Sequences with E-value BETTER than threshold (0.002) 835 0.0
805 0.0
713 0.0
702 0.0
647 0.0
642 0.0
639 0.0
620 e-176
559 e-158
517 e-145
299 8e-80
185 2e-45
Sequences with E-value WORSE than threshold gb|AAC96071.1| (AF038948) ultraviolet cone visual pigment; rhodo... 39 0.19
emb|CAB99396.1| (AL390355) phosphatidate cytidylyltransferase [S... 37 1.1
Alignments
>ref|NP_034461.1| (NM_010331) GPI anchor attachment protein 1 [Mus musculus]
dbj|BAA82589.1| (AB002136) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Mus musculus]
dbj|BAA82591.1| (AB002138) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Mus musculus]
dbj|BAB03274.1| (AB006970) GPI anchor attachment protein [Mus musculus]
dbj|BAB03275.1| (AB006971) GPI anchor attachment protein [Mus musculus]
gb|AAH06697.1|AAH06697 (BC006697) GPI anchor attachment protein 1 [Mus musculus]
Length = 621
Score = 835 bits (2136), Expect = 0.0
Identities = 567/621 (91%), Positives = 588/621 (94%)
Query: 1 MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV 60
MGLLSDPVRRRALAR+VLRLN PLCVLSYVAGIAWFLAL FPPLTQRTYMSENAMGSTMV
Sbjct: 1 MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMV 60
Query: 61 EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE 120
EEQF GGDRAR+FARDFAAHRKK GALPVAWLER+MRSVGLEVYTQSFSRKLPFPDETHE
Sbjct: 61 EEQFVGGDRARSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHE 120
Query: 121 RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI 180
RYMVSGTNVYGILRAPR+ASTESLVLTVPCG D+TNSQAVGLLLALAAHFRGQIYWAKDI
Sbjct: 121 RYMVSGTNVYGILRAPRSASTESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDI 180
Query: 181 VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE 240
+FLVT+HDLLGTEAWLEAYHD+NVTG+QSSPLQGRAGAIQAAVALELSSDVVTSLDV VE
Sbjct: 181 IFLVTDHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVE 240
Query: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG 300
GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQP+DWTSL+GPLQGLQTLLLMVLRQASG
Sbjct: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASG 300
Query: 301 RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY 360
RPHG HGLFLRY VEALTLRGINSFRQYKYDL VGKALEGMFRKLNHLLERLHQSFF Y
Sbjct: 301 RPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFY 360
Query: 361 LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420
LLP LSRFVSIGLYMPA GFLLLVLGLKALELWMQLH+AG+ EE G AP P PL P+Q
Sbjct: 361 LLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQ 420
Query: 421 GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH 480
GVGLASL APLLISQAMGLALY LPVLGQH+ATQHFPVAEAEAVVLTLLAIY AGLALPH
Sbjct: 421 GVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPH 480
Query: 481 NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP 540
NTHRVV++Q PDRGWMALKLVALIYLALQLGCIAL NFSLGFLLA TMVP AALAKPHGP
Sbjct: 481 NTHRVVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGP 540
Query: 541 RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF 600
RTLYAALLV+TSPA TL GSLFLWREL E PLSLAEGWQLFL ALAQGVLEH+TYGALLF
Sbjct: 541 RTLYAALLVVTSPAVTLFGSLFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLF 600
Query: 601 PLLSLGLYPCWLLFWNVLFWK 621
P+L+LGLYPCWLLFWNVLFWK
Sbjct: 601 PILALGLYPCWLLFWNVLFWK 621
>ref|NP_003792.1| (NM_003801) anchor attachment protein 1; anchor attachment protein
1 (Gaa1p, yeast) homolog; glycophosphatidylinositol
anchor attachment 1 [Homo sapiens]
dbj|BAA24035.1| (AB006969) hGAA1 [Homo sapiens]
dbj|BAA82588.1| (AB002135) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Homo sapiens]
dbj|BAA82590.1| (AB002137) glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
[Homo sapiens]
