Sequences with E-value BETTER than threshold (0.002) 434 e-120
383 e-105
380 e-104
376 e-103
305 7e-82
267 2e-70
248 1e-64
228 1e-58
206 4e-52
Sequences with E-value WORSE than threshold gb|AAC06013.1| (AF051936) ryanodine receptor [Homarus americanus] 39 0.10
ref|NP_495657.1| (NM_063256) sodium/phosphate transporter [Caeno... 33 8.5
Alignments
>pir||T41379 probable phosphatidylinositol- glycan-class c protein - fission
yeast (Schizosaccharomyces pombe)
emb|CAA19108.1| (AL023592) phosphatidylinositol-glycan-class c [Schizosaccharomyces
pombe]
Length = 324
Score = 434 bits (1105), Expect = e-120
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MDEVCAAPAPKKMVAKSLVLNTFRKASVKEVVELKKPWKKVLWRKQDYPDNFIDESFLNG 60
MDEVCAAPAPKKMVAKSLVLNTFRKASVKEVVELKKPWKKVLWRKQDYPDNFIDESFLNG
Sbjct: 1 MDEVCAAPAPKKMVAKSLVLNTFRKASVKEVVELKKPWKKVLWRKQDYPDNFIDESFLNG 60
Query: 61 LQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFASVFVSIYRNQLSCALVGFVSNVSAVAA 120
LQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFASVFVSIYRNQLSCALVGFVSNVSAVAA
Sbjct: 61 LQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFASVFVSIYRNQLSCALVGFVSNVSAVAA 120
Query: 121 FILWDFVLRKPCNNRTFPNYMGIVKSCILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWL 180
FILWDFVLRKPCNNRTFPNYMGIVKSCILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWL
Sbjct: 121 FILWDFVLRKPCNNRTFPNYMGIVKSCILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWL 180
Query: 181 FLANVFFHEYTTETIRPHVRLHNSLSTNAALSASVVLASRLEKSINVFFFILFAVHWFAL 240
FLANVFFHEYTTETIRPHVRLHNSLSTNAALSASVVLASRLEKSINVFFFILFAVHWFAL
Sbjct: 181 FLANVFFHEYTTETIRPHVRLHNSLSTNAALSASVVLASRLEKSINVFFFILFAVHWFAL 240
Query: 241 FPIFRKYIHVFSFYADMLMTLVLIISAYIALNAVASVVIAFVFLSLIFFISFICPIWFIK 300
FPIFRKYIHVFSFYADMLMTLVLIISAYIALNAVASVVIAFVFLSLIFFISFICPIWFIK
Sbjct: 241 FPIFRKYIHVFSFYADMLMTLVLIISAYIALNAVASVVIAFVFLSLIFFISFICPIWFIK 300
Query: 301 LQRFKNEIHGPWDIALPKLGPSKG 324
LQRFKNEIHGPWDIALPKLGPSKG
Sbjct: 301 LQRFKNEIHGPWDIALPKLGPSKG 324
>dbj|BAB29152.1| (AK014096) data source:SPTR, source key:Q92535,
evidence:ISS~homolog to PHOSPHATIDYLINOSITOL-GLYCAN
BIOSYNTHESIS, CLASS C PROTEIN (PIG-C)~putative [Mus
musculus]
gb|AAH06938.1|AAH06938 (BC006938) RIKEN cDNA 3110030E07 gene [Mus musculus]
Length = 297
Score = 383 bits (974), Expect = e-105
Identities = 94/288 (32%), Positives = 167/288 (57%), Gaps = 7/288 (2%)
Query: 28 VKEVVELKKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLS 87
V + E+K W+KVL+ +Q +PDN++D+ FL L++N+ + +W++V +S V Q L
Sbjct: 6 VTDTPEVK--WQKVLYERQPFPDNYVDQRFLEELRKNIYARKYQYWAVVFESSVVIQQLC 63
Query: 88 SVVIFASVFVSIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSC 147
