Sequences with E-value BETTER than threshold (0.002) 292 4e-78
175 8e-43
171 2e-41
170 4e-41
165 1e-39
163 3e-39
161 1e-38
160 2e-38
158 9e-38
158 9e-38
156 4e-37
155 2e-36
154 3e-36
148 1e-34
146 6e-34
145 1e-33
144 2e-33
144 2e-33
143 4e-33
143 4e-33
142 7e-33
142 1e-32
138 2e-31
138 2e-31
137 2e-31
136 5e-31
136 5e-31
136 6e-31
135 8e-31
135 8e-31
132 6e-30
132 7e-30
129 7e-29
128 1e-28
128 2e-28
123 3e-27
123 4e-27
120 4e-26
118 2e-25
117 2e-25
113 5e-24
112 1e-23
111 2e-23
111 2e-23
110 2e-23
108 1e-22
106 6e-22
95 2e-18
69 1e-10
Alignments
>ref|NP_014008.1| (NC_001145) N-acetylglucosaminylphosphatidylinositol
de-N-acetylase; Gpi12p [Saccharomyces cerevisiae]
sp|P23797|GP12_YEAST N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
pir||S54588 probable membrane protein YMR281w - yeast (Saccharomyces
cerevisiae)
emb|CAA89779.1| (Z49704) unknown [Saccharomyces cerevisiae]
dbj|BAA74776.1| (AB017166) GPI12 [Saccharomyces cerevisiae]
Length = 304
Score = 292 bits (742), Expect = 4e-78
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 57/329 (17%)
Query: 31 LTKLTNVSIKTQTFQHYYPYTSLVNTPKNSNSINIITNS----NITYIIAHPDDEVMFFA 86
L K+T ++I Y +T + + N++ +I + I +IAHPDDEVMFF+
Sbjct: 15 LYKITKLAIVLTI--LYIYFTPKIVSRNNASLQHIFPHKYGDYEINLVIAHPDDEVMFFS 72
Query: 87 PSIIELKKP-KYNNQINLICFSKGNYIKSMDEIRQSELIQSSRILGIDQ----VSILDYQ 141
P I +L N+IC SKGN + + E R EL +S+ +L ++ V ++D+Q
Sbjct: 73 PIISQLNSYFPRTVPFNIICLSKGNA-EGLGETRVRELNESAALLLHNERAVSVQVMDFQ 131
Query: 142 DGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTK 201
DGM+E W ++ I SL + + D ++N +++TFD GVSNH NH S + K
Sbjct: 132 DGMDEIWDIDSITSSLSQKI-------DIKNHNLNQIIVTFDSYGVSNHINHKSCYAAVK 184
Query: 202 KYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSSTKFYVLKSL--NFFEKYSFTILGNI 259
K + + + +N+ L+S N KY+ I +
Sbjct: 185 KLVDDYAQPKTKRNEQP----------------PHVTALYLRSYKNNIVLKYNSFIWEIL 228
Query: 260 EILFNFISLLIKKFINININVSFFSNQIIKSKFDNNNNNLQLQNLNDIRFYSDLNMLSLS 319
+IL++ IS ++ I Q + + L L N + L+
Sbjct: 229 KILYDLISPF-RRII-----------QALPPNTAAEKDKLSLMNTH--------AQYVLA 268
Query: 320 YAAMAYGHFSQMVWFRYAWLLLSRYLTYN 348
+A M H SQ+VWFRY W + SR++ N
Sbjct: 269 FATMLNAHESQVVWFRYGWWIFSRFVFVN 297
>ref|NP_403747.1| (NC_003143) hypothetical protein [Yersinia pestis]
emb|CAC88949.1| (AJ414141) hypothetical protein [Yersinia pestis]
Length = 310
Score = 175 bits (441), Expect = 8e-43
Identities = 41/209 (19%), Positives = 69/209 (32%), Gaps = 44/209 (21%)
Query: 7 LILLRLYITSFIIWIFQTTILPQ--TLTKLTNVSIKTQTFQHYYPYTSLVNTP------K 58
+ ++ + + SF IF+ IL +L K + KT HY+P P K
Sbjct: 6 ICIIFIELRSFFFCIFRRVILFNFFSLNKTCRLGNKT----HYFPLIKPCQNPRQLKQQK 61
Query: 59 NSNSINIITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK----- 113
+ +I + AH D V +I + Y Q++++C S G +
Sbjct: 62 KEKDMAMIPQKTALVVSAHSADFVWRAGGAIALHVEQGY--QVHIVCLSYGERGESAKLW 119
Query: 114 ---SMDEIRQS-----ELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTS 165
M E R E ++ +LG + D D L +
Sbjct: 120 RKGDMTEERVKASRHTEAQAAANVLGAS-IEFFDMGDYP------------LRADKESLF 166
Query: 166 SGSDTNSNNKPSVLITF---DDQGVSNHP 191
+D +P ++T D HP
Sbjct: 167 RLADVFRRIQPHFVLTHSLADPYNYD-HP 194
>sp|Q9HDW9|PIGL_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
emb|CAC21467.1| (AL512549) putative N-acetylglucosaminyl phosphatidylinositol
deacetylase [Schizosaccharomyces pombe]
Length = 248
Score = 171 bits (430), Expect = 2e-41
Identities = 54/217 (24%), Positives = 96/217 (43%), Gaps = 45/217 (20%)
Query: 45 QHYYPYTSLVNTPKNSNS-INIITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINL 103
++++T S+S + +I ++ AHPDDE MFF P+I L ++ ++++
Sbjct: 7 TLLVTAIAVLSTANESSSGQEKLAVESILFVFAHPDDESMFFGPTIDYLGNQ-HSTRVHV 65
Query: 104 ICFSKGNYIKSMDEIRQSELIQSSRILGIDQ-----VSILDYQDGMNETWQLNDIVQSLH 158
+C S GN + +R+ EL+ ++ ID+ VS QDGM W D+ + +
Sbjct: 66 LCLSNGNA-DGLGSVREKELVVAASKYQIDKTNVHVVSDPQLQDGMQAKWDPTDVAKHIS 124
Query: 159 ENLSPTSSGSDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTR 218
+ LITFD++G+S HPNHI+ + G K ++
Sbjct: 125 Q----------IIERYNIKTLITFDNKGISGHPNHIACYEGAMKIVK------------- 161
Query: 219 IKTTTTTINYIDIDSSSSTKFYVLKSLNFFEKYSFTI 255
++ + +VL+S+N F KY +
Sbjct: 162 --------------ATPQVQVFVLESVNIFRKYISYL 184
Score = 63.9 bits (154), Expect = 4e-09
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 322 AMAYGHFSQMVWFRYAWLLLSRYLTYNHL 350
AM GH SQMVWFRY W+ LS+Y++ N L
Sbjct: 216 AMVRGHKSQMVWFRYGWIYLSKYMSNNVL 244
>ref|NP_215598.1| (NC_000962) hypothetical protein Rv1082 [Mycobacterium tuberculosis
H37Rv]
ref|NP_335555.1| (NC_002755) lmbE protein [Mycobacterium tuberculosis CDC1551]
pir||H70894 hypothetical protein Rv1082 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA17198.1| (AL021897) hypothetical protein Rv1082 [Mycobacterium tuberculosis
H37Rv]
gb|AAK45369.1| (AE006992) lmbE protein [Mycobacterium tuberculosis CDC1551]
Length = 288
Score = 170 bits (427), Expect = 4e-41
Identities = 29/173 (16%), Positives = 61/173 (34%), Gaps = 20/173 (11%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSM----------- 115
+ + + AHPDDE A ++ + ++ ++ + G + +
Sbjct: 2 SELRLMAVHAHPDDESSKGAATLARYADEGH--RVLVVTLTGGERGEILNPAMDLPDVHG 59
Query: 116 --DEIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPT----SSGSD 169
EIR+ E+ +++ ILG++ + L + D L + P +
Sbjct: 60 RIAEIRRDEMTKAAEILGVEH-TWLGFVDSGLPKGDLPPPLPDDCFARVPLEVSTEALVR 118
Query: 170 TNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTT 222
+P V+ T+D+ G HP+HI + + + T
Sbjct: 119 VVREFRPHVMTTYDENGGYPHPDHIRCHQVSVAAYEAAGDFCRFPDAGEPWTV 171
>emb|CAC18708.2| (AL451182) conserved hypothetical protein [Streptomyces coelicolor]
Length = 293
Score = 165 bits (415), Expect = 1e-39
Identities = 30/169 (17%), Positives = 61/169 (35%), Gaps = 21/169 (12%)
