Sequences with E-value BETTER than threshold (0.002) 529 e-149
263 5e-69
242 7e-63
236 6e-61
233 4e-60
231 2e-59
230 3e-59
212 8e-54
196 8e-49
196 8e-49
194 2e-48
190 3e-47
185 1e-45
182 7e-45
178 1e-43
177 3e-43
176 6e-43
173 3e-42
171 3e-41
170 3e-41
166 9e-40
165 1e-39
163 5e-39
163 5e-39
159 7e-38
155 1e-36
153 3e-36
153 4e-36
149 7e-35
148 2e-34
146 7e-34
145 1e-33
144 2e-33
144 3e-33
143 8e-33
141 2e-32
136 6e-31
134 2e-30
131 2e-29
131 2e-29
131 2e-29
123 6e-27
122 8e-27
122 9e-27
120 3e-26
120 6e-26
116 6e-25
115 1e-24
104 2e-21
100 3e-20
Alignments
>gb|AAF55732.1| (AE003728) CG4433 gene product [Drosophila melanogaster]
Length = 390
Score = 529 bits (1350), Expect = e-149
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MRFNWLSEYVASISSSIASTSPWRQLQQQVQQLVPNPQAIYCRIRSSSAEALEHVLIACA 60
MRFNWLSEYVASISSSIASTSPWRQLQQQVQQLVPNPQAIYCRIRSSSAEALEHVLIACA
Sbjct: 1 MRFNWLSEYVASISSSIASTSPWRQLQQQVQQLVPNPQAIYCRIRSSSAEALEHVLIACA 60
Query: 61 VYLLVCLGLYKLTFWLSGAGSGSGLDAHHNGNDTSNAGSGEGAELNPSSDGNRSPGGLKQ 120
VYLLVCLGLYKLTFWLSGAGSGSGLDAHHNGNDTSNAGSGEGAELNPSSDGNRSPGGLKQ
Sbjct: 61 VYLLVCLGLYKLTFWLSGAGSGSGLDAHHNGNDTSNAGSGEGAELNPSSDGNRSPGGLKQ 120
Query: 121 ALQSGIRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGE 180
ALQSGIRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGE
Sbjct: 121 ALQSGIRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGE 180
Query: 181 TTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPY 240
TTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPY
Sbjct: 181 TTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPY 240
Query: 241 VDWRPDAVASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEA 300
VDWRPDAVASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEA
Sbjct: 241 VDWRPDAVASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEA 300
Query: 301 YCKFYTLDSINVVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWL 360
YCKFYTLDSINVVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWL
Sbjct: 301 YCKFYTLDSINVVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWL 360
Query: 361 YIYFSRYMFINSMRQINLSDVELEMQIHDN 390
YIYFSRYMFINSMRQINLSDVELEMQIHDN
Sbjct: 361 YIYFSRYMFINSMRQINLSDVELEMQIHDN 390
>sp|O35790|PIGL_RAT N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
(Phosphatidylinositol-glycan biosynthesis, class L
protein) (PIG-L)
dbj|BAA20869.1| (D88364) PIG-L [Rattus norvegicus]
Length = 252
Score = 263 bits (665), Expect = 5e-69
Identities = 98/260 (37%), Positives = 138/260 (52%), Gaps = 28/260 (10%)
Query: 117 GLKQALQSGIRLRSVRLPKTACM-ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILC 175
G + S R+RS R L++ AHPDDE MFF P I L + + QV +LC
Sbjct: 17 GFLRVWNSAERMRSPEQAGLPGAGSRALVVIAHPDDEAMFFAPTILGLARLK-QQVSLLC 75
Query: 176 LSNGETTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNL 235
S+G N+ ++ ++R++EL +SC+ LGIP S +++++
Sbjct: 76 FSSG---------------------NYYNQGEIRKKELLQSCAVLGIPPSRVMIIDKREF 114
Query: 236 PDDPYVDWRPDAVASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLP 295
PDDP V W + VAS IL I + + TFD +GVS H NH A+Y A +L LP
Sbjct: 115 PDDPEVQWDTEHVASTILQHIHANATDLVVTFDAEGVSGHSNHIALYKAVRALHSGGKLP 174
Query: 296 KGEEAYCKFYTLDSINVVRKYLSILDLLCTCFMSTHW-CILNWKEAAIVRSAMMEHQSQM 354
+G C TL S+NV+RKY+ +LDL T +L KE A + AM H+SQ+
Sbjct: 175 EG----CSVLTLQSVNVLRKYVFLLDLPWTLLSPQGVLFVLTSKEVAQAKKAMSCHRSQL 230
Query: 355 RWFRWLYIYFSRYMFINSMR 374
WFR LY FSRYM +NS++
Sbjct: 231 LWFRHLYTVFSRYMSVNSLQ 250
>ref|NP_004269.1| (NM_004278) phosphatidylinositol glycan, class L [Homo sapiens]
sp|Q9Y2B2|PIGL_HUMAN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
(Phosphatidylinositol-glycan biosynthesis, class L
protein) (PIG-L)
dbj|BAA74775.1| (AB017165) PIG-L [Homo sapiens]
Length = 252
Score = 242 bits (613), Expect = 7e-63
Identities = 101/259 (38%), Positives = 140/259 (53%), Gaps = 28/259 (10%)
Query: 117 GLKQALQSGIRLRSVRLPKTACME-RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILC 175
G S R++S E R LL+ AHPDDE MFF P + L + + VY+LC
Sbjct: 17 GFLWVWDSSERMKSREQGGRLGAESRTLLVIAHPDDEAMFFAPTVLGLARLR-HWVYLLC 75
Query: 176 LSNGETTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNL 235
S G N+ ++ + R++EL +SC LGIP S++++++ +
Sbjct: 76 FSAG---------------------NYYNQGETRKKELLQSCDVLGIPLSSVMIIDNRDF 114
Query: 236 PDDPYVDWRPDAVASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLP 295
PDDP + W + VA ++L IE I + TFD GVS H NH A+Y A +L LP
Sbjct: 115 PDDPGMQWDTEHVARVLLQHIEVNGINLVVTFDAGGVSGHSNHIALYAAVRALHSEGKLP 174
Query: 296 KGEEAYCKFYTLDSINVVRKYLSILDLLCTCFMSTHW-CILNWKEAAIVRSAMMEHQSQM 354
KG C TL S+NV+RKY+S+LDL + + +LN KE A + AM H+SQ+
Sbjct: 175 KG----CSVLTLQSVNVLRKYISLLDLPLSLLHTQDVLFVLNSKEVAQAKKAMSCHRSQL 230
Query: 355 RWFRWLYIYFSRYMFINSM 373
WFR LYI FSRYM INS+
Sbjct: 231 LWFRRLYIIFSRYMRINSL 249
>ref|NP_127219.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||C75001 hypothetical protein PAB1341 - Pyrococcus abyssi (strain Orsay)
emb|CAB50449.1| (AJ248288) hypothetical protein [Pyrococcus abyssi]
Length = 267
Score = 236 bits (596), Expect = 6e-61
Identities = 45/245 (18%), Positives = 80/245 (32%), Gaps = 34/245 (13%)
Query: 126 IRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSD 185
L +E+VL I HPDD + G I LT +G +V C+++G + D
Sbjct: 18 EVLEFDLNDPFKDVEKVLCIEPHPDDCVIGMGGTIKKLT-ERGIEVIYACMTDGYMGTLD 76
Query: 186 IIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRP 245
A +RR+E S LG+ + + T LP V
Sbjct: 77 SSLTGH------------ELATIRRREEEESSKLLGVKKIYWLNYRDTELPYSREVRKD- 123
Query: 246 DAVASLILHTIESLDIQAIFTFDRD-GVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKF 304
++ I +F D +HP+H + A + LP
Sbjct: 124 ------LVRIIRKEKPDGVFLPDPWLPYEAHPDHRNTGFLALDAVAFSPLPN-------- 169
Query: 305 YTLDSINVVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM---RWFRWLY 361
++ + + + + ++ + + A+ H+SQ W ++
Sbjct: 170 FSNVDVEIGLGPHQVSFIALYYTNKPNYFVDITDVMELKLKAIRTHKSQFPDDVWE--VW 227
Query: 362 IYFSR 366
F R
Sbjct: 228 EPFLR 232
>gb|AAL80478.1| (AE010159) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 267
Score = 233 bits (589), Expect = 4e-60
Identities = 46/245 (18%), Positives = 82/245 (32%), Gaps = 34/245 (13%)
Query: 126 IRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSD 185
L ++V+ I HPDD + G I L+ G +V +C+++G ++D
Sbjct: 18 EVLEFNLENPFEDAKKVICIEPHPDDCAIGMGGTIKKLSDE-GVEVIYICMTDGYMGTTD 76
Query: 186 IIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRP 245
A +RR+E S LG+ + + T LP V
Sbjct: 77 EKLSGH------------ELALIRRREEEESAKLLGVRKIYWLNYRDTELPYSREVRKD- 123
Query: 246 DAVASLILHTIESLDIQAIFTFDRD-GVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKF 304
++ I +F D SHP+H + A + LP
