Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1031945029-025049-8112 Query= ORF22_1-150 (150 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,044,513 sequences; 330,426,180 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Results of PSI-Blast iteration 2 Skip to the first new sequence Taxonomy reports
RID: 1031945029-025049-8112
Query= ORF22_1-150 (150 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,044,513 sequences; 330,426,180 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Score E Sequences producing significant alignments: (bits) Value gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hom... 243 4e-64 gi|10437850|dbj|BAB15117.1| (AK025351) unnamed protein product [... 181 2e-45 gi|19923427|ref|NP_056339.2| (NM_015524) chromosome 6 open readi... 176 6e-44 gi|10257415|gb|AAG15407.1|AF272151_1 (AF272151) adaptor protein ... 176 6e-44 gi|22538428|ref|NP_679211.1| (NM_147686) chromosome 6 open readi... 176 6e-44 gi|22538426|ref|NP_671733.1| (NM_147200) chromosome 6 open readi... 176 6e-44 gi|2842416|emb|CAA15506.1| (AL008730) dJ487J7.1.1 (putative prot... 176 6e-44 gi|10439491|dbj|BAB15507.1| (AK026602) unnamed protein product [... 176 6e-44 gi|21758050|dbj|BAC05236.1| (AK098107) unnamed protein product [... 175 2e-43 gi|21228803|ref|NP_634725.1| (NC_003901) hypothetical protein [M... 119 1e-26 gi|2842417|emb|CAA15507.1| (AL008730) dJ487J7.1.2 (putative prot... 93 1e-18 gi|19527222|ref|NP_598761.1| (NM_134000) expressed sequence AI42... 92 2e-18 gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling an... 44 6e-04 gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] 44 6e-04 gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expressi... 41 0.003 gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to F... 41 0.003 gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 r... 41 0.003 gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane pr... 41 0.003 Sequences with E-value WORSE than threshold gi|6680411|ref|NP_032385.1| (NM_008359) interleukin 17 receptor ... 39 0.012 gi|21361425|ref|NP_055154.2| (NM_014339) interleukin 17 receptor... 39 0.018 gi|2826476|gb|AAB99730.1| (U58917) IL-17 receptor [Homo sapiens] 39 0.018 gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 r... 38 0.046 gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 r... 38 0.046 gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sa... 38 0.046 gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro... 38 0.046 gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - h... 38 0.046 gi|21223984|ref|NP_629763.1| (NC_003888) putative ATP /GTP-bindi... 34 0.45 gi|17229067|ref|NP_485615.1| (NC_003272) unknown protein [Nostoc... 34 0.58 gi|14601232|ref|NP_147765.1| (NC_000854) hypothetical protein [A... 33 1.2 gi|20820005|ref|XP_136469.1| (XM_136469) similar to ankyrin-like... 33 1.4 gi|13508384|ref|NP_110334.1| (NC_000912) conserved hypothetical ... 33 1.4 gi|1127171|pdb|1CPY| Mol_id: 1; Molecule: Serine Carboxypeptida... 31 3.9 gi|576359|pdb|1YSC| Serine Carboxypeptidase (Cpy, Cpd-Y, Or Pro... 31 4.2 gi|6323955|ref|NP_014026.1| (NC_001145) dispensable for haploidi... 31 4.6 gi|6601590|ref|NP_015628.1| (NM_007332) ankyrin-like protein 1 [... 31 4.8 gi|15236520|ref|NP_194082.1| (NM_118482) disease resistance prot... 31 5.3 gi|6319615|ref|NP_009697.1| (NC_001134) Hypothetical ORF; Ybr139... 31 5.8 gi|17543896|ref|NP_502736.1| (NM_070335) Y64G10A.6.p [Caenorhabd... 