gb|AAH03171.1|AAH03171 (BC003171) anchor attachment protein 1 (Gaa1p, yeast) homolog [Homo
sapiens]
gb|AAH04129.1|AAH04129 (BC004129) anchor attachment protein 1 (Gaa1p, yeast) homolog [Homo
sapiens]
Length = 621
Score = 805 bits (2059), Expect = 0.0
Identities = 621/621 (100%), Positives = 621/621 (100%)
Query: 1 MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV 60
MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV
Sbjct: 1 MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV 60
Query: 61 EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE 120
EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE
Sbjct: 61 EEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHE 120
Query: 121 RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI 180
RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI
Sbjct: 121 RYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDI 180
Query: 181 VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE 240
VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE
Sbjct: 181 VFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVE 240
Query: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG 300
GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG
Sbjct: 241 GLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASG 300
Query: 301 RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY 360
RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY
Sbjct: 301 RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLY 360
Query: 361 LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420
LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ
Sbjct: 361 LLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ 420
Query: 421 GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH 480
GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH
Sbjct: 421 GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPH 480
Query: 481 NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP 540
NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP
Sbjct: 481 NTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGP 540
Query: 541 RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF 600
RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF
Sbjct: 541 RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLF 600
Query: 601 PLLSLGLYPCWLLFWNVLFWK 621
PLLSLGLYPCWLLFWNVLFWK
Sbjct: 601 PLLSLGLYPCWLLFWNVLFWK 621
>gb|AAF46094.1| (AE003435) CG3033 gene product [Drosophila melanogaster]
Length = 674
Score = 713 bits (1822), Expect = 0.0
Identities = 220/662 (33%), Positives = 311/662 (46%), Gaps = 64/662 (9%)
Query: 1 MGLLSDP--VRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGST 58
MGLLSDP + L + R +C YVAG+AWF L P TY+SENA+
Sbjct: 1 MGLLSDPSISTQSKLVDGLARHVRKVCYALYVAGVAWFFCLALPEFNHGTYLSENALSPG 60
Query: 59 MVEE--QFAGGDRARAFARDFAAHRKKS-GALPVAWLERTMRSVGLEVYTQSFSRKLPF- 114
+V + A + RK P AW+ M GLE +T +++ + PF
Sbjct: 61 LVYPEIRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMNEFGLETHTHNYTLRYPFG 120
Query: 115 -PDETHERYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTN----SQAVGLLLALAAH 169
E H G N+YGILRAPR ASTE +V P + S+ S +V LLLA A
Sbjct: 121 GGKEYH------GKNIYGILRAPRIASTEGIVFAAPYRAASSVHTDISASVPLLLAFADF 174
Query: 170 FRGQIYWAKDIVFLVTEHDLLGTEAWLEAYH------DVNVTGMQSSPLQGRAGAIQAAV 223
R + YWAKD++FL+TE + LG +AWLEAYH D++ ++ L RAG++QAA+
Sbjct: 175 ARRKNYWAKDLIFLITEQEQLGMQAWLEAYHDGDRELDLSKAYLRPGNLPARAGSLQAAL 234
Query: 224 ALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGP 283
+E+ + +DV +EGLNG+LPNLD+ NL Q + G+ + + + S
Sbjct: 235 NIEVQDLEIDHVDVRIEGLNGKLPNLDMFNLVQRIMAREGIASGYKQAPRKKRRHSQSHF 294
Query: 284 LQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTL----RGINSFRQYKYDLVAVG--K 337