Sbjct: 124 ------LVKIIRKEKPDGVFAPDPWLPYESHPDHRRTGFLAIESVAFSQLPN-------- 169
Query: 305 YTLDSINVVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM---RWFRWLY 361
++ I++ K S+ + ++ + + A+ H+SQ W +
Sbjct: 170 FSNIDIDIGLKPHSVSFIALYYTHKPNYIVDITDLMELKLKAIRAHRSQFTDDIWET--W 227
Query: 362 IYFSR 366
F R
Sbjct: 228 EPFLR 232
>sp|Q9HDW9|PIGL_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
emb|CAC21467.1| (AL512549) putative N-acetylglucosaminyl phosphatidylinositol
deacetylase [Schizosaccharomyces pombe]
Length = 248
Score = 231 bits (583), Expect = 2e-59
Identities = 84/254 (33%), Positives = 122/254 (47%), Gaps = 35/254 (13%)
Query: 129 RSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIP 188
S + +E +L + AHPDDE MFFGP I L + +V++LCLSNG
Sbjct: 21 ESSSGQEKLAVESILFVFAHPDDESMFFGPTIDYLGNQHSTRVHVLCLSNG--------- 71
Query: 189 KPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAV 248
N + VR +EL + SK I ++N+ +++ L D W P V
Sbjct: 72 ------------NADGLGSVREKELVVAASKYQIDKTNVHVVSDPQLQDGMQAKWDPTDV 119
Query: 249 ASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLD 308
A I IE +I+ + TFD G+S HPNH A Y A + A + + L+
Sbjct: 120 AKHISQIIERYNIKTLITFDNKGISGHPNHIACYEGAMKIVKATPQ-------VQVFVLE 172
Query: 309 SINVVRKYLSILDLLCTCFMS------THWCILNWKEAAIVRSAM-MEHQSQMRWFRWLY 361
S+N+ RKY+S LD + T S T + K +R AM H+SQM WFR+ +
Sbjct: 173 SVNIFRKYISYLDTIPTLVQSQAGRNDTIIIHADRKSTQRIRDAMVRGHKSQMVWFRYGW 232
Query: 362 IYFSRYMFINSMRQ 375
IY S+YM N +++
Sbjct: 233 IYLSKYMSNNVLKR 246
>ref|NP_142471.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||F71162 hypothetical protein PH0499 - Pyrococcus horikoshii
dbj|BAA29587.1| (AP000002) 272aa long hypothetical protein [Pyrococcus horikoshii]
Length = 272
Score = 230 bits (582), Expect = 3e-59
Identities = 45/247 (18%), Positives = 80/247 (32%), Gaps = 35/247 (14%)
Query: 125 GIRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSS 184
L ++VL I HPDD + G I L G +V +C+++G ++
Sbjct: 21 REVLEFDLQNPFKDAKKVLCIEPHPDDCVIGMGGTIKKL-SDMGVEVIYVCMTDGYMGTT 79
Query: 185 DIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWR 244
D A +RR+E S LG+ + + T LP V
Sbjct: 80 DESLSGH------------ELAAIRRKEEEESARLLGVKKIYWLNYRDTELPYSREVRKD 127
Query: 245 PDAVASLILHTIESLDIQAIFTFDRD-GVSSHPNHCAVYYAAASLCLANLLPKGEEAYCK 303
+ + +F D SHP+H + A + LP
Sbjct: 128 LTKI-------LRKEQPDGVFAPDPWLPYESHPDHRRTGFLAIESVAFSQLPN------- 173
Query: 304 FYTLDSINVVR-KYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMR---WFRW 359
++ +++ Y S + ++ + + A+ H+SQ W +
Sbjct: 174 -FSNTDLDIGLNPYNSGSFIALYYTHKPNYIVDITDLMELKLKAIRVHRSQFPDDIWEK- 231
Query: 360 LYIYFSR 366
+ F R
Sbjct: 232 -WEPFLR 237
>ref|NP_014008.1| (NC_001145) N-acetylglucosaminylphosphatidylinositol
de-N-acetylase; Gpi12p [Saccharomyces cerevisiae]
sp|P23797|GP12_YEAST N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
pir||S54588 probable membrane protein YMR281w - yeast (Saccharomyces
cerevisiae)
emb|CAA89779.1| (Z49704) unknown [Saccharomyces cerevisiae]
dbj|BAA74776.1| (AB017166) GPI12 [Saccharomyces cerevisiae]
Length = 304
Score = 212 bits (536), Expect = 8e-54
Identities = 70/277 (25%), Positives = 108/277 (38%), Gaps = 55/277 (19%)
Query: 131 VRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKP 190
P + L+ AHPDDE MFF P+I L + P+
Sbjct: 46 HIFPHKYGDYEINLVIAHPDDEVMFFSPIISQL--------------------NSYFPRT 85
Query: 191 -PIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVA 249
P ++ L++ N E + R +EL S + L + V + + D W D++
Sbjct: 86 VPFNIICLSKGNAEGLGETRVRELNESAALL-LHNERAVSVQVMDFQDGMDEIWDIDSIT 144
Query: 250 SLILHTI----ESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEE----AY 301
S + I +L+ Q I TFD GVS+H NH + Y A L PK + +
Sbjct: 145 SSLSQKIDIKNHNLN-QIIVTFDSYGVSNHINHKSCYAAVKKLVDDYAQPKTKRNEQPPH 203
Query: 302 CKFYTLDS--INVVRKYLSIL--------DL------------LCTCFMSTHWCILNWKE 339
L S N+V KY S + DL T ++N
Sbjct: 204 VTALYLRSYKNNIVLKYNSFIWEILKILYDLISPFRRIIQALPPNTAAEKDKLSLMNTHA 263
Query: 340 AAIVRSA--MMEHQSQMRWFRWLYIYFSRYMFINSMR 374
++ A + H+SQ+ WFR+ + FSR++F+N
Sbjct: 264 QYVLAFATMLNAHESQVVWFRYGWWIFSRFVFVNEFD 300
>ref|NP_302050.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
emb|CAC30445.1| (AL583922) conserved hypothetical protein [Mycobacterium leprae]
Length = 308
Score = 196 bits (493), Expect = 8e-49
Identities = 44/254 (17%), Positives = 74/254 (28%), Gaps = 45/254 (17%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R+L + AHPDDE + G I T R G QV ++ + GE L
Sbjct: 6 RLLFVHAHPDDESLSNGATIAHYTSR-GAQVQVVTCTLGEEGEVIGD-----RWAELTVD 59
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDP----------YVDWRPDAVAS 250
+ + R EL + LG+ + ++D +
Sbjct: 60 HADQLGGYRIFELTEALRALGVSAPIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVG 119
Query: 251 LILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAAS--------------LCLANLLP- 295
++ I L + T+D G HP+H ++ A+ P
Sbjct: 120 ALVAIIRELRPHVVVTYDPHGGYGHPDHVHTHFITAAAVASSGVAAGLEVGADEYPGKPW 179
Query: 296 KGEEAYCKFYTLDSINVVRKYLSILDLLCTCFMSTH--------------WCILNWKEAA 341
K + Y + L + L DL + A
Sbjct: 180 KVPKFYWSVFALSAFEAGMNALQGKDLRPEWTIPPREEFYFGYSDKDIDAVVEATSDVWA 239
Query: 342 IVRSAMMEHQSQMR 355
+A+ H +Q+
Sbjct: 240 AKTAALTAHATQVV 253
>emb|CAC18708.2| (AL451182) conserved hypothetical protein [Streptomyces coelicolor]
Length = 293
Score = 196 bits (493), Expect = 8e-49
Identities = 51/256 (19%), Positives = 84/256 (31%), Gaps = 45/256 (17%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R++ + AHPDDE + G V ++ + GE S I P + +A E
Sbjct: 6 RLMAVHAHPDDESSKGAATMAKYVSE-GVDVLVVTCTGGERGS---ILNPKLQGDAYIEE 61
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNA--------TNLPDDPYVDWRPDAVASLI 252
N +VRR+E+ + LG+ + + +++ LP+ + D A +
Sbjct: 62 NIH---EVRRKEMDEAREILGVGQEWLGFVDSGLPEGDPLPPLPEGCFALEDVDKAAGEL 118
Query: 253 LHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEA--------YCKF 304
+ I S Q I T+D +G HP+H + + K
Sbjct: 119 VRKIRSFRPQVITTYDENGGYPHPDHIMTHKITMVAFEGAADTEKYPESEYGTAYQPLKV 178
Query: 305 YTLDSINVVRKYLSILDLLCTCFMST------------------HWCILNWKEAAIVRSA 346
Y N R LL S + I A
Sbjct: 179 YYNQGFNRPRTEALHHALLDRGLESPYEDWLKRWSEFERKERTLTTHVPCADFFEIRDKA 238
Query: 347 MMEHQSQMR----WFR 358
++ H +Q+ WFR
Sbjct: 239 LIAHATQIDPEGGWFR 254
>ref|NP_215598.1| (NC_000962) hypothetical protein Rv1082 [Mycobacterium tuberculosis
H37Rv]
ref|NP_335555.1| (NC_002755) lmbE protein [Mycobacterium tuberculosis CDC1551]
pir||H70894 hypothetical protein Rv1082 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA17198.1| (AL021897) hypothetical protein Rv1082 [Mycobacterium tuberculosis
H37Rv]
gb|AAK45369.1| (AE006992) lmbE protein [Mycobacterium tuberculosis CDC1551]
