-59
186 7e-46
160 4e-38
Sequences with E-value WORSE than threshold ref|NP_540827.1| (NC_003317) RECOMBINATION PROTEIN RECR [Brucell... 33 9.4
Alignments
>ref|NP_501852.1| (NM_069451) T14G10.7.p [Caenorhabditis elegans]
pir||T24913 hypothetical protein T14G10.7 - Caenorhabditis elegans
emb|CAA93093.1| (Z68880) predicted using Genefinder~cDNA EST EMBL:M89453 comes from
this gene~cDNA EST yk111h3.3 comes from this gene~cDNA
EST yk111h3.5 comes from this gene~cDNA EST yk457b10.3
comes from this gene~cDNA EST yk457b10.5 comes from this
gene~cDNA EST yk3>
Length = 544
Score = 773 bits (1976), Expect = 0.0
Identities = 544/544 (100%), Positives = 544/544 (100%)
Query: 1 MPQESSKSFKQKALDFLLGRQTETEEYGEITQSFINYVHSERPYKLAASLSFVILVFFIG 60
MPQESSKSFKQKALDFLLGRQTETEEYGEITQSFINYVHSERPYKLAASLSFVILVFFIG
Sbjct: 1 MPQESSKSFKQKALDFLLGRQTETEEYGEITQSFINYVHSERPYKLAASLSFVILVFFIG 60
Query: 61 MPMWHFTTSTYRSNFPTFPSNQSITVPIRVIFVITSEDLRNDVKTLMNELEVNMTKKEVV 120
MPMWHFTTSTYRSNFPTFPSNQSITVPIRVIFVITSEDLRNDVKTLMNELEVNMTKKEVV
Sbjct: 61 MPMWHFTTSTYRSNFPTFPSNQSITVPIRVIFVITSEDLRNDVKTLMNELEVNMTKKEVV 120
Query: 121 APLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEWTHYSATRIQLGIG 180
APLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEWTHYSATRIQLGIG
Sbjct: 121 APLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEWTHYSATRIQLGIG 180
Query: 181 KWNFIQWPTKSEEKQKASTRVTDLVSETLIDVPHLNSIVRRDLRQKMQPWQIAALPLSHQ 240
KWNFIQWPTKSEEKQKASTRVTDLVSETLIDVPHLNSIVRRDLRQKMQPWQIAALPLSHQ
Sbjct: 181 KWNFIQWPTKSEEKQKASTRVTDLVSETLIDVPHLNSIVRRDLRQKMQPWQIAALPLSHQ 240
Query: 241 KRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSFE 300
KRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSFE
Sbjct: 241 KRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSFE 300
Query: 301 HLWDFEPTRGFLIKDVQERWALTHSAMEELVKKVDSQLQTSLQHGAVLRFVVLETVEPVI 360
HLWDFEPTRGFLIKDVQERWALTHSAMEELVKKVDSQLQTSLQHGAVLRFVVLETVEPVI
Sbjct: 301 HLWDFEPTRGFLIKDVQERWALTHSAMEELVKKVDSQLQTSLQHGAVLRFVVLETVEPVI 360
Query: 361 VLDDTGEDSHGVAVASWGAVLPRNEATESRAIAAIRIQMGMDAELSHGWHRPPVAICQWE 420
VLDDTGEDSHGVAVASWGAVLPRNEATESRAIAAIRIQMGMDAELSHGWHRPPVAICQWE
Sbjct: 361 VLDDTGEDSHGVAVASWGAVLPRNEATESRAIAAIRIQMGMDAELSHGWHRPPVAICQWE 420
Query: 421 VARARLRASVDNAMRAASAVRALDQLAQKISNIVINDDVADRATRAVEILNDVVRPGRML 480
VARARLRASVDNAMRAASAVRALDQLAQKISNIVINDDVADRATRAVEILNDVVRPGRML
Sbjct: 421 VARARLRASVDNAMRAASAVRALDQLAQKISNIVINDDVADRATRAVEILNDVVRPGRML 480
Query: 481 DFERLLEARRLADSANSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLVYEIAKITVF 540
DFERLLEARRLADSANSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLVYEIAKITVF
Sbjct: 481 DFERLLEARRLADSANSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLVYEIAKITVF 540
Query: 541 WGYL 544
WGYL
Sbjct: 541 WGYL 544
>ref|NP_149975.1| (NM_033198) phosphatidylinositol glycan, class S [Homo sapiens]
dbj|BAB60853.1| (AB057723) phosphatidyl inositol glycan class S [Homo sapiens]
Length = 555
Score = 585 bits (1494), Expect = e-166
Identities = 114/535 (21%), Positives = 206/535 (38%), Gaps = 53/535 (9%)
Query: 48 ASLSFVILVFFIGMPMWHFTTSTYRSNFPTFPSNQSITVPIRVIFVITSEDLRNDVKTLM 107
A+L F + +G+P+W TT TYR++ P + + +R++ +T R V L
Sbjct: 19 AALFFAAVAIVLGLPLWWKTTETYRASLPYSQISGLNALQLRLMVPVTVVFTRESVP-LD 77
Query: 108 NELEVNMT---KKEVVAPLDFTWTTQFIG--LRSFEHLEQDHSIQIEENKEFFDVFVALV 162
++ ++ T ++E+ +F R+ +H E+ S + E
Sbjct: 78 DQEKLPFTVVHEREIPLKYKMKIKCRFQKAYRRALDHEEEALSSGSVQEAEAMLDEPQEQ 137
Query: 163 PEKEWT-HYSATRIQLGIGKWNFIQWPTKSEEKQKASTRVT-DLVSETLIDVPHLNSIVR 220
E T + + L P ++ + R +++ ++ V S+
Sbjct: 138 AEGSLTVYVISEHSSLLPQDMMSYIGPKRTAVVRGIMHREAFNIIGRRIVQVAQAMSLTE 197
Query: 221 RDLRQKMQPWQIAALPLSHQKRLVWDSAPLATN--YHIQVIHLHENSEITPESLKEQEKT 278
L + A L K PL ++ Y I L+ + + +
Sbjct: 198 DVLAAAL------ADHLPEDKWSAEKRRPLKSSLGYEITFSLLNPDPKSHDVYWDIEGAV 251
Query: 279 ARALRKFAEKVKEITNVEVSFEHLWDFEPTRGFLIKDVQERWALTHSAMEELVKKVDSQL 338
R ++ F + N V + L+ + L ++ ++ V+S+L
Sbjct: 252 RRYVQPFLNALGAAGNFSVDSQILYYAMLGVNPRFDSASSSYYLDMHSLPHVINPVESRL 311
Query: 339 QTSLQH-GAVLRFVVLET--VEPVIVLDDTGE---DSHGVAVASWGAVLPRN--EATESR 390
+S VL F++ + + D ++ WG ++ N T +
Sbjct: 312 GSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSPRWGGIMVYNVDSKTYNA 371
Query: 391 AIAAIRIQMGM---------DAELSHGWHRPPV------------AICQWEVARARLRAS 429
++ +R+++ M L G +P + + WE+ R S
Sbjct: 372 SVLPVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARS 431
Query: 430 VDNAMRAASAVRALDQLAQKISNIVINDDVAD---RATRAVEILNDVVRPGRMLD-FERL 485
V+N A + + +L QL KISNIVI DDVA +A AV+ + + G + F
Sbjct: 432 VENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVAS 491
Query: 486 LEARRLADSANSDHSLLAMLYFPMDQRTAVLIPLA----VPIVLPICKLVYEIAK 536
EA ++ A D SLL +LYFP DQ+ A+ IPL VPI+L + K+ E K
Sbjct: 492 QEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKIFLETRK 546
>gb|AAL27645.1| (AY061834) SD10476p [Drosophila melanogaster]
Length = 536
Score = 564 bits (1439), Expect = e-159
Identities = 116/543 (21%), Positives = 215/543 (39%), Gaps = 92/543 (16%)