30 6.6 gi|15229538|ref|NP_189031.1| (NM_113294) topoisomerase II; prote... 30 6.7 gi|1705669|sp|P52710|CBPY_PICPA Carboxypeptidase Y precursor (Ca... 30 8.0 gi|15897958|ref|NP_342563.1| (NC_002754) Conserved hypothetical ... 30 8.7 gi|5091525|dbj|BAA78760.1| (AB023482) EST C97523(C60312) corresp... 30 9.5 gi|21230966|ref|NP_636883.1| (NC_003902) 5-methyltetrahydrofolat... 30 9.9 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hom... 243 4e-64 gi|10437850|dbj|BAB15117.1| (AK025351) unnamed protein product [... 181 2e-45 gi|19923427|ref|NP_056339.2| (NM_015524) chromosome 6 open readi... 176 6e-44 gi|10257415|gb|AAG15407.1|AF272151_1 (AF272151) adaptor protein ... 176 6e-44 gi|22538428|ref|NP_679211.1| (NM_147686) chromosome 6 open readi... 176 6e-44 gi|22538426|ref|NP_671733.1| (NM_147200) chromosome 6 open readi... 176 6e-44 gi|2842416|emb|CAA15506.1| (AL008730) dJ487J7.1.1 (putative prot... 176 6e-44 gi|10439491|dbj|BAB15507.1| (AK026602) unnamed protein product [... 176 6e-44 gi|21758050|dbj|BAC05236.1| (AK098107) unnamed protein product [... 175 2e-43 gi|21228803|ref|NP_634725.1| (NC_003901) hypothetical protein [M... 119 1e-26 gi|2842417|emb|CAA15507.1| (AL008730) dJ487J7.1.2 (putative prot... 93 1e-18 gi|19527222|ref|NP_598761.1| (NM_134000) expressed sequence AI42... 92 2e-18 gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling an... 44 6e-04 gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] 44 6e-04 gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expressi... 41 0.003 gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to F... 41 0.003 gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 r... 41 0.003 gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane pr... 41 0.003
gi|6680411|ref|NP_032385.1| (NM_008359) interleukin 17 receptor ... 39 0.012 gi|21361425|ref|NP_055154.2| (NM_014339) interleukin 17 receptor... 39 0.018 gi|2826476|gb|AAB99730.1| (U58917) IL-17 receptor [Homo sapiens] 39 0.018 gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 r... 38 0.046 gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 r... 38 0.046 gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sa... 38 0.046 gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro... 38 0.046 gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - h... 38 0.046 gi|21223984|ref|NP_629763.1| (NC_003888) putative ATP /GTP-bindi... 34 0.45 gi|17229067|ref|NP_485615.1| (NC_003272) unknown protein [Nostoc... 34 0.58 gi|14601232|ref|NP_147765.1| (NC_000854) hypothetical protein [A... 33 1.2 gi|20820005|ref|XP_136469.1| (XM_136469) similar to ankyrin-like... 33 1.4 gi|13508384|ref|NP_110334.1| (NC_000912) conserved hypothetical ... 33 1.4 gi|1127171|pdb|1CPY| Mol_id: 1; Molecule: Serine Carboxypeptida... 31 3.9 gi|576359|pdb|1YSC| Serine Carboxypeptidase (Cpy, Cpd-Y, Or Pro... 31 4.2 gi|6323955|ref|NP_014026.1| (NC_001145) dispensable for haploidi... 31 4.6 gi|6601590|ref|NP_015628.1| (NM_007332) ankyrin-like protein 1 [... 31 4.8 gi|15236520|ref|NP_194082.1| (NM_118482) disease resistance prot... 31 5.3 gi|6319615|ref|NP_009697.1| (NC_001134) Hypothetical ORF; Ybr139... 31 5.8 gi|17543896|ref|NP_502736.1| (NM_070335) Y64G10A.6.p [Caenorhabd... 30 6.6 gi|15229538|ref|NP_189031.1| (NM_113294) topoisomerase II; prote... 30 6.7 gi|1705669|sp|P52710|CBPY_PICPA Carboxypeptidase Y precursor (Ca... 30 8.0 gi|15897958|ref|NP_342563.1| (NC_002754) Conserved hypothetical ... 30 8.7 gi|5091525|dbj|BAA78760.1| (AB023482) EST C97523(C60312) corresp... 30 9.5 gi|21230966|ref|NP_636883.1| (NC_003902) 5-methyltetrahydrofolat... 30 9.9
>gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hominis] Length = 306 Score = 243 bits (621), Expect = 4e-64 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV 60 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV Sbjct: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV 60 Query: 61 LIICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKL 120 LIICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKL Sbjct: 61 LIICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKL 120 Query: 121 WTELYHDEQSMEYNNQLDDLLATIIGHD 148 WTELYHDEQSMEYNNQLDDLLATIIGHD Sbjct: 121 WTELYHDEQSMEYNNQLDDLLATIIGHD 148
>gi|10437850|dbj|BAB15117.1| (AK025351) unnamed protein product [Homo sapiens] Length = 564 Score = 181 bits (459), Expect = 2e-45 Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 14/129 (10%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 400 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDTVM 456 Query: 60 VLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKDK 109 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ K Sbjct: 457 IIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKK 516 Query: 110 KNIPNFLKS 118 +++P +L++ Sbjct: 517 EHVPTWLQN 525
>gi|19923427|ref|NP_056339.2| (NM_015524) chromosome 6 open reading frame 5; chromosome 6 open reading frame 6 [Homo sapiens] gi|7688612|gb|AAF67447.1|AF136407_1 (AF136407) unknown [Homo sapiens] Length = 565 Score = 176 bits (447), Expect = 6e-44 Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 400 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 456 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 457 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 516 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 517 KEHVPTWLQN 526
>gi|10257415|gb|AAG15407.1|AF272151_1 (AF272151) adaptor protein CIKS [Homo sapiens] Length = 574 Score = 176 bits (447), Expect = 6e-44 Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 409 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 465 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 466 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 525 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 526 KEHVPTWLQN 535
>gi|22538428|ref|NP_679211.1| (NM_147686) chromosome 6 open reading frame 4 isoform 2; chromosome 6 open reading frame 6; chromosome 6 open reading frame 5; connection to IKK and SAPK/JNK; NFkB-activating protein ACT1 [Homo sapiens] gi|7512888|pir||T08794 hypothetical protein DKFZp586G0522.1 - human gi|4886511|emb|CAB43390.1| (AL050289) hypothetical protein [Homo sapiens] gi|7688610|gb|AAF67446.1|AF136406_1 (AF136406) unknown [Homo sapiens] gi|12803951|gb|AAH02823.1|AAH02823 (BC002823) DKFZP586G0522 protein [Homo sapiens] Length = 565 Score = 176 bits (447), Expect = 6e-44 Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 400 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 456 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 457 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 516 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 517 KEHVPTWLQN 526
