Sequences with E-value BETTER than threshold (0.002)
ref|NP_034461.1| (NM_010331) GPI anchor attachment protein 1 [Mu... 871 0.0
ref|NP_003792.1| (NM_003801) anchor attachment protein 1; anchor... 844 0.0
gb|AAF46094.1| (AE003435) CG3033 gene product [Drosophila melano... 727 0.0
ref|NP_491700.1| (NM_059299) F33D11.9b.p [Caenorhabditis elegans... 714 0.0
pir||T46923 hypothetical protein DKFZp434E1512.1 - human >gi|701... 682 0.0
ref|NP_572273.1| (NM_132045) CG3033 gene product [Drosophila mel... 648 0.0
ref|NP_197414.1| (NM_121918) GPAA1 - like protein [Arabidopsis t... 634 e-180
pir||T32771 hypothetical protein F33D11.9b - Caenorhabditis elegans 587 e-166
ref|NP_013189.1| (NC_001144) ER protein essential for attaching ... 533 e-150
emb|CAB86709.1| (AL163505) hypothetical protein L3640.14 [Leishm... 274 4e-72
ref|NP_491701.1| (NM_059300) F33D11.9a.p [Caenorhabditis elegans... 132 1e-29
Sequences with E-value WORSE than threshold
ref|NP_187166.1| (NM_111387) putative sugar transporter [Arabido... 36 1.6
Alignments
>ref|NP_034461.1| (NM_010331) GPI anchor attachment protein 1 [Mus musculus]
dbj|BAA82589.1| (AB002136) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Mus musculus]
dbj|BAA82591.1| (AB002138) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Mus musculus]
dbj|BAB03274.1| (AB006970) GPI anchor attachment protein [Mus musculus]
dbj|BAB03275.1| (AB006971) GPI anchor attachment protein [Mus musculus]
gb|AAH06697.1|AAH06697 (BC006697) GPI anchor attachment protein 1 [Mus musculus]
Length = 621
Score = 871 bits (2227), Expect = 0.0
Identities = 621/621 (100%), Positives = 621/621 (100%)
Query: 1 MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMV 60
MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMV
Sbjct: 1 MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMV 60
Query: 61 EEQFVGGDRARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHE 120
EEQFVGGDRARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHE
Sbjct: 61 EEQFVGGDRARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHE 120
Query: 121 RYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDI 180
RYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDI
Sbjct: 121 RYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDI 180
Query: 181 IFLVTDHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVE 240
IFLVTDHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVE
Sbjct: 181 IFLVTDHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVE 240
Query: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASG 300
GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASG
Sbjct: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASG 300
Query: 301 RPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFY 360
RPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFY
Sbjct: 301 RPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFY 360
Query: 361 LLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQ 420
LLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQ
Sbjct: 361 LLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQ 420
Query: 421 GVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPH 480
GVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPH
Sbjct: 421 GVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPH 480
Query: 481 NTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGP 540
NTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGP
