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TEM domain structure |
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TEM Sequence Analysis |
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name | from | to | source/E | description |
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LCR | 1 | 36 | SEG | Proline-rich. Blastp and conclusions derived from the potential Takifugu orthologue hint on the possibility that poly-proline FH1 is to be expected in the further N-terminus. |
FH2 | 36 | 467 | PFAM, E = 8.9e-143 | The region is highly alpha-helical in composition (93.7 %) with reliable coiled coils predicted for 345-372, 394-426. FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. A proline-rich FH1 domain usually found N-terminally of FH2 mediates these interactions. |
500 |
Remarks |
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Sequence Information |
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TEM | TEM21_2 | ||||||
Reliability of Gen2Tag mapping |
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Analysis |
SIMILAR GENES in: C. elegans, Fugu rubripes, H. sapiens, M. musculus, S.cerevisiae |
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Protein Description |
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Protein Sequence |
LPPPPDKCPPAPPLPGAAPSVVLTVPPGLSAIRIKKPPPIKTKFRLPVFNWTALKPNQIPSGTVFSELDD EKILEDKFEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANRAKNLAITLRKAGRSAEEICRAIHTF DLQTLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQD NLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKMTL LHFIALTVKEKYPDLANFWHELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIHDNSVLRNFLSTNE GKLDKLQRDAKTAEEAYNAVVRYFGESPKTTPPSVFFPVFVRFIRSYKEAEQENEARKKQEEVMREKQLA QEAKKLDAKTPSQRNKWQQQELIAELRRRQAKEHRPVYEGKDGTIEDIITVLKSVPFTARTAKRGSRFFC DAAHHDESNC |
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SAGE-Tag | CATG-TACCACCTCCC | ||||||
EST/cluster Description |
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EST/cluster Sequence |
GATAAGTTTGAAGAATTATTCAAGACAAAAGCGCAGGGCCCTGCCCTTGACCTCATCTGCTCCAAAAACA AGACAGCGCAAAAAGCTGCCAGCAAGGTGACTCTGTTGGAAGCCAATCGTGCCAAGAACCTGGCCATCAC CCTACGCAAGGCTGGCCGCTCGGCTGAGGAGATCTGCAGGGCCATTCATACGTTTGACTTGCAGACACTA CCTGTGGACTTCGTGGAGTGCCTGATGCGCTTCCTGCCCACAGAGGCTGAGGTAAAGCTGCTGCGGCAAT ATGAGCGGGAGCGGCAGCCCCTGGAGGAGTTGGCAGCTGAGGACCGCTTCATGCTGCTCTTCAGCAAGGT GGAACGGTTGACCCAGCGAATGGCTGGCATGGCCTTCCTGGGGAACTTCCAGGATAACCTGCAGATGCTC ACACCGCAACTCAATGCCATCATTGCGGCGTCCGCTTCCGTCAAGTCTTCACAGAAGCTGAAGCAGATGT TGGAGATCATACTTGCACTGGGGAACTACATGAACAGCAGCAAGCGGGGAGCTGTGTATGGCTTCAAGCT CCAGAGCCTGGATCTGCTGCTGGATACCAAGTCCACTGACCGGAAGATGACACTGCTTCATTTCATCGCC TTGACAGTGAAGGAGAAATACCCAGACCTGGCTAACTTCTGGCATGAGCTGCACTTTGTTGAGAAGGCTG CAGCAGTGTCCCTGGAGAACGTGCTGCTGGACGTGAAGGAGCTGGGCCGGGGCATGGAGCTGATTCGGCG TGAGTGCAGCATCCATGACAACAGCGTCCTCCGGAACTTCCTCAGTACCAATGAAGGCAAACTAGACAAG CTCCAGCGGGACGCCAAGACGGCTGAGGAGGCCTACAATGCAGTTGTGCGCTACTTTGGCGAGAGTCCCA AGACTACACCTCCTTCTGTATTCTTCCCAGTATTTGTCCGATTCATTCGTTCTTACAAGGAAGCAGAACA AGAGAATGAAGCCCGCAAGAAGCAGGAGGAGGTAATGCGGGAGAAGCAGCTGGCTCAGGAAGCCAAGAAA CTGGATGCCAAGACCCCATCCCAGCGGAACAAGTGGCAACAGCAGGAGTTAATAGCAGAGTTGAGGCGGC GCCAGGCCAAGGAACACCGGCCTGTTTATGAGGGGAAGGATGGTACCATCGAGGACATCATCACAGTGCT GAAGAGTGTCCCTTTCACGGCCCGTACTGCCAAGCGGGGCTCACGCTTCTTCTGTGATGCAGCCCACCAT GATGAGTCAAACTGTTAGCCCCCAAGGTTGGGGCCCGACAGGCCTCCACTGCCAGCCTATGGTTGTTCGC CACCAAGCCAGGAGTGCTGCACCGCCCAGTGGTCCCCCTCGGGCTCCAGGCCCCCACTGAGACCCTCTCG GAGGCAGAAGCACTTCACCCCTCAGAGTCCTACAAGTCCAACCAGTGGACCTGGAATTGGCCAAGGGCTC AGGAGAGGGCTGTGTTGCTCTCTCAACCATGTCCGCCCCAGCTCTTGAGGCTGGATCTTTCTACTTGTGC CACTATGGGCACTAGGTCTGTAGGTCCCTGGTGCTTCCAGTACTGCACTTTGCCCCCAAGGTCTTTGACT TCATTTCCTGAAGGGTCACCAAGGGTCAGCTCAGGGCTAGGAAAAACCATTTCCAGCCTTAGCCTAAACA GGGCACATAGATCTCTCCCACTAGAGCCCAGAGGGATGAGAGGAGAGAGCAACTGTTCTTTCTTTTTTTT TCCCTTCCTTTTTGCAGGCCCATGGTCAGCTCTGGTCTAGATGTATCTAGGCTTAGGGAGCCCTGGGACC CTGCCAGTCTCAGTTCATCTCTTACCAGGAGCAAGGCCCTCTGAAGCATGGGCCGTGCCAGCTGTGCCCT AGTGATAAGGGTAAGAGGAGAGATGTCAGGCTCACTGCCCTTATTTCTCTGCCCATTTCATTCTAGGCTC ACACTGTCCTTGTCAAGGTGGGCAGAAGAGCAGAGGTCTTCTCTGCACCAACCACTCTCTGCAGATGGCT GGAGAAAGGGTGTGCCAACTCTTCACCTTCTTTCCTCAGCTACGGTTTTTTTTTTTTTTTTTTTTTTTGG CAGGGGACAAGGAGCATGGTGGTCTTGGCTATTTGCTTACCTTCCCGTTTCTCCTCTGCCCCTGGAAGGG AATGTGGGGGCCCACTTTTTTGTACATGTACCACCTCCCTTTCCTCTTACTGTACATAAACCTCAGACTC TCCCCCTCTCAACAAAGGCTTGATGCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCC |
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Genomic Sequence Description | chromosome 12 working draft sequence segment | ||||||
Genomic Sequence |
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Literature |
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PubMed: 20414696 | FRL, a novel formin-related protein, binds to Rac and regulates cell motility and survival of macrophages. Yayoshi-Yamamoto S, Taniuchi I, Watanabe T. Mol Cell Biol 2000 Sep;20(18):6872-81 |
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