SV +F ++ + L+ + S++ ++L+D + ++ +KS
Sbjct: 64 SVCVFVVIWWYMDEGLLAPQWLFGTGLASSLVGYVLFDLIDGGDGRKKSGRTRWADLKST 123
Query: 148 ILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHNSLST 207
++ + G SP+L +LT+S S D+++A+AV++ L ++ F +Y + ++LS
Sbjct: 124 LVFITFTYGFSPVLKTLTESVSTDTIYAMAVFMLLGHLIFFDYGANA----AIVSSTLSL 179
Query: 208 NAALSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVLIISA 267
N A+ ASV LASRL +S++ F + FA+ FAL+P+ +K + ++ + + +TL+ SA
Sbjct: 180 NMAIFASVCLASRLPRSLHAFIMVTFAIQIFALWPMLQKKLKAYTPRSYVGVTLLFAFSA 239
Query: 268 YIALNAVASVVIAFVFLSLIFFISFICPIWFIKLQRFKNEIHGPWDIA 315
+ L ++ S V A +F L+F IS +CP + I LQ FK IHGPWD A
Sbjct: 240 FGGLLSI-SAVGAILFALLLFSISCLCPYYLIHLQLFKENIHGPWDEA 286
>ref|NP_002633.1| (NM_002642) phosphatidylinositol glycan, class C [Homo sapiens]
ref|XP_002139.1| (XM_002139) phosphatidylinositol glycan, class C [Homo sapiens]
sp|Q92535|PIGC_HUMAN PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS, CLASS C PROTEIN (PIG-C)
pir||JC4969 pig-c protein - human
dbj|BAA12812.1| (D85418) phosphatidylinositol-glycan-class C (PIG-C) [Homo sapiens]
emb|CAB10071.1| (Z97195) PHOSPHATIDYLINISITOL-GLYCAN class C (PIG-C) [Homo sapiens]
gb|AAH06539.1|AAH06539 (BC006539) phosphatidylinositol glycan, class C [Homo sapiens]
Length = 297
Score = 380 bits (968), Expect = e-104
Identities = 92/288 (31%), Positives = 164/288 (56%), Gaps = 7/288 (2%)
Query: 28 VKEVVELKKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLS 87
V E+K W+KVL+ +Q +PDN++D FL L++N++ + +W++V +S V Q L
Sbjct: 6 VTNTKEVK--WQKVLYERQPFPDNYVDRRFLEELRKNIHARKYQYWAVVFESSVVIQQLC 63
Query: 88 SVVIFASVFVSIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSC 147
SV +F ++ + L+ + S++ ++L+D + ++ +KS
Sbjct: 64 SVCVFVVIWWYMDEGLLAPHWLLGTGLASSLIGYVLFDLIDGGEGRKKSGQTRWADLKSA 123
Query: 148 ILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHNSLST 207
++ + G SP+L +LT+S S D+++A++V++ L ++ F +Y + ++LS
Sbjct: 124 LVFITFTYGFSPVLKTLTESVSTDTIYAMSVFMLLGHLIFFDYGANA----AIVSSTLSL 179
Query: 208 NAALSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVLIISA 267
N A+ ASV LASRL +S++ F + FA+ FAL+P+ +K + + + + +TL+ SA
Sbjct: 180 NMAIFASVCLASRLPRSLHAFIMVTFAIQIFALWPMLQKKLKACTPRSYVGVTLLFAFSA 239
Query: 268 YIALNAVASVVIAFVFLSLIFFISFICPIWFIKLQRFKNEIHGPWDIA 315
L ++ S V A +F L+ IS +CP + I+LQ FK IHGPWD A
Sbjct: 240 VGGLLSI-SAVGAVLFALLLMSISCLCPFYLIRLQLFKENIHGPWDEA 286
>dbj|BAA22866.1| (AB000360) PIGC [Homo sapiens]
Length = 297
Score = 376 bits (957), Expect = e-103
Identities = 91/288 (31%), Positives = 163/288 (56%), Gaps = 7/288 (2%)
