Sequences with E-value BETTER than threshold (0.002) 828 0.0
578 e-164
565 e-160
554 e-156
484 e-135
441 e-122
401 e-110
378 e-103
199 1e-49
195 1e-48
156 9e-37
Sequences with E-value WORSE than threshold ref|NP_126656.1| (NC_000868) SIMILAR TO SEVERAL DNA HELICASES [P... 36 1.9
Alignments
>sp|Q10351|YDA9_SCHPO HYPOTHETICAL 63.9 KD PROTEIN C1F12.09 IN CHROMOSOME I
pir||S67452 hypothetical protein SPAC1F12.09 - fission yeast
(Schizosaccharomyces pombe)
pir||T38067 hypothetical protein SPAC1F12.09 - fission yeast
(Schizosaccharomyces pombe)
emb|CAA93813.1| (Z69944) hypothetical protein [Schizosaccharomyces pombe]
Length = 554
Score = 828 bits (2116), Expect = 0.0
Identities = 554/554 (100%), Positives = 554/554 (100%)
Query: 1 MSPCKWLTMFLKGCWGKIANMNHLDSCFPLRYIIGRKKASKLLCTMDSGLKSDSHEVERS 60
MSPCKWLTMFLKGCWGKIANMNHLDSCFPLRYIIGRKKASKLLCTMDSGLKSDSHEVERS
Sbjct: 1 MSPCKWLTMFLKGCWGKIANMNHLDSCFPLRYIIGRKKASKLLCTMDSGLKSDSHEVERS 60
Query: 61 NFQLNKPEKSLKRYALLSFYVIILLAIPVWWKTTHYERSSLPFEDMENAPSTVQTHLRFS 120
NFQLNKPEKSLKRYALLSFYVIILLAIPVWWKTTHYERSSLPFEDMENAPSTVQTHLRFS
Sbjct: 61 NFQLNKPEKSLKRYALLSFYVIILLAIPVWWKTTHYERSSLPFEDMENAPSTVQTHLRFS 120
Query: 121 PTFRILDDKGNNLTKEVQKVLEAEPQIYSYNLKVLEDDPVDYRIVLRESTDLQWFWDENN 180
PTFRILDDKGNNLTKEVQKVLEAEPQIYSYNLKVLEDDPVDYRIVLRESTDLQWFWDENN
Sbjct: 121 PTFRILDDKGNNLTKEVQKVLEAEPQIYSYNLKVLEDDPVDYRIVLRESTDLQWFWDENN 180
Query: 181 FIIDTPSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVEPSRAETKRTVQFSPQY 240
FIIDTPSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVEPSRAETKRTVQFSPQY
Sbjct: 181 FIIDTPSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVEPSRAETKRTVQFSPQY 240
Query: 241 RVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIETQIQYFVEDAEAYIKD 300
RVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIETQIQYFVEDAEAYIKD
Sbjct: 241 RVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIETQIQYFVEDAEAYIKD 300
Query: 301 DKFCTKHADLPNLVNNFEKYLSFSPHIREPTIHFVLYVPSPQIQPLWLENEDSNIIPTNS 360
DKFCTKHADLPNLVNNFEKYLSFSPHIREPTIHFVLYVPSPQIQPLWLENEDSNIIPTNS
Sbjct: 301 DKFCTKHADLPNLVNNFEKYLSFSPHIREPTIHFVLYVPSPQIQPLWLENEDSNIIPTNS 360
Query: 361 MLLPQWGSITTINFNVTEKKLLHDVDLKDYFRVISRDLLLLLGINDVPVSSLSATLADRL 420
MLLPQWGSITTINFNVTEKKLLHDVDLKDYFRVISRDLLLLLGINDVPVSSLSATLADRL
Sbjct: 361 MLLPQWGSITTINFNVTEKKLLHDVDLKDYFRVISRDLLLLLGINDVPVSSLSATLADRL 420
Query: 421 LRQRIAESCIEASDTLQNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNE 480
LRQRIAESCIEASDTLQNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNE
Sbjct: 421 LRQRIAESCIEASDTLQNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNE 480
Query: 481 ALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISFIKEVKDMLR 540
ALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISFIKEVKDMLR
Sbjct: 481 ALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISFIKEVKDMLR 540
Query: 541 ERKLHRVANVPKPN 554
ERKLHRVANVPKPN
Sbjct: 541 ERKLHRVANVPKPN 554
>gb|AAL27645.1| (AY061834) SD10476p [Drosophila melanogaster]
Length = 536
Score = 578 bits (1476), Expect = e-164
Identities = 119/517 (23%), Positives = 221/517 (42%), Gaps = 61/517 (11%)
Query: 65 NKPEKSLKRYALLSFYVIIL-LAIPVWWKTTHYERSSLPFEDMENA-----PSTVQTHLR 118
+K E + A L+F V+I+ + +P+WW+TT R +LP ++ + + VQ +
Sbjct: 15 DKDEDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIY 74
Query: 119 FSPTFR---ILDDKGNNLT---------KEVQKVLEAEPQIYSYNL-KVLEDDPVDYRIV 165
T R ++ + N + K++ + L K+L ++ V
Sbjct: 75 TQQTSRGQLLIAELQNAFSDNEIWSVEFKQLSPTPMTQEAHTPAALEKLLLENHVQ---S 131
Query: 166 LRESTDLQWFWDENNFIIDT--PSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTV 223
+ + ++W + ++ T + S+ + L A Q + + ST
Sbjct: 132 VGDFMFIEWPKLQEELLLTTERSALMRSDTPSNKIAQLLHAKILQTYRI----NQILSTD 187
Query: 224 EPSRAETKRTVQFSPQYRVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNI 283
E A+++ P Y V++S+L + W+I A++ Y P + +++ ++ +
Sbjct: 188 ERMGAKSEAP---QPAYDVIVSVLNPKPRLTHAKWNIAMAVKTYIEPWLAKVSGVSNYTV 244
Query: 284 ETQIQYFV--EDAEAYIKDDKFCTKH-----ADLPNLVNNFEKYLSFSPHIREPTIHFVL 336
+Q +Y V E ++D +H LP+L+ + + LS S +P I+ V+
Sbjct: 245 RSQWKYRVAIEADLKQVRDQSKLGRHYALQETALPHLLTSIAQNLSAST-TDKPAINLVV 303
Query: 337 YVPSPQIQPLWLENEDSNIIPTN---SMLLPQWGSITTIN--------FNVTEKKLLHDV 385
Y+P I PL + N + N + + P WG N ++ + + V
Sbjct: 304 YIPPCHIAPLHIYNSKDQRLTRNDVDAFISPPWGGFIIANPPEHVCLAAMSDQEAVPYHV 363
Query: 386 DLKDYFRVISRDLLLLL---------GINDVPVSSLSATL--ADRLLRQRIAESCIEASD 434
D +V+ L LL G+ V + L + LR+ AS
Sbjct: 364 STTDNMQVMLDQLHKLLDISSELQMEGVKVVDIEQLEPRRWEYEAYLRRSAIRHISTASS 423
Query: 435 TLQNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNEALSYSNNAFSKSQE 494
TLQ+L KL+ + + + E+ + ++ + A AL ++ L +A + AF S+
Sbjct: 424 TLQSLIKLLDQISYIVIDDEVGAAITNSYADILAAKAALLEHRLADASVLAKRAFVASER 483
Query: 495 ALFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISF 531
F S++ +YFPDE KY IY PLF PI++P+L SF
Sbjct: 484 GFFDASLLAQLYFPDEQKYAIYIPLFLPIMVPVLSSF 520
>ref|NP_010722.1| (NC_001136) Glycosyl Phosphatidyl Inositol 17; Gpi17p