Query: 65 IITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMD-------- 116
+ + + AHPDDE A ++ + + ++ + G ++
Sbjct: 1 MTDQLRLMAVHAHPDDESSKGAATMAKYVSEG--VDVLVVTCTGGERGSILNPKLQGDAY 58
Query: 117 ------EIRQSELIQSSRILGIDQVSILDYQDGMN-ETWQLNDIVQ---SLHENLSPTSS 166
E+R+ E+ ++ ILG+ Q L + D E L + + +L +
Sbjct: 59 IEENIHEVRRKEMDEAREILGVGQ-EWLGFVDSGLPEGDPLPPLPEGCFALEDVDKAAGE 117
Query: 167 GSDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKN 215
+ +P V+ T+D+ G HP+HI T + +
Sbjct: 118 LVRKIRSFRPQVITTYDENGGYPHPDHIMTHKITMVAFEGAADTEKYPE 166
>emb|CAC05756.1| (AL391751) hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 295
Score = 163 bits (410), Expect = 3e-39
Identities = 32/161 (19%), Positives = 58/161 (35%), Gaps = 20/161 (12%)
Query: 66 ITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK------------ 113
+ + + AHPDDE + ++ + + L+ + G +
Sbjct: 4 LPGRRLLLVHAHPDDESINNGVTMARYAAEGAH--VTLVTCTLGERGEVIPPALAHLSGA 61
Query: 114 SMDEIRQSELIQSSRILGIDQVSILD----YQDGMNETWQLNDIVQSLHE--NLSPTSSG 167
++ R+ EL + R LG+D +L Y D ND L + + +
Sbjct: 62 ALGGHRRGELADAMRALGVDDFRLLGGPGRYADSGMLGLSDNDDPGCLWQADVDAAAALL 121
Query: 168 SDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELR 208
D +P VL+T+D G HP+HI + +
Sbjct: 122 VDVIREVRPQVLVTYDPNGGYGHPDHIQAHRIAMRAAELAA 162
>ref|NP_293807.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||G75562 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF09674.1|AE001871_6 (AE001871) conserved hypothetical protein [Deinococcus radiodurans]
Length = 237
Score = 161 bits (405), Expect = 1e-38
Identities = 32/214 (14%), Positives = 72/214 (32%), Gaps = 45/214 (21%)
Query: 71 ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMD---------EIRQS 121
+ I+ HPDDEV + +++E + L+ ++G +++ +R
Sbjct: 15 LLLIVPHPDDEVYGASGTLMEYLAAGESCG--LVTLTRGEAGRTLGLCDGPEELARMRAV 72
Query: 122 ELIQSSRILGI-----DQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKP 176
EL ++G+ + D + + ++V++ E +P
Sbjct: 73 ELAACLEVIGLTTTPGSLHEQHQFPDKYLKDYPFEELVETAREA----------MERLRP 122
Query: 177 SVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSEN-----KNKTRIKTTTTTINYIDI 231
++TF G + HP+H++ K L S ++T + ++
Sbjct: 123 ETVLTFPPNGSNGHPDHMTTHRAVKAAWDRLPAGSRPVLWYYASETPPENEELRAAWLPP 182
Query: 232 DSSSSTKFYV--------------LKSLNFFEKY 251
V L +++F K+
Sbjct: 183 TVKRDVSALVTRKLQAIACHRSQALSTVDFIRKF 216
>emb|CAC16965.1| (AL450350) conserved hypothetical protein [Streptomyces coelicolor]
Length = 277
Score = 160 bits (403), Expect = 2e-38
Identities = 33/159 (20%), Positives = 59/159 (36%), Gaps = 20/159 (12%)
Query: 65 IITN-SNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSK--------------- 108
+ + + AHPDDE + + L+ +
Sbjct: 1 MTDRPLTLMAVHAHPDDEATSTGGVLARYAAEG--IRTVLVTCTDGGCGDGPGGVKPGDP 58
Query: 109 GNYIKSMDEIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHEN--LSPTSS 166
G+ ++ +R+ EL +S IL I + LDY D W ND S +
Sbjct: 59 GHDPAAVALMRRRELEESRDILKISDLETLDYADSGMMGWPSNDAPGSFWRTPVEEGAAR 118
Query: 167 GSDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQ 205
++ + +P V++T+D+ G HP+HI T ++
Sbjct: 119 LAELMRHYRPDVVVTYDENGFYGHPDHIQAHRITMAALE 157
>ref|NP_302547.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
gb|AAA63037.1| (U15183) lmbE gene product [Mycobacterium leprae]
emb|CAC31907.1| (AL583925) conserved hypothetical protein [Mycobacterium leprae]
Length = 290
Score = 158 bits (398), Expect = 9e-38
Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 20/173 (11%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSM----------- 115
+ + + AHPDDE A ++ + ++ ++ + G + +
Sbjct: 2 SELRLMAVHAHPDDESSKGAATLARYADEGH--RVLVVTLTGGERGEILNPAMDLPDVHG 59
Query: 116 --DEIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPT----SSGSD 169
EIR+ E+ +++ ILG++ + L + D + L P +
Sbjct: 60 HIAEIRRDEMAKAAEILGVEH-TWLGFIDSGLPKGDPPPPLPDDCFALVPLEVCTEALVR 118
Query: 170 TNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTT 222
+P VL T+D+ G HP+HI + + + + T
Sbjct: 119 VVRKFRPHVLTTYDENGGYPHPDHIRCHQVSVDAYEAACDYRRFPDAGKPWTV 171
>ref|NP_294173.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||F75517 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10027.1|AE001904_3 (AE001904) conserved hypothetical protein [Deinococcus radiodurans]
Length = 281
Score = 158 bits (398), Expect = 9e-38
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 13/148 (8%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI---------KSMDE 117
+ + I AHPDDE ++ + ++ L C ++G +
Sbjct: 9 PRATLLVIFAHPDDEAFSVGGTLTHYARQG--VRVVLACATRGEAGKITVPGMTVDDLGA 66
Query: 118 IRQSELIQSSRILGIDQVSILDYQDGM-NETWQLNDIVQSL-HENLSPTSSGSDTNSNNK 175
R+ EL ++ R L I+ LDY D E + +D + L + +
Sbjct: 67 QREQELREACRALEIEPPVFLDYHDSGRYERTRHDDPTALMNVNPLDAEVKLRALIEDVQ 126
Query: 176 PSVLITFDDQGVSNHPNHISLFHGTKKY 203
P V++TFD G H +H+ + T
Sbjct: 127 PQVIVTFDPHGAYGHVDHLQMHRATVAA 154
>ref|NP_302050.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
emb|CAC30445.1| (AL583922) conserved hypothetical protein [Mycobacterium leprae]
Length = 308
Score = 156 bits (392), Expect = 4e-37
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 22/151 (14%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK---------------S 114
+ ++ AHPDDE + +I Q+ + + G +
Sbjct: 6 RLLFVHAHPDDESLSNGATIAHYTSRGAQVQV--VTCTLGEEGEVIGDRWAELTVDHADQ 63
Query: 115 MDEIRQSELIQSSRILGIDQVSILD----YQDGMNETWQLNDIVQSLHENL-SPTSSGSD 169
+ R EL ++ R LG+ L ++D + + + +
Sbjct: 64 LGGYRIFELTEALRALGVSAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGALVA 123
Query: 170 TNSNNKPSVLITFDDQGVSNHPNHISLFHGT 200
+P V++T+D G HP+H+ T
Sbjct: 124 IIRELRPHVVVTYDPHGGYGHPDHVHTHFIT 154
>sp|O35790|PIGL_RAT N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