Sbjct: 481 NTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGP 540
Query: 541 RTLYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLF 600
RTLYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLF
Sbjct: 541 RTLYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLF 600
Query: 601 PILALGLYPCWLLFWNVLFWK 621
PILALGLYPCWLLFWNVLFWK
Sbjct: 601 PILALGLYPCWLLFWNVLFWK 621
>ref|NP_003792.1| (NM_003801) anchor attachment protein 1; anchor attachment protein
1 (Gaa1p, yeast) homolog; glycophosphatidylinositol
anchor attachment 1 [Homo sapiens]
dbj|BAA24035.1| (AB006969) hGAA1 [Homo sapiens]
dbj|BAA82588.1| (AB002135) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Homo sapiens]
dbj|BAA82590.1| (AB002137) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Homo sapiens]
gb|AAH03171.1|AAH03171 (BC003171) anchor attachment protein 1 (Gaa1p, yeast) homolog [Homo
sapiens]
gb|AAH04129.1|AAH04129 (BC004129) anchor attachment protein 1 (Gaa1p, yeast) homolog [Homo
sapiens]
Length = 621
Score = 844 bits (2158), Expect = 0.0
Identities = 567/621 (91%), Positives = 588/621 (94%)
Query: 1 MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMV 60
MGLLSDPVRRRALAR+VLRLN PLCVLSYVAGIAWFLAL FPPLTQRTYMSENAMGSTMV
Sbjct: 1 MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV 60
Query: 61 EEQFVGGDRARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHE 120
EEQF GGDRAR+FARDFAAHRKK GALPVAWLER+MRSVGLEVYTQSFSRKLPFPDETHE
Sbjct: 61 EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE 120
Query: 121 RYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDI 180
RYMVSGTNVYGILRAPR+ASTESLVLTVPCG D+TNSQAVGLLLALAAHFRGQIYWAKDI
Sbjct: 121 RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI 180
Query: 181 IFLVTDHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVE 240
+FLVT+HDLLGTEAWLEAYHD+NVTG+QSSPLQGRAGAIQAAVALELSSDVVTSLDV VE
Sbjct: 181 VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE 240
Query: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASG 300
GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQP+DWTSL+GPLQGLQTLLLMVLRQASG
Sbjct: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG 300
Query: 301 RPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFY 360
RPHG HGLFLRY VEALTLRGINSFRQYKYDL VGKALEGMFRKLNHLLERLHQSFF Y
Sbjct: 301 RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY 360
Query: 361 LLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQ 420
LLP LSRFVSIGLYMPA GFLLLVLGLKALELWMQLH+AG+ EE G AP P PL P+Q
Sbjct: 361 LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420
Query: 421 GVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPH 480
GVGLASL APLLISQAMGLALY LPVLGQH+ATQHFPVAEAEAVVLTLLAIY AGLALPH
Sbjct: 421 GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH 480
Query: 481 NTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGP 540
NTHRVV++Q PDRGWMALKLVALIYLALQLGCIAL NFSLGFLLA TMVP AALAKPHGP
Sbjct: 481 NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP 540
Query: 541 RTLYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLF 600
RTLYAALLV+TSPA TL GSLFLWREL E PLSLAEGWQLFL ALAQGVLEH+TYGALLF
Sbjct: 541 RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF 600
Query: 601 PILALGLYPCWLLFWNVLFWK 621
P+L+LGLYPCWLLFWNVLFWK
Sbjct: 601 PLLSLGLYPCWLLFWNVLFWK 621
>gb|AAF46094.1| (AE003435) CG3033 gene product [Drosophila melanogaster]
Length = 674
