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GPI Anchor Biosynthesis Report: AAF59557.2 (PIG-N family, Caenorhabditis elegans)



Sequence Analysis
Name From To Source/E Description
TM 1 21 toppred2=1.479  
COG1524: Uncharacterized proteins of the AP superfamily 1 354 COG: E=2.7e-07  
PF01663: Type 1 Phosphodiesterase/ Nucleotide Pyrophosphatase 38 347 Pfam E=39  
PF00884: Sulfatase 46 415 Pfam E=0.15  
ASN_GLYCOSYLATION 127 130 PROSITE Pattern PS00001 NRSS
Cluster 158 199 SAPS Mixed charge cluster
PF01676: Metalloenzyme Superfamily 180 297 Pfam E=0.24  
TM 301 321 toppred2=1.391  
TM 415 435 toppred2=2.088  
TM 452 472 toppred2=1.891  
LCR 475 487 SEG 12 2.2 2.5  
TM 523 543 toppred2=2.352  
LCR 545 557 SEG 12 2.2 2.5  
TM 546 566 toppred2=1.534  
TM 572 592 toppred2=2.188  
TM 624 644 toppred2=1.354  
LCR 648 671 SEG 12 2.2 2.5  
Cluster 648 677 SAPS Positive charge cluster
TM 678 698 toppred2=1.555  
TM 719 739 toppred2=1.879  
LCR 724 741 SEG 12 2.2 2.5  
TM 770 790 toppred2=1.691  
TM 796 816 toppred2=2.024  
LCR 812 824 SEG 12 2.2 2.5  
TM 842 862 toppred2=1.422  
TM 876 896 toppred2=2.169  
LCR 885 898 SEG 12 2.2 2.5  


Sequence Information
Protein AAF59557.2
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|16950509|gb|AAF59557.2|AAF59557 Hypothetical protein Y54E10BR.1 [Caenorhabditis elegans].
    Protein Sequence 
    MSWKFLIASI TVHLVLIYSI FDVYYTSPLV HGIPPQFINS QEAPAKRIFI ISADGLRYDT
FNKYPDKSPY LHSIMNERKG IYGLSRSHIP TESRPGHVAI FAGITEDISA VAKGWKKNPV
QFDSVFNRSS YSWMWGSPDI VNLFDDLPNA ESFSYSADEE DFASKDASNL DKWVFEHFEN
FLETAKTDEA LNDKMREQKS IFFLHLLGID TNGHGNKPMS RQYIDNIKVV DSGIEKVQHL
VDAFFGDHKT AWLFTSDHGM TDWGSHGAGS DDEVLTPFVA WGAGVKQGGP KLDLNQIDLA
PLISALIGCP IPVNSMGILP VQMMNSKGSS YEFKAIEANF KQLKEQIIFL KNAKSRRLWF
RQFEKFGDKA MESLRTTLAQ LGRDRRFSVA TSLFADNAHL MKEAIVFYHR YDRQMLGAAV
SCSFVAWIAL VVSFLHNSTS KENLSLLVPH HLFIIPLACS LLFTAYCSLS MTQTIYIILP
IYLISILENH SKLTQRIREH VKALSAQPDW LNKVLSVEVF VKPFLGFVGF SITICIFVLT
FMDRAFLAAV FVLLMALPQF YSHPIVSYWS KTWLTLCLVL CIFPFLPAVG VSTHIPLCIL
SPIITAFLCH RLSRRSCLTR IQRMLELMIY VQSATAFMIA VVNYGFEKVK KLIQNNWKKK
KSNSKSSQSL QPPSIARWIS WTSIPLSVIA PSLLTGPYLV DRLIAYALCF YVPYSLLSIS
YESLFMLIFL VLLTLFVRFE FGHLSDVELL QLKVDSTKIS TGEYVELRRT VVCVSFVLCP
LFGTGNFASI NSFNPSTLNL FISVFSPFTM AILLILKLLI PILLVTSAFA SIVRFDQESI
QRLCCFSLIF TDFMSMCFFH QLRDEGSWLD IGMSISQFIV SMCISLALLL LLSISSHLMA
FEFRKFPGKR NHQEIESISS RKLSDDESA


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003