(Phosphatidylinositol-glycan biosynthesis, class L
protein) (PIG-L)
dbj|BAA20869.1| (D88364) PIG-L [Rattus norvegicus]
Length = 252
Score = 155 bits (388), Expect = 2e-36
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 42/192 (21%)
Query: 69 SNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSSR 128
S +IAHPDDE MFFAP+I+ L + K Q++L+CFS GNY + EIR+ EL+QS
Sbjct: 41 SRALVVIAHPDDEAMFFAPTILGLARLKQ--QVSLLCFSSGNYY-NQGEIRKKELLQSCA 97
Query: 129 ILGIDQVSIL-----DYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFD 183
+LGI ++ ++ D W + ++ +++ ++ +++TFD
Sbjct: 98 VLGIPPSRVMIIDKREFPDDPEVQWDTEHVASTILQHIHANAT----------DLVVTFD 147
Query: 184 DQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSSTKFYVLK 243
+GVS H NHI+L+ + + + L+
Sbjct: 148 AEGVSGHSNHIALYKAVR--------------------ALHSGGKLPEG----CSVLTLQ 183
Query: 244 SLNFFEKYSFTI 255
S+N KY F +
Sbjct: 184 SVNVLRKYVFLL 195
Score = 35.8 bits (82), Expect = 1.00
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 301 LQNLNDIRFYSDLNMLSLSYAAMAYGHFSQMVWFRYAWLLLSRYLTYNHL 350
L + + F ++ + AM H SQ++WFR+ + + SRY++ N L
Sbjct: 201 LLSPQGVLFVLTSKEVAQAKKAM-SCHRSQLLWFRHLYTVFSRYMSVNSL 249
>ref|NP_244186.1| (NC_002570) BH3320~unknown conserved protein [Bacillus halodurans]
dbj|BAB07039.1| (AP001518) BH3320~unknown conserved protein [Bacillus halodurans]
Length = 227
Score = 154 bits (386), Expect = 3e-36
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 65 IITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMD-------- 116
+ ++ I HPDDE + +I +K + C + G +++
Sbjct: 1 MNQERHVLVIFPHPDDEAFGVSGTIALFRKQG--VPVTYACLTLGEMGRNLGNPPFATRE 58
Query: 117 ---EIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSN 173
+IR+ ELI+S+ +GI+ + +L Y+D E + + SD +
Sbjct: 59 SLPDIRKKELIKSAEAMGIEDLRMLGYRDKTIEFEDETKLTDMV----------SDLMAE 108
Query: 174 NKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENK 214
PS++ITF G S HP+H + + ++ L + K
Sbjct: 109 LNPSLIITF-YPGYSVHPDHEATGRAVVRAVRRLEKSMRPK 148
>gb|AAF55732.1| (AE003728) CG4433 gene product [Drosophila melanogaster]
Length = 390
Score = 148 bits (372), Expect = 1e-34
Identities = 48/211 (22%), Positives = 81/211 (37%), Gaps = 56/211 (26%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGN------------YIKSMDE 117
+ I AHPDDE MFF P I L + Q+ ++C S G +++++E
Sbjct: 141 RVLLITAHPDDECMFFGPLIYSLTQR-QGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
Query: 118 --------IRQSELIQSSRILGIDQVSIL-----DYQDGMNETWQLNDIVQSLHENLSPT 164
+R+ EL +S LGI + +I+ + D W+ + + +
Sbjct: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLIL------ 253
Query: 165 SSGSDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTT 224
T + + TFD GVS+HPNH ++++ +
Sbjct: 254 ----HTIESLDIQAIFTFDRDGVSSHPNHCAVYYAA--------------------ASLC 289
Query: 225 TINYIDIDSSSSTKFYVLKSLNFFEKYSFTI 255
N + + KFY L S+N KY +
Sbjct: 290 LANLLPKGEEAYCKFYTLDSINVVRKYLSIL 320
Score = 40.1 bits (93), Expect = 0.053
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 302 QNLNDIRFYSDLNMLSLSYAAMAYGHFSQMVWFRYAWLLLSRYLTYNHL 350
+ + + S AM H SQM WFR+ ++ SRY+ N +
Sbjct: 328 MSTHWCILNWKEAAIVRS--AMME-HQSQMRWFRWLYIYFSRYMFINSM 373
>ref|NP_371091.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373778.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB41756.1| (AP003131) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56729.1| (AP003359) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 221
Score = 146 bits (366), Expect = 6e-34
Identities = 26/161 (16%), Positives = 61/161 (37%), Gaps = 24/161 (14%)
Query: 65 IITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMD-------- 116
+ ++ I HPDDE A ++ + + C + G +++
Sbjct: 1 MTDERHVLVIFPHPDDETFSSAGTLASYIQKG--IPVTYACLTLGQMGRNLGNPPFATRE 58
Query: 117 ---EIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSN 173
IR+ EL ++ +++GI + + +D E I + +
Sbjct: 59 SLPSIRERELEEACKVIGITDLRKMGLRDKTVEFEPYEHIDGMI----------KSLIDD 108
Query: 174 NKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENK 214
PS++I+F G + HP+H + + ++ + ++ +
Sbjct: 109 TNPSLIISF-YPGYAVHPDHEATADAVIRTVERMPKEERPR 148
>ref|NP_004269.1| (NM_004278) phosphatidylinositol glycan, class L [Homo sapiens]
sp|Q9Y2B2|PIGL_HUMAN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
(Phosphatidylinositol-glycan biosynthesis, class L
protein) (PIG-L)
dbj|BAA74775.1| (AB017165) PIG-L [Homo sapiens]
Length = 252
Score = 145 bits (363), Expect = 1e-33
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 42/190 (22%)
Query: 68 NSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSS 127
S +IAHPDDE MFFAP+++ L + ++ + L+CFS GNY + E R+ EL+QS
Sbjct: 40 ESRTLLVIAHPDDEAMFFAPTVLGLARLRHW--VYLLCFSAGNYY-NQGETRKKELLQSC 96
Query: 128 RILGIDQVSIL-----DYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITF 182
+LGI S++ D+ D W + + L ++ N ++++TF
Sbjct: 97 DVLGIPLSSVMIIDNRDFPDDPGMQWDTEHVARVLLQH----------IEVNGINLVVTF 146
Query: 183 DDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSSTKFYVL 242
D GVS H NHI+L+ + + + L
Sbjct: 147 DAGGVSGHSNHIALYAAVR--------------------ALHSEGKLPKG----CSVLTL 182
Query: 243 KSLNFFEKYS 252
+S+N KY
Sbjct: 183 QSVNVLRKYI 192
Score = 39.3 bits (91), Expect = 0.090
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 299 LQLQNLNDIRFYSDLNMLSLSYAAMAYGHFSQMVWFRYAWLLLSRYLTYNHL 350
L L + D+ F + ++ + AM H SQ++WFR +++ SRY+ N L
Sbjct: 199 LSLLHTQDVLFVLNSKEVAQAKKAM-SCHRSQLLWFRRLYIIFSRYMRINSL 249
>ref|NP_390128.1| (NC_000964) alternate gene name: jojG~similar to hypothetical
proteins [Bacillus subtilis]
sp|P42981|YPJG_BACSU Hypothetical 24.8 kDa protein in DAPB-PAPS intergenic region
pir||F69937 conserved hypothetical protein ypjG - Bacillus subtilis
gb|AAA92876.1| (L38424) unknown [Bacillus subtilis]