Score = 727 bits (1858), Expect = 0.0
Identities = 221/666 (33%), Positives = 315/666 (47%), Gaps = 72/666 (10%)
Query: 1 MGLLSDP--VRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGST 58
MGLLSDP + L + R +C YVAG+AWF LA P TY+SENA+
Sbjct: 1 MGLLSDPSISTQSKLVDGLARHVRKVCYALYVAGVAWFFCLALPEFNHGTYLSENALSPG 60
Query: 59 MVEEQF-VGGDR-ARSFARDFAAHRKKP-GALPVAWLERSMRSVGLEVYTQSFSRKLPF- 114
+V + + +R A + RK P AW+ M GLE +T +++ + PF
Sbjct: 61 LVYPEIRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMNEFGLETHTHNYTLRYPFG 120
Query: 115 -PDETHERYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATN----SQAVGLLLALAAH 169
E H G N+YGILRAPR ASTE +V P ++ S +V LLLA A
Sbjct: 121 GGKEYH------GKNIYGILRAPRIASTEGIVFAAPYRAASSVHTDISASVPLLLAFADF 174
Query: 170 FRGQIYWAKDIIFLVTDHDLLGTEAWLEAYH------DINVTGIQSSPLQGRAGAIQAAV 223
R + YWAKD+IFL+T+ + LG +AWLEAYH D++ ++ L RAG++QAA+
Sbjct: 175 ARRKNYWAKDLIFLITEQEQLGMQAWLEAYHDGDRELDLSKAYLRPGNLPARAGSLQAAL 234
Query: 224 ALELSSDVVTSLDVTVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGP 283
+E+ + +DV +EGLNG+LPNLD+ NL Q + G+ + + + S
Sbjct: 235 NIEVQDLEIDHVDVRIEGLNGKLPNLDMFNLVQRIMAREGIASGYKQAPRKKRRHSQSHF 294
Query: 284 LQGLQTLLLMVLRQASGRPHGPHGLFLRYGVEALTL----RGINSFRQYKYDLATVG--K 337
Q + +L M+ Q+SG P G HGLF RY ++ALT+ R ++ + A V K
Sbjct: 295 EQNFRQMLTMLASQSSGVPTGNHGLFHRYRIDALTIAANRRATHATLKGSPGSAAVPLLK 354
Query: 338 ALEGMFRKLNHLLERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLH 397
A+EG+ R LN+LLER HQSFFFY++ + R++SIG YMPA L+ LKA W L
Sbjct: 355 AIEGIARSLNNLLERFHQSFFFYVIVSNDRYISIGDYMPALVALVACAFLKAYLTWSTLP 414
Query: 398 QAGVNPEEAGK-------------APSPGTPLLPTQGVGLASLTAPLLI---SQAMGLAL 441
E+A P LP V L LTA LLI + L
Sbjct: 415 ATNAELEKAAGWLREHEQEAELEENLEPDKFELPYGSV-LIYLTATLLIGFLCNVLPLQQ 473
Query: 442 YFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPHNTHRVVNSQVPDRGWMALKLV 501
YFL + P+ A L + + G LP +P G L +
Sbjct: 474 YFLEI----------PMGAAPLTTSVLSFLSLIGFVLPFVVV------LPPGGLELLHVA 517
Query: 502 ALIYLALQLGCIALLNFSLGFLLAATMVP--AAALAKPHGPR-----TLYAALLVVTSPA 554
L+ L I LLNF+LG A VP A K R T+ A LV+
Sbjct: 518 FLLIYGCALIVIGLLNFALGLFAAVLTVPLVIALETKEENSRSTLRNTIRLATLVMNPMM 577
Query: 555 VTLFGSLFL-WRELLEVPLS--LAEGWQLFLTALAQGVLEHYTYGALLFPILALGLYPCW 611
V L + + + E+P+ + + A A G+++ YG L+ ++ P W
Sbjct: 578 VVYVIVLAMTFYQFPELPVQKIMLRAATAAMDASAYGLIDSVIYGNWLYFVICTIFLPLW 637
Query: 612 LLFWNV 617
++ W +
Sbjct: 638 IICWTL 643
>ref|NP_491700.1| (NM_059299) F33D11.9b.p [Caenorhabditis elegans]
gb|AAK68360.1|AF039720_13 (AF039720) Hypothetical protein F33D11.9b [Caenorhabditis elegans]
Length = 670
Score = 714 bits (1825), Expect = 0.0
Identities = 143/644 (22%), Positives = 249/644 (38%), Gaps = 82/644 (12%)
Query: 9 RRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMVEEQFVGGD 68
R + +L+ +++Y+ L P + T +SE+++ +V +F
Sbjct: 28 TRPKILDKILKFRKVALIIAYIGAYLSAQWLFDPVNMEVTRISEHSLMPGLVTPKFDKSG 87
Query: 69 RARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTN 128
A R F+ K + + +GLE +T + K+ ++G N
Sbjct: 88 IAIQLYRRFSDLPKSKSQQEL--IHTIFSDLGLECFTHKWRSKVAGNP-------MNGEN 138
Query: 129 VYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDIIFLVTD-- 186
VYG +R PR+ E+ ++ V G + + + +LA + + Q+YWA+DI+ + D
Sbjct: 139 VYGFIRGPRNDGAEAQMIVVQLGRSEKSRRMMSRMLAFVDYAKDQVYWARDIVIVFVDGG 198
Query: 187 -------HDLLGTEAWLEAYHDINVTG------IQSSPLQGRAGAIQAAVALELSSDVVT 233
+A+L Y I +++ +Q + GA+ V +LS V
Sbjct: 199 EKNDSIEKAAFALDAFLLKYQKIEALNSKKSITVEADEIQAQTGALIGGVVYDLSGMAVK 258
