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BLASTN against ESTDB 

BLASTN 2.1.1 [Aug-8-2000]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 
         (840 letters)

Database: est_human
           2,661,504 sequences; 1,121,792,387 total letters

Distribution of 104 Blast Hits on the Query Sequence 


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AA977146.1|AA977146  oq24g06.s1 NCI_CGAP_GC4 Homo sapiens...   775  0.0
gb|AI962411.1|AI962411  wq41d11.x1 NCI_CGAP_GC6 Homo sapiens...   761  0.0
gb|AI650378.1|AI650378  wa90b05.x1 NCI_CGAP_GC6 Homo sapiens...   753  0.0
gb|AI825721.1|AI825721  wb75g12.x1 NCI_CGAP_GC6 Homo sapiens...   743  0.0
gb|AI801294.1|AI801294  to87c09.x1 NCI_CGAP_Gas4 Homo sapien...   737  0.0
gb|AW385356.1|AW385356  RC5-LT0002-101299-011-e03 LT0002 Hom...   688  0.0
gb|R79130.1|R79130  yi86d10.r1 Soares placenta Nb2HP Homo sa...   666  0.0
gb|R35448.1|R35448  yh80c01.r1 Soares placenta Nb2HP Homo sa...   658  0.0
gb|AI160086.1|AI160086  qc08d03.x1 Soares_fetal_heart_NbHH19...   553  e-155
gb|BE301092.1|BE301092  ba85c12.x1 NIH_MGC_14 Homo sapiens c...   551  e-155
gb|AW069460.1|AW069460  cr46c06.x1 Jia bone marrow stroma Ho...   551  e-155
emb|AL048012.1|AL048012  DKFZp586D0523_s1 586 (synonym: hute...   551  e-155
gb|AI147847.1|AI147847  oz69g07.x1 Soares_senescent_fibrobla...   551  e-155
gb|AI079298.1|AI079298  oz36e07.x1 Soares_NhHMPu_S1 Homo sap...   551  e-155
gb|AI754966.1|AI754966  cr33d10.x1 Jia bone marrow stroma Ho...   549  e-154
gb|AI753114.1|AI753114  cr05d01.x1 Jia bone marrow stroma Ho...   549  e-154
gb|AI312672.1|AI312672  qp77h03.x1 Soares_fetal_lung_NbHL19W...   549  e-154
gb|AI147487.1|AI147487  qa89h03.x1 Soares_fetal_heart_NbHH19...   549  e-154
gb|AA916433.1|AA916433  oh81f09.s1 NCI_CGAP_Co8 Homo sapiens...   549  e-154
gb|AA464278.1|AA464278  zx81f02.s1 Soares ovary tumor NbHOT ...   549  e-154
gb|AA058619.1|AA058619  zk60d10.s1 Soares_pregnant_uterus_Nb...   549  e-154
gb|AA902817.1|AA902817  ok68g12.s1 NCI_CGAP_GC4 Homo sapiens...   547  e-153
gb|AW068641.1|AW068641  cn21f07.x1 Normal Human Trabecular B...   543  e-152
gb|AI814429.1|AI814429  wj73a05.x1 NCI_CGAP_Lu19 Homo sapien...   543  e-152
gb|AI125527.1|AI125527  qd94a07.x1 Soares_testis_NHT Homo sa...   543  e-152
gb|AI080534.1|AI080534  oz63e10.x1 Soares_senescent_fibrobla...   541  e-152
gb|AI633631.1|AI633631  th70e01.x1 Soares_NhHMPu_S1 Homo sap...   525  e-147
gb|AI921079.1|AI921079  wo19c07.x1 NCI_CGAP_Pan1 Homo sapien...   517  e-144
gb|AA025792.1|AA025792  ze81f11.s1 Soares_fetal_heart_NbHH19...   504  e-140
gb|AA042927.1|AA042927  zk53f07.r1 Soares_pregnant_uterus_Nb...   500  e-139
gb|BE208320.1|BE208320  bb22b10.x1 NIH_MGC_14 Homo sapiens c...   484  e-134
gb|AW950688.1|AW950688  EST362758 MAGE resequences, MAGA Hom...   482  e-134
gb|AA662684.1|AA662684  nv06g03.s1 NCI_CGAP_Pr22 Homo sapien...   478  e-132
gb|AI123095.1|AI123095  qa85a08.s1 Soares_fetal_heart_NbHH19...   468  e-130
gb|AI129160.1|AI129160  ox87g10.s1 Soares_senescent_fibrobla...   460  e-127
gb|AI963455.1|AI963455  wt63e04.x1 NCI_CGAP_Pan1 Homo sapien...   456  e-126
gb|AI190448.1|AI190448  qd53h05.x1 Soares_fetal_heart_NbHH19...   456  e-126
gb|AA954132.1|AA954132  oq66b03.s1 NCI_CGAP_Kid6 Homo sapien...   450  e-124
gb|AW067816.1|AW067816  cn19e06.x1 Normal Human Trabecular B...   432  e-119
gb|AI751474.1|AI751474  cn10b10.x1 Normal Human Trabecular B...   430  e-118
gb|AW818488.1|AW818488  RC1-ST0278-140300-016-a02 ST0278 Hom...   420  e-115
gb|AW606828.1|AW606828  PM1-HT0422-170100-005-e11 HT0422 Hom...   420  e-115
gb|AW580247.1|AW580247  PM1-HT0422-090100-004-h01 HT0422 Hom...   420  e-115
gb|AW069596.1|AW069596  cr47e03.x1 Jia bone marrow stroma Ho...   420  e-115
gb|AI400590.1|AI400590  tg88d03.x1 Soares_NhHMPu_S1 Homo sap...   420  e-115
gb|AI138205.1|AI138205  qc54b06.x1 Soares_placenta_8to9weeks...   420  e-115
gb|AW008904.1|AW008904  ws74e05.x1 NCI_CGAP_Co3 Homo sapiens...   412  e-113
gb|AI139225.1|AI139225  qc28d08.x1 Soares_pregnant_uterus_Nb...   412  e-113
gb|AA030005.1|AA030005  zk11c06.s1 Soares_pregnant_uterus_Nb...   412  e-113
gb|AI754698.1|AI754698  cr28h08.x1 Jia bone marrow stroma Ho...   398  e-109