gb|AAB38444.1| (L47709) putative [Bacillus subtilis]
emb|CAB14163.1| (Z99115) alternate gene name: jojG~similar to hypothetical proteins
[Bacillus subtilis]
Length = 224
Score = 144 bits (362), Expect = 2e-33
Identities = 30/191 (15%), Positives = 60/191 (30%), Gaps = 29/191 (15%)
Query: 68 NSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKS-MDEIRQSELIQS 126
N+++ AH DD + +I + K + ++ + ++ + +R+ E ++
Sbjct: 3 NADVLAFGAHSDDVEIGMGGTIAKFVKQEK--KVMICDLTEAELSSNGTVSLRKEEAAEA 60
Query: 127 SRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQG 186
+RILG D+ L D S +P + F
Sbjct: 61 ARILGADKRIQLTLPDRGLIMSDQ------------AIRSIVTVIRICRPKAV--FMPYK 106
Query: 187 VSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINY------------IDIDSS 234
HP+H + ++ I K+ + + Y IDI +
Sbjct: 107 KDRHPDHGNAAALVEEAIFSAGIHKYKDEKSLPAHKVSKVYYYMINGFHQPDFVIDISDT 166
Query: 235 SSTKFYVLKSL 245
K L +
Sbjct: 167 IEAKKQSLNAY 177
>emb|CAB67717.1| (AJ271405) hypothetical protein [Streptomyces rochei]
Length = 234
Score = 144 bits (360), Expect = 2e-33
Identities = 20/199 (10%), Positives = 59/199 (29%), Gaps = 35/199 (17%)
Query: 65 IITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELI 124
+ +++ + HPDD+V+ S+ + + ++ ++ D + ++E
Sbjct: 1 MTGVTDVLVVAPHPDDDVIGCGGSMAKHVREG--ARVTVVVVIGRERSALDDAVTEAEFA 58
Query: 125 Q----SSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLI 180
+++ILG+ + + + + I +P V+
Sbjct: 59 AETENAAKILGVH--RCVRFDESSRDFAPSRRI----------HLDLVRVLREVRPQVV- 105
Query: 181 TFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKT---RIKTTTTTINYI-------- 229
+ + H + T + + + + + +
Sbjct: 106 -YLPHDNDDDVEHRMVHRLTTEAL-WMAQSEFFQEAGECPMPAPRLVLGYEVWSPMARYQ 163
Query: 230 ---DIDSSSSTKFYVLKSL 245
DI TK +++
Sbjct: 164 YAEDIGEHIHTKVEAMRAY 182
>ref|NP_294927.1| (NC_001263) LmbE-related protein [Deinococcus radiodurans]
pir||B75424 LmbE-related protein - Deinococcus radiodurans (strain R1)
gb|AAF10773.1|AE001969_2 (AE001969) LmbE-related protein [Deinococcus radiodurans]
Length = 252
Score = 143 bits (359), Expect = 4e-33
Identities = 21/175 (12%), Positives = 51/175 (29%), Gaps = 26/175 (14%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQ---- 125
I + AHPDDE + ++ + + +++ L+ + G + E+ +
Sbjct: 2 RIMAVFAHPDDE-IGCIGTLAKHARRG--DEVLLVWTTLGELASQFGDTEHEEVRRIRRE 58
Query: 126 ----SSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLIT 181
+ +G + D D + + + + +P +IT
Sbjct: 59 HGAWVADKIGA-KYHFFDMGDSRMTGGRDEAL------------QLARLYATFRPHAVIT 105
Query: 182 FDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSS 236
+ HP+H + R + + D++
Sbjct: 106 WS--DDHPHPDHRMTAKIAFDAVTLARIPKILNEAGTSAAALSPAPDLGGDAAPE 158
>emb|CAA77139.1| (Y18353) hypothetical protein [Thermus thermophilus]
Length = 227
Score = 143 bits (359), Expect = 4e-33
Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 17/149 (11%)
Query: 71 ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK-SMDEIRQSELIQSSRI 129
+ + HPDD + ++ K + ++ ++G E R+ E+ ++SRI
Sbjct: 4 LLVVAPHPDDGELGCGGTLARAKAEGLSTG--ILDLTRGEMGSKGTPEEREKEVAEASRI 61
Query: 130 LGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSN 189
LG+D L + DG + + +P V+ F
Sbjct: 62 LGLDFRGNLGFPDGGLADVPEQRL------------KLAQALRRLRPRVV--FAPLEADR 107
Query: 190 HPNHISLFHGTKKYIQELRRKSENKNKTR 218
HP+H + + +
Sbjct: 108 HPDHTAASRLAVAAVHLAGLRKAPLEGEP 136
>ref|NP_389828.1| (NC_000964) Uncharacterized conserved protein [Bacillus subtilis]
Length = 221
Score = 142 bits (357), Expect = 7e-33
Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 30/192 (15%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDE-----------I 118
++ I+ HPDDE A I K + + C + G ++M + +
Sbjct: 4 HVLVILPHPDDESYGVAGLIA--LNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPLL 61
Query: 119 RQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSV 178
R+ ELI + + + I+ + +L +D E + + E + KPS+
Sbjct: 62 RKQELINACKEMDINDLRMLGLRDKTLEFEDDEYLADIMEE----------IIDDVKPSL 111
Query: 179 LITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINY------IDID 232
++TF G HP+H + + + +++ + T +DI
Sbjct: 112 IVTF-YPGHGVHPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVLGEADVVLDIK 170
Query: 233 SSSSTKFYVLKS 244
+ K L++
Sbjct: 171 EVADIKMNALRA 182
>ref|NP_242548.1| (NC_002570) BH1682~unknown conserved protein [Bacillus halodurans]
dbj|BAB05401.1| (AP001512) BH1682~unknown conserved protein [Bacillus halodurans]
Length = 231
Score = 142 bits (355), Expect = 1e-32
Identities = 34/190 (17%), Positives = 65/190 (33%), Gaps = 26/190 (13%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKS-MDEIRQSELIQ 125
+ +I AHPDD + ++ ++ + ++ + +K + E RQ E
Sbjct: 2 SKLDILAFGAHPDDVEIGMGATLYHYRQKGH--RVGICNLTKAELSSNGTVEQRQKEAAD 59
Query: 126 SSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQ 185
+SRILGID+ LD D + + N+ + +P+ + F
Sbjct: 60 ASRILGIDERIQLDLPDRGL-----RNPSEQQVRNI------VSVIRHCQPTFV--FVPY 106
Query: 186 GVSNHPNHISLFHGTKKYIQELRRKSENKNKT----------RIKTTTTTINYIDIDSSS 235
V HP+H K+ + R ++ I + +D+
Sbjct: 107 PVDRHPDHGHCAELVKEAVFNARIRNYKAEGGAHHVQDLFYYMINSFERPDLLVDVSHCY 166
Query: 236 STKFYVLKSL 245
K L +
Sbjct: 167 EVKQAALNAY 176
>ref|NP_437291.1| (NC_003078) conserved hypothetical protein, possibly
membrane-associated [Sinorhizobium meliloti]
emb|CAC49151.1| (AL603644) conserved hypothetical protein, possibly
membrane-associated [Sinorhizobium meliloti]
Length = 228
Score = 138 bits (345), Expect = 2e-31
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 29/193 (15%)
Query: 66 ITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQS---E 122
I+ + HPDDEV+ +I L ++ + ++G E E
Sbjct: 6 ISFGRTLVVAPHPDDEVLGAGGTIARLAAEGE--EVFVAVVTEGKPPAFDPEATARIQAE 63
Query: 123 LIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITF 182