Query: 234 S---LDVTVEGLNGQLPNLDLLNLFQTFC-----QKGGLLCTLQGKLQP-QDWTSLEGPL 284
+++ GLNGQ NLD+ N + + TL P +++ P+
Sbjct: 259 GQHIVNIQTNGLNGQQVNLDVFNGITKIADSKHHSRVAIFGTLHRHSNPYMEYSPFIVPM 318
Query: 285 QGLQTLLLMVLRQASGRPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFR 344
+ L T QA G H + +YGV+ LT+ + Y G+ +E + R
Sbjct: 319 RALYT-------QAFISIEGIHSVLGKYGVQGLTVG-----LSHDYSEKQTGQFIEEVSR 366
Query: 345 KLNHLLERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPE 404
LN++LERLHQS+F Y+L F SI +Y+ L+ L + A W ++ +
Sbjct: 367 MLNNVLERLHQSYFMYVLADDLHFSSIAMYIIPLTILVSPLVISAYFEWTKIQE------ 420
Query: 405 EAGKAPSPGTPLLPTQGVGLASLTAPLLISQAMG----LALYFLPVLGQHLATQHF-PVA 459
+ P L +G A + Q +G L P +G F P
Sbjct: 421 --FQFP---VVHLAFHVLGFFYYIATTYVFQTIGTTFVLQWMQWPFVGIDGCDGQFTPSW 475
Query: 460 EAEAVVLTLLAIYVAGLALPHNTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFS 519
L I + R V S +++V L+ +L L I L NF
Sbjct: 476 SLINSFLIFFMIPLGPYVFLKEPVRCVPS---------MRIVCLLETSLVLYGICLTNFG 526
Query: 520 LGFLLAATMVPAAALAKPHGPRTLY--AALLVVTSPAV---TLFGSLFLWRELLEVPLSL 574
L L A +VP L R+++ + L ++ +V ++ +L P
Sbjct: 527 LAILCTAFVVPIVFL---MTTRSIFRSSVLAILNPISVLAFVAINIPGMFGQL--FPTIS 581
Query: 575 AEGWQLFLTALA-QGVLEHYTYGALLFPILALGLYPCW-LLFWN 616
+ W ++A + E + F +L YP W +LF
Sbjct: 582 QDSWLAAAQSIALTAIREDVEFKVNHFFLLCCFGYPIWNMLFAC 625
>pir||T46923 hypothetical protein DKFZp434E1512.1 - human
emb|CAB75660.1| (AL157437) hypothetical protein [Homo sapiens]
gb|AAH06383.1|AAH06383 (BC006383) Unknown (protein for MGC:12663) [Homo sapiens]
Length = 499
Score = 682 bits (1743), Expect = 0.0
Identities = 452/499 (90%), Positives = 470/499 (93%)
Query: 123 MVSGTNVYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDIIF 182
MVSGTNVYGILRAPR+ASTESLVLTVPCG D+TNSQAVGLLLALAAHFRGQIYWAKDI+F
Sbjct: 1 MVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVF 60
Query: 183 LVTDHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVEGL 242
LVT+HDLLGTEAWLEAYHD+NVTG+QSSPLQGRAGAIQAAVALELSSDVVTSLDV VEGL
Sbjct: 61 LVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGL 120
Query: 243 NGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASGRP 302
NGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQP+DWTSL+GPLQGLQTLLLMVLRQASGRP
Sbjct: 121 NGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASGRP 180
Query: 303 HGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFYLL 362
HG HGLFLRY VEALTLRGINSFRQYKYDL VGKALEGMFRKLNHLLERLHQSFF YLL
Sbjct: 181 HGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLL 240
Query: 363 PALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQGV 422
P LSRFVSIGLYMPA GFLLLVLGLKALELWMQLH+AG+ EE G AP P PL P+QGV
Sbjct: 241 PGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQGV 300
Query: 423 GLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPHNT 482
GLASL APLLISQAMGLALY LPVLGQH+ATQHFPVAEAEAVVLTLLAIY AGLALPHNT
Sbjct: 301 GLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNT 360
Query: 483 HRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGPRT 542
HRVV++Q PDRGWMALKLVALIYLALQLGCIAL NFSLGFLLA TMVP AALAKPHGPRT
Sbjct: 361 HRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRT 420
Query: 543 LYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLFPI 602
LYAALLV+TSPA TL GSLFLWREL E PLSLAEGWQLFL ALAQGVLEH+TYGALLFP+
Sbjct: 421 LYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPL 480
Query: 603 LALGLYPCWLLFWNVLFWK 621
L+LGLYPCWLLFWNVLFWK
