Sequences with E-value BETTER than threshold (0.002)
emb|CAC50079.1| GPI inositol deacylase [Trypanosoma brucei br... 1154 0.0
ref|NP_001628.1| acyloxyacyl hydrolase precursor [Homo sapien... 346 7e-94
gb|AAB81183.1| acyloxyacyl hydrolase [Oryctolagus cuniculus] 339 1e-91
ref|NP_036184.1| acyloxyacyl hydrolase [Mus musculus] >gi|252... 332 9e-90
gb|AAM43641.1| ACYLOXYACYL HYDROLASE [Dictyostelium discoideum] 329 2e-88
ref|XP_225370.1| similar to acyloxyacyl hydrolase [Mus muscul... 67 1e-09
Sequences with E-value WORSE than threshold
ref|NP_509810.1| P-glycoprotein family member [Caenorhabditis... 35 5.0
ref|NP_739120.1| putative trehalose-6-phosphate phophatase [C... 34 9.9
Alignments
>emb|CAC50079.1| GPI inositol deacylase [Trypanosoma brucei brucei]
Length = 558
Score = 1154 bits (2954), Expect = 0.0
Identities = 558/558 (100%), Positives = 558/558 (100%)
Query: 1 MSRLYIFYKLLLFTALLQLTVVCPSIHTAKAEARESKSLGSSDTWGCVLCTAVVATVSQL 60
MSRLYIFYKLLLFTALLQLTVVCPSIHTAKAEARESKSLGSSDTWGCVLCTAVVATVSQL
Sbjct: 1 MSRLYIFYKLLLFTALLQLTVVCPSIHTAKAEARESKSLGSSDTWGCVLCTAVVATVSQL 60
Query: 61 GQLHQIPAKDALGLFCSFFRSAEAVLCKTASLILLEGALQLIDEGRTPDKVCQIMKYCDT 120
GQLHQIPAKDALGLFCSFFRSAEAVLCKTASLILLEGALQLIDEGRTPDKVCQIMKYCDT
Sbjct: 61 GQLHQIPAKDALGLFCSFFRSAEAVLCKTASLILLEGALQLIDEGRTPDKVCQIMKYCDT 120
Query: 121 EECILFPPDKNDTLPLHKLRSAYRLDGRKLVDACRTFPTLCRPLFEDSAHDKDGDRFSTY 180
EECILFPPDKNDTLPLHKLRSAYRLDGRKLVDACRTFPTLCRPLFEDSAHDKDGDRFSTY
Sbjct: 121 EECILFPPDKNDTLPLHKLRSAYRLDGRKLVDACRTFPTLCRPLFEDSAHDKDGDRFSTY 180
Query: 181 PAKRGTDWRGRDCDDDDARVYPGRNSTDSQRDENCNGIYGVEESSKKTYEELWCSNSSPM 240
PAKRGTDWRGRDCDDDDARVYPGRNSTDSQRDENCNGIYGVEESSKKTYEELWCSNSSPM
Sbjct: 181 PAKRGTDWRGRDCDDDDARVYPGRNSTDSQRDENCNGIYGVEESSKKTYEELWCSNSSPM 240
Query: 241 GVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPVLDNEIDWPMLSGLTGFANSTRYEP 300
GVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPVLDNEIDWPMLSGLTGFANSTRYEP
Sbjct: 241 GVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPVLDNEIDWPMLSGLTGFANSTRYEP 300
Query: 301 DVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGSILSILDSVARNRSESVKPAYVFFS 360
DVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGSILSILDSVARNRSESVKPAYVFFS
Sbjct: 301 DVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGSILSILDSVARNRSESVKPAYVFFS 360
Query: 361 MVGNDVCPRPQDAPTPLDYYHSLSEAVKKADSFLPPGSHVLIVSLVDARAAIGSIVNRIH 420