Length = 288
Score = 194 bits (489), Expect = 2e-48
Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 52/265 (19%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R++ + AHPDDE + G +V ++ L+ GE I P +DL ++
Sbjct: 5 RLMAVHAHPDDESSKGAATLARYADE-GHRVLVVTLTGGERGE---ILNPAMDLPDVHGR 60
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNA--------TNLPDDPYVDWRPDAVASLI 252
A++RR E+ ++ LG+ + + +++ LPDD + + +
Sbjct: 61 ----IAEIRRDEMTKAAEILGVEHTWLGFVDSGLPKGDLPPPLPDDCFARVPLEVSTEAL 116
Query: 253 LHTIESLDIQAIFTFDRDGVSSHPNHCAVY----YAAASLCLANLLPKGEEA-------Y 301
+ + + T+D +G HP+H + A + P E Y
Sbjct: 117 VRVVREFRPHVMTTYDENGGYPHPDHIRCHQVSVAAYEAAGDFCRFPDAGEPWTVSKLYY 176
Query: 302 CKFYTLDSINVV------RKYLSILDLLCTCFMSTHWC--------ILNWKEAAIVRSAM 347
+ + + ++ + + H + K + A+
Sbjct: 177 VHGFLRERMQMLQDEFARHGQRGPFEQWLAYWDPDHDFLTSRVTTRVECSKYFSQRDDAL 236
Query: 348 MEHQSQMR-----------WFRWLY 361
H +Q+ W L+
Sbjct: 237 RAHATQIDPNAEFFAAPLAWQERLW 261
>ref|NP_244186.1| (NC_002570) BH3320~unknown conserved protein [Bacillus halodurans]
dbj|BAB07039.1| (AP001518) BH3320~unknown conserved protein [Bacillus halodurans]
Length = 227
Score = 190 bits (479), Expect = 3e-47
Identities = 45/217 (20%), Positives = 75/217 (33%), Gaps = 30/217 (13%)
Query: 140 ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
VL+I HPDDE I L ++QG V CL+ GE + PP
Sbjct: 5 RHVLVIFPHPDDEAFGVSGTIA-LFRKQGVPVTYACLTLGEMGRNLG--NPPFATR---- 57
Query: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESL 259
E +R++EL +S +GI + ++ + + + ++ + L
Sbjct: 58 ---ESLPDIRKKELIKSAEAMGIEDLRMLGYRDKTIEFE-----DETKLTDMVSDLMAEL 109
Query: 260 DIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLSI 319
+ I TF G S HP+H A A + Y ++ + +
Sbjct: 110 NPSLIITFYP-GYSVHPDHEATGRAVVRAVRRLEKSMRPKLYGVAFSNGHQEELGDPDIL 168
Query: 320 LDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRW 356
D+ A ++A+ H SQ W
Sbjct: 169 FDISP--------------VAEQKKAAIRAHISQTAW 191
>ref|NP_294173.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||F75517 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10027.1|AE001904_3 (AE001904) conserved hypothetical protein [Deinococcus radiodurans]
Length = 281
Score = 185 bits (465), Expect = 1e-45
Identities = 52/227 (22%), Positives = 82/227 (35%), Gaps = 26/227 (11%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
+L+I AHPDDE G + RQG +V + C + GE +
Sbjct: 13 LLVIFAHPDDEAFSVGGTLTHYA-RQGVRVVLACATRGEAGK-----------ITVPGMT 60
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATN-----LPDDPYVDWRPDAVAS--LILH 254
+ R QEL +C L I + + + DDP + + + +
Sbjct: 61 VDDLGAQREQELREACRALEIEPPVFLDYHDSGRYERTRHDDPTALMNVNPLDAEVKLRA 120
Query: 255 TIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASL-CLANLLPKGE--EAYCKFYTLDS-- 309
IE + Q I TFD G H +H ++ A + LP G Y T +
Sbjct: 121 LIEDVQPQVIVTFDPHGAYGHVDHLQMHRATVAAFFSTGHLPSGGPQRLYYTAMTHQAAA 180
Query: 310 -INVVRKYLSILDLLCTCFMSTHWCI-LNWKEAAIVRSAMMEHQSQM 354
I+ + S+ L+ ST A ++A+ H +QM
Sbjct: 181 QISRLGHDQSLDPLVYGVSDSTLAVTMDVGAYAENKKAALAAHGTQM 227
>ref|NP_371091.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373778.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB41756.1| (AP003131) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56729.1| (AP003359) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 221
Score = 182 bits (459), Expect = 7e-45
Identities = 43/218 (19%), Positives = 71/218 (31%), Gaps = 30/218 (13%)
Query: 140 ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
VL+I HPDDE + S Q +G V CL+ G+ + PP
Sbjct: 5 RHVLVIFPHPDDETFSSAGTLASYIQ-KGIPVTYACLTLGQMGRNLG--NPPFATR---- 57
Query: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESL 259
E +R +EL +C +GI + + + + +PY +I I+
Sbjct: 58 ---ESLPSIRERELEEACKVIGITDLRKMGLRDKTVEFEPYEHID-----GMIKSLIDDT 109
Query: 260 DIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLSI 319
+ I +F G + HP+H A A + ++ D+ + +
Sbjct: 110 NPSLIISFYP-GYAVHPDHEATADAVIRTVERMPKEERPRLTLVAFSNDATEALGEPDIQ 168
Query: 320 LDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRWF 357
D + A H SQ F
Sbjct: 169 ND--------------ITDFKELKIKAFEAHASQTGPF 192
>ref|NP_293807.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||G75562 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF09674.1|AE001871_6 (AE001871) conserved hypothetical protein [Deinococcus radiodurans]
Length = 237
Score = 178 bits (449), Expect = 1e-43
Identities = 42/216 (19%), Positives = 70/216 (31%), Gaps = 27/216 (12%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
++LLI HPDDE + G ++ L+ GE + + P
Sbjct: 14 KLLLIVPHPDDEVYGASGTLMEYLA-AGESCGLVTLTRGEAGRTLGLCDGP--------- 63
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLD 260
E A++R EL +G+ + L PD D+ + + +E L
Sbjct: 64 --EELARMRAVELAACLEVIGLTTTPGSLHEQHQFPDKYLKDYPFEELVETAREAMERLR 121
Query: 261 IQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFY---TLDSINVVRKYL 317
+ + TF +G + HP+H + A + LP G +Y T +R
Sbjct: 122 PETVLTFPPNGSNGHPDHMTTHRAVKAAWDR--LPAGSRPVLWYYASETPPENEELRAAW 179
Query: 318 SILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQ 353
A+ H+SQ
Sbjct: 180 L----------PPTVKRDVSALVTRKLQAIACHRSQ 205
>ref|NP_302547.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
gb|AAA63037.1| (U15183) lmbE gene product [Mycobacterium leprae]
emb|CAC31907.1| (AL583925) conserved hypothetical protein [Mycobacterium leprae]
Length = 290
Score = 177 bits (445), Expect = 3e-43
Identities = 43/265 (16%), Positives = 88/265 (32%), Gaps = 52/265 (19%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R++ + AHPDDE + G +V ++ L+ GE I P +DL ++
Sbjct: 5 RLMAVHAHPDDESSKGAATLARYADE-GHRVLVVTLTGGERGE---ILNPAMDLPDVHGH 60
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNA--------TNLPDDPYVDWRPDAVASLI 252
A++RR E+ ++ LG+ + + +++ LPDD + + +
Sbjct: 61 ----IAEIRRDEMAKAAEILGVEHTWLGFIDSGLPKGDPPPPLPDDCFALVPLEVCTEAL 116
Query: 253 LHTIESLDIQAIFTFDRDGVSSHPNHCAVYY----AAASLCLANLLPKGEEA-------Y 301
+ + + T+D +G HP+H + A + C P + Y
Sbjct: 117 VRVVRKFRPHVLTTYDENGGYPHPDHIRCHQVSVDAYEAACDYRRFPDAGKPWTVSKLYY 176
Query: 302 CKFYTLDSINVVRKYL------SILDLLCTCFMSTH--------WCILNWKEAAIVRSAM 347
+ + ++ D H + + A+
Sbjct: 177 NHGFLRARMQLLHDEFAKHGQAGPFDKWLAQSNPAHDPFESRVTTRVECSAYFSQRDDAL 236
Query: 348 MEHQSQMR-----------WFRWLY 361
H +Q+ W + L+
Sbjct: 237 RAHATQIDPKAEFFAAPISWQQRLW 261
>emb|CAC16965.1| (AL450350) conserved hypothetical protein [Streptomyces coelicolor]
Length = 277
Score = 176 bits (443), Expect = 6e-43
Identities = 35/234 (14%), Positives = 67/234 (27%), Gaps = 30/234 (12%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
++ + AHPDDE G ++ G + ++ ++G KP +
Sbjct: 8 LMAVHAHPDDEATSTGGVLARYAAE-GIRTVLVTCTDGGCGDGPGGVKPGDP-----GHD 61