Q + +L M+ Q+SG P G+HGLF RYR++ALT+ R ++ + AV K
Sbjct: 295 EQNFRQMLTMLASQSSGVPTGNHGLFHRYRIDALTIAANRRATHATLKGSPGSAAVPLLK 354
Query: 338 ALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLH 397
A+EG+ R LN+LLER HQSFF Y++ R++SIG YMPA+ L+ LKA W L
Sbjct: 355 AIEGIARSLNNLLERFHQSFFFYVIVSNDRYISIGDYMPALVALVACAFLKAYLTWSTLP 414
Query: 398 EAGMGLEEPGG-------APGPSVPLPPSQ-----GVGLASLVAPLLISQAMGLALYVLP 445
LE+ G L P + G L L A LLI G VLP
Sbjct: 415 ATNAELEKAAGWLREHEQEAELEENLEPDKFELPYGSVLIYLTATLLI----GFLCNVLP 470
Query: 446 VLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIY 505
L Q+ A VL+ L+ G LP P G L + L+
Sbjct: 471 -LQQYFLEIPMGAAPLTTSVLSFLS--LIGFVLP------FVVVLPPGGLELLHVAFLLI 521
Query: 506 LALQLGCIALTNFSLGFLLATTMVP--TAALAKPHGPR-----TLYAALLVLTSPAATLL 558
L I L NF+LG A VP A K R T+ A LV+ +
Sbjct: 522 YGCALIVIGLLNFALGLFAAVLTVPLVIALETKEENSRSTLRNTIRLATLVMNPMMVVYV 581
Query: 559 GSLFL-WRELQEAPL--SLAEGWQLFLAALAQGVLEHHTYGALLFPLLSLGLYPCWLLFW 615
L + + + E P+ + + A A G+++ YG L+ ++ P W++ W
Sbjct: 582 IVLAMTFYQFPELPVQKIMLRAATAAMDASAYGLIDSVIYGNWLYFVICTIFLPLWIICW 641
Query: 616 NV 617
+
Sbjct: 642 TL 643
>ref|NP_491700.1| (NM_059299) F33D11.9b.p [Caenorhabditis elegans]
gb|AAK68360.1|AF039720_13 (AF039720) Hypothetical protein F33D11.9b [Caenorhabditis elegans]
Length = 670
Score = 702 bits (1794), Expect = 0.0
Identities = 144/641 (22%), Positives = 253/641 (39%), Gaps = 75/641 (11%)
Query: 9 RRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGD 68
R + +L+ +++Y+ L P + T +SE+++ +V +F
Sbjct: 28 TRPKILDKILKFRKVALIIAYIGAYLSAQWLFDPVNMEVTRISEHSLMPGLVTPKFDKSG 87
Query: 69 RARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTN 128
A R F+ K + + +GLE +T + K+ ++G N
Sbjct: 88 IAIQLYRRFSDLPKSKSQQEL--IHTIFSDLGLECFTHKWRSKVAGNP-------MNGEN 138
Query: 129 VYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVFLVT--- 185
VYG +R PR E+ ++ V G + + + +LA + + Q+YWA+DIV +
Sbjct: 139 VYGFIRGPRNDGAEAQMIVVQLGRSEKSRRMMSRMLAFVDYAKDQVYWARDIVIVFVDGG 198
Query: 186 ------EHDLLGTEAWLEAYHDVNVTGMQSS------PLQGRAGAIQAAVALELSSDVVT 233
E +A+L Y + + S +Q + GA+ V +LS V
Sbjct: 199 EKNDSIEKAAFALDAFLLKYQKIEALNSKKSITVEADEIQAQTGALIGGVVYDLSGMAVK 258
Query: 234 S---LDVAVEGLNGQLPNLDLLNLFQTFC-----QKGGLLCTLQGKLQP-EDWTSLDGPL 284
+++ GLNGQ NLD+ N + + TL P +++ P+
Sbjct: 259 GQHIVNIQTNGLNGQQVNLDVFNGITKIADSKHHSRVAIFGTLHRHSNPYMEYSPFIVPM 318
Query: 285 QGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFR 344
+ L T QA G H + +Y V+ LT+ + Y G+ +E + R
Sbjct: 319 RALYT-------QAFISIEGIHSVLGKYGVQGLTVG-----LSHDYSEKQTGQFIEEVSR 366
Query: 345 KLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLE 404
LN++LERLHQS+F+Y+L F SI +Y+ + L+ L + A W ++ E
Sbjct: 367 MLNNVLERLHQSYFMYVLADDLHFSSIAMYIIPLTILVSPLVISAYFEWTKIQEFQF--- 423
Query: 405 EPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAV 464
P V L +G +A + Q +G VL +
Sbjct: 424 -------PVVHLA-FHVLGFFYYIATTYVFQTIGTTF-VLQWMQWPFVGID-GCDGQFTP 473
Query: 465 VLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLL 524
+L+ + +P + V + P R ++++V L+ +L L I LTNF L L
Sbjct: 474 SWSLINSFLIFFMIPLGPY--VFLKEPVRCVPSMRIVCLLETSLVLYGICLTNFGLAILC 531
Query: 525 ATTMVPTAALAKPHGPRTLY--AALLVLTSPAATLLGS---LFLWRELQEAPLSLAEGWQ 579
+VP L R+++ + L +L + + ++ +L P + W
Sbjct: 532 TAFVVPIVFL---MTTRSIFRSSVLAILNPISVLAFVAINIPGMFGQL--FPTISQDSWL 586
Query: 580 LFLAALAQGVL-EHHTYGALLFPLLSLGLYPCWLLFWNVLF 619
++A + E + F LL YP WN+LF
Sbjct: 587 AAAQSIALTAIREDVEFKVNHFFLLCCFGYPI----WNMLF 623
>pir||T46923 hypothetical protein DKFZp434E1512.1 - human
emb|CAB75660.1| (AL157437) hypothetical protein [Homo sapiens]
gb|AAH06383.1|AAH06383 (BC006383) Unknown (protein for MGC:12663) [Homo sapiens]