>gi|22538426|ref|NP_671733.1| (NM_147200) chromosome 6 open reading frame 4 isoform 1; chromosome 6 open reading frame 6; chromosome 6 open reading frame 5; connection to IKK and SAPK/JNK; NFkB-activating protein ACT1 [Homo sapiens] gi|13626146|sp|O43734|CIKS_HUMAN Adapter protein CIKS (Connection to IKK and SAPK/JNK) (Nuclear factor NF-kappa-B activator 1) (ACT1) Length = 574 Score = 176 bits (447), Expect = 6e-44 Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 409 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 465 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 466 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 525 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 526 KEHVPTWLQN 535
>gi|2842416|emb|CAA15506.1| (AL008730) dJ487J7.1.1 (putative protein dJ487J7.1 isoform 1) [Homo sapiens] gi|7688608|gb|AAF67445.1|AF136405_1 (AF136405) unknown [Homo sapiens] gi|10242290|gb|AAG15367.1|AF274303_1 (AF274303) NFkB-activating protein ACT1 [Homo sapiens] Length = 574 Score = 176 bits (447), Expect = 6e-44 Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 409 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 465 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 466 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 525 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 526 KEHVPTWLQN 535
>gi|10439491|dbj|BAB15507.1| (AK026602) unnamed protein product [Homo sapiens] Length = 389 Score = 176 bits (447), Expect = 6e-44 Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 224 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 280 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 281 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 340 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 341 KEHVPTWLQN 350
>gi|21758050|dbj|BAC05236.1| (AK098107) unnamed protein product [Homo sapiens] Length = 555 Score = 175 bits (443), Expect = 2e-43 Identities = 30/130 (23%), Positives = 66/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQ-SD 58 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 390 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 446 Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E + + RFIP++ Sbjct: 447 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFISQGSMNFRFIPVLFPNAK 506 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 507 KEHVPTWLQN 516
>gi|21228803|ref|NP_634725.1| (NC_003901) hypothetical protein [Methanosarcina mazei Goe1] gi|20907322|gb|AAM32397.1| (AE013517) hypothetical protein [Methanosarcina mazei Goe1] Length = 299 Score = 119 bits (298), Expect = 1e-26 Identities = 24/94 (25%), Positives = 56/94 (59%), Gaps = 6/94 (6%) Query: 30 EFEVSFDKWDINKGQEVPLFMERGIQQSDFVLIICSERY-----KVNADKRRGGSGYEAR 84 + + D+++ + PL+M++ I+++DFVL++C++ Y + + G+ +E+ Sbjct: 5 GIDCNIDQYEASPSIGWPLWMKKQIKEADFVLVVCTDVYEKRFEREEETETGLGAKWESS 64 Query: 85 LMSDEVLRNEDK-DRFIPIILNEKDKKNIPNFLK 117 +++ E+ E K ++FIPI+ + +D + IP L+ Sbjct: 65 ILAQELYDAEAKNNKFIPIVFSFEDLEYIPVVLR 98
>gi|2842417|emb|CAA15507.1| (AL008730) dJ487J7.1.2 (putative protein dJ487J7.1 isoform 2) [Homo sapiens] Length = 109 Score = 92.6 bits (229), Expect = 1e-18 Identities = 15/70 (21%), Positives = 35/70 (49%), Gaps = 10/70 (14%) Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 1 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 60 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 61 KEHVPTWLQN 70