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATNL-----PDDPYVDW--RPDAVASLILH 254
A +RR+EL S L I + + + + D P W + A+ +
Sbjct: 62 PAAVALMRRRELEESRDILKISDLETLDYADSGMMGWPSNDAPGSFWRTPVEEGAARLAE 121
Query: 255 TIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVR 314
+ + T+D +G HP+H + + L + Y +
Sbjct: 122 LMRHYRPDVVVTYDENGFYGHPDHIQAHRITMAALEMTTL--TPKVYWTTAPRSMMQRFG 179
Query: 315 ------KYLSILDLLCTCF---------MSTHWCILNWKEAAIVRSAMMEHQSQ 353
+ + A+ H SQ
Sbjct: 180 EIMREFHPDMPEPDPAEAAAMAEIGLPDEEITTWVDTTSFSGQKFDALAAHASQ 233
>ref|NP_389828.1| (NC_000964) Uncharacterized conserved protein [Bacillus subtilis]
Length = 221
Score = 173 bits (436), Expect = 3e-42
Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 32/216 (14%)
Query: 140 ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
E VL+I HPDDE LI L +++ V C + GE + P
Sbjct: 3 EHVLVILPHPDDESYGVAGLIA-LNRKKDIPVTYACATLGEMGRNMGDP---------FF 52
Query: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESL 259
+N E +R+QEL +C ++ I + ++ + L + + +A ++ I+ +
Sbjct: 53 ANRETLPLLRKQELINACKEMDINDLRMLGLRDKTLEFE-----DDEYLADIMEEIIDDV 107
Query: 260 DIQAIFTFDR-DGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLS 318
I TF GV HP+H A A C T + V+ +
Sbjct: 108 KPSLIVTFYPGHGV--HPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVLGEAD- 164
Query: 319 ILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
+ + A I +A+ H++Q
Sbjct: 165 -------------VVLDIKEVADIKMNALRAHRTQT 187
>ref|NP_565647.1| (NM_128293) similar to PIG-L [Arabidopsis thaliana]
Length = 223
Score = 171 bits (429), Expect = 3e-41
Identities = 57/238 (23%), Positives = 91/238 (37%), Gaps = 54/238 (22%)
Query: 151 DECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNFEHKAKVRR 210
D+ FF P I T C ++ILC S G N + +R
Sbjct: 34 DDGKFFSPTINYFTSTA-CNLHILCFSTG---------------------NADGMGSIRD 71
Query: 211 QELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQAIFTFDRD 270
QEL R+C+ L + + + + D+ + I TFD
Sbjct: 72 QELHRACAVLKV-----IPFDKEGICDNDSCHCNEEH----------------IITFDNY 110
Query: 271 GVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLD-SINVVRKYLSILDLLCTCF-- 327
GV H NH V+ + + + + Y S+N+ RKY +D+ +
Sbjct: 111 GVWGHCNHRDVHPP-----IDCKIDSAKRIHGFLYVHQVSLNIFRKYCGPVDIWLSILSA 165
Query: 328 --MSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWLYIYFSRYMFINSMRQINLSDVEL 383
+ I+N + AM +H SQ WFR L++ FS Y ++N++ +IN EL
Sbjct: 166 KRHPSKVIIINKQPW-KSFKAMAQHLSQWVWFRKLFVLFSSYTYVNTLDRINPESNEL 222
>ref|NP_437176.1| (NC_003078) conserved hypothetical protein [Sinorhizobium meliloti]
emb|CAC49036.1| (AL603644) conserved hypothetical protein [Sinorhizobium meliloti]
Length = 292
Score = 170 bits (428), Expect = 3e-41
Identities = 43/250 (17%), Positives = 78/250 (31%), Gaps = 34/250 (13%)
Query: 118 LKQALQSGIRLRSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLS 177
L + L S +R R ++ HPDDE + G + G +V + ++
Sbjct: 26 LCRILDSRMRRRFKPFDVADWSASSVIFAPHPDDETLGCGGVSAKKLAS-GVEVRFVFVT 84
Query: 178 NGETTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPD 237
+G + +I + E R E + +LG ++ + PD
Sbjct: 85 DGAASHRRLI-------------SPEELRSRRESEALEAVHRLGASSESVTFLR---FPD 128
Query: 238 DPYVDWRPDAVASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKG 297
A+ I+ +E Q++ F +H AV A + + P
Sbjct: 129 -AEASHHIHAITKAIVPLLERWRPQSV--FVTHAKDPPSDHIAVNAAVRAALRWHGRPLT 185
Query: 298 EEAYCKFYTLDSINVVRKYLSILDLLCTCFMST-------------HWCILNWKEAAIVR 344
Y +Y VR + + T T + + + + R
Sbjct: 186 VFEYPVWYW-YHWPWVRPAGDLPGMWRTTLRQTVKTVAGLRALSALNTLVPIGEFLDVKR 244
Query: 345 SAMMEHQSQM 354
A+ H SQ
Sbjct: 245 HALAAHVSQT 254
>emb|CAC05756.1| (AL391751) hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 295
Score = 166 bits (416), Expect = 9e-40
Identities = 43/203 (21%), Positives = 71/203 (34%), Gaps = 23/203 (11%)
Query: 140 ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
R+LL+ AHPDDE + G + G V ++ + GE AL
Sbjct: 7 RRLLLVHAHPDDESINNGVTMARYAAE-GAHVTLVTCTLGERGEVI--------PPALAH 57
Query: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVL----MNATNL-----PDDPYVDWR--PDAV 248
+ RR EL + LG+ + ++ + + DDP W+ DA
Sbjct: 58 LSGAALGGHRRGELADAMRALGVDDFRLLGGPGRYADSGMLGLSDNDDPGCLWQADVDAA 117
Query: 249 ASLILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLD 308
A+L++ I + Q + T+D +G HP+H + A + K Y
Sbjct: 118 AALLVDVIREVRPQVLVTYDPNGGYGHPDHIQAHRIAMRAAELAA--EAGCPVAKVYWN- 174
Query: 309 SINVVRKYLSILDLLCTCFMSTH 331
+ R + L
Sbjct: 175 RVPRSRVEDAFARLRDDLPGLPF 197
>ref|NP_376770.1| (NC_003106) 221aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB65879.1| (AP000984) 221aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 221
Score = 165 bits (415), Expect = 1e-39
Identities = 46/222 (20%), Positives = 85/222 (37%), Gaps = 32/222 (14%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R+L I+ HPDDEC G + L + ++YI+ +++G S + E
Sbjct: 2 RILFISPHPDDECDNAGGTLAKLA--KSHEIYIVYMTDGSAGSPN------------PEE 47
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLD 260
E A++RR+E LGI + N +N + ++ + VA ++ +
Sbjct: 48 RGEKLAEIRRKEALEGLKVLGIKKDNAFFLNYPDTKLRFHIREASERVAKIL----REIK 103
Query: 261 IQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLSIL 320
I + H +H + Y + E +Y + + S +V
Sbjct: 104 PNIII--YPSLLDGHNDHWSGGYITRIAIRKVGITVNELSYLNWLPIPSKSVF------- 154
Query: 321 DLLCTCFMSTH--WCILNWKEAAIVRSAMMEHQSQMRWFRWL 360
D + + H + + I AM +H+SQ F++L
Sbjct: 155 DAIKYLLIPFHRKIKVDIREYKRIKLEAMKKHESQ---FKYL 193
>ref|NP_385870.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC46343.1| (AL591788) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 244
Score = 163 bits (410), Expect = 5e-39
Identities = 40/234 (17%), Positives = 71/234 (30%), Gaps = 46/234 (19%)
Query: 143 LLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNF 202
L+++AH D G I + RQG V ++CLS GE S + K +++
Sbjct: 7 LVVSAHSADFVWRAGGAIAAHA-RQGYAVTVVCLSFGERGESAKLWKKSGMTLETVKAD- 64
Query: 203 EHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQ 262
RR+E + LG+ + + + P ++ + +
Sbjct: 65 ------RRREAENAAKALGVHDILFYDLGDYPIQVTPEAF-------DRLVDLYREIRPE 111
Query: 263 AIFTF---DRDGVSSHPNHCAVYYAAASLCLA---NLLPKGE----EAYCKFYTLDSINV 312
+ T D HP A +A + +A P F
Sbjct: 112 FMLTHSRQDPYNFD-HP--MATEFAQHARVIAQAHGHKPSTPVLGAPPVYLFEPHQPEQC 168
Query: 313 VRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWLYIYFSR 366
K +LD +A+ + Q L+ Y++R
Sbjct: 169 NWKPNFLLD--------------ITDVWEKKLAAIKCMEGQ----EHLWEYYTR 204
>pir||S44952 lmbE protein - Streptomyces lincolnensis
pir||S69814 lmbE protein - Streptomyces lincolnensis
emb|CAA55751.1| (X79146) lmbE [Streptomyces lincolnensis]
Length = 270
Score = 163 bits (409), Expect = 5e-39