Query: 41 ERPYKLAASLSFVILVFFIGMPMWHFTTSTYRSNFPTFPSNQSITVPIRV---IFVITSE 97
E +++ A+L+F++++ IG+PMW TT+ YR N P+ +PI+ + + T +
Sbjct: 18 EDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQQ 77
Query: 98 DLRNDVKTLMNELEVNMTKKEVVAPLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDV 157
R + L+ EL+ + E+ W+ +F L ++ H+ E
Sbjct: 78 TSRGQL--LIAELQNAFSDNEI-------WSVEFKQLSPTPMTQEAHTPAALEK------ 122
Query: 158 FVALVPEKEWTHYSATRIQLGIGKWNFIQWPTKSEEKQKASTRVTDLVSETLIDVPHLNS 217
L+ E H + +G + FI+WP EE + R + S+T N
Sbjct: 123 ---LLLE---NHVQS------VGDFMFIEWPKLQEELLLTTERSALMRSDTP-----SNK 165
Query: 218 IVRRDLRQKMQPWQIAALPLSHQKRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEK 277
I + + +Q ++I + LS +R+ S Y + V L+ +T
Sbjct: 166 IAQLLHAKILQTYRINQI-LSTDERMGAKSEAPQPAYDVIVSVLNPKPRLTHAKWNIAMA 224
Query: 278 TARALRKFAEKVKEITNVEVSFEHLWDFEPTRGFLIKDVQER------WALTHSAMEELV 331
+ + KV ++N V + W + +K V+++ +AL +A+ L+
Sbjct: 225 VKTYIEPWLAKVSGVSNYTVRSQ--WKYRVAIEADLKQVRDQSKLGRHYALQETALPHLL 282
Query: 332 KKVDSQLQTSLQHGAVLRFVVLET---VEPVIVLDDTGE-----DSHGVAVASWGAVLPR 383
+ L S + VV + P+ + + + D WG +
Sbjct: 283 TSIAQNLSASTTDKPAINLVVYIPPCHIAPLHIYNSKDQRLTRNDVDAFISPPWGGFIIA 342
Query: 384 N--------------------EATES--------RAIAAIRIQMGMDAELSHGWHRPPVA 415
N T++ + I ++ M+ +
Sbjct: 343 NPPEHVCLAAMSDQEAVPYHVSTTDNMQVMLDQLHKLLDISSELQMEGVKVVDIE--QLE 400
Query: 416 ICQWEVARARLRASVDNAMRAASAVRALDQLAQKISNIVINDDVADRATRAVEILNDVVR 475
+WE R+++ + A+S +++L +L +IS IVI+D+V T + D++
Sbjct: 401 PRRWEYEAYLRRSAIRHISTASSTLQSLIKLLDQISYIVIDDEVGAAITNSY---ADILA 457
Query: 476 PGRMLDFERLLEARRLADSA-------NSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPIC 528
L RL +A LA A D SLLA LYFP +Q+ A+ IPL +PI++P+
Sbjct: 458 AKAALLEHRLADASVLAKRAFVASERGFFDASLLAQLYFPDEQKYAIYIPLFLPIMVPVL 517
Query: 529 KLV 531
Sbjct: 518 SSF 520
>ref|NP_010722.1| (NC_001136) Glycosyl Phosphatidyl Inositol 17; Gpi17p
[Saccharomyces cerevisiae]
pir||S69714 hypothetical protein YDR434w - yeast (Saccharomyces cerevisiae)
gb|AAB64866.1| (U33007) Ydr434wp; CAI: 0.14 [Saccharomyces cerevisiae]
Length = 534
Score = 509 bits (1297), Expect = e-143
Identities = 75/528 (14%), Positives = 171/528 (32%), Gaps = 87/528 (16%)
Query: 52 FVILVFFIGMPMWHFTTSTYRSNFP--TFPSNQSITVP-IRVIFVITSEDLRNDVKTLMN 108
FV + F+G+P+W+ T+ YR++ P S Q+ I ++ + + + +
Sbjct: 14 FVAIYLFLGVPLWYKLTTVYRASLPINYIESLQNNKFQDIHLVIPVYVKSDTYRFPDVHD 73
Query: 109 ELEVNMTKKEVVAPLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEWT 168
++V + + ++ + + + + E