>gi|19527222|ref|NP_598761.1| (NM_134000) expressed sequence AI429613 [Mus musculus] gi|20858395|ref|XP_121998.1| (XM_121998) expressed sequence AI429613 [Mus musculus] gi|18490464|gb|AAH22633.1| (BC022633) Unknown (protein for MGC:31212) [Mus musculus] Length = 109 Score = 91.9 bits (227), Expect = 2e-18 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 10/70 (14%) Query: 59 FVLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 +++ S +YK ++ D+ + Y R+M E + + RFIP++ Sbjct: 1 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFISQGSMNFRFIPVLFPNAK 60 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 61 KEHVPTWLQN 70
>gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling antagonist Sef [Danio rerio] Length = 745 Score = 43.7 bits (102), Expect = 6e-04 Identities = 24/81 (29%), Positives = 40/81 (48%), Gaps = 5/81 (6%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 KIFI Y + D + VI+ A L+D+ EVS D W+ + ++ R I ++ Sbjct: 356 KIFICYSSRDGAKHLAVIQSFAFFLQDFCGCEVSLDLWEHLEICKEGQMSWLSRRIDEAH 415 Query: 59 FVLIICSERYK-VNADKRRGG 78 F++ +CS+ K + R G Sbjct: 416 FIITVCSKGLKHFVEKRHRKG 436
>gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] Length = 745 Score = 43.7 bits (102), Expect = 6e-04 Identities = 24/81 (29%), Positives = 40/81 (48%), Gaps = 5/81 (6%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 KIFI Y + D + VI+ A L+D+ EVS D W+ + ++ R I ++ Sbjct: 356 KIFICYSSRDGAKHLAVIQSFAFFLQDFCGCEVSLDLWEHLEICKEGQMSWLSRRIDEAH 415 Query: 59 FVLIICSERYK-VNADKRRGG 78 F++ +CS+ K + R G Sbjct: 416 FIITVCSKGLKHFVEKRHRKG 436
>gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expression to FGF protein [Mus musculus] Length = 582 Score = 41.4 bits (96), Expect = 0.003 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 10/91 (10%) Query: 3 KIFISYA-WDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y+ D V++ A L+D+ EV+ D W+ + + + I +S Sbjct: 201 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQKIHESQ 260 Query: 59 FVLIICSE--RY---KVNADKRRGGSGYEAR 84 F++++CS+ +Y K N + +GGS EA+ Sbjct: 261 FIIVVCSKGMKYFVDKKNF-RHKGGSRGEAQ 290
>gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to Fgf genes [Mus musculus] Length = 710 Score = 41.4 bits (96), Expect = 0.003 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 10/91 (10%) Query: 3 KIFISYA-WDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y+ D V++ A L+D+ EV+ D W+ + + + I +S Sbjct: 329 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQKIHESQ 388 Query: 59 FVLIICSE--RY---KVNADKRRGGSGYEAR 84 F++++CS+ +Y K N + +GGS EA+ Sbjct: 389 FIIVVCSKGMKYFVDKKNF-RHKGGSRGEAQ 418
>gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 receptor-like protein short form [Mus musculus] Length = 594 Score = 41.4 bits (96), Expect = 0.003 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 10/91 (10%) Query: 3 KIFISYA-WDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y+ D V++ A L+D+ EV+ D W+ + + + I +S Sbjct: 213 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQKIHESQ 272 Query: 59 FVLIICSE--RY---KVNADKRRGGSGYEAR 84 F++++CS+ +Y K N + +GGS EA+ Sbjct: 273 FIIVVCSKGMKYFVDKKNF-RHKGGSRGEAQ 302
>gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane protein [Mus musculus] gi|21667508|gb|AAM74079.1|AF494210_1 (AF494210) interleukin 17 receptor-like protein long form [Mus musculus] Length = 738 Score = 41.4 bits (96), Expect = 0.003 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 10/91 (10%) Query: 3 KIFISYA-WDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y+ D V++ A L+D+ EV+ D W+ + + + I +S Sbjct: 357 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQKIHESQ 416 Query: 59 FVLIICSE--RY---KVNADKRRGGSGYEAR 84 F++++CS+ +Y K N + +GGS EA+ Sbjct: 417 FIIVVCSKGMKYFVDKKNF-RHKGGSRGEAQ 446
