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GPI Anchor Biosynthesis Report: NP_077058.1 (PIG-M family, Rattus norvegicus)



Sequence Analysis
Name From To Source/E Description
TM 18 38 toppred2=1.343  
DXD motif 49 51 DID within the ER lumen
LCR 104 119 SEG 12 2.2 2.5  
TM 123 143 toppred2=1.240  
TM 164 184 toppred2=1.079  
cluster 195 221 SAPS mixed charge cluster
TM 225 245 toppred2=2.349  
TM 286 306 toppred2=1.798  
TM 330 350 toppred2=1.611  
LCR 337 354 SEG 12 2.2 2.5  
TM 357 377 toppred2=1.873  
TM 384 404 toppred2=2.177  


Sequence Information
Protein NP_077058.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|13162329|gb|NP_077058.1|NP_077058 PIG-M mRNA for mannosyltransferase [Rattus norvegicus].
    Protein Sequence 
    MSYTKHWGEW FLNLRVPPAG VFGVAFLARV ALVFYGVFQD RTLLVRYTDI DYHVFTDAAR
FVTEGRSPYL RATYRYTPLL SWLLTPNVYL SELFGKFLFI SCDLLTAFLL YRLLLLKGLG
RRQACGYCVF WLLNPLPMAV SSRGNADSIV ASLVLTTLYL IEKRLIACAA VFYGFAVHMK
MYPVTYILPI ALHLRPERDS DEGLRLARYS FQARLYDFLK RLCSWAVLLF VAIAGLTFLA
LSFGFYYKYG WEFLEHTYLY HLTRRDIRHN FSPYFYMLYL TAESKWSFTL GIAAFLPQFI
LLSAASFAYY RDLVFCCFLH TSIFVTFNKV CTSQYFLWYL CLLPLVMPLV RMPWKRAVVL
LMLWFIGQAL WLAPAYVLEF QGKNTFLFIW LAGLFFLLIN CSILIQIISH YKEDRLTERI
KYD


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003