Sbjct: 74 AIQV--------------------QVNHLLNSQEQRVPWSLQVLPYNETIEQMESEGNQF 113
Query: 169 HYSATRIQLGIGKWNFIQWPTKSEEKQKASTRVTDLVSETLIDVPHLNSIVRRDLRQKMQ 228
H ++ IG + ++E L ++ V ++V
Sbjct: 114 HVVTLKLDEFIGYSSAYD----TKETLVYYDDAAVLSNDLPFFVAQ--TLVE-------H 160
Query: 229 PWQIAALPLSHQKRLVWDSAPLATNY----HIQVIHLHENSEITPESLKEQEKTARALRK 284
+Q+ L+ V + +A +Y H+ V L + P + + +
Sbjct: 161 TFQLEWTHLNKTCEGVSTNNDVAISYDPNIHLSVTLLSGDGN--PVAWEIEPTLTDYFSP 218
Query: 285 FAEKVKEITNVEVSFEHLWDFEPTRGFLIKDVQER--WALTHS-AMEELVKKVDSQLQTS 341
F + + + N V ++ + L + L+H+ + EL +S
Sbjct: 219 FRKFLSPLVNFTVDSSIVYHNDLNLHSLNGSCTSVTWFDLSHTIDLSEL---------SS 269
Query: 342 LQHGA---VLRFVVLETVEP-----VIVLDDT---GE----DSHGVAVASWGAVLPR--- 383
+ + L ++ + ++ T E D + V WG ++
Sbjct: 270 MAYYPEDSALNLAIVFPSASSSPDGLAFINGTRISDEITTLDWNSYLVPQWGVIIINKMP 329
Query: 384 ---NEATESRAIAAIRIQMGMDAELSHGWHRPPVAICQ--WEVARARLRASVDNAMRAAS 438
N + + + D G + + + + N +A
Sbjct: 330 LKPNSVISEDYLEPMMYRFATDIFQLLGLTEGSQDLLSPYITIDSFKRLTILQNLDKATE 389
Query: 439 AVRALDQLAQKISNIVINDDVADRATRAVEILNDV----VRPGRMLD------FERLLEA 488
+ +L +L Q+ + I +V+D A+++ + PG+ D E
Sbjct: 390 TLWSLVKLTQQFQGMSIPREVSDNVIEALDLRLQIIDLLNDPGKGGDIVWNNALHLSNEL 449
Query: 489 RRLADSANSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLVYEIAK 536
+L + A + ++ +FP + AV +PL PI + Y + K
Sbjct: 450 VKLCEKAFFNGEMVQQNFFPQEHMIAVYLPLLGPISAVMFFGFYNVMK 497
>sp|Q10351|YDA9_SCHPO HYPOTHETICAL 63.9 KD PROTEIN C1F12.09 IN CHROMOSOME I
pir||S67452 hypothetical protein SPAC1F12.09 - fission yeast
(Schizosaccharomyces pombe)
pir||T38067 hypothetical protein SPAC1F12.09 - fission yeast
(Schizosaccharomyces pombe)
emb|CAA93813.1| (Z69944) hypothetical protein [Schizosaccharomyces pombe]
Length = 554
Score = 489 bits (1248), Expect = e-137
Identities = 64/461 (13%), Positives = 151/461 (31%), Gaps = 50/461 (10%)
Query: 119 VVAPLDFTWTTQFIGLRSFEHLEQDHSIQIEE--------------NKEFFDVFVALVPE 164
++ + W T S + +++ + V V E
Sbjct: 83 ILLAIPVWWKTTHYERSSLPFEDMENAPSTVQTHLRFSPTFRILDDKGNNLTKEVQKVLE 142
Query: 165 KEWTHYSATRIQLGIGKWNFIQWPTKSEEKQKASTRVTDLVSETLIDVPH------LNSI 218
E Y + +++ + + + + + +T P +N +
Sbjct: 143 AEPQIY-SYNLKVLEDDPVDYRIVLRESTDLQWFWDENNFIIDTPSKGPSELAILIVNCL 201
Query: 219 VRRDLRQKMQPWQIAALPLSHQKRL-VWDSAPLA--TNYHIQVIHLHENSEITPESLKEQ 275
Q M+ W S + + Y + + L P + +
Sbjct: 202 WEAFSPQVMEVWSKFTRFSSTVEPSRAETKRTVQFSPQYRVLLSLLVGEGNHEPINWDIE 261
Query: 276 EKTARALRKFAEKVKEITNVEVSFEHLWDFEPTRGFLIKDVQERWALTHSAMEELVKKVD 335
+ E++ + + + + + E IKD +++ H+ + LV +