>gi|6680411|ref|NP_032385.1| (NM_008359) interleukin 17 receptor [Mus musculus] gi|20454961|sp|Q60943|I17R_MOUSE Interleukin-17 receptor precursor (IL-17 receptor) gi|1161343|gb|AAC52357.1| (U31993) interleukin 17 receptor [Mus musculus] Length = 864 Score = 39.5 bits (91), Expect = 0.012 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 16/89 (17%) Query: 2 KKIFISYAWDEIED-EKVIKLAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 +K++I Y+ D E V+K A+ L EV+ D + + V ++ R Q+ Sbjct: 380 RKVWIVYSADHPLYVEVVLKFAQFLITACGTEVALDLLEEQVISEVGVMTWVSRQKQEMV 439 Query: 59 ----FVLIICSERYKVNADKRRGGSGYEA 83 ++I+CS R + ++A Sbjct: 440 ESNSKIIILCS---------RGTQAKWKA 459
>gi|21361425|ref|NP_055154.2| (NM_014339) interleukin 17 receptor [Homo sapiens] gi|20454982|sp|Q96F46|I17R_HUMAN Interleukin-17 receptor precursor (IL-17 receptor) gi|15079611|gb|AAH11624.1|AAH11624 (BC011624) Similar to interleukin 17 receptor [Homo sapiens] Length = 866 Score = 38.7 bits (89), Expect = 0.018 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 16/89 (17%) Query: 2 KKIFISYAWDEIEDEKVI-KLAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 +K++I Y+ D V+ K A+ L EV+ D + V ++ R Q+ Sbjct: 378 RKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMV 437 Query: 59 ----FVLIICSERYKVNADKRRGGSGYEA 83 ++++CS R + ++A Sbjct: 438 ESNSKIIVLCS---------RGTRAKWQA 457
>gi|2826476|gb|AAB99730.1| (U58917) IL-17 receptor [Homo sapiens] Length = 866 Score = 38.7 bits (89), Expect = 0.018 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 16/89 (17%) Query: 2 KKIFISYAWDEIEDEKVI-KLAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 +K++I Y+ D V+ K A+ L EV+ D + V ++ R Q+ Sbjct: 378 RKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMV 437 Query: 59 ----FVLIICSERYKVNADKRRGGSGYEA 83 ++++CS R + ++A Sbjct: 438 ESNSKIIVLCS---------RGTRAKWQA 457
>gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 receptor-like protein short form [Homo sapiens] gi|21739454|emb|CAD38769.1| (AL833913) hypothetical protein [Homo sapiens] Length = 595 Score = 37.5 bits (86), Expect = 0.046 Identities = 20/77 (25%), Positives = 40/77 (50%), Gaps = 4/77 (5%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y + D V++ A L+D+ EV+ D W+ + ++ + I +S Sbjct: 213 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQKIHESQ 272 Query: 59 FVLIICSERYKVNADKR 75 F++++CS+ K DK+ Sbjct: 273 FIIVVCSKGMKYFVDKK 289
>gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 receptor-like protein long form [Homo sapiens] Length = 739 Score = 37.5 bits (86), Expect = 0.046 Identities = 20/77 (25%), Positives = 40/77 (50%), Gaps = 4/77 (5%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y + D V++ A L+D+ EV+ D W+ + ++ + I +S Sbjct: 357 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQKIHESQ 416 Query: 59 FVLIICSERYKVNADKR 75 F++++CS+ K DK+ Sbjct: 417 FIIVVCSKGMKYFVDKK 433
>gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sapiens] Length = 739 Score = 37.5 bits (86), Expect = 0.046 Identities = 20/77 (25%), Positives = 40/77 (50%), Gaps = 4/77 (5%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y + D V++ A L+D+ EV+ D W+ + ++ + I +S Sbjct: 357 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQKIHESQ 416 Query: 59 FVLIICSERYKVNADKR 75 F++++CS+ K DK+ Sbjct: 417 FIIVVCSKGMKYFVDKK 433
>gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro cis trans isomerase [Homo sapiens] Length = 526 Score = 37.5 bits (86), Expect = 0.046 Identities = 20/77 (25%), Positives = 40/77 (50%), Gaps = 4/77 (5%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y + D V++ A L+D+ EV+ D W+ + ++ + I +S Sbjct: 144 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQKIHESQ 203 Query: 59 FVLIICSERYKVNADKR 75 F++++CS+ K DK+ Sbjct: 204 FIIVVCSKGMKYFVDKK 220
>gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - human (fragment) gi|6453552|emb|CAB61408.1| (AL133097) hypothetical protein [Homo sapiens] Length = 564 Score = 37.5 bits (86), Expect = 0.046 Identities = 20/77 (25%), Positives = 40/77 (50%), Gaps = 4/77 (5%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD--INKGQEVPLFMERGIQQSD 58 K+F+ Y + D V++ A L+D+ EV+ D W+ + ++ + I +S Sbjct: 182 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQKIHESQ 241 Query: 59 FVLIICSERYKVNADKR 75 F++++CS+ K DK+ Sbjct: 242 FIIVVCSKGMKYFVDKK 258
>gi|21223984|ref|NP_629763.1| (NC_003888) putative ATP /GTP-binding protein [Streptomyces coelicolor A3(2)] gi|7480482|pir||T35469 probable ATP /GTP-binding protein - Streptomyces coelicolor gi|3319757|emb|CAA19923.1| (AL031035) putative ATP /GTP-binding protein [Streptomyces coelicolor A3(2)] Length = 886 Score = 34.1 bits (77), Expect = 0.45 Identities = 30/129 (23%), Positives = 53/129 (40%), Gaps = 13/129 (10%) Query: 2 KKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFVL 61 ++ FISYA D + + V D WD G + M+ ++++D V+ Sbjct: 6 QQFFISYA---GTDRAWAEWVGWHLEQAGHRVILDVWDWRTGDNLVQRMDEALERADAVI 62 Query: 62 IICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKLW 121 + S Y D+R + A + +DR IP+ L ++P L +KL Sbjct: 63 ALFSTSY--FEDERWTTEEWTAAVAH--------RDRLIPLALEPLTTSDLPRVLAAKLR 112 Query: 122 TELYHDEQS 130 L+ ++S Sbjct: 113 KNLHGLDES 121
>gi|17229067|ref|NP_485615.1| (NC_003272) unknown protein [Nostoc sp. PCC 7120] gi|17135395|dbj|BAB77941.1| (AP003586) ORF_ID:alr1575~unknown protein [Nostoc sp. PCC 7120] Length = 1047 Score = 33.7 bits (76), Expect = 0.58 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 16/142 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV 60 M ++F+SY+ E E + K+A++L + F V +K DI G + + RGI+++D V Sbjct: 235 MTQVFLSYS--ENERLFMEKIAKILMR-ESFTVWTNKTDIQSGADFTESINRGIEEADNV 291 Query: 61 LIICSERYKVNADKRRGGSGYEARLMSDEV-LRNEDKDRFIPIILNEKDKKNIPNFLKSK 119 +++ S + ++ E+ K R IP+++ D + IP L Sbjct: 292 VLLLST------------ASLQSEYCQMELSYAFSLKKRIIPLLIEPVDIEQIPVELSIL 339 Query: 120 LWTELYHDEQSMEYNNQLDDLL 141 + + E+ + + D L+ Sbjct: 340 QFIDFTDQEEQGKESADTDRLI 361
>gi|14601232|ref|NP_147765.1| (NC_000854) hypothetical protein [Aeropyrum pernix] gi|7516316|pir||B72589 hypothetical protein APE1182 - Aeropyrum pernix (strain K1) gi|5104854|dbj|BAA80168.1| (AP000061) 522aa long hypothetical protein [Aeropyrum pernix] Length = 522 Score = 32.9 bits (74), Expect = 1.2 Identities = 12/36 (33%), Positives = 22/36 (60%), Gaps = 6/36 (16%) Query: 115 FLKSKLW------TELYHDEQSMEYNNQLDDLLATI 144 +++ +LW LYH+EQS Y+ ++DDL + + Sbjct: 205 WIQHRLWHLMDPKHPLYHEEQSKRYSKKIDDLWSLV 240
>gi|20820005|ref|XP_136469.1| (XM_136469) similar to ankyrin-like protein 1 [Mus musculus] Length = 860 Score = 32.5 bits (73), Expect = 1.4 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 64 CSERYK------VNADKRRGGSGYEARLMS--DEVLRNEDKDRFIPIILNEKDKKNIPNF 115 C++R ++ R G + A L+S ++L N+ + F+ I L+ K K+ + Sbjct: 267 CTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTT 326 Query: 116 LKSKLWTE 123 +++K W E Sbjct: 327 IRNKRWDE 334