MVGNDVCPRPQDAPTPLDYYHSLSEAVKKADSFLPPGSHVLIVSLVDARAAIGSIVNRIH
Sbjct: 361 MVGNDVCPRPQDAPTPLDYYHSLSEAVKKADSFLPPGSHVLIVSLVDARAAIGSIVNRIH 420
Query: 421 PIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSNESVRNETWERASAMNSMISRVVDESTN 480
PIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSNESVRNETWERASAMNSMISRVVDESTN
Sbjct: 421 PIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSNESVRNETWERASAMNSMISRVVDESTN 480
Query: 481 LENVKVHALGDVIGEVVSSFEGPLWKLVNPVDGFHPSQIATALMGARVFAKMQDLGILPT 540
LENVKVHALGDVIGEVVSSFEGPLWKLVNPVDGFHPSQIATALMGARVFAKMQDLGILPT
Sbjct: 481 LENVKVHALGDVIGEVVSSFEGPLWKLVNPVDGFHPSQIATALMGARVFAKMQDLGILPT 540
Query: 541 ENPFNGDIQRRFGDQGGY 558
ENPFNGDIQRRFGDQGGY
Sbjct: 541 ENPFNGDIQRRFGDQGGY 558
>ref|NP_001628.1| acyloxyacyl hydrolase precursor [Homo sapiens]
sp|P28039|AOAH_HUMAN Acyloxyacyl hydrolase precursor
pir||A40292 acyloxyacyl hydrolase (EC 3.1.1.-), neutrophil precursor
[validated] - human
gb|AAA35506.1| acyloxyacyl hydrolase
gb|AAH25698.1| acyloxyacyl hydrolase (neutrophil) [Homo sapiens]
Length = 575
Score = 346 bits (879), Expect = 7e-94
Identities = 203/568 (35%), Positives = 308/568 (53%), Gaps = 44/568 (7%)
Query: 25 SIHTAKAEARESKSLGS-SDTWGCVLCTAVVATVSQLGQLHQIPAKDALGLFCSFFRSAE 83
S+ ++ + A + +S S S+ CV C VV+ + QL Q+H + ++ CS+ E
Sbjct: 18 SLQSSASPANDDQSRPSLSNGHTCVGCVLVVSVIEQLAQVHNSTVQASMERLCSYL--PE 75
Query: 84 AVLCKTASLILLE----GALQLIDEGRTPDKVCQIMKYCDTEE----CILFP-PDKNDTL 134
+ KT ++++ ++L+ D VC +++C C L+P P +
Sbjct: 76 KLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQPLCHLYPLPKETWKF 135
Query: 135 PLHKLRSAYRLD-----GRKLVDACRTFPTL---CRPL---FEDSA--HDKDGDRFSTYP 181
L K R + R D C + P L C+ + E S D D D++S +P
Sbjct: 136 TLQKARQIVKKSPILKYSRSGSDIC-SLPVLAKICQKIKLAMEQSVPFKDVDSDKYSVFP 194
Query: 182 AKRGTDWRGRDCDDDDARVYPGR--NSTDSQRDENCNGIYGVEESSKKTYEELWCSNSSP 239
RG WRGRDC+D D VYPGR N+ D +D NCNGI+GV+ YE+ +C S P
Sbjct: 195 TLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKDGVPYEKKFCEGSQP 254
Query: 240 MGVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPVLDNEIDWPMLSGLTGFANSTRYE 299
G+I +GDSA A F I +++ +S + N+ L NE+DWP LSG TGF +ST
Sbjct: 255 RGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQLSGATGFLDST--- 311
Query: 300 PDVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGSILSILDSVARNRSESVKPAYVFF 359
V S+Y +L + N CNHRDYQN+ NGA S ++ ++S++RN+ PA V +