Sbjct: 262 NAIQKYFNPLIEQLASLAKLNIETQIQYFVEDA-EAYIKD--DKFCTKHADLPNLVNNFE 318
Query: 336 SQLQTSLQ-HGAVLRFVVLETVEPVIVLDDTGEDSHGVAV-----ASWGAVLPRN-EATE 388
L S + FV+ + L EDS+ + WG++ N TE
Sbjct: 319 KYLSFSPHIREPTIHFVLYVPSPQIQPLWLENEDSNIIPTNSMLLPQWGSITTINFNVTE 378
Query: 389 SRAIAAIRIQ-----MGMDAELSHGWHRPPVAICQWEV-ARARLRASVDNAMRAASAVRA 442
+ + + ++ + D L G + PV+ + R + ++ + A+ ++
Sbjct: 379 KKLLHDVDLKDYFRVISRDLLLLLGINDVPVSSLSATLADRLLRQRIAESCIEASDTLQN 438
Query: 443 LDQLAQKISNIVINDDVADRATRAVEILNDVVRPGRMLDFERLLEARRLADSAN------ 496
L +L + ++ + ++ + L+ + L L EA +++A
Sbjct: 439 LAKLVHSMQSMAVPKEIQMYVKDTLLSLD---MAYKALSQNNLNEALSYSNNAFSKSQEA 495
Query: 497 -SDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLVYEIAK 536
S++ +YFP + + + PL PI++P+ + K
Sbjct: 496 LFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISFIKEVK 536
Score = 38.9 bits (90), Expect = 0.21
Identities = 19/65 (29%), Positives = 30/65 (45%), Gaps = 2/65 (3%)
Query: 29 EITQSFINYVHSERPYKLAASLSFVILVFFIGMPMWHFTTSTYRSNFPTFPS-NQSITVP 87
E+ +S E+ K A LSF +++ + +P+W TT RS+ P N TV
Sbjct: 56 EVERSNFQLNKPEKSLKRYALLSFYVIIL-LAIPVWWKTTHYERSSLPFEDMENAPSTVQ 114
Query: 88 IRVIF 92
+ F
Sbjct: 115 THLRF 119
>gb|AAL32707.1| (AY062629) Unknown protein [Arabidopsis thaliana]
Length = 599
Score = 367 bits (933), Expect = e-100
Identities = 49/321 (15%), Positives = 101/321 (31%), Gaps = 40/321 (12%)
Query: 256 IQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSFEHLWDFEPTRGFLIKD 315
+ L+ N Q L + + I N+ V + L+ +
Sbjct: 260 LSFSLLNSNPRDWVYDWDFQRIDEALLAPVTKALAPIANITVESQVLYHTPKSSFSSWDK 319
Query: 316 VQERWALTHSAMEELVKKVDSQLQTSL---QHGAVLRFVVLETVEPVIVL-----DDTGE 367
+ + S + V + L TS +L+FVV L +
Sbjct: 320 KLQSYIFRTSDLPFFVNSNEWHLDTSAGASGRSKILQFVVYIPSGKECPLLLQLPNVEIS 379
Query: 368 DSHGVAVASWGAVLPRNEAT-ESRAIAAIRIQMGM------------DAELSHG------ 408
++G WG V+ N + + + R + + G
Sbjct: 380 KTNGFISPMWGGVIVWNPGNCDKDSESPSRNTISLQDLEQIVEIFLGQFRQLFGFKSEAK 439
Query: 409 ---------WHRPPVAICQWEVARARLRASVDNAMRAASAVRALDQLAQKISNIVINDDV 459
+WE+ + + N ++ + +L +L + + ++I D++
Sbjct: 440 YTTGLGTYKILTSERGFTEWELDVLSRKHTCFNLHSCSTTLGSLSRLVRSLPRMIIKDEI 499
Query: 460 ADRATRAV--EILNDVVRP--GRMLDFERLLEARRLADSANSDHSLLAMLYFPMDQRTAV 515
++ ++ L G EAR LA++A S++++ YF + AV
Sbjct: 500 GEQVKYSLKAAKLAQSNASLGGYSSSASSSREARSLAENAFFHPSIMSVSYFSYEHCFAV 559
Query: 516 LIPLAVPIVLPICKLVYEIAK 536
P +P+V + K
Sbjct: 560 YSPFFLPVVGHVVLAAVREWK 580
>gb|AAF56365.1| (AE003749) CG13644 gene product [Drosophila melanogaster]
Length = 347
Score = 356 bits (905), Expect = 6e-97