Query: 28 VKEVVELKKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLS 87
V E+K W+KVL+ +Q +PDN++D FL L++N++ + +W++V +S V Q L
Sbjct: 6 VTNTKEVK--WQKVLYERQPFPDNYVDRRFLEELRKNIHARKYQYWAVVFESSVVIQQLC 63
Query: 88 SVVIFASVFVSIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSC 147
SV +F ++ + L+ + S++ ++L+D + ++ +KS
Sbjct: 64 SVCVFVVIWWYMDEGLLAPHWLLGTGLASSLIGYVLFDLIDGGEGRKKSGQTRWADLKSA 123
Query: 148 ILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHNSLST 207
++ + G SP+L +LT+S S D+++A++V++ L ++ F +Y + ++LS
Sbjct: 124 LVFITFTYGFSPVLKTLTESVSTDTIYAMSVFMLLGHLIFFDYGANA----AIVSSTLSL 179
Query: 208 NAALSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVLIISA 267
N A+ ASV LASRL +S++ F + FA+ FAL+P+ +K + + + + +TL+ SA
Sbjct: 180 NMAIFASVCLASRLPRSLHAFIMVTFAIQIFALWPMLQKKLKACTPRSYVGVTLLFAFSA 239
Query: 268 YIALNAVASVVIAFVFLSLIFFISFICPIWFIKLQRFKNEIHGPWDIA 315
L ++ S V A +F L+ IS +C + I+LQ FK IHGPWD A
Sbjct: 240 VGGLLSI-SAVGAVLFALLLMSISCLCSFYLIRLQLFKENIHGPWDEA 286
>ref|NP_501645.1| (NM_069244) T20D3.8.p [Caenorhabditis elegans]
pir||T25032 hypothetical protein T20D3.8 - Caenorhabditis elegans
emb|CAA92490.2| (Z68220) cDNA EST yk416d12.3 comes from this gene~cDNA EST
yk416d12.5 comes from this gene~cDNA EST yk586b10.3
comes from this gene~cDNA EST yk586b10.5 comes from this
gene [Caenorhabditis elegans]
Length = 282
Score = 305 bits (774), Expect = 7e-82
Identities = 79/283 (27%), Positives = 139/283 (48%), Gaps = 15/283 (5%)
Query: 38 WKKVLWRKQDYPDNFI--DESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFASV 95
W+K+L+RKQ +PDN+ D FL L++NV++ D+ S V + HL + ++ +
Sbjct: 7 WQKILYRKQPFPDNYSGGDAQFLKELRKNVSVVHYDYKSAVFGCMNFLTHLDMITMYFVL 66
Query: 96 FVSIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSCILIVLTLA 155
F++I + S ++ V +++ V F++ P N + ++ + +
Sbjct: 67 FLNILHSNWSINILYSVFSLTIVLYLFFCKFLIPNPANAKEH------ARTIFTLFIFAY 120
Query: 156 GLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHNSLSTNAALSASV 215
+P++ +LT S S D++++ ++ + + FFH+Y + P V S+ST LS+++
Sbjct: 121 AFTPVIRTLTTSISTDTIYSTSIITAIFSCFFHDYGVKA--PVVSYPTSVST--GLSSAI 176
Query: 216 VLASRLEKSINVFFFILFAVHWFALFPIFRKYI-HVFSFYADMLMTLVLIISAYIALNAV 274
L SRLE ++ A A FR I HV+ + + + + S Y +
Sbjct: 177 FLLSRLEGDTPTLLLLVVAFTLHAYGAEFRNRIFHVYPCLSSTIFCFLSLFSIYCISDFS 236
Query: 275 ASVVIAFVFLSLIFFISFICPIWFIKLQRFKNEIHGPWDIALP 317
+ I F L + FI FICP+ I Q K IHGPWD A+P
Sbjct: 237 LELSICFALLHI--FILFICPLILILKQTGKCTIHGPWDEAVP 277
>ref|NP_181043.1| (NM_129050) putative phosphatidylinositol-glycan synthase
[Arabidopsis thaliana]
pir||T00479 hypothetical protein F19I3.21 - Arabidopsis thaliana