Q+ R LG+ + L + +L E + S P ++
Sbjct: 64 ARQAHRALGVTETIWLRLPAAQLAETAHATVNAALLELVHRLS----------PQTVLL- 112
Query: 183 DDQGVSNHPNHISLFHGTKKYIQELRRK------------SENKNKTRIKTTTTTINYID 230
H +H F + + + N N + ++D
Sbjct: 113 -PFVGDMHMDHQLTFTSALVACRPHQAEFPKLVLAYETLSETNWNAPYLSPAFVPNVFVD 171
Query: 231 IDSSSSTKFYVLK 243
I K ++
Sbjct: 172 ISEHLEAKLKAME 184
>ref|NP_127219.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||C75001 hypothetical protein PAB1341 - Pyrococcus abyssi (strain Orsay)
emb|CAB50449.1| (AJ248288) hypothetical protein [Pyrococcus abyssi]
Length = 267
Score = 138 bits (345), Expect = 2e-31
Identities = 32/227 (14%), Positives = 68/227 (29%), Gaps = 37/227 (16%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK--------SMDEI 118
+ I HPDD V+ +I +L + ++ C + G + I
Sbjct: 30 DVEKVLCIEPHPDDCVIGMGGTIKKLTERG--IEVIYACMTDGYMGTLDSSLTGHELATI 87
Query: 119 RQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSV 178
R+ E +SS++LG+ ++ L+Y+D + KP
Sbjct: 88 RRREEEESSKLLGVKKIYWLNYRDTELPY----------SREVRK--DLVRIIRKEKPDG 135
Query: 179 LITFDDQ-GVSNHPNHISLFHGTKKYIQELRRKSENK---NKTRIKTTTT---------T 225
+ D HP+H + + + + +
Sbjct: 136 VFLPDPWLPYEAHPDHRNTGFLALDAVAFSPLPNFSNVDVEIGLGPHQVSFIALYYTNKP 195
Query: 226 INYIDIDSSSSTKFYVLKSLNFFEKYSFTILGNIEILFNFISLLIKK 272
++DI K +++ ++ + E ++L K
Sbjct: 196 NYFVDITDVMELKLKAIRTHK--SQFPDDVWEVWEPFLRTVALFYGK 240
>ref|NP_142471.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||F71162 hypothetical protein PH0499 - Pyrococcus horikoshii
dbj|BAA29587.1| (AP000002) 272aa long hypothetical protein [Pyrococcus horikoshii]
Length = 272
Score = 137 bits (343), Expect = 2e-31
Identities = 37/239 (15%), Positives = 75/239 (30%), Gaps = 40/239 (16%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKS--------MDEI 118
+ I HPDD V+ +I +L ++ +C + G + + I
Sbjct: 34 DAKKVLCIEPHPDDCVIGMGGTIKKLSDMG--VEVIYVCMTDGYMGTTDESLSGHELAAI 91
Query: 119 RQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSV 178
R+ E +S+R+LG+ ++ L+Y+D + + +P
Sbjct: 92 RRKEEEESARLLGVKKIYWLNYRDTELPY----------SREVRK--DLTKILRKEQPDG 139
Query: 179 LITFDDQ-GVSNHPNHISLFHGTKKYIQELRRKSE----------NKNKTRIKT---TTT 224
+ D +HP+H + + + + N T
Sbjct: 140 VFAPDPWLPYESHPDHRRTGFLAIESVAFSQLPNFSNTDLDIGLNPYNSGSFIALYYTHK 199
Query: 225 TINYIDIDSSSSTKFYVLKSLNFFE-KYSFTILGNIEILFNFISLLIKKFINININVSF 282
+DI K LK++ ++ I E I++ + I + F
Sbjct: 200 PNYIVDITDLMELK---LKAIRVHRSQFPDDIWEKWEPFLRTIAMFYGEKIGVRYGEGF 255
>gb|AAL80478.1| (AE010159) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 267
Score = 136 bits (341), Expect = 5e-31
Identities = 30/186 (16%), Positives = 58/186 (31%), Gaps = 36/186 (19%)
Query: 67 TNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKS--------MDEI 118
+ I HPDD + +I +L ++ IC + G + + I
Sbjct: 30 DAKKVICIEPHPDDCAIGMGGTIKKLSDEG--VEVIYICMTDGYMGTTDEKLSGHELALI 87
Query: 119 RQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSV 178
R+ E +S+++LG+ ++ L+Y+D + KP
Sbjct: 88 RRREEEESAKLLGVRKIYWLNYRDTELPY----------SREVRK--DLVKIIRKEKPDG 135
Query: 179 LITFDDQ-GVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSS- 236
+ D +HP+H + + + + + IDI
Sbjct: 136 VFAPDPWLPYESHPDHRRTGFLAIESVAFSQLPNF------------SNIDIDIGLKPHS 183
Query: 237 TKFYVL 242
F L
Sbjct: 184 VSFIAL 189
>ref|NP_334747.1| (NC_002755) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
gb|AAK44561.1| (AE006940) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
Length = 223
Score = 136 bits (341), Expect = 5e-31
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 61 NSINIITNSN-ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI------K 113
NS N + ++ + + AHPDDE + + ++ +CF+ G +
Sbjct: 2 NSCNRLPCAHEVLAVFAHPDDESFGLGAVLGDFTAQG--TRLRGLCFTHGEASTLGRTDR 59
Query: 114 SMDEIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSN 173
++ E+R+ EL ++++LG+D V +L Y D LN++ Q + + L+
Sbjct: 60 NLGEVRREELAAAAQVLGVDHVQLLAYPDNGLAQIPLNELTQRVVDALAGA--------- 110
Query: 174 NKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENK 214
+L+ FDD GV+ HP+H
Sbjct: 111 ---DLLLVFDDNGVTGHPDHRRATEAALAAASTPGIPVLAW 148
>gb|AAC14880.1| (AF060080) hypothetical protein [Chlorobium tepidum]
Length = 240
Score = 136 bits (340), Expect = 6e-31
Identities = 19/160 (11%), Positives = 44/160 (26%), Gaps = 18/160 (11%)
Query: 72 TYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK-SMDEIRQSELIQSSRIL 130
AHPDD + +++++ + + + G E R+ E ++ +
Sbjct: 13 LAFGAHPDDVELACGATLLKIMDEGK--PVAVCDLTAGEMGTLGTAETRRQEAALATERM 70
Query: 131 GIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNH 190
G LD D + +P + F + H
Sbjct: 71 GYVAREQLDLGDSELFYTK------------ESLHKIIRIIRKYRPDTV--FCNPPDERH 116
Query: 191 PNHISLFHGTKKYIQELRRKS-ENKNKTRIKTTTTTINYI 229
P+H+ + + E + + + +
Sbjct: 117 PDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLL 156
>ref|NP_214837.1| (NC_000962) hypothetical protein Rv0323c [Mycobacterium
tuberculosis H37Rv]
pir||D70526 hypothetical protein Rv0323c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB09612.1| (Z96800) hypothetical protein Rv0323c [Mycobacterium tuberculosis
H37Rv]
Length = 223
Score = 135 bits (339), Expect = 8e-31
Identities = 36/142 (25%), Positives = 67/142 (46%), Gaps = 21/142 (14%)
Query: 61 NSINIITNSN-ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI------K 113
NS N + ++ + + AHPDDE + + ++ +CF+ G +
Sbjct: 2 NSCNRLPCAHEVLAVFAHPDDESFGLGAVLGDFTAQG--TRLRGLCFTHGEASTLGRTDR 59
Query: 114 SMDEIRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSN 173
++ E+R+ EL ++++LG+D V +L Y D LN++ Q + + L+
Sbjct: 60 NLGEVRREELAAAAQVLGVDHVQLLAYPDNGLAQIPLNELTQRVVDALAGA--------- 110
Query: 174 NKPSVLITFDDQGVSNHPNHIS 195
+L+ FDD GV+ HP+H
Sbjct: 111 ---DLLLVFDDNGVTGHPDHRR 129
