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GPI Anchor Biosynthesis Report: NP_197414.1 (GAA1 family, Arabidopsis thaliana)



Sequence Analysis
Name From To Source/E Description
LCR 38 59 SEG 12 2.2 2.5  
TM 1 39 59 toppred2=2.160  
LCR 313 328 SEG 12 2.2 2.5  
TM 2 447 467 toppred2=2.093  
LCR 458 471 SEG 12 2.2 2.5  
TM 3 502 522 toppred2=1.841  
TM 4 532 552 toppred2=1.894  
TM 5 570 590 toppred2=1.988  
TM 6 622 642 toppred2=2.373  
LCR 644 657 SEG 12 2.2 2.5  
TM 7 674 694 toppred2=1.850  


Sequence Information
Protein NP_197414.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|15239657|gb|NP_197414.1|NP_197414 GPAA1 - like protein [Arabidopsis thaliana].
    Protein Sequence 
    MAAVNRDNEE EVKTDDGSPK IKPRPIVRLG IFLIAHSPVF SVVFSAAGVL ALLLLPLLAK 
NTYISENALM PGSARSMLSN RDVSDGSKLV KDIKNFRLNH EGQVQKLIGK YMSDMGAEVS 
YQKFHPEGNQ FHPLHFFSGP DSYTLLENVS CASYGVNVAG IIRAPRGDGK ESIVLVTPYD 
FINGGDYEDL SLGIVSSLFS LLSRVTWLSK DIIWLVADSR YGDYRPVAAW LTEYHSPSFK 
VSDLLKCDEQ NTADNFRRAG TMAAALVLKV DGRSEKFEDT LSIYAEASNG QMPNLDLINV 
VNYLAVHRQG FYVKVEKVVS LLSSSWLKIF GEIFEAVGKL AHMLNPDWNF GIPAADYLEG 
SATLASSLYS QALGIPTGPH GAFRDYQVDA ITLKVSPRFP PDSKTRQHDF FLRGARLLEG
TIRSVNNLLE KFHQSFFLYM LTSPSKFISV GVYMIAFALL VAPLPMVAAS LYIDGCKSLT 
NSTHNPTENF KSWKWLDAAK QVFTLHLLGF IVTLLPYFIC QVPGQHSPTN RSIMWGTTSS 
SLLLITFVTM PGCSPFSSRL HGTNWAILKS VTISAAFIGL CLMSIINFAT AEIGALLLVP 
TCLMAQPIKP ALRSRRLKSL LGAFCSIVLL TIGFPVMFFA ISKGLLGEGL VGLSLGGEFW 
TWLESLWAWK SATYLYIGMV HLPCWLLCLC ILFHPS


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 28th January 2003