gb|AAC12837.1| (AC004238) putative phosphatidylinositol-glycan synthase
[Arabidopsis thaliana]
Length = 303
Score = 267 bits (676), Expect = 2e-70
Identities = 88/285 (30%), Positives = 146/285 (50%), Gaps = 11/285 (3%)
Query: 38 WKKVLW--RKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFASV 95
W+KV + + Y DN+ DESFL + N N+ D ++ DS+ +SQ+L V + V
Sbjct: 15 WRKVAYGGMQIGYDDNYTDESFLEEMVMNANVVRRDLLKVMKDSVSISQYLCIVALVVLV 74
Query: 96 FVSIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSCILIVLTLA 155
+V + L + + + F++ K + Y+ + L
Sbjct: 75 WVHTLESSLDENSLLLLDLSLLASGFLILLLTEEKMLSLSLLLRYLVNIS---FFTTGLY 131
Query: 156 GLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRP-----HVRLHNSLSTNAA 210
L+PI +LT+S S DS+WA+ V L L ++F H+Y+ TIR L + +S NA+
Sbjct: 132 ILAPIYQTLTRSISSDSIWAVTVSLLLLHLFLHDYSGSTIRAPGALKTPNLTSCISVNAS 191
Query: 211 LSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVLIISAYIA 270
+ ASV +ASRL ++VF +LF++ F P+ I F+F +L + L+ +
Sbjct: 192 IVASVFVASRLPSRLHVFAVMLFSLQVFLFAPLVTYCIKKFNFGLHLLFSFALMGLTLYS 251
Query: 271 LNAVASVVIAFVFLSLIFFISFICPIWFIKLQRFKNEIHGPWDIA 315
+ A+ + VFLSL+ ++ +CP W I++Q +K EI+GPWD A
Sbjct: 252 IYALHR-LFFLVFLSLVLLVNVVCPYWLIRMQEYKFEINGPWDEA 295
>ref|NP_015249.1| (NC_001148) Required for synthesis of
N-acetylglucoaminylphosphatidylinositol, the first
intermediate in synthesis of
glycosylphosphatidylinositol (GPI) anchors; Gpi2p
[Saccharomyces cerevisiae]
sp|P46961|GPI2_YEAST N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN GPI2
pir||S61111 GPI2 protein - yeast (Saccharomyces cerevisiae)
dbj|BAA06128.1| (D29645) Gcr4p [Saccharomyces cerevisiae]
gb|AAB68262.1| (U41849) Gpi2p [Saccharomyces cerevisiae]
Length = 280
Score = 248 bits (627), Expect = 1e-64
Identities = 85/304 (27%), Positives = 136/304 (43%), Gaps = 46/304 (15%)
Query: 35 KKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFAS 94
+ PWK++LW KQ+YPDN+ D SF+ R A+S S S A
Sbjct: 3 RSPWKRLLWLKQEYPDNYTDPSFIELRARQ-----------KAESNQKSDRKLSEAARAQ 51
Query: 95 V---FVSIYRNQLSCALVGFVSNVSAVAAF------ILWDFVLRKPCNNRTFPNYMGI-- 143
+ F+S Y+ L+ + + F I F+ + P
Sbjct: 52 IRLDFISFYQTILNTSFIYITFTYIYYYGFDPIPPTIFLSFITLIISRTKVDPLLSSFMD 111
Query: 144 VKSCILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHN 203
VKS ++I + LSP+L SL+K+T+ DS+W ++ WL L +F T +P +
Sbjct: 112 VKSSLIITFAMLTLSPVLKSLSKTTASDSIWTLSFWLTLWYIFVISSTKSKDKP-----S 166
Query: 204 SLSTNAALSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVL 263
+LSTN ++ VL+SRL +I+VF F+L + + P Y + +V
Sbjct: 167 NLSTNILVALVAVLSSRLSTTIDVFCFLLICIQLNIILPT----------YLSVTNKVVP 216
Query: 264 IISAYIALNAVASVVIAFVFLSLIFFISF----ICPIWF----IKLQRFKNEIHGPWDIA 315
