IMP GPI Biosynthesis Report IMP-Bioinformatics
GPI Biosynthesis Main Page  
GPI Site Motif   GPI Site Prediction   Home Page B.E.  

GPI Anchor Biosynthesis Report: T41379 (PIG-C family, Schizosaccharomyces pombe)



Sequence Analysis
Name From To Source/E Description
cluster 24 55 SAPS mixed charge cluster
TM 1 80 100 toppred2=1.415  
LCR 87 99 SEG 12 2.2 2.5  
TM 2 104 124 toppred2=1.648  
TM 3 145 165 toppred2=1.973  
TM 4 171 191 toppred2=1.334  
TM 5 --- --- ---  
LCR 201 221 SEG 12 2.2 2.5  
TM 6 224 244 toppred2=2.206  
TM 7 250 270 toppred2=1.556  
TM 8 274 294 toppred2=2.673  
LCR 277 293 SEG 12 2.2 2.5  


Sequence Information
Protein T41379
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|7492813|gb|T41379|T41379 probable phosphatidylinositol- glycan-class c protein - fission yeast (Schizosaccharomyces pombe).
    Protein Sequence 
    MDEVCAAPAP KKMVAKSLVL NTFRKASVKE VVELKKPWKK VLWRKQDYPD NFIDESFLNG
LQRNVNIQVT DFWSLVADSL PVSQHLSSVV IFASVFVSIY RNQLSCALVG FVSNVSAVAA
FILWDFVLRK PCNNRTFPNY MGIVKSCILI VLTLAGLSPI LMSLTKSTSP DSVWAIAVWL
FLANVFFHEY TTETIRPHVR LHNSLSTNAA LSASVVLASR LEKSINVFFF ILFAVHWFAL
FPIFRKYIHV FSFYADMLMT LVLIISAYIA LNAVASVVIA FVFLSLIFFI SFICPIWFIK
LQRFKNEIHG PWDIALPKLG PSKG


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003