[Saccharomyces cerevisiae]
pir||S69714 hypothetical protein YDR434w - yeast (Saccharomyces cerevisiae)
gb|AAB64866.1| (U33007) Ydr434wp; CAI: 0.14 [Saccharomyces cerevisiae]
Length = 534
Score = 565 bits (1441), Expect = e-160
Identities = 112/513 (21%), Positives = 214/513 (40%), Gaps = 52/513 (10%)
Query: 70 SLKRYALLSFYVII-LLAIPVWWKTTHYERSSLPFEDMENAPST--VQTHLRF-----SP 121
+L+++ F I L +P+W+K T R+SLP +E+ + HL S
Sbjct: 5 NLRKWVGFCFVAIYLFLGVPLWYKLTTVYRASLPINYIESLQNNKFQDIHLVIPVYVKSD 64
Query: 122 TFRILDDKGNNLTKEVQKVLEAEPQIYSYNLKVL---------EDDPVDYRIV---LRES 169
T+R D + + +V +L ++ Q ++L+VL E + + +V L E
Sbjct: 65 TYR-FPDVHDAIQVQVNHLLNSQEQRVPWSLQVLPYNETIEQMESEGNQFHVVTLKLDEF 123
Query: 170 TDLQWFWDENNFII--DTPSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVEPSR 227
+D ++ D + ++L + L E ++T + T E
Sbjct: 124 IGYSSAYDTKETLVYYDDAAVLSNDLPFFVAQTLVE------HTFQLEWTHLNKTCEGVS 177
Query: 228 AETKRTVQFSPQYRVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIETQI 287
+ + P + ++LL G+GN P+ W+IE + YF+P + L+ L +++ I
Sbjct: 178 TNNDVAISYDPNIHLSVTLLSGDGN--PVAWEIEPTLTDYFSPFRKFLSPLVNFTVDSSI 235
Query: 288 QYFVEDAEAYIKDDKFCTKHADLPNLVNNFEKYLSFSPHIREPTIHFVLYVPSPQIQPLW 347
Y + + DL + + + + S + + + ++ + PS P
Sbjct: 236 VYHNDLNLHSLNGSCTSVTWFDLSHTI-DLSELSSMAYYPEDSALNLAIVFPSASSSPDG 294
Query: 348 LE-------NEDSNIIPTNSMLLPQWGSITTINFNVTEKKLLHDVDLKDYFRVISRDLLL 400
L +++ + NS L+PQWG I + ++ + L+ + D+
Sbjct: 295 LAFINGTRISDEITTLDWNSYLVPQWGVIIINKMPLKPNSVISEDYLEPMMYRFATDIFQ 354
Query: 401 LLGINDVPVSSLSATL-ADRLLRQRIAESCIEASDTLQNLAKLVHSMQSMAVPKEIQMYV 459
LLG+ + LS + D R I ++ +A++TL +L KL Q M++P+E+
Sbjct: 355 LLGLTEGSQDLLSPYITIDSFKRLTILQNLDKATETLWSLVKLTQQFQGMSIPREVSD-- 412
Query: 460 KDTLLSLDMAYKALSQNN---------LNEALSYSNNAFSKSQEALFHPSMVTTIYFPDE 510
+ + +LD+ + + N N AL SN ++A F+ MV +FP E
Sbjct: 413 -NVIEALDLRLQIIDLLNDPGKGGDIVWNNALHLSNELVKLCEKAFFNGEMVQQNFFPQE 471
Query: 511 SKYGIYAPLFAPILIPLLISFIKEVKDMLRERK 543
+Y PL PI + F +K+ ++ K
Sbjct: 472 HMIAVYLPLLGPISAVMFFGFYNVMKEKNQKSK 504
>ref|NP_149975.1| (NM_033198) phosphatidylinositol glycan, class S [Homo sapiens]
dbj|BAB60853.1| (AB057723) phosphatidyl inositol glycan class S [Homo sapiens]
Length = 555
Score = 554 bits (1414), Expect = e-156
Identities = 131/529 (24%), Positives = 222/529 (41%), Gaps = 73/529 (13%)
Query: 72 KRYALLSFYVIILLAIPVWWKTTHYERSSL----------------------------PF 103
KR AL V I+L +P+WWKTT R+SL P