Length = 499
Score = 647 bits (1652), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 123 MVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVF 182
MVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVF
Sbjct: 1 MVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVF 60
Query: 183 LVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGL 242
LVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGL
Sbjct: 61 LVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGL 120
Query: 243 NGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASGRP 302
NGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASGRP
Sbjct: 121 NGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASGRP 180
Query: 303 HGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLL 362
HGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLL
Sbjct: 181 HGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLL 240
Query: 363 PGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQGV 422
PGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQGV
Sbjct: 241 PGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQGV 300
Query: 423 GLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNT 482
GLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNT
Sbjct: 301 GLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNT 360
Query: 483 HRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRT 542
HRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRT
Sbjct: 361 HRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRT 420
Query: 543 LYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPL 602
LYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPL
Sbjct: 421 LYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPL 480
Query: 603 LSLGLYPCWLLFWNVLFWK 621
LSLGLYPCWLLFWNVLFWK
Sbjct: 481 LSLGLYPCWLLFWNVLFWK 499
>pir||T32771 hypothetical protein F33D11.9b - Caenorhabditis elegans
Length = 885
Score = 642 bits (1639), Expect = 0.0
Identities = 129/641 (20%), Positives = 230/641 (35%), Gaps = 122/641 (19%)
Query: 9 RRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGD 68
R + +L+ +++Y+ L P + T +SE+++ +V +F
Sbjct: 290 TRPKILDKILKFRKVALIIAYIGAYLSAQWLFDPVNMEVTRISEHSLMPGLVTPKFDKSG 349
Query: 69 RARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTN 128
A R F+ K + + +GLE +T + K+ ++G N
Sbjct: 350 IAIQLYRRFSDLPKSKSQQEL--IHTIFSDLGLECFTHKWRSKVAGNP-------MNGEN 400
Query: 129 VYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVFLVT--- 185
VYG +R PR E+ ++ V G + + + +LA + + Q+YWA+DIV +
Sbjct: 401 VYGFIRGPRNDGAEAQMIVVQLGRSEKSRRMMSRMLAFVDYAKDQVYWARDIVIVFVDGG 460
Query: 186 ------EHDLLGTEAWLEAYHDVNVTGMQSS------PLQGRAGAIQAAVALELSSDVVT 233
E +A+L Y + + S +Q + GA+ V +LS V
Sbjct: 461 EKNDSIEKAAFALDAFLLKYQKIEALNSKKSITVEADEIQAQTGALIGGVVYDLSGMAVK 520
Query: 234 S---LDVAVEGLNGQLPNLDLLNLFQTFC-----QKGGLLCTLQGKLQP-EDWTSLDGPL 284
+++ GLNGQ NLD+ N + + TL P +++ P+
Sbjct: 521 GQHIVNIQTNGLNGQQVNLDVFNGITKIADSKHHSRVAIFGTLHRHSNPYMEYSPFIVPM 580
Query: 285 QGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFR 344
+ L T QA G H + +Y V+ LT+ + Y G+ +E + R
Sbjct: 581 RALYT-------QAFISIEGIHSVLGKYGVQGLTVG-----LSHDYSEKQTGQFIEEVSR 628
Query: 345 KLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLE 404
LN++LERLHQS+F+Y+L F SI +Y+ + L+ L + A W ++ E
Sbjct: 629 MLNNVLERLHQSYFMYVLADDLHFSSIAMYIIPLTILVSPLVISAYFEWTKIQEFQF--- 685
Query: 405 EPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAV 464
P V L +G +A + Q +G VL +
Sbjct: 686 -------PVVHLA-FHVLGFFYYIATTYVFQTIGTTF-VLQWMQWPFVGID-GCDGQFTP 735
Query: 465 VLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLL 524