Sbjct: 312 --VGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVLDY-PAIVIY 368
Query: 360 SMVGNDVCPRPQDA----PTPLDYYHSLSEAVKKADSFLPPGSHVLIVSLVDARAAIGSI 415
+M+GNDVC D TP Y ++ + +K +S LP GSHV++ L D ++
Sbjct: 369 AMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPDGTFLWDNL 428
Query: 416 VNRIHPIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSNESVRNETWERASAMNSMISRVV 475
NR HP+G LN D+TY LY +LNCLQVSPC GW++SN+++R T ERA +++ + ++
Sbjct: 429 HNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQLSNTLKKIA 488
Query: 476 DESTNLENVKVHALGDVIGEVVSSFE---GPLWKLVNPVDGFHPSQIATALMGARVFAKM 532
S N + + E++ ++ G W+L+ PVDGFHP+++A L+ + K+
Sbjct: 489 -ASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNEVALLLLADHFWKKV 547
Query: 533 QDL--GILPTENPFNGDIQRRFGDQGGY 558
Q IL ENPFN I++ FGDQGG+
Sbjct: 548 QLQWPQILGKENPFNPQIKQVFGDQGGH 575
>gb|AAB81183.1| acyloxyacyl hydrolase [Oryctolagus cuniculus]
Length = 575
Score = 339 bits (861), Expect = 1e-91
Identities = 206/586 (35%), Positives = 322/586 (54%), Gaps = 50/586 (8%)
Query: 8 YKLLLFTALLQLTVVCPSIHTAKAEARESKSLGSSDTWGCVLCTAVVATVSQLGQLHQIP 67
+++L+ + LL L + T++A + ++ SD + CV C VV+ + QL Q+H
Sbjct: 5 WRILVVSPLLLLPLH---SSTSRAHDNQPGTI-RSDHYTCVGCVLVVSVIEQLAQVHNST 60
Query: 68 AKDALGLFCSFFRSAEAVLCKTASLILLE--GA--LQLIDEGRTPDKVCQIMKYCDTEE- 122
+ ++ CS+ E + KTA +++ GA ++L D+ D VC +++C E
Sbjct: 61 VQASMERLCSYL--PEEWVLKTACYMMVHVFGADIIKLFDKDVNADVVCHTLEFCKQEPG 118
Query: 123 ---CILFP-PDKNDTLPLHKLRSAYRLDGRKLVDACRTFPTLCRPLF------------E 166
C L+P P ++ L K R + ++ R+ +C F +
Sbjct: 119 QPLCHLYPLPKESWKFTLEKARHIVKQS--PIMKYTRSGAGICSLPFLAKICQKIKLAIK 176
Query: 167 DSA--HDKDGDRFSTYPAKRGTDWRGRDCDDDDARVYPGR--NSTDSQRDENCNGIYGVE 222
+S D D D++S +P RG WRGRDC+D D VYPGR ++ D+ RD NCNGI+GV+
Sbjct: 177 NSVPIKDVDSDKYSIFPTLRGYHWRGRDCNDSDKTVYPGRRPDNWDAHRDSNCNGIWGVD 236
Query: 223 ESSKKTYEELWCSNSSPMGVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPVLDNEID 282
YE+ +C S P G+I +GDSA A F IP ++++ +S + N+ + NE+D
Sbjct: 237 PKDGIPYEKKFCEGSQPRGIILLGDSAGAHFHIPPEWLTVSQMSVNSFLNLPTAVTNELD 296
Query: 283 WPMLSGLTGFANSTRYEPDVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGSILSILD 342
WP LSG TGF +S + S+Y +L + NRCNHRDYQN+ NGA S ++ S+++
Sbjct: 297 WPQLSGTTGFLDSASKIKE-----NSIYLRLRKRNRCNHRDYQNISKNGASSRNVKSLIE 351
Query: 343 SVARNRSESVKPAYVFFSMVGNDVCPRPQDAP-----TPLDYYHSLSEAVKKADSFLPPG 397
S++RN+ PA V ++M+GNDVC + P TP Y ++ + ++ +S LP G