Sbjct: 17 KRAALFFAAVAIVLGLPLWWKTTETYRASLPYSQISGLNALQLRLMVPVTVVFTRESVPL 76
Query: 104 EDMENAPSTVQTHLRFSP---TFRILDDKGNNLTKEVQKVLEAEPQIYSYNLK----VLE 156
+D E P TV H R P +I + + E + S +++ +L+
Sbjct: 77 DDQEKLPFTV-VHEREIPLKYKMKIKCRFQKAYRRALDH---EEEALSSGSVQEAEAMLD 132
Query: 157 DDPVDYRIVLRESTDLQWFWDENNFIIDTPSKGPSELAILIVNCLWEAFSPQVMEVWSKF 216
+ L + ++ GP A++ EAF+ +
Sbjct: 133 EPQEQAEGSLTVYVISEHSSLLPQDMM--SYIGPKRTAVVRGIMHREAFNIIGRRIVQVA 190
Query: 217 TRFSSTVEPS-------------RAETKRTVQFSPQYRVLLSLLVGEGNHEPINWDIENA 263
S T + AE +R ++ S Y + SLL + + WDIE A
Sbjct: 191 QAMSLTEDVLAAALADHLPEDKWSAEKRRPLKSSLGYEITFSLLNPDPKSHDVYWDIEGA 250
Query: 264 IQKYFNPLIEQLASLAKLNIETQIQYFVEDAEAYIKDDKFCTKHAD---LPNLVNNFEKY 320
+++Y P + L + ++++QI Y+ D + + D LP+++N E
Sbjct: 251 VRRYVQPFLNALGAAGNFSVDSQILYYAMLGVNPRFDSASSSYYLDMHSLPHVINPVESR 310
Query: 321 LSFSPHIREPTIHFVLYVPSPQIQPLWLENEDSNIIPTNSMLLPQWGSITTIN-----FN 375
L S P ++F+LYVP PL+++++D + TN+ P+WG I N +N
Sbjct: 311 LGSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSPRWGGIMVYNVDSKTYN 370
Query: 376 VTEKKLLHDVDLKDYFRVISRDLLLLLGIND---VPVSSLSATLA--------DRLLRQR 424
+ + +VD+ V L LL GI P LS + DRLL R
Sbjct: 371 ASVLPVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWAR 430
Query: 425 IAESCIEASDTLQNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNEALSY 484
E+ A+ TL +LA+L+ + ++ + ++ V + ++ + + L+ +L A
Sbjct: 431 SVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVA 490
Query: 485 SNNAFSKSQEALFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISFIK 533
S A + S+ A F PS++ +YFPD+ K+ IY PLF P+ +P+L+S +K
Sbjct: 491 SQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVK 539
>gb|AAL32707.1| (AY062629) Unknown protein [Arabidopsis thaliana]
Length = 599
Score = 484 bits (1233), Expect = e-135
Identities = 91/386 (23%), Positives = 159/386 (40%), Gaps = 29/386 (7%)
Query: 186 PSKGPSELAILIVNCLWEAFSPQVMEVWSKFTR--FSSTVEPSRAETK-RTVQFSPQYRV 242
G A ++ N L E + V V F + + E + + V + +
Sbjct: 201 AVVGKRRHAWIVGNGLEERYGDIVARVSEIFVQVFMNGGREEDSIQGEFMPVGSDGKIVL 260
Query: 243 LLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIETQIQYFVEDAEAYIKDDK 302
SLL +WD + + P+ + LA +A + +E+Q+ Y + D K
Sbjct: 261 SFSLLNSNPRDWVYDWDFQRIDEALLAPVTKALAPIANITVESQVLYHTPKSSFSSWDKK 320
Query: 303 ---FCTKHADLPNLVNNFEKYLSFSPHI--REPTIHFVLYVPSPQIQPLWLENEDSNIIP 357
+ + +DLP VN+ E +L S R + FV+Y+PS + PL L+ + I
Sbjct: 321 LQSYIFRTSDLPFFVNSNEWHLDTSAGASGRSKILQFVVYIPSGKECPLLLQLPNVEISK 380