Sbjct: 481 LSLGLYPCWLLFWNVLFWK 499
>ref|NP_572273.1| (NM_132045) CG3033 gene product [Drosophila melanogaster]
gb|AAK77275.1| (AY047543) GH05723p [Drosophila melanogaster]
Length = 561
Score = 648 bits (1654), Expect = 0.0
Identities = 203/581 (34%), Positives = 279/581 (47%), Gaps = 64/581 (11%)
Query: 1 MGLLSDP--VRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGST 58
MGLLSDP + L + R +C YVAG+AWF LA P TY+SENA+
Sbjct: 1 MGLLSDPSISTQSKLVDGLARHVRKVCYALYVAGVAWFFCLALPEFNHGTYLSENALSPG 60
Query: 59 MVEEQF-VGGDR-ARSFARDFAAHRKKP-GALPVAWLERSMRSVGLEVYTQSFSRKLPF- 114
+V + + +R A + RK P AW+ M GLE +T +++ + PF
Sbjct: 61 LVYPEIRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMNEFGLETHTHNYTLRYPFG 120
Query: 115 -PDETHERYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATN----SQAVGLLLALAAH 169
E H G N+YGILRAPR ASTE +V P ++ S +V LLLA A
Sbjct: 121 GGKEYH------GKNIYGILRAPRIASTEGIVFAAPYRAASSVHTDISASVPLLLAFADF 174
Query: 170 FRGQIYWAKDIIFLVTDHDLLGTEAWLEAYH------DINVTGIQSSPLQGRAGAIQAAV 223
R + YWAKD+IFL+T+ + LG +AWLEAYH D++ ++ L RAG++QAA+
Sbjct: 175 ARRKNYWAKDLIFLITEQEQLGMQAWLEAYHDGDRELDLSKAYLRPGNLPARAGSLQAAL 234
Query: 224 ALELSSDVVTSLDVTVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGP 283
+E+ + +DV +EGLNG+LPNLD+ NL Q + G+ + + + S
Sbjct: 235 NIEVQDLEIDHVDVRIEGLNGKLPNLDMFNLVQRIMAREGIASGYKQAPRKKRRHSQSHF 294
Query: 284 LQGLQTLLLMVLRQASGRPHGPHGLFLRYGVEALTL----RGINSFRQYKYDLATVG--K 337
Q + +L M+ Q+SG P G HGLF RY ++ALT+ R ++ + A V K
Sbjct: 295 EQNFRQMLTMLASQSSGVPTGNHGLFHRYRIDALTIAANRRATHATLKGSPGSAAVPLLK 354
Query: 338 ALEGMFRKLNHLLERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLH 397
A+EG+ R LN+LLER HQSFFFY++ + R++SIG YMPA L+ LKA W L
Sbjct: 355 AIEGIARSLNNLLERFHQSFFFYVIVSNDRYISIGDYMPALVALVACAFLKAYLTWSTLP 414
Query: 398 QAGVNPEEAGK-------------APSPGTPLLPTQGVGLASLTAPLLI---SQAMGLAL 441
E+A P LP V L LTA LLI + L
Sbjct: 415 ATNAELEKAAGWLREHEQEAELEENLEPDKFELPYGSV-LIYLTATLLIGFLCNVLPLQQ 473
Query: 442 YFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPHNTHRVVNSQVPDRGWMALKLV 501
YFL + P+ A L + + G LP +P G L +
Sbjct: 474 YFLEI----------PMGAAPLTTSVLSFLSLIGFVLPFVVV------LPPGGLELLHVA 517
Query: 502 ALIYLALQLGCIALLNFSLGFLLAATMVP--AAALAKPHGP 540
L+ L I LLNF+LG A VP A K
Sbjct: 518 FLLIYGCALIVIGLLNFALGLFAAVLTVPLVIALETKEENS 558
>ref|NP_197414.1| (NM_121918) GPAA1 - like protein [Arabidopsis thaliana]
Length = 696
Score = 634 bits (1619), Expect = e-180
Identities = 177/698 (25%), Positives = 276/698 (39%), Gaps = 105/698 (15%)
Query: 5 SDPVRRRALARIVLRLNTPLCVLSYV-AGIAWFLALAFPPLTQRTYMSENAMGSTMVEEQ 63
S ++ R + R+ + L V S V + L P L + TY+SENA+
Sbjct: 18 SPKIKPRPIVRLGIFLIAHSPVFSVVFSAAGVLALLLLPLLAKNTYISENALMPGSARSM 77
Query: 64 FVGGDRA--RSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHER 121
D + +D R + + M +G EV Q F P ++ H
Sbjct: 78 LSNRDVSDGSKLVKDIKNFRLNHEGQVQKLIGKYMSDMGAEVSYQKFH---PEGNQFHPL 134
Query: 122 YMVS----------------GTNVYGILRAPRSASTESLVLTVPC----GPDATNSQAVG 161
+ S G NV GI+RAPR ES+VL P G D + ++G
Sbjct: 135 HFFSGPDSYTLLENVSCASYGVNVAGIIRAPRGDGKESIVLVTPYDFINGGDYED-LSLG 193
Query: 162 LLLALAAHFRGQIYWAKDIIFLVTDH---DLLGTEAWLEAYH--DINVTGIQSSPLQG-- 214
++ +L + + +KDII+LV D D AWL YH V+ + Q
Sbjct: 194 IVSSLFSLLSRVTWLSKDIIWLVADSRYGDYRPVAAWLTEYHSPSFKVSDLLKCDEQNTA 253
Query: 215 ----RAGAIQAAVALEL---SSDVVTSLDVTVEGLNGQLPNLDLLNLF------------ 255
RAG + AA+ L++ S +L + E NGQ+PNLDL+N+
Sbjct: 254 DNFRRAGTMAAALVLKVDGRSEKFEDTLSIYAEASNGQMPNLDLINVVNYLAVHRQGFYV 313