>gb|AAG12428.1| (AY005138) unknown [Chlorobium tepidum]
Length = 250
Score = 135 bits (339), Expect = 8e-31
Identities = 19/160 (11%), Positives = 44/160 (26%), Gaps = 18/160 (11%)
Query: 72 TYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK-SMDEIRQSELIQSSRIL 130
AHPDD + +++++ + + + G E R+ E ++ +
Sbjct: 13 LAFGAHPDDVELACGATLLKIMDEGK--PVAVCDLTAGEMGTLGTAETRRQEAALATERM 70
Query: 131 GIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNH 190
G LD D + +P + F + H
Sbjct: 71 GYVAREQLDLGDSELFYTK------------ESLHKIIRIIRKYRPDTV--FCNPPDERH 116
Query: 191 PNHISLFHGTKKYIQELRRKS-ENKNKTRIKTTTTTINYI 229
P+H+ + + E + + + +
Sbjct: 117 PDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLL 156
>emb|CAB66204.1| (AL136502) hypothetical protein SCF43.15c. [Streptomyces coelicolor
A3(2)]
Length = 247
Score = 132 bits (331), Expect = 6e-30
Identities = 33/189 (17%), Positives = 72/189 (37%), Gaps = 36/189 (19%)
Query: 69 SNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI-KSM-----DEIRQSE 122
++AHPDD A +I ++ + ++G ++ +R+ E
Sbjct: 17 RRALAVVAHPDDLEYGCAAAIAAWTDEGR--EVAYVLATRGEAGIDTLAPAECAPLRERE 74
Query: 123 LIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITF 182
S+ ++G+ +V LD++DG+ E +L +++ ++P ++IT
Sbjct: 75 QRASAAVVGVSEVEFLDHRDGVVEYG------TALRRDIAAA------IRRHRPELVITM 122
Query: 183 ---DDQGV--SNHPNHISLFHGTKKYIQELR----------RKSENKNKTR-IKTTTTTI 226
D G N P+H+++ T + R E N R + ++
Sbjct: 123 NHRDTWGGVAWNTPDHVAVGRATLDAAADAGNRWIFPELTDRGLEPWNGVRWVAVAGSSS 182
Query: 227 NYIDIDSSS 235
+D++
Sbjct: 183 PTHAVDATP 191
>ref|NP_376770.1| (NC_003106) 221aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB65879.1| (AP000984) 221aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 221
Score = 132 bits (331), Expect = 7e-30
Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 31/185 (16%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKG--------NYIKSMDEIRQS 121
I +I HPDDE ++ +L K +++I ++ + G + + EIR+
Sbjct: 2 RILFISPHPDDECDNAGGTLAKLAK---SHEIYIVYMTDGSAGSPNPEERGEKLAEIRRK 58
Query: 122 ELIQSSRILGI--DQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVL 179
E ++ ++LGI D L+Y D + + KP+++
Sbjct: 59 EALEGLKVLGIKKDNAFFLNYPDTKLRFH-----------IREASERVAKILREIKPNII 107
Query: 180 ITFDDQGVSNHPNHISLFHGTKKYIQELRRKS-----ENKNKTRIKTTTTTINYIDIDSS 234
I + H +H S + T+ I+++ N K+ I Y+ I
Sbjct: 108 IY--PSLLDGHNDHWSGGYITRIAIRKVGITVNELSYLNWLPIPSKSVFDAIKYLLIPFH 165
Query: 235 SSTKF 239
K
Sbjct: 166 RKIKV 170
>ref|NP_296086.1| (NC_001263) Uncharacterized conserved protein [Deinococcus
radiodurans]
Length = 239
Score = 129 bits (322), Expect = 7e-29
Identities = 25/141 (17%), Positives = 50/141 (34%), Gaps = 17/141 (12%)
Query: 72 TYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI-KSMDEIRQSELIQSSRIL 130
+ HPDD + ++I L + + ++ ++G + RQ+E + ++R++
Sbjct: 18 LCLAPHPDDAEIGAGGTLIRLAQAGRA--VGILELTRGEKGTQGTPAERQAECVAAARLM 75
Query: 131 GIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNH 190
+ L DG + + +P VL+ H
Sbjct: 76 DLSWRGQLGLPDGELADTPPFA------------HALAAALRTVRPRVLVV--PHWHDRH 121
Query: 191 PNHISLFHGTKKYIQELRRKS 211
P+H +H TK+ I K
Sbjct: 122 PDHFGTYHLTKRAIHLAALKK 142
>emb|CAC36570.1| (AL590463) hypothetical protein [Streptomyces coelicolor]
emb|CAC36831.1| (AL590464) hypothetical protein [Streptomyces coelicolor]
Length = 218
Score = 128 bits (321), Expect = 1e-28
Identities = 24/173 (13%), Positives = 49/173 (27%), Gaps = 15/173 (8%)
Query: 71 ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSSRIL 130
+ ++AHPDD + I +++ C + G E+R+ E + + +L
Sbjct: 4 VLVVVAHPDDAEIAMGMRIHWYALNGATVRVH--CLTTGTPAPDGTEVRRQECLSAGELL 61
Query: 131 GIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNH 190
G+DQ + D + + + D +P ++ T H
Sbjct: 62 GVDQYTFSSIPD-----------TRFVENRGRINADLFDVFREARPDIIYTH--YPDDQH 108
Query: 191 PNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSSTKFYVLK 243
+H + + + K LK
Sbjct: 109 LDHSVTAREVTTVARREAPNLRHFRSPYSVGFEPNEFFFGTAELLEAKVRALK 161
>pir||S44952 lmbE protein - Streptomyces lincolnensis
pir||S69814 lmbE protein - Streptomyces lincolnensis
emb|CAA55751.1| (X79146) lmbE [Streptomyces lincolnensis]
Length = 270
Score = 128 bits (319), Expect = 2e-28
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 16/150 (10%)
Query: 71 ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMD-------------E 117
+ + AHPDDE ++ + L+ + G + ++
Sbjct: 5 LLTVHAHPDDEASRGGATVAHYTAQG--VRAVLVTCTDGGAGEVLNPAVTDDFTPERFVA 62
Query: 118 IRQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPS 177
+R +EL S+R LG V L Y+D + + + ++ +P
Sbjct: 63 VRSAELDASARNLGYSAVHRLGYRDSGMDGTAGGAEAFVRAPLDEAATRLARVIADERPD 122
Query: 178 VLITF-DDQGVSNHPNHISLFHGTKKYIQE 206
V+I + + HP+HI + +
Sbjct: 123 VVIGYGTNHTRDPHPDHIRANEVLTRRVDL 152
>ref|NP_344220.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK43010.1| (AE006882) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 193
Score = 123 bits (308), Expect = 3e-27
Identities = 43/199 (21%), Positives = 74/199 (36%), Gaps = 40/199 (20%)
Query: 69 SNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMD---------EIR 119
+ + HPDDE + +I K+ Y + ++ + G Y D EIR
Sbjct: 8 RRVLIVAPHPDDETLCCGGTIQIFKEKGYKISVIIV--TDGRYGSPDDKLKGSSELIEIR 65
Query: 120 QSELIQSSRILGIDQVSILDYQDGMN-ETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSV 178
+ E +++++ILGID+V L+++D E N + + L EN
Sbjct: 66 RQEALRATKILGIDEVKFLNFEDSKVSEEDAENALAEFLREND----------------- 108
Query: 179 LITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSSTK 238
+ F NHP+H ++ +K N DI +K
Sbjct: 109 -VVFSPIPFDNHPDHANIGKAVEKLYPNAYFYLIWGNTQ----VNWREVKFDIRKYKESK 163
Query: 239 FYVLKSLNFFEKYSFTILG 257
L+++N +Y I G
Sbjct: 164 ---LRAIN---QYISQIGG 176