Query: 358 TNSMLLPQWGSITTIN-FNVTEKK------LLHDVDLKDYFRVISRDLLLLLGINDVPV- 409
TN + P WG + N N + + DL+ + L G
Sbjct: 381 TNGFISPMWGGVIVWNPGNCDKDSESPSRNTISLQDLEQIVEIFLGQFRQLFGFKSEAKY 440
Query: 410 -SSLSATLA------------DRLLRQRIAESCIEASDTLQNLAKLVHSMQSMAVPKEIQ 456
+ L D L R+ + S TL +L++LV S+ M + EI
Sbjct: 441 TTGLGTYKILTSERGFTEWELDVLSRKHTCFNLHSCSTTLGSLSRLVRSLPRMIIKDEIG 500
Query: 457 MYVKDTLLSLDMAYKALSQNNLNEALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIY 516
VK +L + +A S + + S S A S ++ A FHPS+++ YF E + +Y
Sbjct: 501 EQVKYSLKAAKLAQSNASLGGYSSSASSSREARSLAENAFFHPSIMSVSYFSYEHCFAVY 560
Query: 517 APLFAPILIPLLISFIKEVKDMLRER 542
+P F P++ ++++ ++E K +E+
Sbjct: 561 SPFFLPVVGHVVLAAVREWKRYKQEK 586
Score = 37.3 bits (86), Expect = 0.59
Identities = 12/38 (31%), Positives = 19/38 (49%)
Query: 72 KRYALLSFYVIILLAIPVWWKTTHYERSSLPFEDMENA 109
+ + S LL +P WK+ RS LPF D+++
Sbjct: 30 RLFITSSVLFSFLLGVPFLWKSVEIYRSPLPFHDIDSL 67
>ref|NP_187374.1| (NM_111598) unknown protein [Arabidopsis thaliana]
gb|AAF20228.1|AC012395_15 (AC012395) unknown protein [Arabidopsis thaliana]
Length = 605
Score = 441 bits (1124), Expect = e-122
Identities = 85/361 (23%), Positives = 143/361 (39%), Gaps = 29/361 (8%)
Query: 186 PSKGPSELAILIVNCLWEAFSPQVMEVWSKFTR--FSSTVEPSRAETK-RTVQFSPQYRV 242
G A ++ N L E + V V F + + E + + V + +
Sbjct: 224 AVVGKRRHAWIVGNGLEERYGDIVARVSEIFVQVFMNGGREEDSIQGEFMPVGSDGKIVL 283
Query: 243 LLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIETQIQYFVEDAEAYIKDDK 302
SLL +WD + + P+ + LA +A + +E+Q+ Y + D K
Sbjct: 284 SFSLLNSNPRDWVYDWDFQRIDEALLAPVTKALAPIANITVESQVLYHTPKSSFSSWDKK 343
Query: 303 ---FCTKHADLPNLVNNFEKYLSFSPHI--REPTIHFVLYVPSPQIQPLWLENEDSNIIP 357
+ + +DLP VN+ E +L S R + FV+Y+PS + PL L+ + I
Sbjct: 344 LQSYIFRTSDLPFFVNSNEWHLDTSAGASGRSKILQFVVYIPSGKECPLLLQLPNVEISK 403
Query: 358 TNSMLLPQWGSITTIN-FNVTEKK------LLHDVDLKDYFRVISRDLLLLLGINDVPV- 409
TN + P WG + N N + + DL+ + L G
Sbjct: 404 TNGFISPMWGGVIVWNPGNCDKDSESPSRNTISLQDLEQIVEIFLGQFRQLFGFKSEAKY 463
Query: 410 -SSLSATLA------------DRLLRQRIAESCIEASDTLQNLAKLVHSMQSMAVPKEIQ 456
+ L D L R+ + S TL +L++LV S+ M + EI
Sbjct: 464 TTGLGTYKILTSERGFTEWELDVLSRKHTCFNLHSCSTTLGSLSRLVRSLPRMIIKDEIG 523
Query: 457 MYVKDTLLSLDMAYKALSQNNLNEALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIY 516
VK +L + +A S + + S S A S ++ A FHPS+++ YF E + +Y
Sbjct: 524 EQVKYSLKAAKLAQSNASLGGYSSSASSSREARSLAENAFFHPSIMSVSYFSYEHCFAVY 583
Query: 517 A 517
+
Sbjct: 584 S 584