Query: 256 --------------QTFCQKGGLLCTLQGKLQPQDWT---SLEGPLQGLQTLLLMVLRQA 298
+ F + + L L P DW L+G TL + QA
Sbjct: 314 KVEKVVSLLSSSWLKIFGEIFEAVGKLAHMLNP-DWNFGIPAADYLEGSATLASSLYSQA 372
Query: 299 SGRPHGPHGLFLRYGVEALTLRGINSF------RQYKYDLATVGKALEGMFRKLNHLLER 352
G P GPHG F Y V+A+TL+ F RQ+ + L + LEG R +N+LLE+
Sbjct: 373 LGIPTGPHGAFRDYQVDAITLKVSPRFPPDSKTRQHDFFLRG-ARLLEGTIRSVNNLLEK 431
Query: 353 LHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWM----QLHQAGVNPEEAGK 408
HQSFF Y+L + S+F+S+G+YM A L+ L + A L++ L + NP E K
Sbjct: 432 FHQSFFLYMLTSPSKFISVGVYMIAFALLVAPLPMVAASLYIDGCKSLTNSTHNPTENFK 491
Query: 409 A---PSPGTPLLPTQGVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVV 465
+ + +G P I Q V GQH T + +
Sbjct: 492 SWKWLDAAKQVFTLHLLGFIVTLLPYFICQ----------VPGQHSPTNRSIMWGTTSSS 541
Query: 466 LTLLAIYVAGLALPHNTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLA 525
L L+ P +S++ W LK V + + L ++++NF+ + A
Sbjct: 542 LLLITFVTMPGCSPF------SSRLHGTNWAILKSVTISAAFIGLCLMSIINFATAEIGA 595
Query: 526 ATMVPAAALAKPHGP----RTLYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLF 581
+VP +A+P P R L + L S + G ++ + + L
Sbjct: 596 LLLVPTCLMAQPIKPALRSRRLKSLLGAFCSIVLLTIGFPVMFFAISKGLLGEGLVGLSL 655
Query: 582 LTALAQGVLEHYTYGALLFPILALGLYPCWLLFWNVLF 619
+ + + + + + + PCWLL +LF
Sbjct: 656 GGEFWTWLESLWAWKSATYLYIGMVHLPCWLLCLCILF 693
>pir||T32771 hypothetical protein F33D11.9b - Caenorhabditis elegans
Length = 885
Score = 587 bits (1499), Expect = e-166
Identities = 112/511 (21%), Positives = 197/511 (37%), Gaps = 61/511 (11%)
Query: 9 RRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMVEEQFVGGD 68
R + +L+ +++Y+ L P + T +SE+++ +V +F
Sbjct: 290 TRPKILDKILKFRKVALIIAYIGAYLSAQWLFDPVNMEVTRISEHSLMPGLVTPKFDKSG 349
Query: 69 RARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTN 128
A R F+ K + + +GLE +T + K+ ++G N
Sbjct: 350 IAIQLYRRFSDLPKSKSQQEL--IHTIFSDLGLECFTHKWRSKVAGNP-------MNGEN 400
Query: 129 VYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDIIFLVTD-- 186
VYG +R PR+ E+ ++ V G + + + +LA + + Q+YWA+DI+ + D
Sbjct: 401 VYGFIRGPRNDGAEAQMIVVQLGRSEKSRRMMSRMLAFVDYAKDQVYWARDIVIVFVDGG 460
Query: 187 -------HDLLGTEAWLEAYHDINVTG------IQSSPLQGRAGAIQAAVALELSSDVVT 233
+A+L Y I +++ +Q + GA+ V +LS V
Sbjct: 461 EKNDSIEKAAFALDAFLLKYQKIEALNSKKSITVEADEIQAQTGALIGGVVYDLSGMAVK 520
Query: 234 S---LDVTVEGLNGQLPNLDLLNLFQTFC-----QKGGLLCTLQGKLQP-QDWTSLEGPL 284
+++ GLNGQ NLD+ N + + TL P +++ P+
Sbjct: 521 GQHIVNIQTNGLNGQQVNLDVFNGITKIADSKHHSRVAIFGTLHRHSNPYMEYSPFIVPM 580
Query: 285 QGLQTLLLMVLRQASGRPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFR 344
+ L T QA G H + +YGV+ LT+ + Y G+ +E + R
Sbjct: 581 RALYT-------QAFISIEGIHSVLGKYGVQGLTVG-----LSHDYSEKQTGQFIEEVSR 628
Query: 345 KLNHLLERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPE 404
LN++LERLHQS+F Y+L F SI +Y+ L+ L + A W ++ +
Sbjct: 629 MLNNVLERLHQSYFMYVLADDLHFSSIAMYIIPLTILVSPLVISAYFEWTKIQE------ 682
Query: 405 EAGKAPSPGTPLLPTQGVGLASLTAPLLISQAMG----LALYFLPVLGQHLATQHF-PVA 459
+ P L +G A + Q +G L P +G F P
Sbjct: 683 --FQFP---VVHLAFHVLGFFYYIATTYVFQTIGTTFVLQWMQWPFVGIDGCDGQFTPSW 737
Query: 460 EAEAVVLTLLAIYVAGLALPHNTHRVVNSQV 490
L I + +S +
Sbjct: 738 SLINSFLIFFMIPLGPYVFLKTRSIFRSSVL 768
Score = 96.5 bits (238), Expect = 1e-18
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 514 ALLNFSLGFLLAATMVPAAALAKPHGPRTLY--AALLVVTSPAV---TLFGSLFLWRELL 568
+L+N L F + P L R+++ + L ++ +V ++ +L