+L+ + +P + V L
Sbjct: 736 SWSLINSFLIFFMIPLGPY-----------------VFL--------------------- 757
Query: 525 ATTMVPTAALAKPHGPRTLY--AALLVLTSPAATLLGS---LFLWRELQEAPLSLAEGWQ 579
R+++ + L +L + + ++ +L P + W
Sbjct: 758 --------------KTRSIFRSSVLAILNPISVLAFVAINIPGMFGQL--FPTISQDSWL 801
Query: 580 LFLAALAQGVL-EHHTYGALLFPLLSLGLYPCWLLFWNVLF 619
++A + E + F LL YP WN+LF
Sbjct: 802 AAAQSIALTAIREDVEFKVNHFFLLCCFGYPI----WNMLF 838
>ref|NP_572273.1| (NM_132045) CG3033 gene product [Drosophila melanogaster]
gb|AAK77275.1| (AY047543) GH05723p [Drosophila melanogaster]
Length = 561
Score = 639 bits (1632), Expect = 0.0
Identities = 203/577 (35%), Positives = 276/577 (47%), Gaps = 56/577 (9%)
Query: 1 MGLLSDP--VRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGST 58
MGLLSDP + L + R +C YVAG+AWF L P TY+SENA+
Sbjct: 1 MGLLSDPSISTQSKLVDGLARHVRKVCYALYVAGVAWFFCLALPEFNHGTYLSENALSPG 60
Query: 59 MVEE--QFAGGDRARAFARDFAAHRKKS-GALPVAWLERTMRSVGLEVYTQSFSRKLPF- 114
+V + A + RK P AW+ M GLE +T +++ + PF
Sbjct: 61 LVYPEIRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMNEFGLETHTHNYTLRYPFG 120
Query: 115 -PDETHERYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTN----SQAVGLLLALAAH 169
E H G N+YGILRAPR ASTE +V P + S+ S +V LLLA A
Sbjct: 121 GGKEYH------GKNIYGILRAPRIASTEGIVFAAPYRAASSVHTDISASVPLLLAFADF 174
Query: 170 FRGQIYWAKDIVFLVTEHDLLGTEAWLEAYH------DVNVTGMQSSPLQGRAGAIQAAV 223
R + YWAKD++FL+TE + LG +AWLEAYH D++ ++ L RAG++QAA+
Sbjct: 175 ARRKNYWAKDLIFLITEQEQLGMQAWLEAYHDGDRELDLSKAYLRPGNLPARAGSLQAAL 234
Query: 224 ALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGP 283
+E+ + +DV +EGLNG+LPNLD+ NL Q + G+ + + + S
Sbjct: 235 NIEVQDLEIDHVDVRIEGLNGKLPNLDMFNLVQRIMAREGIASGYKQAPRKKRRHSQSHF 294
Query: 284 LQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTL----RGINSFRQYKYDLVAVG--K 337
Q + +L M+ Q+SG P G+HGLF RYR++ALT+ R ++ + AV K
Sbjct: 295 EQNFRQMLTMLASQSSGVPTGNHGLFHRYRIDALTIAANRRATHATLKGSPGSAAVPLLK 354
Query: 338 ALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLH 397
A+EG+ R LN+LLER HQSFF Y++ R++SIG YMPA+ L+ LKA W L
Sbjct: 355 AIEGIARSLNNLLERFHQSFFFYVIVSNDRYISIGDYMPALVALVACAFLKAYLTWSTLP 414
Query: 398 EAGMGLEEPGG-------APGPSVPLPPSQ-----GVGLASLVAPLLISQAMGLALYVLP 445
LE+ G L P + G L L A LLI G VLP
Sbjct: 415 ATNAELEKAAGWLREHEQEAELEENLEPDKFELPYGSVLIYLTATLLI----GFLCNVLP 470
Query: 446 VLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIY 505
L Q+ A VL+ L+ G LP P G L + L+
Sbjct: 471 -LQQYFLEIPMGAAPLTTSVLSFLS--LIGFVLP------FVVVLPPGGLELLHVAFLLI 521
Query: 506 LALQLGCIALTNFSLGFLLATTMVP--TAALAKPHGP 540
L I L NF+LG A VP A K
Sbjct: 522 YGCALIVIGLLNFALGLFAAVLTVPLVIALETKEENS 558
>ref|NP_197414.1| (NM_121918) GPAA1 - like protein [Arabidopsis thaliana]
Length = 696
Score = 620 bits (1584), Expect = e-176
Identities = 176/696 (25%), Positives = 279/696 (39%), Gaps = 101/696 (14%)
Query: 5 SDPVRRRALARLVLRLNAPLCVLSYV-AGIAWFLALVFPPLTQRTYMSENAMGSTMVEEQ 63
S ++ R + RL + L A V S V + L+ P L + TY+SENA+
Sbjct: 18 SPKIKPRPIVRLGIFLIAHSPVFSVVFSAAGVLALLLLPLLAKNTYISENALMPGSARSM 77
Query: 64 FAGGDRARA--FARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHER 121
+ D + +D R + + M +G EV Q F P ++ H
Sbjct: 78 LSNRDVSDGSKLVKDIKNFRLNHEGQVQKLIGKYMSDMGAEVSYQKFH---PEGNQFHPL 134
Query: 122 YMVS----------------GTNVYGILRAPRAASTESLVLTVPC----GSDSTNSQAVG 161
+ S G NV GI+RAPR ES+VL P G D + ++G
Sbjct: 135 HFFSGPDSYTLLENVSCASYGVNVAGIIRAPRGDGKESIVLVTPYDFINGGDYED-LSLG 193
Query: 162 LLLALAAHFRGQIYWAKDIVFLVTEH---DLLGTEAWLEAYH--DVNVTGMQSSPLQG-- 214
++ +L + + +KDI++LV + D AWL YH V+ + Q
Sbjct: 194 IVSSLFSLLSRVTWLSKDIIWLVADSRYGDYRPVAAWLTEYHSPSFKVSDLLKCDEQNTA 253
Query: 215 ----RAGAIQAAVALEL---SSDVVTSLDVAVEGLNGQLPNLDLLNLF------------ 255