Identities = 35/235 (14%), Positives = 63/235 (25%), Gaps = 30/235 (12%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
+L + AHPDDE G + T QG + ++ ++G P +
Sbjct: 5 LLTVHAHPDDEASRGGATVAHYTA-QGVRAVLVTCTDGGAGEVL----NPAVTDDFTPER 59
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLP-----DDPYVDWRPDAVASLILHTI 256
F VR EL S LG + + + + + +V D A+ + I
Sbjct: 60 FVA---VRSAELDASARNLGYSAVHRLGYRDSGMDGTAGGAEAFVRAPLDEAATRLARVI 116
Query: 257 ESLDIQAIFTF-DRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRK 315
+ + HP+H L Y ++ + +
Sbjct: 117 ADERPDVVIGYGTNHTRDPHPDHIRANEVLTRRVDL--LDHTPAVYHIAFSRRRHRALHQ 174
Query: 316 Y--LSILDLLC--TCFMSTHWCILNW----------KEAAIVRSAMMEHQSQMRW 356
S + W A+ H +Q+
Sbjct: 175 ACVDSGVPSPYEGGLSAPPGAFDDEWITTLVDVTKGDAVERRLDALRSHVTQVPP 229
>gb|AAC01723.1| (AF040570) negative regulatorly protein [Amycolatopsis
mediterranei]
Length = 255
Score = 159 bits (399), Expect = 7e-38
Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 21/230 (9%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
++ AHP+D+ G ++ G +V ++ + GE + +
Sbjct: 4 LVSFHAHPNDDTTTCGGVL-RKAHEDGHRVVLVLATRGELGYNPDGL----------LAE 52
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLP-----DDPYVDWRPDAVASLILHTI 256
E R E + LG+ + + + + + A + +
Sbjct: 53 GETLGDRRAVEARAAADVLGVDRLEFLGYTDSGMTAAADGAGTFQTADVEEAARKLAAIL 112
Query: 257 ESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKY 316
+ +D G P+H V+ K ++ + + V
Sbjct: 113 REERADVLTVYDEKGTYGDPDHIQVHRVGTRAAELAGTAKVFQSTINREHIKANQRVLAE 172
Query: 317 LSILDLL----CTCFMSTHWC-ILNWKEAAIVRSAMMEHQSQMRWFRWLY 361
+ +DL + C + R A++ H SQ+ L+
Sbjct: 173 QAGVDLPAGPDFGTPEAELTCRVDVSAYTEYKRKALLAHASQITPQSTLF 222
>ref|NP_242548.1| (NC_002570) BH1682~unknown conserved protein [Bacillus halodurans]
dbj|BAB05401.1| (AP001512) BH1682~unknown conserved protein [Bacillus halodurans]
Length = 231
Score = 155 bits (389), Expect = 1e-36
Identities = 36/217 (16%), Positives = 70/217 (31%), Gaps = 46/217 (21%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
+L AHPDD + G +Y +++G +V I L+ E +S+
Sbjct: 6 ILAFGAHPDDVEIGMGATLYHY-RQKGHRVGICNLTKAELSSN----------------- 47
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDI 261
+ R++E + LGI E + + L + I+ I
Sbjct: 48 --GTVEQRQKEAADASRILGIDERIQLDLPDRGL------RNPSEQQVRNIVSVIRHCQP 99
Query: 262 QAIFTFDRDGVSSHPNHCAVYYAAASLC----LANLLPKGEEAYCKFYTLDSINVVRKYL 317
+ F V HP+H + N +G + + IN +
Sbjct: 100 TFV--FVPYPVDRHPDHGHCAELVKEAVFNARIRNYKAEGGAHHVQDLFYYMINSFERPD 157
Query: 318 SILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
++D+ + ++A+ ++SQ
Sbjct: 158 LLVDV--------------SHCYEVKQAALNAYKSQF 180
>ref|NP_215686.1| (NC_000962) hypothetical protein Rv1170 [Mycobacterium tuberculosis
H37Rv]
ref|NP_335650.1| (NC_002755) lmbE-related protein [Mycobacterium tuberculosis
CDC1551]
pir||B70875 hypothetical protein Rv1170 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA15847.1| (AL010186) hypothetical protein Rv1170 [Mycobacterium tuberculosis
H37Rv]
gb|AAK45464.1| (AE006998) lmbE-related protein [Mycobacterium tuberculosis
CDC1551]
Length = 303
Score = 153 bits (385), Expect = 3e-36
Identities = 41/210 (19%), Positives = 68/210 (31%), Gaps = 27/210 (12%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R+L + AHPDDE + G I T R G QV+++ + GE L
Sbjct: 6 RLLFVHAHPDDESLSNGATIAHYTSR-GAQVHVVTCTLGEEGEVIGD-----RWAQLTAD 59
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDP----------YVDWRPDAVAS 250
+ + R EL + LG+ + +VD P
Sbjct: 60 HADQLGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVG 119
Query: 251 LILHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKG-----------EE 299
++ I L + T+D +G HP+H + + A + G +
Sbjct: 120 ALVAIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAGVGSGTADHPGDPWTVPK 179
Query: 300 AYCKFYTLDSINVVRKYLSILDLLCTCFMS 329
Y L ++ + L DL +
Sbjct: 180 FYWTVLGLSALISGARALVPDDLRPEWVLP 209
>ref|NP_403747.1| (NC_003143) hypothetical protein [Yersinia pestis]
emb|CAC88949.1| (AJ414141) hypothetical protein [Yersinia pestis]
Length = 310
Score = 153 bits (385), Expect = 4e-36
Identities = 43/234 (18%), Positives = 67/234 (28%), Gaps = 47/234 (20%)
Query: 143 LLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNF 202
L+++AH D G I QG QV+I+CLS GE S + + E +++
Sbjct: 75 LVVSAHSADFVWRAGGAIALHV-EQGYQVHIVCLSYGERGESAKLWRKGDMTEERVKAS- 132
Query: 203 EHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQ 262
R E + + LG M L D + + +
Sbjct: 133 ------RHTEAQAAANVLGAS-IEFFDMGDYPLRADKESLF-------RLADVFRRIQPH 178
Query: 263 AIFTF---DRDGVSSHPNHCAVYYAAASLCLA---NLLPK----GEEAYCKFYTLDSINV 312
+ T D HP A A + +A P G F
Sbjct: 179 FVLTHSLADPYNYD-HP--LAANLAQEARIIAQAEGYRPGEAIIGAPPVYCFEPHQPEQC 235
Query: 313 VRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWLYIYFSR 366
K +LD +A+ Q L+ Y++R
Sbjct: 236 GWKPDVLLD--------------ITSVWEKKYAAIQCMAGQ----EHLWEYYTR 271
>ref|NP_344220.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK43010.1| (AE006882) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 193
Score = 149 bits (374), Expect = 7e-35
Identities = 41/222 (18%), Positives = 78/222 (34%), Gaps = 48/222 (21%)
Query: 133 LPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPI 192
+ K++CM RVL++ HPDDE + G I + + +G ++ ++ +++G S D K
Sbjct: 1 MQKSSCMRRVLIVAPHPDDETLCCGGTI-QIFKEKGYKISVIIVTDGRYGSPDDKLKGSS 59
Query: 193 DLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLI 252
++RRQE R+ LGI E + + + + + + +
Sbjct: 60 -----------ELIEIRRQEALRATKILGIDEVKFLNFEDSKVSE--------EDAENAL 100
Query: 253 LHTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINV 312
+ D F +HP+H + A L P Y + + V
Sbjct: 101 AEFLREND----VVFSPIPFDNHPDHANIGKAVEKL-----YPNAYF-YLIW---GNTQV 147
Query: 313 VRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
+ K A+ ++ SQ+
Sbjct: 148 NWRE---------------VKFDIRKYKESKLRAINQYISQI 174
>emb|CAB66204.1| (AL136502) hypothetical protein SCF43.15c. [Streptomyces coelicolor
A3(2)]
Length = 247
Score = 148 bits (371), Expect = 2e-34
Identities = 34/216 (15%), Positives = 64/216 (28%), Gaps = 30/216 (13%)
Query: 140 ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
R L + AHPDD I + T G +V + + GE + P L
Sbjct: 17 RRALAVVAHPDDLEYGCAAAIAAWTDE-GREVAYVLATRGEAGIDTLAPAECAPL----- 70
Query: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESL 259
R +E S + +G+ E + + +A+ I L
Sbjct: 71 ---------REREQRASAAVVGVSEVEFLDHRDGVVEYG---TALRRDIAAAIRRHRPEL 118
Query: 260 DIQAIFTFDRDGV--SSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYL 317
I + D G + P+H AV A + + + +
Sbjct: 119 VI-TMNHRDTWGGVAWNTPDHVAVGRATLDAAADAGNR--------WIFPELTDRGLEPW 169
Query: 318 SILD-LLCTCFMSTHWCILNWKEAAIVRSAMMEHQS 352