Identities = 68/338 (20%), Positives = 125/338 (36%), Gaps = 56/338 (16%)
Query: 243 LVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSFEHL 302
+ S Y + V L+ +T + + KV ++N V +
Sbjct: 1 MGAKSEAPQPAYDVIVSVLNPKPRLTHAKWNIAMAVKTYIEPWLAKVSGVSNYTVRSQ-- 58
Query: 303 WDFEPTRGFLIKDVQER------WALTHSAMEELVKKVDSQLQTSLQHGAVLRFVVLET- 355
W + +K V+++ +AL +A+ L+ + L S + VV
Sbjct: 59 WKYRVAIEADLKQVRDQSKLGRHYALQETALPHLLTSIAQNLSASTTDKPAINLVVYIPP 118
Query: 356 --VEPVIVLDDTGE-----DSHGVAVASWGAVLPRN--------------------EATE 388
+ P+ + + + D WG + N T+
Sbjct: 119 CHIAPLHIYNSKDQRLTRNDVDAFISPPWGGFIIANPPEHVCLAAMSDQEAVPYHVSTTD 178
Query: 389 S--------RAIAAIRIQMGMDAELSHGWHRPPVAICQWEVARARLRASVDNAMRAASAV 440
+ + I ++ M+ + +WE R+++ + A+S +
Sbjct: 179 NMQVMLDQLHKLLDISSELQMEGVKVVDIE--QLEPRRWEYEAYLRRSAIRHISTASSTL 236
Query: 441 RALDQLAQKISNIVINDDVADRATRAVEILNDVVRPGRMLDFERLLEARRLADSA----- 495
++L +L +IS IVI+D+V T + D++ L RL +A LA A
Sbjct: 237 QSLIKLLDQISYIVIDDEVGAAITNSY---ADILAAKAALLEHRLADASVLAKRAFVASE 293
Query: 496 --NSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLV 531
D SLLA LYFP +Q+ A+ IPL +PI++P+
Sbjct: 294 RGFFDASLLAQLYFPDEQKYAIYIPLFLPIMVPVLSSF 331
>ref|NP_187374.1| (NM_111598) unknown protein [Arabidopsis thaliana]
gb|AAF20228.1|AC012395_15 (AC012395) unknown protein [Arabidopsis thaliana]
Length = 605
Score = 338 bits (859), Expect = 2e-91
Identities = 45/302 (14%), Positives = 94/302 (30%), Gaps = 40/302 (13%)
Query: 256 IQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSFEHLWDFEPTRGFLIKD 315
+ L+ N Q L + + I N+ V + L+ +
Sbjct: 283 LSFSLLNSNPRDWVYDWDFQRIDEALLAPVTKALAPIANITVESQVLYHTPKSSFSSWDK 342
Query: 316 VQERWALTHSAMEELVKKVDSQLQTSL---QHGAVLRFVVLETVEPVIVL-----DDTGE 367
+ + S + V + L TS +L+FVV L +
Sbjct: 343 KLQSYIFRTSDLPFFVNSNEWHLDTSAGASGRSKILQFVVYIPSGKECPLLLQLPNVEIS 402
Query: 368 DSHGVAVASWGAVLPRNEAT-ESRAIAAIRIQMGM------------DAELSHG------ 408
++G WG V+ N + + + R + + G
Sbjct: 403 KTNGFISPMWGGVIVWNPGNCDKDSESPSRNTISLQDLEQIVEIFLGQFRQLFGFKSEAK 462
Query: 409 ---------WHRPPVAICQWEVARARLRASVDNAMRAASAVRALDQLAQKISNIVINDDV 459
+WE+ + + N ++ + +L +L + + ++I D++
Sbjct: 463 YTTGLGTYKILTSERGFTEWELDVLSRKHTCFNLHSCSTTLGSLSRLVRSLPRMIIKDEI 522
Query: 460 ADRATRAV--EILNDVVRP--GRMLDFERLLEARRLADSANSDHSLLAMLYFPMDQRTAV 515
++ ++ L G EAR LA++A S++++ YF + AV
Sbjct: 523 GEQVKYSLKAAKLAQSNASLGGYSSSASSSREARSLAENAFFHPSIMSVSYFSYEHCFAV 582
Query: 516 LI 517
Sbjct: 583 YS 584
>ref|XP_091596.1| (XM_091596) similar to phosphatidylinositol glycan, class S (H.