RAG + AA+ L++ S +L + E NGQ+PNLDL+N+
Sbjct: 254 DNFRRAGTMAAALVLKVDGRSEKFEDTLSIYAEASNGQMPNLDLINVVNYLAVHRQGFYV 313
Query: 256 --------------QTFCQKGGLLCTLQGKLQPEDWT---SLDGPLQGLQTLLLMVLRQA 298
+ F + + L L P DW L+G TL + QA
Sbjct: 314 KVEKVVSLLSSSWLKIFGEIFEAVGKLAHMLNP-DWNFGIPAADYLEGSATLASSLYSQA 372
Query: 299 SGRPHGSHGLFLRYRVEALTLRGINSF------RQYKYDLVAVGKALEGMFRKLNHLLER 352
G P G HG F Y+V+A+TL+ F RQ+ + L + LEG R +N+LLE+
Sbjct: 373 LGIPTGPHGAFRDYQVDAITLKVSPRFPPDSKTRQHDFFLRG-ARLLEGTIRSVNNLLEK 431
Query: 353 LHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGP 412
HQSFFLY+L S+F+S+G+YM A L+ L + A L++ ++ P
Sbjct: 432 FHQSFFLYMLTSPSKFISVGVYMIAFALLVAPLPMVAASLYIDGCKS-----LTNSTHNP 486
Query: 413 SVPLPPSQGVGLASLVAPLLISQAMGLALYVLP-----VLGQHVATQHFPVAEAEAVVLT 467
+ + + A V L +G + +LP V GQH T + + L
Sbjct: 487 TENFKSWKWLDAAKQVFTL---HLLGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLL 543
Query: 468 LLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATT 527
L+ P S++ W LK V + + L +++ NF+ + A
Sbjct: 544 LITFVTMPGCSP------FSSRLHGTNWAILKSVTISAAFIGLCLMSIINFATAEIGALL 597
Query: 528 MVPTAALAKPHGP----RTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLA 583
+VPT +A+P P R L + L S +G ++ + + L
Sbjct: 598 LVPTCLMAQPIKPALRSRRLKSLLGAFCSIVLLTIGFPVMFFAISKGLLGEGLVGLSLGG 657
Query: 584 ALAQGVLEHHTYGALLFPLLSLGLYPCWLLFWNVLF 619
+ + + + + + PCWLL +LF
Sbjct: 658 EFWTWLESLWAWKSATYLYIGMVHLPCWLLCLCILF 693
>emb|CAB65611.1| (AL136078) putative glycosylphosphatidylinositol anchor attachment
protein [Schizosaccharomyces pombe]
Length = 581
Score = 559 bits (1427), Expect = e-158
Identities = 156/610 (25%), Positives = 257/610 (41%), Gaps = 81/610 (13%)
Query: 14 ARLVLRLNAPLCVL---SYVAGIAWFLALVFPPLTQRTYMSENAMGSTMV----EEQFAG 66
R+ L L L + G++W L + R ++SE+A+ V E +++
Sbjct: 9 IRVFPFLQRHLFFLQLSLTLIGLSWIFILPRNEIIDRLHVSESALLPGQVNTYFENRYSK 68
Query: 67 GDRARAFARDFAAHRKKSGALPVAW--LERTMRSVGLEVYTQSFSRKLPFPDETHERYMV 124
+ A + +H S + LE+ ++GL Q++S +P +
Sbjct: 69 TVSSSLTAANTWSHLDASVGTNTMYDDLEQIFTAMGLPTQKQNYSINIPGSE-------F 121
Query: 125 SGTNVYGILRAPRAASTESLVLTVPCGSD--STNSQAVGLLLALAAHFRGQIYWAKDIVF 182
+G+N LRAPR +TESL+L VP N V L ++L +F+G W+KDI+
Sbjct: 122 NGSNFITTLRAPRGDATESLLLCVPWKDHIGQYNEAGVALAISLLKYFQGWSLWSKDIIL 181
Query: 183 LVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALEL--SSDVVTSLDVAVE 240
++ + + G ++L +Y D + +PL+ R+G+IQA ++LEL + + L+V +
Sbjct: 182 VIFDDPVYGPSSFLTSYFDQTTPYISYTPLKIRSGSIQAGLSLELVTTENNSDVLEVLYQ 241
Query: 241 GLNGQLPNLDLLN-LFQTFCQKGGLLCTLQGKLQPEDWTSLDG--PLQGLQTLLLMVLRQ 297
NGQLPNLDL N + + F Q LQG D+ + G L++L + +L Q
Sbjct: 242 ATNGQLPNLDLFNTISRIFMQHFNYPLRLQGY----DFHANSGSSYTSRLKSLWMGMLTQ 297
Query: 298 ASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSF 357
A +H LF +YR++ LTLR + + +D+ G+A+E FR LN+LLE LHQSF
Sbjct: 298 AVSNVTSAHALFPQYRIDMLTLR-MKVKDPFSFDMFRFGQAIESTFRSLNNLLEHLHQSF 356
Query: 358 FLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLP 417
F Y + F+SIG YMP++ L L A W+ HE + L P
Sbjct: 357 FFYFILDHLHFISIGNYMPSILILAASFMLGAYRHWIN-HEKKIDLWRPFSFWL----FS 411
Query: 418 PSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLA 477
+ LV+ +L +G +T + A L
Sbjct: 412 IFCTIAAYYLVSSSTKITVFIFLYLMLTFIGIIFST--------------FMTSEDAELV 457
Query: 478 LPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKP 537
L ++ +L + ++ NFSL F++A +VP ++
Sbjct: 458 LSYDLMSK---------------------SLFISVVSTLNFSLSFVVAILLVPLQFISFR 496
Query: 538 HGPRTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGA 597
R L VLT + L ++ PL E+ + +
Sbjct: 497 FN-RRLSLLFAVLTYFS--TFIFLCSLSKILNGPLV----------PFWLWAKEYELFNS 543
Query: 598 LLFPLLSLGL 607
L P + + L
Sbjct: 544 WLMPSVFMIL 553