+ + + S + +++EH++
Sbjct: 170 NGVRWVAVAGSSSPTHAVDATPGMERAVRSLLEHRT 205
>ref|NP_334747.1| (NC_002755) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
gb|AAK44561.1| (AE006940) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
Length = 223
Score = 146 bits (366), Expect = 7e-34
Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 34/230 (14%)
Query: 134 PKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPID 193
+ C VL + AHPDDE G ++ T QG ++ LC ++GE ++
Sbjct: 5 NRLPCAHEVLAVFAHPDDESFGLGAVLGDFTA-QGTRLRGLCFTHGEASTL--------- 54
Query: 194 LEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLIL 253
+ +VRR+EL + LG+ ++ PD+ + + ++
Sbjct: 55 -----GRTDRNLGEVRREELAAAAQVLGVDHVQLLAY-----PDNGLAQIPLNELTQRVV 104
Query: 254 HTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVV 313
+ + FD +GV+ HP+H AA + +P + +
Sbjct: 105 DALA--GADLLLVFDDNGVTGHPDHRRATEAALAAASTPGIP----VLAWALPQPIADRL 158
Query: 314 RKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQ-----MRWFR 358
S ++ +A+ H +Q + W R
Sbjct: 159 NAEFSASFGGRGHGHLDIMIEVDRS---RQLAAIGCHFTQSADNPVLWRR 205
>emb|CAA77139.1| (Y18353) hypothetical protein [Thermus thermophilus]
Length = 227
Score = 145 bits (363), Expect = 1e-33
Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 39/216 (18%)
Query: 139 MERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALN 198
M +L++ HPDD + G + + +G IL L+ GE S
Sbjct: 1 MLDLLVVAPHPDDGELGCGGTLAR-AKAEGLSTGILDLTRGEMGS--------------- 44
Query: 199 ESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIES 258
+ + R +E+ + LG+ + L D P + +
Sbjct: 45 ----KGTPEEREKEVAEASRILGLDFRGNLGFPDGGLADVPEQRL-------KLAQALRR 93
Query: 259 LDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLS 318
L + + F HP+H A A + L K F + + Y
Sbjct: 94 LRPRVV--FAPLEADRHPDHTAASRLAVAAVHLAGLRKAPLEGEPF----RVERLFFYPG 147
Query: 319 ILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
+ + I W+ +A++ ++SQ
Sbjct: 148 NHPFAPSFLVKISAFIDQWE------AAVLAYRSQF 177
>ref|NP_437291.1| (NC_003078) conserved hypothetical protein, possibly
membrane-associated [Sinorhizobium meliloti]
emb|CAC49151.1| (AL603644) conserved hypothetical protein, possibly
membrane-associated [Sinorhizobium meliloti]
Length = 228
Score = 144 bits (362), Expect = 2e-33
Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 33/215 (15%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R L++ HPDDE + G I L G +V++ ++ G+ + D
Sbjct: 10 RTLVVAPHPDDEVLGAGGTIARLAAE-GEEVFVAVVTEGKPPAFD--------------- 53
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLD 260
E A++ + E ++ LG+ E+ + + A L + + V + +L + L
Sbjct: 54 -PEATARI-QAEARQAHRALGVTETIWLRLPAAQLAETAHAT-----VNAALLELVHRLS 106
Query: 261 IQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLSIL 320
Q + H +H + +A C + + + TL N YLS
Sbjct: 107 PQTVL--LPFVGDMHMDHQLTFTSALVAC-RPHQAEFPKLVLAYETLSETNWNAPYLSPA 163
Query: 321 DLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMR 355
+ + + + AM SQ+R
Sbjct: 164 FV-------PNVFVDISEHLEAKLKAMELFASQVR 191
>ref|NP_214837.1| (NC_000962) hypothetical protein Rv0323c [Mycobacterium
tuberculosis H37Rv]
pir||D70526 hypothetical protein Rv0323c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB09612.1| (Z96800) hypothetical protein Rv0323c [Mycobacterium tuberculosis
H37Rv]
Length = 223
Score = 144 bits (360), Expect = 3e-33
Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 34/230 (14%)
Query: 134 PKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPID 193
+ C VL + AHPDDE G ++ T QG ++ LC ++GE ++
Sbjct: 5 NRLPCAHEVLAVFAHPDDESFGLGAVLGDFTA-QGTRLRGLCFTHGEASTL--------- 54
Query: 194 LEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLIL 253
+ +VRR+EL + LG+ ++ PD+ + + ++
Sbjct: 55 -----GRTDRNLGEVRREELAAAAQVLGVDHVQLLAY-----PDNGLAQIPLNELTQRVV 104
Query: 254 HTIESLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVV 313
+ + FD +GV+ HP+H AA + +P + +
Sbjct: 105 DALA--GADLLLVFDDNGVTGHPDHRRATEAALAAASTPSIP----VLAWALPQPIADRL 158
Query: 314 RKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQ-----MRWFR 358
S ++ +A+ H +Q + W R
Sbjct: 159 NAEFSASFGGRGHGHLDIMIEVDRS---RQLAAIGCHFTQSADNPVLWRR 205
>ref|NP_390128.1| (NC_000964) alternate gene name: jojG~similar to hypothetical
proteins [Bacillus subtilis]
sp|P42981|YPJG_BACSU Hypothetical 24.8 kDa protein in DAPB-PAPS intergenic region
pir||F69937 conserved hypothetical protein ypjG - Bacillus subtilis
gb|AAA92876.1| (L38424) unknown [Bacillus subtilis]
gb|AAB38444.1| (L47709) putative [Bacillus subtilis]
emb|CAB14163.1| (Z99115) alternate gene name: jojG~similar to hypothetical proteins
[Bacillus subtilis]
Length = 224
Score = 143 bits (357), Expect = 8e-33
Identities = 34/221 (15%), Positives = 63/221 (28%), Gaps = 49/221 (22%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
VL AH DD + G I +++ +V I L+ E +S+
Sbjct: 6 VLAFGAHSDDVEIGMGGTIAKFVKQE-KKVMICDLTEAELSSN----------------- 47
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDI 261
+R++E + LG + + + L D I+ I
Sbjct: 48 --GTVSLRKEEAAEAARILGADKRIQLTLPDRGL-------IMSDQAIRSIVTVIRICRP 98
Query: 262 QAIFTFDRDGVSSHPNHCAVYYAAASL-----CLANLLPKGEEAY-CKFYTLDSINVVRK 315
+A+ F HP+H K A+ IN +
Sbjct: 99 KAV--FMPYKKDRHPDHGNAAALVEEAIFSAGIHKYKDEKSLPAHKVSKVYYYMINGFHQ 156
Query: 316 YLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQMRW 356
++D+ T + ++ ++SQ
Sbjct: 157 PDFVIDISDTI--------------EAKKQSLNAYKSQFIP 183
>ref|NP_296086.1| (NC_001263) Uncharacterized conserved protein [Deinococcus
radiodurans]
Length = 239
Score = 141 bits (353), Expect = 2e-32
Identities = 35/212 (16%), Positives = 63/212 (29%), Gaps = 39/212 (18%)
Query: 143 LLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNF 202
L + HPDD + G + L Q G V IL L+ GE +
Sbjct: 18 LCLAPHPDDAEIGAGGTLIRLAQ-AGRAVGILELTRGEKGT------------------- 57
Query: 203 EHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQ 262
+ R+ E + + + + + L D P A + + ++ +
Sbjct: 58 QGTPAERQAECVAAARLMDLSWRGQLGLPDGELADTP-------PFAHALAAALRTVRPR 110
Query: 263 AIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLSILDL 322
+ HP+H Y+ L K + + + V Y D+
Sbjct: 111 VLVV--PHWHDRHPDHFGTYHLTKRAIHLAALKKADLGGDPW----RVQRVLLYQGNSDI 164
Query: 323 LCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
S + + +A+ H SQ
Sbjct: 165 ------SANVLVDIGSVMTEWEAAIRAHTSQF 190
>emb|CAB67717.1| (AJ271405) hypothetical protein [Streptomyces rochei]
Length = 234
Score = 136 bits (340), Expect = 6e-31
Identities = 26/221 (11%), Positives = 65/221 (28%), Gaps = 39/221 (17%)
Query: 138 CMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEAL 197
+ VL++ HPDD+ + G + + G +V ++ + E ++ D A+