Sbjct: 738 SLINSFLIFFMIPLG-PYVFL----KTRSIFRSSVLAILNPISVLAFVAINIPGMFGQL- 791
Query: 569 EVPLSLAEGWQLFLTALA-QGVLEHYTYGALLFPILALGLYPCW-LLFWN 616
P + W ++A + E + F +L YP W +LF
Sbjct: 792 -FPTISQDSWLAAAQSIALTAIREDVEFKVNHFFLLCCFGYPIWNMLFAC 840
>ref|NP_013189.1| (NC_001144) ER protein essential for attaching GPI
(glycosylphosphatidylinositol) to protein; Gaa1p
[Saccharomyces cerevisiae]
sp|P39012|GAA1_YEAST GAA1 PROTEIN
pir||S45053 membrane protein END2 - yeast (Saccharomyces cerevisiae)
emb|CAA55944.1| (X79409) Gaa1 [Saccharomyces cerevisiae]
gb|AAB67592.1| (U53880) Gaa1p [Saccharomyces cerevisiae]
emb|CAA97649.1| (Z73260) ORF YLR088w [Saccharomyces cerevisiae]
Length = 614
Score = 533 bits (1359), Expect = e-150
Identities = 150/543 (27%), Positives = 251/543 (45%), Gaps = 69/543 (12%)
Query: 1 MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLT---QRTYMSENAMGS 57
M LL RR +V R+ L V+S + + F+++A P+ +RTY+SENA+
Sbjct: 1 MALLEKLHRRIVDMGLVPRIIALLPVISMLCALFGFISIAILPMDGQYRRTYISENALMP 60
Query: 58 TMVEEQFVGGDRARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDE 117
+ F + + R + + K+ + + +ER+ + + Q F K +
Sbjct: 61 SQAYSYF--RESEWNILRGYRSQIKE--MVNMTSMERNNL---MGSWLQEFGTKTAIYE- 112
Query: 118 THERYMVSGTNVYGILRAPRSASTESLVLTVPC--GPDATNSQAVGLLLALAAHFRGQIY 175
+E+Y G +YG++ APR TE++VL VP D N L ++LA F
Sbjct: 113 -NEQY---GETLYGVMHAPRGDGTEAMVLAVPWFNSDDEFNIGGAALGVSLARFFSRWPV 168
Query: 176 WAKDIIFLVTDHDLLGTEAWLEAYH-DINVTGIQSSPLQGRAGAIQAAVALELSS--DVV 232
W+K+II + +++ +W+EAYH +++TG G+I+AAV L+ SS D
Sbjct: 169 WSKNIIVVFSENPRAALRSWVEAYHTSLDLTG----------GSIEAAVVLDYSSTEDFF 218
Query: 233 TSLDVTVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLL 292
++++ +GLNG+LPNLDL+N+ + + G+ +L G P D + L+ L L
Sbjct: 219 EYVEISYDGLNGELPNLDLVNIAISITEHEGMKVSLHG--LPSDQLTNNNFWSRLKILCL 276
Query: 293 MVLRQASGRPHGPHG--LFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLL 350
+ A PHG F + ++++TL+ + +D+ T G+ E MFR +N+LL
Sbjct: 277 GIRDWALSGVKKPHGNEAFSGWRIQSVTLK---AHGNSGHDITTFGRIPEAMFRSINNLL 333
Query: 351 ERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAP 410
E+ HQSFFFYLL A +FVSI Y+P+ L + + +L ++ A ++
Sbjct: 334 EKFHQSFFFYLLLAPRQFVSISSYLPSAVALSIAFAISSLNAFINNAYANISLF------ 387
Query: 411 SPGTPLLPTQGVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLA 470
L V SL ++SQA FL + L+
Sbjct: 388 --SEYNLVALLVWFVSLVISFVVSQA------FLLIP----------------SSGLLMT 423
Query: 471 IYVAGLALPHNTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVP 530
I +A LP R ++ P LK VA +Y +L + ++NF++ L+ P
Sbjct: 424 ISMASCFLPLILSRKIHISEPLS--YRLKNVAFLYFSLVSTSLLMINFAMALLIGTLAFP 481
Query: 531 AAA 533
Sbjct: 482 MTF 484
>emb|CAB86709.1| (AL163505) hypothetical protein L3640.14 [Leishmania major]
Length = 464
Score = 274 bits (694), Expect = 4e-72
Identities = 68/388 (17%), Positives = 119/388 (30%), Gaps = 49/388 (12%)
Query: 134 RAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDIIFLVTDHDLLGTE 193
R RS +E + V D +V L AL R + A D+ F +
Sbjct: 75 RGRRSPGSE--IAAVYVNTDY--PASVSLANALIEVIRRRKSLACDVQFYFVNS------ 124
Query: 194 AWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVEGLNGQLPNLDLLN 253
S +AA+ L LS+ + + G NG PN D N
Sbjct: 125 ---------------SEEWPVPQAYTRAALVLNLSTLYNRHICIDTLGGNGIQPNQDYTN 169
Query: 254 L-FQTFCQKGGLLCTLQGKLQPQDWTSLEGPL------QGLQTLLLMVLRQASGRPHGPH 306
+ Q L L + + G + L H +
Sbjct: 170 IAVQLAAANQFLPSYLCQRRHRSTDDAHAGFWHYWAYLEASVQLPTRPQPWHIIPTHSIN 229