>ref|NP_013189.1| (NC_001144) ER protein essential for attaching GPI
(glycosylphosphatidylinositol) to protein; Gaa1p
[Saccharomyces cerevisiae]
sp|P39012|GAA1_YEAST GAA1 PROTEIN
pir||S45053 membrane protein END2 - yeast (Saccharomyces cerevisiae)
emb|CAA55944.1| (X79409) Gaa1 [Saccharomyces cerevisiae]
gb|AAB67592.1| (U53880) Gaa1p [Saccharomyces cerevisiae]
emb|CAA97649.1| (Z73260) ORF YLR088w [Saccharomyces cerevisiae]
Length = 614
Score = 517 bits (1318), Expect = e-145
Identities = 148/544 (27%), Positives = 245/544 (44%), Gaps = 71/544 (13%)
Query: 1 MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLT---QRTYMSENAMGS 57
M LL RR LV R+ A L V+S + + F+++ P+ +RTY+SENA+
Sbjct: 1 MALLEKLHRRIVDMGLVPRIIALLPVISMLCALFGFISIAILPMDGQYRRTYISENALMP 60
Query: 58 TMVEEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDE 117
+ F + R + + K + + R+ + + Q F K +
Sbjct: 61 SQAYSYF--RESEWNILRGYRSQIK-----EMVNMTSMERNNLMGSWLQEFGTKTAIYE- 112
Query: 118 THERYMVSGTNVYGILRAPRAASTESLVLTVPC--GSDSTNSQAVGLLLALAAHFRGQIY 175
+E+Y G +YG++ APR TE++VL VP D N L ++LA F
Sbjct: 113 -NEQY---GETLYGVMHAPRGDGTEAMVLAVPWFNSDDEFNIGGAALGVSLARFFSRWPV 168
Query: 176 WAKDIVFLVTEHDLLGTEAWLEAYH-DVNVTGMQSSPLQGRAGAIQAAVALELS--SDVV 232
W+K+I+ + +E+ +W+EAYH +++TG G+I+AAV L+ S D
Sbjct: 169 WSKNIIVVFSENPRAALRSWVEAYHTSLDLTG----------GSIEAAVVLDYSSTEDFF 218
Query: 233 TSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLL 292
++++ +GLNG+LPNLDL+N+ + + G+ +L G P D + + L+ L L
Sbjct: 219 EYVEISYDGLNGELPNLDLVNIAISITEHEGMKVSLHG--LPSDQLTNNNFWSRLKILCL 276
Query: 293 MVLRQASG---RPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHL 349
+ A +PHG+ F +R++++TL+ + +D+ G+ E MFR +N+L
Sbjct: 277 GIRDWALSGVKKPHGNEA-FSGWRIQSVTLK---AHGNSGHDITTFGRIPEAMFRSINNL 332
Query: 350 LERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGA 409
LE+ HQSFF YLL +FVSI Y+P+ L + + +L ++ A + L
Sbjct: 333 LEKFHQSFFFYLLLAPRQFVSISSYLPSAVALSIAFAISSLNAFINNAYANISL------ 386
Query: 410 PGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLL 469
V L L+IS + A ++P G L+
Sbjct: 387 ------FSEYNLVALLVWFVSLVISFVVSQAFLLIPSSG------------------LLM 422
Query: 470 AIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMV 529
I A LP R + P LK VA +Y +L + + NF++ L+ T
Sbjct: 423 TISMASCFLPLILSRKIHISEPLS--YRLKNVAFLYFSLVSTSLLMINFAMALLIGTLAF 480
Query: 530 PTAA 533
P
Sbjct: 481 PMTF 484
>emb|CAB86709.1| (AL163505) hypothetical protein L3640.14 [Leishmania major]
Length = 464
Score = 299 bits (760), Expect = 8e-80
Identities = 54/318 (16%), Positives = 94/318 (28%), Gaps = 40/318 (12%)
Query: 134 RAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVFLVTEHDLLGTE 193
R R+ +E + V +D +V L AL R + A D+ F
Sbjct: 75 RGRRSPGSE--IAAVYVNTDY--PASVSLANALIEVIRRRKSLACDVQFYFVNS------ 124
Query: 194 AWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLN 253
S +AA+ L LS+ + + G NG PN D N
Sbjct: 125 ---------------SEEWPVPQAYTRAALVLNLSTLYNRHICIDTLGGNGIQPNQDYTN 169
Query: 254 LFQTFCQKGGLLCTL---QGKLQPEDWTS-LDGPL---QGLQTLLLMVLRQASGRPHGSH 306
+ L + + +D + + L H +
Sbjct: 170 IAVQLAAANQFLPSYLCQRRHRSTDDAHAGFWHYWAYLEASVQLPTRPQPWHIIPTHSIN 229
Query: 307 GLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLLPGLS 366
+ + + L +S + A + + + LN L E+ H S F++L L
Sbjct: 230 TI----AISSDPLYSASSVFPHSQLPDAFAQLVLKIIVSLNGLEEKFHHSTFVWLPVSLW 285
Query: 367 RFVSIGLYMPAVGFLLLVLGLKALELW----MQLHEAGMGLEEPGGAPGPSVPLPPSQGV 422
R+V + + + + + + + L A + + V
Sbjct: 286 RYVEYDHAQFCIILFVASIFSTTYSEYQLRGISITPLFVTLLLTPVAAAAAFQVAGWWAV 345
Query: 423 GLASLVAPLLISQAMGLA 440
AS LL MG A
Sbjct: 346 VSASAAFSLLFRLLMGHA 363
>ref|NP_491701.1| (NM_059300) F33D11.9a.p [Caenorhabditis elegans]