Sbjct: 352 SLSRNQLLD-HPAIVIYAMIGNDVCNGRKTDPVSAMTTPEQLYANVLKMLEALNSHLPTG 410
Query: 398 SHVLIVSLVDARAAIGSIVNRIHPIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSNESVR 457
SHV++ L ++ +R HP+G LN DVTY LY +L CLQVSPC GW+++NE++R
Sbjct: 411 SHVILYGLAHGAFLWDTLHSRYHPLGQLNKDVTYTQLYSFLGCLQVSPCPGWMSANETLR 470
Query: 458 NETWERASAMNSMISRVVDESTNLENVKVHALGDVIGEVVSSFE---GPLWKLVNPVDGF 514
T ERA ++ + R + S N + L EVV ++ G W+L+ VDGF
Sbjct: 471 ALTSERAQQLSETL-RKIAASKKFTNFNLFYLDFAFQEVVEEWQKMGGQPWELIEAVDGF 529
Query: 515 HPSQIATALMGARVFAKMQDL--GILPTENPFNGDIQRRFGDQGGY 558
HP+++A L +++ K+Q +L ENPFN I+ FGDQGG+
Sbjct: 530 HPNEVALLLFADQLWEKVQRQWPDVLGKENPFNPQIEEVFGDQGGH 575
>ref|NP_036184.1| acyloxyacyl hydrolase [Mus musculus]
gb|AAB81182.1| acyloxyacyl hydrolase [Mus musculus]
dbj|BAC39187.1| unnamed protein product [Mus musculus]
Length = 574
Score = 332 bits (844), Expect = 9e-90
Identities = 199/581 (34%), Positives = 315/581 (53%), Gaps = 47/581 (8%)
Query: 12 LFTALLQLTVVCPSIHTAKAEARESKSLGSSDTWGCVLCTAVVATVSQLGQLHQIPAKDA 71
+F L L ++ S+ + +E + S + C+ C +V+ + QL ++H + A
Sbjct: 7 VFKTTLLLLLLSHSLASVPSEDQPGDSYSHGQS--CLGCVVLVSVIEQLAEVHNSSVQVA 64
Query: 72 LGLFCSFFRSAEAVLCKTASLILLE----GALQLIDEGRTPDKVCQIMKYCD----TEEC 123
+ CS+ E + KTA L++ ++L+DE D VC +++C +C
Sbjct: 65 MERLCSYL--PEKLFLKTACYFLVQTFGSDIIKLLDEAMKADVVCYALEFCKRGAVQPQC 122
Query: 124 ILFP-PDKNDTLPLHKLRSAYRLDG-----RKLVDACRTFPTL---CRPLFEDSA----- 169
L+P P + L K R R R + C + P L C+ + E S
Sbjct: 123 HLYPLPQEAWESALEKARQVLRRSSTMKYPRSGRNIC-SLPFLTKICQKI-ELSIKKAVP 180
Query: 170 -HDKDGDRFSTYPAKRGTDWRGRDCDDDDARVYPGR--NSTDSQRDENCNGIYGVEESSK 226
D D D+ S +P RG WRGRDC+D D VYPGR ++ D +D NCNGI+G++
Sbjct: 181 FKDIDSDKHSVFPTLRGYHWRGRDCNDSDKTVYPGRRPDNWDIHQDSNCNGIWGIDPKDG 240
Query: 227 KTYEELWCSNSSPMGVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPVLDNEIDWPML 286
YE+ +C S P G+I +GDSA A F IP +++ +S + N+ L +E++WP L
Sbjct: 241 IPYEKKFCEGSQPRGIILLGDSAGAHFHIPPEWLTASQMSVNSFLNLPSALTDELNWPQL 300
Query: 287 SGLTGFANSTRYEPDVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGSILSILDSVAR 346
SG+TGF +ST + S+Y +L + N CNHRDYQ++ NGA S ++ + ++S++R
Sbjct: 301 SGVTGFLDSTSGIEE-----KSIYHRLRKRNHCNHRDYQSISKNGASSRNLKNFIESLSR 355
Query: 347 NRSESVKPAYVFFSMVGNDVCPRPQDA----PTPLDYYHSLSEAVKKADSFLPPGSHVLI 402
N++ S PA V ++M+GNDVC D TP Y ++ + + +S LP GSHV++
Sbjct: 356 NQA-SDHPAIVLYAMIGNDVCNSKADTVPEMTTPEQMYANVMQTLTHLNSHLPNGSHVIL 414