Sbjct: 3 GVTDVLVVAPHPDDDVIGCGGSMAKHVRE-GARVTVVVVIGRERSALDD---------AV 52
Query: 198 NESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIE 257
E+ F E + LG+ ++ + + ++ +
Sbjct: 53 TEAEFAA-------ETENAAKILGVHRCVRFDESSRDFAPSRRIHLD-------LVRVLR 98
Query: 258 SLDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYL 317
+ Q + + H V+ + + ++
Sbjct: 99 EVRPQVV--YLPHDNDDDVEHRMVHRLTTEAL-WMAQSE--------FFQEAGECPMPAP 147
Query: 318 SILDLLCTCFMS---THWCILNWKEAAIVRSAMMEHQSQMR 355
++ L + + + AM + SQ+R
Sbjct: 148 RLV-LGYEVWSPMARYQYAEDIGEHIHTKVEAMRAYVSQLR 187
>emb|CAC36570.1| (AL590463) hypothetical protein [Streptomyces coelicolor]
emb|CAC36831.1| (AL590464) hypothetical protein [Streptomyces coelicolor]
Length = 218
Score = 134 bits (335), Expect = 2e-30
Identities = 40/232 (17%), Positives = 64/232 (27%), Gaps = 53/232 (22%)
Query: 139 MERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALN 198
M VL++ AHPDD + G I G V + CL+ G A +
Sbjct: 1 MTSVLVVVAHPDDAEIAMGMRI-HWYALNGATVRVHCLTTG--------------TPAPD 45
Query: 199 ESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIES 258
+ +VRRQE + LG+ + + T ++ + + +
Sbjct: 46 GT------EVRRQECLSAGELLGVDQYTFSSIPDTRFVENRG------RINADLFDVFRE 93
Query: 259 LDIQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLS 318
I+T H +H A + R S
Sbjct: 94 ARPDIIYTHYP--DDQHLDH----SVTAREVTTVARREAPNLRH----------FRSPYS 137
Query: 319 ILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQ----MRWFRWLYIYFSR 366
+ F + + A+ SQ M FR L R
Sbjct: 138 V------GFEPNEFFFGTAELLEAKVRALKCFASQTQLDMDVFRQLTEVAYR 183
>sp|P71311|YAIS_ECOLI HYPOTHETICAL 20.5 KDA PROTEIN IN ADHC-TAUA INTERGENIC REGION
gb|AAB18087.1| (U73857) hypothetical protein [Escherichia coli]
Length = 185
Score = 131 bits (328), Expect = 2e-29
Identities = 35/214 (16%), Positives = 71/214 (32%), Gaps = 50/214 (23%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
+L I AHPDD + G + L Q +G + + ++ G + + II
Sbjct: 19 ILAIGAHPDDIELGCGASLARLAQ-KGIYIAAVVMTTGNSGTDGIID------------- 64
Query: 202 FEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDI 261
R +E + LG ++ + T + + + S + I++
Sbjct: 65 -------RHEESRNALKILGCHQTIHLNFADTR------AHLQLNDMISALEDIIKNQIP 111
Query: 262 ---QAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLS 318
+ + + H +H AVY A+ C G E + +
Sbjct: 112 SDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLS------------ 159
Query: 319 ILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQS 352
FM + + + + +A+ +H+S
Sbjct: 160 --------FMPQVFESVKEEYFTVKLAALKKHKS 185
>gb|AAC14880.1| (AF060080) hypothetical protein [Chlorobium tepidum]
Length = 240
Score = 131 bits (328), Expect = 2e-29
Identities = 31/223 (13%), Positives = 53/223 (22%), Gaps = 56/223 (25%)
Query: 143 LLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNF 202
L AHPDD + G + + G V + L+ GE +
Sbjct: 13 LAFGAHPDDVELACGATLLKIMDE-GKPVAVCDLTAGEMGTL------------------ 53
Query: 203 EHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQ 262
A+ RRQE + ++G + + + L I+ I
Sbjct: 54 -GTAETRRQEAALATERMGYVAREQLDLGDSELFYTKESLH-------KIIRIIRKYRPD 105
Query: 263 AIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPK-----------GEEAYCKFYTLDSIN 311
+ F HP+H C L K Y +
Sbjct: 106 TV--FCNPPDERHPDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQFKQ 163
Query: 312 VVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
+ + R+ + +Q
Sbjct: 164 ----------------LEPQIVVDVSSTFERSRAGIEAFGTQF 190
>gb|AAG12428.1| (AY005138) unknown [Chlorobium tepidum]
Length = 250
Score = 131 bits (327), Expect = 2e-29
Identities = 31/223 (13%), Positives = 53/223 (22%), Gaps = 56/223 (25%)
Query: 143 LLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNF 202
L AHPDD + G + + G V + L+ GE +
Sbjct: 13 LAFGAHPDDVELACGATLLKIMDE-GKPVAVCDLTAGEMGTL------------------ 53
Query: 203 EHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQ 262
A+ RRQE + ++G + + + L I+ I
Sbjct: 54 -GTAETRRQEAALATERMGYVAREQLDLGDSELFYTKESLH-------KIIRIIRKYRPD 105
Query: 263 AIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPK-----------GEEAYCKFYTLDSIN 311
+ F HP+H C L K Y +
Sbjct: 106 TV--FCNPPDERHPDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQFKQ 163
Query: 312 VVRKYLSILDLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQM 354
+ + R+ + +Q
Sbjct: 164 ----------------LEPQIVVDVSSTFERSRAGIEAFGTQF 190
>ref|NP_492873.1| (NM_060472) Y52B11C.1.p [Caenorhabditis elegans]
pir||T27111 hypothetical protein Y52B11C.1 - Caenorhabditis elegans
emb|CAA19544.1| (AL023846) Y52B11C.1 [Caenorhabditis elegans]
Length = 151
Score = 123 bits (307), Expect = 6e-27
Identities = 52/150 (34%), Positives = 78/150 (51%), Gaps = 25/150 (16%)
Query: 129 RSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIP 188
RS +P + R+LL+ AHPDDE MFF P I +L Q G +V++LC+SNG
Sbjct: 22 RSHPIPLLS-QSRILLLIAHPDDETMFFSPTIRALLQ-AGHRVFVLCISNG--------- 70
Query: 189 KPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAV 248
NF+ K+R +EL R+ SKLGI S+++ ++ D W +A+
Sbjct: 71 ------------NFDGLGKIRARELSRAASKLGISASDVICLDYDEFADGD--TWNRNAL 116
Query: 249 ASLILHTIESLDIQAIFTFDRDGVSSHPNH 278
+++ +E L + +FD GVS H NH
Sbjct: 117 CQIVMRHVEVLAADTVISFDSHGVSGHHNH 146
>ref|NP_535134.1| (NC_003305) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL45450.1| (AE009394) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 800
Score = 122 bits (305), Expect = 8e-27
Identities = 31/170 (18%), Positives = 50/170 (29%), Gaps = 26/170 (15%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
V+ AHPDDE L+ G + I C + GE + AL
Sbjct: 33 VMHTGAHPDDEQ---NGLLAYFRTELGMRTIIACSTRGEGGQN-----------ALGPER 78
Query: 202 FEHKAKVRRQELWRSCSKLGIP-----ESNIVLMNATNLPDDPYV---DWRPDAVASLIL 253
+R +EL + + +++ D W + + ++
Sbjct: 79 LGALGVIRSRELEEAARVIDADISWLGHGPADIIHDFGFSKDGDQTFGRWGQNRIVERLV 138
Query: 254 HTIESLDIQAIF-TF-DRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAY 301
+ TF D G H H A+ AA S P +
Sbjct: 139 RAYRKERPDIVIPTFLDVPGQHGH--HRAMTRAAKSAITLAADPSAYPEH 186
>ref|NP_356006.1| (NC_003063) AGR_L_453p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK88791.1| (AE008221) AGR_L_453p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 815
Score = 122 bits (305), Expect = 9e-27
Identities = 31/170 (18%), Positives = 50/170 (29%), Gaps = 26/170 (15%)
Query: 142 VLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESN 201
V+ AHPDDE L+ G + I C + GE + AL
Sbjct: 48 VMHTGAHPDDEQ---NGLLAYFRTELGMRTIIACSTRGEGGQN-----------ALGPER 93
Query: 202 FEHKAKVRRQELWRSCSKLGIP-----ESNIVLMNATNLPDDPYV---DWRPDAVASLIL 253
+R +EL + + +++ D W + + ++
Sbjct: 94 LGALGVIRSRELEEAARVIDADISWLGHGPADIIHDFGFSKDGDQTFGRWGQNRIVERLV 153