Score = 34.6 bits (79), Expect = 4.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 67 PEKSLKRYALLSFYVIILLAIPVWWKTTHYERSSLPFEDMENA 109
E S+ L F V + +P WK+ RS LPF D+++
Sbjct: 48 SEFSISLPLLYPFPVSEVSGVPFLWKSVEIYRSPLPFHDIDSL 90
>gb|AAF56365.1| (AE003749) CG13644 gene product [Drosophila melanogaster]
Length = 347
Score = 401 bits (1021), Expect = e-110
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 33/335 (9%)
Query: 226 SRAETKRTVQFSPQYRVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIET 285
A+++ P Y V++S+L + W+I A++ Y P + +++ ++ + +
Sbjct: 1 MGAKSEAP---QPAYDVIVSVLNPKPRLTHAKWNIAMAVKTYIEPWLAKVSGVSNYTVRS 57
Query: 286 QIQYFV--EDAEAYIKDDKFCTKH-----ADLPNLVNNFEKYLSFSPHIREPTIHFVLYV 338
Q +Y V E ++D +H LP+L+ + + LS S +P I+ V+Y+
Sbjct: 58 QWKYRVAIEADLKQVRDQSKLGRHYALQETALPHLLTSIAQNLSAST-TDKPAINLVVYI 116
Query: 339 PSPQIQPLWLENEDSNIIPTN---SMLLPQWGSITTIN--------FNVTEKKLLHDVDL 387
P I PL + N + N + + P WG N ++ + + V
Sbjct: 117 PPCHIAPLHIYNSKDQRLTRNDVDAFISPPWGGFIIANPPEHVCLAAMSDQEAVPYHVST 176
Query: 388 KDYFRVISRDLLLLL---------GINDVPVSSLSATL--ADRLLRQRIAESCIEASDTL 436
D +V+ L LL G+ V + L + LR+ AS TL
Sbjct: 177 TDNMQVMLDQLHKLLDISSELQMEGVKVVDIEQLEPRRWEYEAYLRRSAIRHISTASSTL 236
Query: 437 QNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNEALSYSNNAFSKSQEAL 496
Q+L KL+ + + + E+ + ++ + A AL ++ L +A + AF S+
Sbjct: 237 QSLIKLLDQISYIVIDDEVGAAITNSYADILAAKAALLEHRLADASVLAKRAFVASERGF 296
Query: 497 FHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISF 531
F S++ +YFPDE KY IY PLF PI++P+L SF
Sbjct: 297 FDASLLAQLYFPDEQKYAIYIPLFLPIMVPVLSSF 331
>ref|NP_501852.1| (NM_069451) T14G10.7.p [Caenorhabditis elegans]
pir||T24913 hypothetical protein T14G10.7 - Caenorhabditis elegans
emb|CAA93093.1| (Z68880) predicted using Genefinder~cDNA EST EMBL:M89453 comes from
this gene~cDNA EST yk111h3.3 comes from this gene~cDNA
EST yk111h3.5 comes from this gene~cDNA EST yk457b10.3
comes from this gene~cDNA EST yk457b10.5 comes from this
gene~cDNA EST yk3>
Length = 544
Score = 378 bits (962), Expect = e-103
Identities = 65/438 (14%), Positives = 148/438 (32%), Gaps = 59/438 (13%)
Query: 111 STVQTHLR-----FSPTFRILDDKGNNLTKEVQKVLEAEPQIYSYNLKVLEDDPVDYRIV 165
+T LR +++ V V E E YS ++
Sbjct: 128 TTQFIGLRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEWTHYSAT---------RIQLG 178
Query: 166 LRESTDLQWFWDENN-----FIIDTPSKGPSELAILI--VNCLWEAFSPQVMEVWSKFTR 218
+ + +QW + SE I + +N + Q M+ W