Query: 403 VSLVDARAAIGSIVNRIHPIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSNESVRNETWE 462
L D S+ NR HP+G LN DVTY + +L CLQ++PC GW++SN+++R T E
Sbjct: 415 YGLPDGTFLWDSLHNRYHPLGQLNKDVTYAQFFSFLRCLQLNPCNGWMSSNKTLRTLTSE 474
Query: 463 RASAMNSMISRVVDESTNLENVKVHALGDVIGEVVSSFE---GPLWKLVNPVDGFHPSQI 519
RA +++ + ++ T N + + E++ ++ G W+L+ PVDGFHP+++
Sbjct: 475 RAEQLSNTLKKIATTET-FANFDLFYVDFAFHEIIEDWQKRGGQPWQLIEPVDGFHPNEV 533
Query: 520 ATALMGARVFAKMQDL--GILPTENPFNGDIQRRFGDQGGY 558
A+ L RV+ K+Q +L ENPFN I+ FGDQGG+
Sbjct: 534 ASLLQANRVWEKIQLQWPHVLGKENPFNSQIEEVFGDQGGH 574
>gb|AAM43641.1| ACYLOXYACYL HYDROLASE [Dictyostelium discoideum]
Length = 564
Score = 329 bits (834), Expect = 2e-88
Identities = 194/532 (36%), Positives = 283/532 (52%), Gaps = 42/532 (7%)
Query: 47 CVLCTAVVATVSQLGQLHQIPAKDALGLFCSFFRSAEAVLCKTASLILLEGALQLIDEGR 106
C CT V++ V+Q +H +D+L CSFF LC E + D+ +
Sbjct: 54 CAACTIVLSLVNQYSGIHNKSIEDSLDELCSFFPDEAGSLCTWLVNTYGEQIISYFDQYQ 113
Query: 107 TPDKVCQIMKYCDTEECILFPPDKNDTLPLHKLRSAYRLDGRK--------LVDACRTFP 158
D VC M C + C LF + + Y + K + + + F
Sbjct: 114 NADDVCHAMNVCTSPTCRLFTSAPSKFYNPDHVHQEYNKEDPKVGGSPWAWIQELIKVFS 173
Query: 159 TLCRPLFEDSAHDKDGDRFSTYPAKRGTDWRGRDCDDDDARVYPG--RNSTDSQRDENCN 216
+ P+ D DGD S RG +WRG+DC+D D YPG + D+ D+NCN
Sbjct: 174 SEHLPI-----QDFDGDHHSLEATFRGYNWRGKDCNDFDKSSYPGTIEGTGDASVDKNCN 228
Query: 217 GIYGVEESSKKTYEELWCSNSSPMGVIAVGDSATADFGIPLGYVSILDLSSEAVANIIPV 276
GI+GV S ++YEEL+CSNS MGVI GDSA A F IP +++ D++S +I +
Sbjct: 229 GIFGVNNQS-QSYEELFCSNSGAMGVIVSGDSAGAHFSIPPQWMTARDINSTTYKGMIDI 287
Query: 277 LDNEIDWPMLSGLTGFANSTRYEPDVDGPMTSVYSKLVELNRCNHRDYQNLGHNGARSGS 336
L+ E+DWPM S TG+ S P+VD S+Y ++ E N CNHRDYQNLG NGA S S
Sbjct: 288 LETEVDWPMRSCYTGWDTSA---PNVD----SMYLRMRERNLCNHRDYQNLGVNGASSSS 340
Query: 337 ILSILDSVARNRSESVKPAYVFFSMVGNDVCPRPQD---APTPLDYYHSLSEAVKKADSF 393
+I+ ++ RN++ KP +F ++GNDVC D T ++ ++ + ++
Sbjct: 341 TRTIIQTINRNQNTD-KPVLLFLELIGNDVCSGHHDYDSMTTVEEFGENILTILNYLETT 399
Query: 394 LPPGSHVLIVSLVDARAAIGSIVNRIHPIGTLNSDVTYGNLYDYLNCLQVSPCWGWLNSN 453
LP GSHV+ V L D R S+ NR HP+G TY +YD+LNC+QVSPCWGW+N N
Sbjct: 400 LPKGSHVVFVGLADGRVLWDSLWNRTHPLG-----CTYEEVYDFLNCIQVSPCWGWMNPN 454
Query: 454 ESVRNETWERASAMNSMISRVVDEST--NLENVKVHALGDVIGEVVSSFEGPLWKLVNPV 511
E+VR+ T RA+ ++ + ++++ T N + + I E+ + G + L+ P+
Sbjct: 455 ETVRDYTSNRAAQLSLVYNQLIKNYTFNNFDMIYYDFPFATINEMWVAQGGQTYDLIEPI 514