Query: 254 HTIESLDIQAIF-TF-DRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAY 301
+ TF D G H H A+ AA S P +
Sbjct: 154 RAYRKERPDIVIPTFLDVPGQHGH--HRAMTRAAKSAITLAADPSAYPEH 201
>ref|NP_294927.1| (NC_001263) LmbE-related protein [Deinococcus radiodurans]
pir||B75424 LmbE-related protein - Deinococcus radiodurans (strain R1)
gb|AAF10773.1|AE001969_2 (AE001969) LmbE-related protein [Deinococcus radiodurans]
Length = 252
Score = 120 bits (300), Expect = 3e-26
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 24/156 (15%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
R++ + AHPDDE + + +R G +V ++ + GE S ++
Sbjct: 2 RIMAVFAHPDDE-IGCIGTLAKHARR-GDEVLLVWTTLGELAS------------QFGDT 47
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLD 260
E ++RR+ K+G + + M + + + + +
Sbjct: 48 EHEEVRRIRREHGAWVADKIGA-KYHFFDMGDSRMTGGRDEALQ-------LARLYATFR 99
Query: 261 IQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPK 296
A+ T+ HP+H A +PK
Sbjct: 100 PHAVITW--SDDHPHPDHRMTAKIAFDAVTLARIPK 133
>ref|NP_285386.1| (NC_001264) conserved hypothetical protein [Deinococcus
radiodurans]
pir||A75600 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12252.1|AE001862_78 (AE001862) conserved hypothetical protein [Deinococcus radiodurans]
Length = 350
Score = 120 bits (298), Expect = 6e-26
Identities = 38/269 (14%), Positives = 73/269 (27%), Gaps = 43/269 (15%)
Query: 122 LQSGIRL--RSVRLPKTACMERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNG 179
G R R P +RVLL+ HPDDE + G + + G +V+I ++ G
Sbjct: 41 WFGGERQVARLAGTPPFRAGQRVLLLAPHPDDETLCCGGTVQQ-ARAAGAEVFIAWMTAG 99
Query: 180 ETTSSDIIPKPPIDLEALNESNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATN----- 234
+ D + N + R E R+ + LG+P + ++ +
Sbjct: 100 DGFEFDAALTEH--VLVPRPHNMRALGQTRAGEAERAAAVLGVPADHTFMLGYPDGGLFR 157
Query: 235 ------------------LPDDPYVDWRPDAVASL-----ILHTIESLDIQAIFTFDRDG 271
A + ++ + +
Sbjct: 158 LFTTNYATPFTAPRTQASRVYVTGALTPGHAFTGRNLETDLRRVLDRVQPDVVLAPAP-- 215
Query: 272 VSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINV----VRKYLSILDLLCTCF 327
H +H + + + E+ + + L L
Sbjct: 216 QDFHADH---HTLSYIALRLMGERQQEDRLRFWVVHGGVEWPLPKGLHPTLGLTLPPRAA 272
Query: 328 MSTHWCILNWKEAAI-VRSAMMEHQSQMR 355
+ E SA+ +Q+Q R
Sbjct: 273 RLPWQKVALTPEQEQVKLSAVNTYQTQTR 301
>ref|NP_105992.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51778.1| (AP003006) hypothetical protein [Mesorhizobium loti]
Length = 229
Score = 116 bits (289), Expect = 6e-25
Identities = 37/213 (17%), Positives = 66/213 (30%), Gaps = 48/213 (22%)
Query: 141 RVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNES 200
++L + AHPDD +F + QG ++ ++G +S
Sbjct: 2 KILALGAHPDDIEIFMFGTLAVYAA-QGAELTFAVATDGAKG---------------GKS 45
Query: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLD 260
+ A+VRR+E + + L + L D A+ + I
Sbjct: 46 DATVLARVRREEA-TAAAGLLGAAPRFLDFPDGELVADA-------ALIGALKTLIAGTG 97
Query: 261 IQAIFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYLSIL 320
+ T + H +H A+ + + V +
Sbjct: 98 PDLVITHAPNDY--HADHRALSDSVRIAASFAV------------------PVLHADT-- 135
Query: 321 DLLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQ 353
+ T F TH+ + A I A+ HQSQ
Sbjct: 136 -MGGTGFSPTHY-VDISAHAEIKAKAIRMHQSQ 166
>emb|CAC04222.1| (AL391515) conserved hypothetical protein [Streptomyces coelicolor]
Length = 247
Score = 115 bits (287), Expect = 1e-24
Identities = 33/217 (15%), Positives = 57/217 (26%), Gaps = 32/217 (14%)
Query: 140 ERVLLITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNE 199
R L + AHPDD + S G V L + GE + P L +
Sbjct: 17 RRALAVVAHPDDLEYGCSAAVASWVAD-GKDVAYLLATRGEAGIDTLDPGRAGPLREAEQ 75
Query: 200 SNFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESL 259
VR E ++ + + R D +A+ + L
Sbjct: 76 RAAAAAVGVRAVE----------------FLDHRDGVIEYGASLRRD-IAAAVRRHRPEL 118
Query: 260 DIQAIFTFDRD--GVSSHPNHCAVYYAAASLCLANLLPKGEEAYCKFYTLDSINVVRKYL 317
I + D G + P+H AV A + +
Sbjct: 119 VI-TLNHRDTWAAGAWNTPDHVAVGRAVLDAAADAGNR--------WIFPELAEQGLVPW 169
Query: 318 SILDLLCTCFMSTHWCILNWKE--AAIVRSAMMEHQS 352
+ + S E +++ H++
Sbjct: 170 NGV-RWVAVANSPTPSHAVSAEPGFEQGVRSLLRHRT 205
>ref|NP_191372.1| (NM_115675) putative protein [Arabidopsis thaliana]
pir||T45973 hypothetical protein F9D24.40 - Arabidopsis thaliana
emb|CAB68151.1| (AL137081) putative protein [Arabidopsis thaliana]
Length = 124
Score = 104 bits (259), Expect = 2e-21
Identities = 39/131 (29%), Positives = 54/131 (40%), Gaps = 22/131 (16%)
Query: 155 FFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNFEHKAKVRRQELW 214
FF P I L C +++LCLS G N + +R EL
Sbjct: 7 FFSPTINYLASNA-CNLHMLCLSTG---------------------NADGMGSIRNNELH 44
Query: 215 RSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQAIFTFDRDGVSS 274
R+C+ L +P + ++N NL D W D + +I + DI I TFD GVS
Sbjct: 45 RACAVLKVPLQQLKILNHPNLQDGFGQLWSHDLLTEIIEEEVTKHDIHTIITFDNYGVSG 104
Query: 275 HPNHCAVYYAA 285
H NH V+
Sbjct: 105 HCNHRDVHRGV 115
>ref|NP_285456.1| (NC_001264) hypothetical protein [Deinococcus radiodurans]
pir||G75608 hypothetical protein - Deinococcus radiodurans (strain R1)
gb|AAF12317.1|AE001862_143 (AE001862) hypothetical protein [Deinococcus radiodurans]
Length = 232
Score = 100 bits (249), Expect = 3e-20
Identities = 37/212 (17%), Positives = 62/212 (28%), Gaps = 33/212 (15%)
Query: 144 LITAHPDDECMFFGPLIYSLTQRQGCQVYILCLSNGETTSSDIIPKPPIDLEALNESNFE 203
++ HPDDE + + G +V+ L L++G + P L A
Sbjct: 15 VVAPHPDDE-ALGCGALLAALAEAGREVWALLLTDGGFSHPASKAYPRPRLSA------- 66
Query: 204 HKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQA 263
VR E S LG+P + V + LPD + A + +
Sbjct: 67 ----VRLAEWREGLSVLGVPPARTVAL---GLPDGALGEHLTAAARAQVRQAFAQARPGT 119
Query: 264 IFTFDRDGVSSHPNHCAVYYAAASLCLANLLPKG--EEAYCKFYTLDSINVVRKYLSILD 321
+ HP+H A ++ +LP Y + R +
Sbjct: 120 VL--LPWERDPHPDHRAAWHLL-----RGVLPSDTLALEYAVWLPE------RGADADWP 166
Query: 322 LLCTCFMSTHWCILNWKEAAIVRSAMMEHQSQ 353
T A+ H++Q
Sbjct: 167 RPDEVEELTFAVGDWRDA---KARAIASHRTQ 195
CPU time: 98.82 user secs. 2.53 sys. secs 101.35 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.313 0.152 0.441
Gapped
Lambda K H
0.270 0.0532 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236376999
Number of Sequences: 887402
Number of extensions: 10950935
Number of successful extensions: 45165
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 44626
Number of HSP's gapped (non-prelim): 305
length of query: 390
length of database: 277,845,442
effective HSP length: 54
effective length of query: 336
effective length of database: 229,925,734
effective search space: 77255046624
effective search space used: 77255046624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.2 bits)
S2: 74 (33.1 bits)