IIS I + + +V + ++++ LIFF S + P WF I + N++ WD
Sbjct: 217 IISNIIVYSFL-NVALGWIYMLLIFFASVFYITVLPKWFIYWKINYHKRDNDLLSTWDAR 275
Query: 316 LPKL 319
P L
Sbjct: 276 TPIL 279
>gb|AAA79518.1| (U23788) Gpi2p [Saccharomyces cerevisiae]
Length = 268
Score = 228 bits (576), Expect = 1e-58
Identities = 72/267 (26%), Positives = 118/267 (43%), Gaps = 34/267 (12%)
Query: 35 KKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFAS 94
+ PWK++LW KQ+YPDN+ D SF+ R A+S S S A
Sbjct: 3 RSPWKRLLWLKQEYPDNYTDPSFIELRARQ-----------KAESNQKSDRKLSEARRAQ 51
Query: 95 V---FVSIYRNQLSCALVGFVSNVSAVAAF------ILWDFVLRKPCNNRTFPNYMGI-- 143
+ F+S Y+ L+ + + F I F+ + P
Sbjct: 52 IRLDFISFYQTILNTSFIYITFTYIYYYGFDPIPPTIFLSFITLIISRTKVDPLLSSFMD 111
Query: 144 VKSCILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHN 203
VKS ++I + LSP+L SL+K+T+ DS+W ++ WL L +F T +P +
Sbjct: 112 VKSSLIITFAMLTLSPVLKSLSKTTASDSIWTLSFWLTLWYIFVISSTKSKDKP-----S 166
Query: 204 SLSTNAALSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVL 263
+LSTN ++ VL+SRL +I+VF F+L + + P + + ++ ++
Sbjct: 167 NLSTNILVALVAVLSSRLSTTIDVFCFLLICIQLNIILPTYLS-------VTNKVVPIIS 219
Query: 264 IISAYIALNAVASVVIAFVFLSLIFFI 290
I Y LN + +F L +FI
Sbjct: 220 NIIVYSFLNVALGWIYMLLFSLLQYFI 246
>gb|AAF47758.1| (AE003477) CG12077 gene product [Drosophila melanogaster]
Length = 256
Score = 206 bits (521), Expect = 4e-52
Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 47/289 (16%)
Query: 28 VKEVVELKKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLS 87
VK ++PW K L+ ++YPDN+ D SFL L+ N++ ++ F +A ++ +S
Sbjct: 2 VKNGQSKRQPWVKNLYSNREYPDNYTDASFLKDLRTNLHCRIYTFGEAIAGITVLNNQIS 61
Query: 88 SVVIFASVFVSIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSC 147
+ F ++ + + +S + S ++ + + ++ K+
Sbjct: 62 CITGFLILYQLMLSDSVSPTTILVPSCGITGIGYLCYR------GRSLSWALLGEDSKTL 115
Query: 148 ILIVLTLAGLSPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYTTETIRPHVRLHNSLST 207
+ +VL SP+L +LT++ S D+++ + ++ L N+ F Y +
Sbjct: 116 VTVVLFGYLFSPMLHTLTQAISTDTIYTMTFFVLLGNLIFGHYGLD-------------- 161
Query: 208 NAALSASVVLASRLEKSINVFFFILFAVHWFALFPIFRKYIHVFSFYADMLMTLVLIISA 267
V + S+ A +F L+PI + +++A ++ + I
Sbjct: 162 -------VAMVSK-------------AAVFFVLYPIMTEA----NWHAGFMLPIFAICC- 196
Query: 268 YIALNAVASVVIAFVFLSLIFFISFICPIWFIKLQRFKNEIHGPWDIAL 316
+AL ++ V+ +++ S FI+F+CP F+ Q++K IHGPWD A+
Sbjct: 197 -MALYCISRPVL-YLYASTTIFINFVCPFIFVWQQQYKFNIHGPWDEAI 243
>gb|AAC06013.1| (AF051936) ryanodine receptor [Homarus americanus]
Length = 1513
Score = 39.3 bits (91), Expect = 0.10
Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 18/131 (13%)