Query: 307 GLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFYLLPALS 366
+ + + L +S + + + + LN L E+ H S F +L +L
Sbjct: 230 TI----AISSDPLYSASSVFPHSQLPDAFAQLVLKIIVSLNGLEEKFHHSTFVWLPVSLW 285
Query: 367 RFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQGVGLAS 426
R+V + + + QL + P +P Q G +
Sbjct: 286 RYVEYDHAQFCIILFVASIFSTTYSEY-QLRGISITPLFVTLLLTPVAAAAAFQVAGWWA 344
Query: 427 LTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLA---LPHNTH 483
++S + +L F ++G H + A A+ L ++ GL
Sbjct: 345 -----VVSASAAFSLLFRLLMG-HANSGMLLSFNAIALCLLIILQPACGLVAGAAAAIQV 398
Query: 484 RVVNSQVPDRGWMALKLV---ALIYLAL 508
+++ + +R MA+ AL Y +
Sbjct: 399 SFIHTALQNRPAMAVGAAVSSALAYYFI 426
>ref|NP_491701.1| (NM_059300) F33D11.9a.p [Caenorhabditis elegans]
pir||T32772 hypothetical protein F33D11.9a - Caenorhabditis elegans
gb|AAB96702.1| (AF039720) Hypothetical protein F33D11.9a [Caenorhabditis elegans]
Length = 229
Score = 132 bits (331), Expect = 1e-29
Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 16/123 (13%)
Query: 373 LYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQGVGLASLTAPLL 432
+Y+ L+ L + A W ++ + + P L +G A
Sbjct: 1 MYIIPLTILVSPLVISAYFEWTKIQE--------FQFP---VVHLAFHVLGFFYYIATTY 49
Query: 433 ISQAMG----LALYFLPVLGQHLATQHF-PVAEAEAVVLTLLAIYVAGLALPHNTHRVVN 487
+ Q +G L P +G F P L I + +
Sbjct: 50 VFQTIGTTFVLQWMQWPFVGIDGCDGQFTPSWSLINSFLIFFMIPLGPYVFLKTRSIFRS 109
Query: 488 SQV 490
S +
Sbjct: 110 SVL 112
Score = 89.9 bits (221), Expect = 1e-16
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 514 ALLNFSLGFLLAATMVPAAALAKPHGPRTLY--AALLVVTSPAV---TLFGSLFLWRELL 568
+L+N L F + P L R+++ + L ++ +V ++ +L
Sbjct: 82 SLINSFLIFFMIPLG-PYVFL----KTRSIFRSSVLAILNPISVLAFVAINIPGMFGQL- 135
Query: 569 EVPLSLAEGWQLFLTALA-QGVLEHYTYGALLFPILALGLYPCW-LLFWN 616
P + W ++A + E + F +L YP W +LF
Sbjct: 136 -FPTISQDSWLAAAQSIALTAIREDVEFKVNHFFLLCCFGYPIWNMLFAC 184
>ref|NP_187166.1| (NM_111387) putative sugar transporter [Arabidopsis thaliana]
gb|AAF27021.1|AC009177_11 (AC009177) putative sugar transporter [Arabidopsis thaliana]
Length = 463
Score = 36.1 bits (83), Expect = 1.6
Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 14/151 (9%)
Query: 423 GLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAV---VLTLLAIYVAGLALP 479
+ L+ + + + F +G TQ + E +I G L
Sbjct: 26 WMVYLSTIIAVC----GSYEFGTCVGYSAPTQFGIMEELNLSYSQFSVFGSILNMGAVLG 81
Query: 480 HNTHRVVNSQVPDRGWMALKLV------ALIYLALQLGCIALLNFSLGFLLAATMVPAAA 533
T ++ + +G M L V +IYLA + F G+
Sbjct: 82 AITSGKISDFIGRKGAMRLSSVISAIGWLIIYLAKGDVPLDFGRFLTGYGCGTLSFVVPV 141
Query: 534 LAKPHGPRTLYAALLVVTSPAVTLFGSLFLW 564
PR L AL + + G ++
Sbjct: 142 FIAEISPRKLRGALATLNQLFIV-IGLASMF 171
CPU time: 141.32 user secs. 3.00 sys. secs 144.32 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.315 0.169 0.467
Gapped
Lambda K H
0.270 0.0593 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 329251670
Number of Sequences: 887402
Number of extensions: 13956278
Number of successful extensions: 71168
Number of sequences better than 10.0: 270
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 70937
Number of HSP's gapped (non-prelim): 327
length of query: 621
length of database: 277,845,442
effective HSP length: 55
effective length of query: 566
effective length of database: 229,038,332
effective search space: 129635695912
effective search space used: 129635695912
T: 11
A: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (20.8 bits)
S2: 76 (33.7 bits)