>ref|NP_105992.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51778.1| (AP003006) hypothetical protein [Mesorhizobium loti]
Length = 229
Score = 123 bits (307), Expect = 4e-27
Identities = 29/178 (16%), Positives = 61/178 (33%), Gaps = 24/178 (13%)
Query: 71 ITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI-----KSMDEIRQSELIQ 125
I + AHPDD +F ++ ++ + G + +R+ E
Sbjct: 3 ILALGAHPDDIEIFMFGTLAVYAAQG--AELTFAVATDGAKGGKSDATVLARVRREEATA 60
Query: 126 SSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQ 185
++ +LG LD+ DG L + + + + P ++IT
Sbjct: 61 AAGLLGAAP-RFLDFPDGE------------LVADAALIGALKTLIAGTGPDLVITHAPN 107
Query: 186 GVSNHPNHISLFHGTKKYIQELRRKSENKNKTRIKTTTTTINYIDIDSSSSTKFYVLK 243
H +H +L + + + T T + +Y+DI + + K ++
Sbjct: 108 DY--HADHRALSDSVRIAA-SFAVPVLHAD-TMGGTGFSPTHYVDISAHAEIKAKAIR 161
>ref|NP_492873.1| (NM_060472) Y52B11C.1.p [Caenorhabditis elegans]
pir||T27111 hypothetical protein Y52B11C.1 - Caenorhabditis elegans
emb|CAA19544.1| (AL023846) Y52B11C.1 [Caenorhabditis elegans]
Length = 151
Score = 120 bits (299), Expect = 4e-26
Identities = 50/171 (29%), Positives = 84/171 (48%), Gaps = 28/171 (16%)
Query: 26 ILPQTLTKLTNVSIKTQTFQHYYPYTSLVNTPKNSNSINIITNSNITYIIAHPDDEVMFF 85
+LP L +T + + F S+ I +++ S I +IAHPDDE MFF
Sbjct: 1 MLPLILLIVTLLLVLLLIFAV------------RSHPIPLLSQSRILLLIAHPDDETMFF 48
Query: 86 APSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSSRILGI--DQVSILDYQDG 143
+P+I L + + ++ ++C S GN+ + +IR EL +++ LGI V LDY +
Sbjct: 49 SPTIRALLQAGH--RVFVLCISNGNF-DGLGKIRARELSRAASKLGISASDVICLDYDEF 105
Query: 144 MN-ETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNHPNH 193
+ +TW N + Q + ++ ++ +I+FD GVS H NH
Sbjct: 106 ADGDTWNRNALCQIVMRHVEVLAA----------DTVISFDSHGVSGHHNH 146
>gb|AAC01723.1| (AF040570) negative regulatorly protein [Amycolatopsis
mediterranei]
Length = 255
Score = 118 bits (293), Expect = 2e-25
Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 12/155 (7%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNY----------IKSMDEIR 119
+ AHP+D+ + + + +++ L+ ++G +++ + R
Sbjct: 3 TLVSFHAHPNDDTTTCGGVLRK--AHEDGHRVVLVLATRGELGYNPDGLLAEGETLGDRR 60
Query: 120 QSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVL 179
E ++ +LG+D++ L Y D + + + VL
Sbjct: 61 AVEARAAADVLGVDRLEFLGYTDSGMTAAADGAGTFQTADVEEAARKLAAILREERADVL 120
Query: 180 ITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENK 214
+D++G P+HI + + + +
Sbjct: 121 TVYDEKGTYGDPDHIQVHRVGTRAAELAGTAKVFQ 155
>sp|P71311|YAIS_ECOLI HYPOTHETICAL 20.5 KDA PROTEIN IN ADHC-TAUA INTERGENIC REGION
gb|AAB18087.1| (U73857) hypothetical protein [Escherichia coli]
Length = 185
Score = 117 bits (292), Expect = 2e-25
Identities = 27/143 (18%), Positives = 53/143 (36%), Gaps = 12/143 (8%)
Query: 68 NSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSS 127
I I AHPDD + S+ L + + + GN R E +
Sbjct: 16 RKGILAIGAHPDDIELGCGASLARLAQKGIYIAA--VVMTTGNSGTDGIIDRHEESRNAL 73
Query: 128 RILGIDQVSILDYQDGMNETWQLNDIVQSLHENL-SPTSSGSDTNSNNKPSVLITFDDQG 186
+ILG Q L++ D QLND++ +L + + + S + +
Sbjct: 74 KILGCHQTIHLNFADTR-AHLQLNDMISALEDIIKNQIPSDVEIMR--------VYTMHD 124
Query: 187 VSNHPNHISLFHGTKKYIQELRR 209
H +H++++ + + + +
Sbjct: 125 ADRHQDHLAVYQASMVACRTIPQ 147
>ref|NP_561406.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB80196.1| (AP003187) conserved hypothetical protein [Clostridium perfringens]
Length = 601
Score = 113 bits (281), Expect = 5e-24
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 36 NVSIKTQTFQHYYPYTSLVNTPKNSNSIN---IITNSNITYIIAHPDDEVMFFAPSIIEL 92
++ I + ++ SNSI+ + TN I I+ H DDE+ +I L
Sbjct: 15 SIIIFCIVMTLFISTANMDYGSNFSNSIDYSEMWTNKEIMVIVPHQDDEINLAGATIKRL 74
Query: 93 KKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSSRILGI--DQVSILDYQDGMNETWQL 150
N ++ + G++ K + R E +++ RILG+ + V L Y D ET +
Sbjct: 75 IDNGNNVKVVFA--TNGDF-KGLGTKRIKEAVEAVRILGVNSENVIFLGYGDRWEETKEH 131
>ref|NP_285386.1| (NC_001264) conserved hypothetical protein [Deinococcus
radiodurans]
pir||A75600 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12252.1|AE001862_78 (AE001862) conserved hypothetical protein [Deinococcus radiodurans]
Length = 350
Score = 112 bits (278), Expect = 1e-23
Identities = 23/207 (11%), Positives = 61/207 (29%), Gaps = 48/207 (23%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK---------------- 113
+ + HPDDE + ++ + + ++ + + G+ +
Sbjct: 62 RVLLLAPHPDDETLCCGGTVQQARAAG--AEVFIAWMTAGDGFEFDAALTEHVLVPRPHN 119
Query: 114 --SMDEIRQSELIQSSRILGI--DQVSILDYQDGMN----------ETWQLNDIVQSLHE 159
++ + R E +++ +LG+ D +L Y DG ++
Sbjct: 120 MRALGQTRAGEAERAAAVLGVPADHTFMLGYPDGGLFRLFTTNYATPFTAPRTQASRVYV 179
Query: 160 NLSPTS-----------SGSDTNSNNKPSVLITFDDQGVSNHPNHISLFHGTKKYIQELR 208
+ T +P V++ Q H +H +L + + + E +
Sbjct: 180 TGALTPGHAFTGRNLETDLRRVLDRVQPDVVLAPAPQDF--HADHHTLSYIALRLMGERQ 237
Query: 209 RKSENKNKTRIKTTTTTINYIDIDSSS 235
++ + +
Sbjct: 238 QEDRLRFWVVHGGVEWP---LPKGLHP 261
>emb|CAC04222.1| (AL391515) conserved hypothetical protein [Streptomyces coelicolor]
Length = 247
Score = 111 bits (276), Expect = 2e-23
Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 36/189 (19%)
Query: 69 SNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI-KSMDEIRQSEL---- 123
++AHPDD + ++ + + + ++G ++D R L
Sbjct: 17 RRALAVVAHPDDLEYGCSAAVASWVADGKD--VAYLLATRGEAGIDTLDPGRAGPLREAE 74
Query: 124 -IQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITF 182
++ +G+ V LD++DG+ E SL +++ ++P ++IT
Sbjct: 75 QRAAAAAVGVRAVEFLDHRDGVIEYGA------SLRRDIAAA------VRRHRPELVITL 122
Query: 183 ---DDQ--GVSNHPNHISLFHGTKKYI----------QELRRKSENKNKTR-IKTTTTTI 226
D G N P+H+++ + + N R + +
Sbjct: 123 NHRDTWAAGAWNTPDHVAVGRAVLDAAADAGNRWIFPELAEQGLVPWNGVRWVAVANSPT 182
Query: 227 NYIDIDSSS 235
+ +
Sbjct: 183 PSHAVSAEP 191