Query: 11 KKMVAKSLVLNTFRKASVKEVVELKKPWKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVT 70
+K VA+ L + A E ++K W K++ + +P+N+ D F+ R +
Sbjct: 1151 EKDVARRLEFDGVYVAEQPEDDDIKAHWDKLVISAKSFPNNYWD-KFVKKKVRQKYSETY 1209
Query: 71 DFWSL-----VADSLPVSQ---------HLSSVVIFASVF---VSIYRNQLSCALVGFVS 113
DF ++ + ++ Q +++SV V+ V++ NQ L
Sbjct: 1210 DFDAISNLLGMETTMSFKQEEASTGILGYITSVDWRYQVWKAGVTVTDNQFLYNLWYLTF 1269
Query: 114 NVSAVAAFILW 124
+V + +
Sbjct: 1270 SVLGNINYFFF 1280
>ref|NP_495657.1| (NM_063256) sodium/phosphate transporter [Caenorhabditis elegans]
pir||T24333 hypothetical protein T01H3.3 - Caenorhabditis elegans
emb|CAA92687.1| (Z68317) similar to sodium/phosphate transporter~cDNA EST
EMBL:T01627 comes from this gene~cDNA EST yk181g5.5
comes from this gene~cDNA EST yk181g5.3 comes from this
gene~cDNA EST yk240h2.5 comes from this gene
[Caenorhabditis elegans]
Length = 599
Score = 32.6 bits (74), Expect = 8.5
Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 48/246 (19%)
Query: 75 LVADSLPVSQHLSSVVIFASVFVSIYRNQLSCALVGFVSNVSAVAAFILWDFV--LRKPC 132
++ S + + + + ++ ++ + ++I L
Sbjct: 210 VIFGSFVTINLIKKFGVRKVFSICMVQS----TILILLFLYVQKRSYIFLLLTRFLLGFS 265
Query: 133 NNRTFPNY------MGIVKSCILIVLTLAGL---SPIL--------MSLTKSTSPDSVW- 174
+ FP G +K ++ + ++ P++ +L S DSV+
Sbjct: 266 FSSVFPVMGNLLIQWGPLKEQLIFITSMFMFLSIGPVVSWPIAHYFHAL--EISLDSVYY 323
Query: 175 ----AIAVWLFLANVFFHE--------YTTETIRPHVRLHNSLSTNAALSASVVLASRLE 222
+A + ++F+ + E + N L +N AL+ + R
Sbjct: 324 IQCGTLAFLTLIWSIFYRDRPQDHPWVSGVELNKIVAGKVNELRSNRALADAYTSLFRSL 383
Query: 223 K--SINVFFFILFAVHWF--ALFPIFRKYIHVF-----SFYADMLMTLVLI-ISAYIALN 272
SI F LF+V F P VF ++ L+ + + +LN
Sbjct: 384 SAWSIWTSAFGLFSVTAFFSIYLPSLLASPDVFVVEGLGIHSSFPFQLLPLSCIIFSSLN 443
Query: 273 AVASVV 278
+
Sbjct: 444 VLFKPS 449
CPU time: 99.42 user secs. 2.30 sys. secs 101.72 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.318 0.170 0.490
Gapped
Lambda K H
0.270 0.0595 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195613734
Number of Sequences: 887402
Number of extensions: 8828939
Number of successful extensions: 52424
Number of sequences better than 10.0: 552
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 552
Number of HSP's that attempted gapping in prelim test: 51730
Number of HSP's gapped (non-prelim): 1018
length of query: 324
length of database: 277,845,442
effective HSP length: 52
effective length of query: 272
effective length of database: 231,700,538
effective search space: 63022546336
effective search space used: 63022546336
T: 11
A: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (20.9 bits)
S2: 74 (32.9 bits)