Sbjct: 179 IGKWNFIQWPTKSEEKQKASTRVTDLV---SETLIDVPHLNSIVRRDLRQKMQPWQI--- 232
Query: 219 FSSTVEPSRAETKRTVQFSP---QYRVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQL 275
P + + +P Y + + L P + + + E++
Sbjct: 233 ---AALPLSHQKRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKV 289
Query: 276 ASLAKLNIETQIQY-FVEDAEAYIKD--DKFCTKHADLPNLVNNFEKYLSFSPHIREPTI 332
+ + + + + F IKD +++ H+ + LV + L S +
Sbjct: 290 KEITNVEVSFEHLWDFEPTRGFLIKDVQERWALTHSAMEELVKKVDSQLQTSLQ-HGAVL 348
Query: 333 HFVLYVPSPQIQPLWLENEDSNIIPTNSMLLPQWGSITTINFNVTEKKLLHDVDLKDYFR 392
FV+ ++P+ + ++ ++ + + WG++ N TE + + + ++
Sbjct: 349 RFVVL---ETVEPVIVLDDTGE--DSHGVAVASWGAVLPRN-EATESRAIAAIRIQMGM- 401
Query: 393 VISRDLLLLLGINDVPVSSLSATLADRLLRQRIAESCIEASDTLQNLAKLVHSMQSMAVP 452
D L G + PV+ +A LR ++ + A+ ++ L +L + ++ +
Sbjct: 402 ----DAELSHGWHRPPVAICQWEVARARLRA-SVDNAMRAASAVRALDQLAQKISNIVIN 456
Query: 453 KEIQMYVKDTLL---SLDMAYKALSQNNLNEALSYSNNAFSKSQEALFHPSMVTTIYFPD 509
++ + + + L L A + A S++ +YFP
Sbjct: 457 DDVADRATRAVEILNDVVRPGRMLDFERLL-------EARRLADSANSDHSLLAMLYFPM 509
Query: 510 ESKYGIYAPLFAPILIPL 527
+ + + PL PI++P+
Sbjct: 510 DQRTAVLIPLAVPIVLPI 527
Score = 128 bits (320), Expect = 2e-28
Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 22/121 (18%)
Query: 56 EVERSNFQLNKPEKSLKRYALLSFYV-IILLAIPVWWKTTHYERSSLPFEDMENAPSTVQ 114
E+ +S E+ K A LSF + + + +P+W TT RS+ P PS
Sbjct: 29 EITQSFINYVHSERPYKLAASLSFVILVFFIGMPMWHFTTSTYRSNFP-----TFPSNQS 83
Query: 115 THLRFSPTFRILDD--------KGNNLTKEVQKVLEAEPQIYSYNLKV--------LEDD 158
+ F I + N L + K P +++ + LE D
Sbjct: 84 ITVPIRVIFVITSEDLRNDVKTLMNELEVNMTKKEVVAPLDFTWTTQFIGLRSFEHLEQD 143
Query: 159 P 159
Sbjct: 144 H 144
>dbj|BAB70938.1| (AK055512) unnamed protein product [Homo sapiens]
Length = 184
Score = 199 bits (502), Expect = 1e-49
Identities = 48/167 (28%), Positives = 82/167 (48%), Gaps = 11/167 (6%)
Query: 378 EKKLLHDVDLKDYFRVISRDLLLLLGIND---VPVSSLSATLA--------DRLLRQRIA 426
+ +VD+ V L LL GI P LS + DRLL R
Sbjct: 2 PFPVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSV 61
Query: 427 ESCIEASDTLQNLAKLVHSMQSMAVPKEIQMYVKDTLLSLDMAYKALSQNNLNEALSYSN 486
E+ A+ TL +LA+L+ + ++ + ++ V + ++ + + L+ +L A S
Sbjct: 62 ENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQ 121
Query: 487 NAFSKSQEALFHPSMVTTIYFPDESKYGIYAPLFAPILIPLLISFIK 533
+ S+ A F PS++ +YFPD+ K+ IY PLF P+ +P+L+S +K
Sbjct: 122 EVVTSSELAFFDPSLLHLLYFPDDQKFPIYIPLFLPMAVPILLSLVK 168
>ref|XP_091596.1| (XM_091596) similar to phosphatidylinositol glycan, class S (H.