Query: 512 DGFHPSQIATALMGARVFAKM-QD----LGILPTENPFNGDIQRRFGDQGGY 558
DGFHP+QIA LM + ++ QD LG + N +N IQ FG+QGGY
Sbjct: 515 DGFHPNQIANYLMAGVFYNQIAQDKPEWLGEI---NQYNTQIQSIFGNQGGY 563
>ref|XP_225370.1| similar to acyloxyacyl hydrolase [Mus musculus] [Rattus norvegicus]
Length = 212
Score = 66.9 bits (161), Expect = 1e-09
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 171 DKDGDRFSTYPAKRGTDWRGRDCDDDDARVYPGR--NSTDSQRDENCNGIYGVEESSKKT 228
D D D++S +P RG WRGRDC+D D VYPGR ++ D +D NCNGI+ + +S +T
Sbjct: 9 DGDSDKYSVFPTLRGYHWRGRDCNDKDKTVYPGRRPDNWDIHQDSNCNGIW-LNCASTRT 67
Query: 229 Y 229
Y
Sbjct: 68 Y 68
>ref|NP_509810.1| P-glycoprotein family member [Caenorhabditis elegans]
pir||T18939 hypothetical protein C05A9.1 - Caenorhabditis elegans
emb|CAA94202.1| C. elegans PGP-5 protein (corresponding sequence C05A9.1)
[Caenorhabditis elegans]
Length = 1283
Score = 34.9 bits (79), Expect = 5.0
Identities = 12/27 (44%), Positives = 19/27 (69%)
Query: 100 QLIDEGRTPDKVCQIMKYCDTEECILF 126
++ +EG +C+I+KYC +E CILF
Sbjct: 690 EIKEEGAKKSNICEIIKYCRSEYCILF 716
>ref|NP_739120.1| putative trehalose-6-phosphate phophatase [Corynebacterium
efficiens YS-314]
dbj|BAC19320.1| putative trehalose-6-phosphate phophatase [Corynebacterium
efficiens YS-314]
Length = 258
Score = 34.1 bits (77), Expect = 9.9
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 176 RFSTYPAKRGTDWRGRDCDDDDARVYPGRNSTDSQRDENCNGIYGVEESSKKTYEELWCS 235
R S A G R D D D +V G+N + Y V ++K ++ S
Sbjct: 136 RVSDPDAIAGIQARAADIDTRDLKVTKGKNIIE----------YSVSRATKGSWLREHIS 185
Query: 236 NSSPMGVIAVGDSATADFGIPL 257
+ P GVI +GD T + G +
Sbjct: 186 RTEPTGVIFIGDDTTDEHGFEM 207
CPU time: 131.20 user secs. 2.45 sys. secs 133.65 total secs.
Database: nr
Posted date: Jan 18, 2003 1:23 PM
Number of letters in database: 421,297,171
Number of sequences in database: 1,315,992
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472230860
Number of Sequences: 1315992
Number of extensions: 20163973
Number of successful extensions: 42729
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 42688
Number of HSP's gapped (non-prelim): 14
length of query: 558
length of database: 421,297,171
effective HSP length: 57
effective length of query: 501
effective length of database: 346,285,627
effective search space: 173489099127
effective search space used: 173489099127
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 76 (34.0 bits)