>ref|NP_356006.1| (NC_003063) AGR_L_453p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK88791.1| (AE008221) AGR_L_453p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 815
Score = 111 bits (276), Expect = 2e-23
Identities = 29/163 (17%), Positives = 55/163 (32%), Gaps = 26/163 (15%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKS---------MDEIRQ 120
+ + AHPDDE ++ + + + + C ++G ++ + IR
Sbjct: 47 TVMHTGAHPDDEQNG----LLAYFRTELGMRTIIACSTRGEGGQNALGPERLGALGVIRS 102
Query: 121 SELIQSSRILGIDQVSILDYQ------DGMNETWQLNDIVQSLHENLSPTSSGSDTNSNN 174
EL +++R++ D +S L + D + D
Sbjct: 103 RELEEAARVIDAD-ISWLGHGPADIIHDFG--FSKDGDQTFGRWGQNRIVERLVRAYRKE 159
Query: 175 KPSVLI-TF-DDQGVSNHPNHISLFHGTKKYIQELRRKSENKN 215
+P ++I TF D G H H ++ K I S
Sbjct: 160 RPDIVIPTFLDVPGQHGH--HRAMTRAAKSAITLAADPSAYPE 200
>ref|NP_535134.1| (NC_003305) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL45450.1| (AE009394) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 800
Score = 110 bits (275), Expect = 2e-23
Identities = 29/163 (17%), Positives = 55/163 (32%), Gaps = 26/163 (15%)
Query: 70 NITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIKS---------MDEIRQ 120
+ + AHPDDE ++ + + + + C ++G ++ + IR
Sbjct: 32 TVMHTGAHPDDEQNG----LLAYFRTELGMRTIIACSTRGEGGQNALGPERLGALGVIRS 87
Query: 121 SELIQSSRILGIDQVSILDYQ------DGMNETWQLNDIVQSLHENLSPTSSGSDTNSNN 174
EL +++R++ D +S L + D + D
Sbjct: 88 RELEEAARVIDAD-ISWLGHGPADIIHDFG--FSKDGDQTFGRWGQNRIVERLVRAYRKE 144
Query: 175 KPSVLI-TF-DDQGVSNHPNHISLFHGTKKYIQELRRKSENKN 215
+P ++I TF D G H H ++ K I S
Sbjct: 145 RPDIVIPTFLDVPGQHGH--HRAMTRAAKSAITLAADPSAYPE 185
>ref|NP_437176.1| (NC_003078) conserved hypothetical protein [Sinorhizobium meliloti]
emb|CAC49036.1| (AL603644) conserved hypothetical protein [Sinorhizobium meliloti]
Length = 292
Score = 108 bits (269), Expect = 1e-22
Identities = 21/178 (11%), Positives = 54/178 (29%), Gaps = 29/178 (16%)
Query: 66 ITNSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNY-------IKSMDEI 118
+ S++ + HPDDE + + K ++ + + G + +
Sbjct: 46 WSASSVIF-APHPDDETLGCGGVSAK--KLASGVEVRFVFVTDGAASHRRLISPEELRSR 102
Query: 119 RQSELIQSSRILGID--QVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKP 176
R+SE +++ LG V+ L + D + ++ I +++ +P
Sbjct: 103 RESEALEAVHRLGASSESVTFLRFPD-AEASHHIHAITKAI----------VPLLERWRP 151
Query: 177 SVLITFDDQGVSNHPNHISLFHGTKKYIQELRRKSENKNKT----RIKTTTTTINYID 230
+ +HI++ + ++ R +
Sbjct: 152 QSVFVT--HAKDPPSDHIAVNAAVRAALRWHGRPLTVFEYPVWYWYHWPWVRPAGDLP 207
>ref|NP_385870.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC46343.1| (AL591788) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 244
Score = 106 bits (263), Expect = 6e-22
Identities = 23/177 (12%), Positives = 48/177 (26%), Gaps = 36/177 (20%)
Query: 68 NSNITYIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYIK----------SMDE 117
+ AH D V +I + Y + ++C S G + +++
Sbjct: 3 QKTGLVVSAHSADFVWRAGGAIAAHARQGYA--VTVVCLSFGERGESAKLWKKSGMTLET 60
Query: 118 I---RQSELIQSSRILGIDQVSILDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNN 174
+ R+ E +++ LG+ + D D + D
Sbjct: 61 VKADRRREAENAAKALGVHDILFYDLGDYPIQVTP------------EAFDRLVDLYREI 108
Query: 175 KPSVLITF---DDQGVSNHPNHISLFHG--TKKYIQELR-RKSENKNKTRIKTTTTT 225
+P ++T D HP ++ + Q + S
Sbjct: 109 RPEFMLTHSRQDPYNFD-HP--MATEFAQHARVIAQAHGHKPSTPVLGAPPVYLFEP 162
>ref|NP_191372.1| (NM_115675) putative protein [Arabidopsis thaliana]
pir||T45973 hypothetical protein F9D24.40 - Arabidopsis thaliana
emb|CAB68151.1| (AL137081) putative protein [Arabidopsis thaliana]
Length = 124
Score = 95.0 bits (234), Expect = 2e-18
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 84 FFAPSIIELKKPKYNNQINLICFSKGNYIKSMDEIRQSELIQSSRILGID--QVSILDYQ 141
FF+P+I L N ++++C S GN M IR +EL ++ +L + Q+ IL++
Sbjct: 7 FFSPTINYLASNACN--LHMLCLSTGNA-DGMGSIRNNELHRACAVLKVPLQQLKILNHP 63
Query: 142 ---DGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLITFDDQGVSNHPNHISLFH 198
DG + W + + + + E ++ + +ITFD+ GVS H NH +
Sbjct: 64 NLQDGFGQLWSHDLLTEIIEEEVT----------KHDIHTIITFDNYGVSGHCNHRDVHR 113
Query: 199 GTKKYIQELRRK 210
G Y++ L
Sbjct: 114 GVL-YVRLLLIP 124
>ref|NP_285456.1| (NC_001264) hypothetical protein [Deinococcus radiodurans]
pir||G75608 hypothetical protein - Deinococcus radiodurans (strain R1)
gb|AAF12317.1|AE001862_143 (AE001862) hypothetical protein [Deinococcus radiodurans]
Length = 232
Score = 69.3 bits (168), Expect = 1e-10
Identities = 21/168 (12%), Positives = 50/168 (29%), Gaps = 27/168 (16%)
Query: 73 YIIAHPDDEVMFFAPSIIELKKPKYNNQINLICFSKGNYI---------KSMDEIRQSEL 123
+ HPDDE + + L + ++ + + G + + +R +E
Sbjct: 15 VVAPHPDDEALGCGALLAALAEAGR--EVWALLLTDGGFSHPASKAYPRPRLSAVRLAEW 72
Query: 124 IQSSRILGIDQVSI--LDYQDGMNETWQLNDIVQSLHENLSPTSSGSDTNSNNKPSVLIT 181
+ +LG+ L DG + + + + + +P ++
Sbjct: 73 REGLSVLGVPPARTVALGLPDGAL----GEHLTAAARAQVRQAFAQA------RPGTVLL 122
Query: 182 FDDQGVSNHPNHISLFHGTKKYI--QELRRKSENKNKTRIKTTTTTIN 227
HP+H + +H + + L + R
Sbjct: 123 --PWERDPHPDHRAAWHLLRGVLPSDTLALEYAVWLPERGADADWPRP 168
CPU time: 78.93 user secs. 2.41 sys. secs 81.34 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.317 0.162 0.467
Gapped
Lambda K H
0.270 0.0567 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207998622
Number of Sequences: 887402
Number of extensions: 8981998
Number of successful extensions: 35014
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 34691
Number of HSP's gapped (non-prelim): 141
length of query: 353
length of database: 277,845,442
effective HSP length: 59
effective length of query: 294
effective length of database: 225,488,724
effective search space: 66293684856
effective search space used: 66293684856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.4 bits)
S2: 74 (33.0 bits)