>gb|AA977146.1|AA977146 oq24g06.s1 NCI_CGAP_GC4 Homo sapiens cDNA clone IMAGE:1587322 3'
          Length = 530

 Score =  775 bits (391), Expect = 0.0
 Identities = 398/399 (99%), Gaps = 1/399 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgggaacctaagcgtgggtggccaacatcatatacctcttgaagaagaaggagtcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23  gatgggaacctaagcgtgggtggccaacatcatatacctcttgaagaagaaggagtcagc 82

                                                                       
Query: 61  catcgccaacttgtctctgtagaagctccgggtgtagattcccttgcactgtatcatttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  catcgccaacttgtctctgtagaagctccgggtgtagattcccttgcactgtatcatttc 142

                                                                       
Query: 121 atgctttgatttacactcgaactcgggagggaacatcctgctgcatgacctatcagtatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgctttgatttacactcgaactcgggagggaacatcctgctgcatgacctatcagtatg 202

                                                                       
Query: 181 gtgctaatgtgtctgtggaccctcgctctctgtctccaggcagttctctcgaatactttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gtgctaatgtgtctgtggaccctcgctctctgtctccaggcagttctctcgaatactttg 262

                                                                       
Query: 241 aatgttgtgtaaacagttagccactgctggtgtttatgtgaacattcctatcaatccaaa 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatgttgtgt-aacagttagccactgctggtgtttatgtgaacattcctatcaatccaaa 321

                                                                       
Query: 301 ttccctctggagtttcatgttatgcctgttgcaggcaaatgtaaagtctagaaaataatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttccctctggagtttcatgttatgcctgttgcaggcaaatgtaaagtctagaaaataatg 381

                                                  
Query: 361 caaatgtcacggctactctatatacttttgcttggttca 399
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 382 caaatgtcacggctactctatatacttttgcttggttca 420