sapiens) [Homo sapiens]
Length = 204
Score = 195 bits (493), Expect = 1e-48
Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 22/183 (12%)
Query: 122 TFRILDDKGNNLTKEVQKVLEAEPQIYSYNLK----VLEDDPVDYRIVLRESTDLQWFWD 177
+I + + E + S +++ +L++ L +
Sbjct: 22 KMKIKCRFQKAYRRALDH---EEEALSSGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSL 78
Query: 178 ENNFIIDTPSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVEPS----------- 226
++ GP A++ EAF+ + S T +
Sbjct: 79 LPQDMM--SYIGPKRTAVVRGIMHREAFNIIGRRIVQVAQAMSLTEDVLAAALADHLPED 136
Query: 227 --RAETKRTVQFSPQYRVLLSLLVGEGNHEPINWDIENAIQKYFNPLIEQLASLAKLNIE 284
AE +R ++ S Y + SLL + + WDIE A+++Y P + L + +++
Sbjct: 137 KWSAEKRRPLKSSLGYEITFSLLNPDPKSHDVYWDIEGAVRRYVQPFLNALGAAGNFSVD 196
Query: 285 TQI 287
+Q+
Sbjct: 197 SQV 199
>gb|AAF56366.1| (AE003749) CG6031 gene product [Drosophila melanogaster]
Length = 164
Score = 156 bits (392), Expect = 9e-37
Identities = 28/150 (18%), Positives = 62/150 (40%), Gaps = 24/150 (16%)
Query: 65 NKPEKSLKRYALLSFYVIIL-LAIPVWWKTTHYERSSLPFEDMENA-----PSTVQTHLR 118
+K E + A L+F V+I+ + +P+WW+TT R +LP ++ + + VQ +
Sbjct: 15 DKDEDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIY 74
Query: 119 FSPTFR---ILDDKGNNLT---------KEVQKVLEAEPQIYSYNL-KVLEDDPVDYRIV 165
T R ++ + N + K++ + L K+L ++ V
Sbjct: 75 TQQTSRGQLLIAELQNAFSDNEIWSVEFKQLSPTPMTQEAHTPAALEKLLLENHVQ---S 131
Query: 166 LRESTDLQWFWDENNFIIDT--PSKGPSEL 193
+ + ++W + ++ T + S+
Sbjct: 132 VGDFMFIEWPKLQEELLLTTERSALMRSDT 161
>ref|NP_126656.1| (NC_000868) SIMILAR TO SEVERAL DNA HELICASES [Pyrococcus abyssi]
pir||B75073 ATP-dependent RNA helicase homolog PAB1722 - Pyrococcus abyssi
(strain Orsay)
emb|CAB49887.1| (AJ248286) SIMILAR TO SEVERAL DNA HELICASES [Pyrococcus abyssi]
Length = 872
Score = 35.8 bits (82), Expect = 1.9
Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 17/129 (13%)
Query: 190 PSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVE-------PSRAETKRTVQFSPQYRV 242
P+ +AI N + + F +E P + +R + Y +
Sbjct: 374 PNRVAI---NGIVLRRNGLDYYYKEHFEELVEGIEKGLVEGIPVNLDNERIAKKHLHYLL 430
Query: 243 L---LSLLVGEGNHEPIN---WDIENAIQKYFNPLIEQLA-SLAKLNIETQIQYFVEDAE 295
+ + H I E +++Y NPL ++ + K I + I+ +++
Sbjct: 431 SELGVVDVNEIPEHWRIALRPLKEEGIVEEYLNPLTNKVEIRIKKPAIYSSIRSTSDESF 490
Query: 296 AYIKDDKFC 304
+KD+ +
Sbjct: 491 FLVKDEGWI 499
CPU time: 111.77 user secs. 2.64 sys. secs 114.41 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.314 0.169 0.459
Gapped
Lambda K H
0.270 0.0591 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303954436
Number of Sequences: 887402
Number of extensions: 13423063
Number of successful extensions: 33745
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 33656
Number of HSP's gapped (non-prelim): 30
length of query: 554
length of database: 277,845,442
effective HSP length: 58
effective length of query: 496
effective length of database: 226,376,126
effective search space: 112282558496
effective search space used: 112282558496
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.1 bits)
S2: 76 (33.7 bits)
