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GPI Anchor Biosynthesis Report: T18769 (PIG-M family, Caenorhabditis elegans)



Sequence Analysis
Name From To Source/E Description
TM 16 36 toppred2=1.076  
DXD motif 46 48 DID within the ER lumen
TM 90 110 toppred2=1.245  
cluster 111 130 SAPS mixed charge cluster
TM 129 149 toppred2=1.026  
LCR 155 167 SEG 12 2.2 2.5  
TM 186 206 toppred2=1.396  
TM 224 244 toppred2=2.225  
TM 284 304 toppred2=1.895  
TM 327 347 toppred2=1.267  
TM 353 373 toppred2=1.723  
TM 380 400 toppred2=2.147  


Sequence Information
Protein T18769
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|7494962|gb|T18769|T18769 hypothetical protein B0491.1 - Caenorhabditis elegans.
    Protein Sequence 
    MQCVRSFVKN ETFNRNKILL VAFVARIILV FYAHIHDYLF KVNFTDIDYH VFSDAAKHVS
NGGSPFDRAT YRYTPALAWI LLPVVHFPDF GKILFCIFDI LVAILYFKIM EKDLNETKSE
TREEMKDDQT MNVVIYWLAN PLTAIISARG NAESIVAAVV LLNIVLLQKG YWKSAALVHG
ALAIQLKIYP LIYLPSVFLS LSTIGEQSCV VNKFKSLVSN WKGFAYMLVT LTSFAAVVLF
FFQIYGQLFL DEYLIYHVKR RDLAHNFSPY FYLLYLYEAN PTMSQIIGLG AFIPQIVLIV
FFAFKHYDDL PFCWFITTFA FVTYNKVCTS QYFVWYIVLL PLLAHKIMMS RQLALSLMAA
WFATQGIWLL AAYLFEFQGW NTFFLMFLAS CLFLIANSFI LKQIINHYVP IVKPKTD


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003