sapiens) [Homo sapiens]
Length = 204
Score = 230 bits (582), Expect = 5e-59
Identities = 27/186 (14%), Positives = 54/186 (28%), Gaps = 12/186 (6%)
Query: 122 PLDFTWTTQFIG--LRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEWT-HYSATRIQLG 178
P +F R+ +H E+ S + E E T + + L
Sbjct: 20 PNKMKIKCRFQKAYRRALDHEEEALSSGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSLL 79
Query: 179 IGKWNFIQWPTKSEEKQKASTRVT-DLVSETLIDVPHLNSIVRRDLRQKMQPWQIAALPL 237
P ++ + R +++ ++ V S+ L + A L
Sbjct: 80 PQDMMSYIGPKRTAVVRGIMHREAFNIIGRRIVQVAQAMSLTEDVLAAAL------ADHL 133
Query: 238 SHQKRLVWDSAPLATN--YHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNV 295
K PL ++ Y I L+ + + + R ++ F + N
Sbjct: 134 PEDKWSAEKRRPLKSSLGYEITFSLLNPDPKSHDVYWDIEGAVRRYVQPFLNALGAAGNF 193
Query: 296 EVSFEH 301
V +
Sbjct: 194 SVDSQV 199
>gb|AAF56366.1| (AE003749) CG6031 gene product [Drosophila melanogaster]
Length = 164
Score = 186 bits (470), Expect = 7e-46
Identities = 41/171 (23%), Positives = 76/171 (43%), Gaps = 30/171 (17%)
Query: 41 ERPYKLAASLSFVILVFFIGMPMWHFTTSTYRSNFPTFPSNQSITVPIRV---IFVITSE 97
E +++ A+L+F++++ IG+PMW TT+ YR N P+ +PI+ + + T +
Sbjct: 18 EDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQQ 77
Query: 98 DLRNDVKTLMNELEVNMTKKEVVAPLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDV 157
R + L+ EL+ + E+ W+ +F L ++ H+ E
Sbjct: 78 TSRGQL--LIAELQNAFSDNEI-------WSVEFKQLSPTPMTQEAHTPAALEK------ 122
Query: 158 FVALVPEKEWTHYSATRIQLGIGKWNFIQWPTKSEEKQKASTRVTDLVSET 208
L+ E H + +G + FI+WP EE + R + S+T
Sbjct: 123 ---LLLE---NHVQS------VGDFMFIEWPKLQEELLLTTERSALMRSDT 161
>dbj|BAB70938.1| (AK055512) unnamed protein product [Homo sapiens]
Length = 184
Score = 160 bits (403), Expect = 4e-38
Identities = 54/172 (31%), Positives = 78/172 (44%), Gaps = 29/172 (16%)
Query: 394 AIRIQMGM---------DAELSHGWHRPPV------------AICQWEVARARLRASVDN 432
+R+++ M L G +P + + WE+ R SV+N
Sbjct: 4 PVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVEN 63
Query: 433 AMRAASAVRALDQLAQKISNIVINDDVAD---RATRAVEILNDVVRPGRMLD-FERLLEA 488
A + + +L QL KISNIVI DDVA +A AV+ + + G + F E
Sbjct: 64 LATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEV 123
Query: 489 RRLADSANSDHSLLAMLYFPMDQRTAVLIPLA----VPIVLPICKLVYEIAK 536
++ A D SLL +LYFP DQ+ + IPL VPI+L + KL E K
Sbjct: 124 VTSSELAFFDPSLLHLLYFPDDQKFPIYIPLFLPMAVPILLSLVKLFLETRK 175
>ref|NP_540827.1| (NC_003317) RECOMBINATION PROTEIN RECR [Brucella melitensis]
gb|AAL53091.1| (AE009624) RECOMBINATION PROTEIN RECR [Brucella melitensis]
Length = 224
Score = 33.4 bits (76), Expect = 9.4
Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 7/90 (7%)
Query: 240 QKRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEITNVEVSF 299
+ + + YH+ L I P+ L + R ++V N V
Sbjct: 116 DLWALERADTMNVRYHVLGGRLSPLDGIGPDDLNIKGLVERVASGAIKEVILAVNATVEG 175
Query: 300 EHLWDFEPTRGFLIKDVQERWALTHSAMEE 329
+ + I D + + + +
Sbjct: 176 QTTAHY-------ITDQLSNFDVRVTRLAH 198
CPU time: 101.90 user secs. 2.21 sys. secs 104.11 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.312 0.166 0.450
Gapped
Lambda K H
0.270 0.0583 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 268430665
Number of Sequences: 887402
Number of extensions: 10658701
Number of successful extensions: 38060
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 37963
Number of HSP's gapped (non-prelim): 26
length of query: 544
length of database: 277,845,442
effective HSP length: 59
effective length of query: 485
effective length of database: 225,488,724
effective search space: 109362031140
effective search space used: 109362031140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.1 bits)
S2: 76 (33.7 bits)