pir||T32772 hypothetical protein F33D11.9a - Caenorhabditis elegans
gb|AAB96702.1| (AF039720) Hypothetical protein F33D11.9a [Caenorhabditis elegans]
Length = 229
Score = 185 bits (466), Expect = 2e-45
Identities = 36/253 (14%), Positives = 69/253 (27%), Gaps = 77/253 (30%)
Query: 373 LYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQGVGLASLVAPLL 432
+Y+ + L+ L + A W ++ E P V L +G +A
Sbjct: 1 MYIIPLTILVSPLVISAYFEWTKIQEFQF----------PVVHLA-FHVLGFFYYIATTY 49
Query: 433 ISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPD 492
+ Q +G VL + +L+ + +P +
Sbjct: 50 VFQTIGTTF-VLQWMQWPFVGID-GCDGQFTPSWSLINSFLIFFMIPLGPY--------- 98
Query: 493 RGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRTLY--AALLVL 550
V L R+++ + L +L
Sbjct: 99 --------VFL-----------------------------------KTRSIFRSSVLAIL 115
Query: 551 TSPAATLLGS---LFLWRELQEAPLSLAEGWQLFLAALAQGVL-EHHTYGALLFPLLSLG 606
+ + ++ +L P + W ++A + E + F LL
Sbjct: 116 NPISVLAFVAINIPGMFGQL--FPTISQDSWLAAAQSIALTAIREDVEFKVNHFFLLCCF 173
Query: 607 LYPCWLLFWNVLF 619
YP WN+LF
Sbjct: 174 GYPI----WNMLF 182
>gb|AAC96071.1| (AF038948) ultraviolet cone visual pigment; rhodopsin [Ambystoma
tigrinum]
Length = 347
Score = 39.2 bits (91), Expect = 0.19
Identities = 34/211 (16%), Positives = 59/211 (27%), Gaps = 21/211 (9%)
Query: 412 PSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAV-VLTLLA 470
P + P+ A MG +V L V + L+
Sbjct: 22 PQYHIAPAWT--FYFQTA------FMGFVFFVGTPLNAIVLIVTVKYKKLRQPLNYILVN 73
Query: 471 IYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVP 530
+ AG + V + ++ K + + L +T +SL FL +
Sbjct: 74 VSLAGFTFCIFSVFTVFVSSSQGYFIFGKTICELEAFLGSVSGLVTGWSLAFLAIERYIV 133
Query: 531 TAALAKPHGPRTLYAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGV- 589
KP G + + A +G L + EG Q V
Sbjct: 134 IC---KPMGSFRFSSKHATMVVLATWAIGFSVSIGPLVGWSRYIPEGLQCSCGPDWYTVG 190
Query: 590 ----LEHHTYGALLFPLLSLGLYPCWLLFWN 616
E +T+ F + + P L+ +
Sbjct: 191 TKYNSETYTW----FLFIFCFIIPLSLICFC 217
>emb|CAB99396.1| (AL390355) phosphatidate cytidylyltransferase [Schizosaccharomyces
pombe]
Length = 439
Score = 36.9 bits (85), Expect = 1.1
Identities = 26/163 (15%), Positives = 44/163 (26%), Gaps = 12/163 (7%)
Query: 353 LHQSF----FLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKAL-ELWMQLHEAGMGLEEPG 407
H F F+ L RF+S LY+ + L + Q M L
Sbjct: 132 FHHLFIMDSFMLPLVLHHRFISFMLYIIGFVLFVASLKKGNYKFQFSQFCWTHMTLLLVV 191
Query: 408 GAPGPSVP--LPP--SQGVGLASLVAPLLISQAMGLAL---YVLPVLGQHVATQHFPVAE 460
G + V + +V + + G ++ V +
Sbjct: 192 GQSHFMINNLFEGLFWFFVPVCYVVCNDVFAYLCGKMFGKHPLIQVSPKKTVEGFLGGWI 251
Query: 461 AEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVAL 503
V+ +L++ R +ST A V L
Sbjct: 252 CTVVIGSLISYVLMHFKYFICPTRDLSTSAFSGLNCTPNSVFL 294
CPU time: 152.42 user secs. 2.65 sys. secs 155.07 total secs.
Database: nr
Posted date: Apr 21, 2002 2:19 PM
Number of letters in database: 277,845,442
Number of sequences in database: 887,402
Lambda K H
0.316 0.172 0.471
Gapped
Lambda K H
0.270 0.0604 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357721767
Number of Sequences: 887402
Number of extensions: 16382795
Number of successful extensions: 75236
Number of sequences better than 10.0: 499
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 489
Number of HSP's that attempted gapping in prelim test: 74866
Number of HSP's gapped (non-prelim): 670
length of query: 621
length of database: 277,845,442
effective HSP length: 56
effective length of query: 565
effective length of database: 228,150,930
effective search space: 128905275450
effective search space used: 128905275450
T: 11
A: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (20.8 bits)
S2: 76 (33.7 bits)