>gi|13508384|ref|NP_110334.1| (NC_000912) conserved hypothetical protein [Mycoplasma pneumoniae] gi|2496436|sp|P75152|Y43B_MYCPN Hypothetical lipoprotein MG439 homolog 2 precursor (E09_orf283a) gi|2146556|pir||S73523 probable lipoprotein E09_orf283a - Mycoplasma pneumoniae (strain ATCC 29342) gi|1673861|gb|AAB95845.1| (AE000020) conserved hypothetical protein, see: MPN643 [Mycoplasma pneumoniae] Length = 283 Score = 32.5 bits (73), Expect = 1.4 Identities = 22/84 (26%), Positives = 42/84 (49%), Gaps = 5/84 (5%) Query: 60 VLIICSERYKVNADK--RRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLK 117 V+ I E Y+ +A+K +G++ LM ++L E RFI + +DK ++ + Sbjct: 52 VIKILKEGYESDANKAVHALLAGWKYTLMDQQLLSKEVDSRFIKAFGSGRDKGDVTPSVS 111 Query: 118 SKLWTELYHDEQSMEYNNQLDDLL 141 K LY +E +++Q+ +L Sbjct: 112 EK---GLYLNETYTGFSSQIAKVL 132
>gi|1127171|pdb|1CPY| Mol_id: 1; Molecule: Serine Carboxypeptidase; Chain: Null; Ec: 3.4.16.5; Mutation: E65a, E145a Length = 421 Score = 31.0 bits (69), Expect = 3.9 Identities = 12/40 (30%), Positives = 24/40 (60%) Query: 97 DRFIPIILNEKDKKNIPNFLKSKLWTELYHDEQSMEYNNQ 136 ++ +PI++ DK I N+L +K WT++ + E+ +Q Sbjct: 325 NQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQ 364
>gi|576359|pdb|1YSC| Serine Carboxypeptidase (Cpy, Cpd-Y, Or Proteinase C) (E.C.3.4.16.5) Length = 421 Score = 31.0 bits (69), Expect = 4.2 Identities = 12/40 (30%), Positives = 24/40 (60%) Query: 97 DRFIPIILNEKDKKNIPNFLKSKLWTELYHDEQSMEYNNQ 136 ++ +PI++ DK I N+L +K WT++ + E+ +Q Sbjct: 325 NQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQ 364
>gi|6323955|ref|NP_014026.1| (NC_001145) dispensable for haploidization and sporulation, but required for full protein degradation during sporulation; Prc1p [Saccharomyces cerevisiae] gi|115901|sp|P00729|CBPY_YEAST Carboxypeptidase Y precursor (Carboxypeptidase YSCY) gi|279561|pir||CPBYY carboxypeptidase C (EC 3.4.16.5) precursor [validated] - yeast (Saccharomyces cerevisiae) gi|172239|gb|AAA34902.1| (M15482) protein carboxypeptidase Y precursor [Saccharomyces cerevisiae] gi|530354|emb|CAA56806.1| (X80836) carboxypeptidase Y precursor [Saccharomyces cerevisiae] Length = 532 Score = 31.0 bits (69), Expect = 4.6 Identities = 12/40 (30%), Positives = 24/40 (60%) Query: 97 DRFIPIILNEKDKKNIPNFLKSKLWTELYHDEQSMEYNNQ 136 ++ +PI++ DK I N+L +K WT++ + E+ +Q Sbjct: 436 NQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQ 475
>gi|6601590|ref|NP_015628.1| (NM_007332) ankyrin-like protein 1 [Homo sapiens] gi|3287188|emb|CAA71610.1| (Y10601) ankyrin-like protein [Homo sapiens] Length = 1119 Score = 30.6 bits (68), Expect = 4.8 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Query: 64 CSERYKVN------ADKRRGGSGYEARLMSD--EVLRNEDKDRFIPIILNEKDKKNIPNF 115 C++R + R G + A L+S +++ N+ + F+ + L+ K K+ + Sbjct: 540 CTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASFLHLALHNKRKEVVLTI 599 Query: 116 LKSKLWTE 123 ++SK W E Sbjct: 600 IRSKRWDE 607
>gi|15236520|ref|NP_194082.1| (NM_118482) disease resistance protein (TIR class), putative; protein id: At4g23510.1 [Arabidopsis thaliana] gi|7485557|pir||T05389 hypothetical protein F16G20.210 - Arabidopsis thaliana gi|3451076|emb|CAA20472.1| (AL031326) putative protein [Arabidopsis thaliana] gi|7269199|emb|CAB79306.1| (AL161559) putative protein [Arabidopsis thaliana] Length = 867 Score = 30.6 bits (68), Expect = 5.3 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 3 KIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFVLI 62 ++FIS+ V + LE+ E V D+++ +G+ + ER I++S L+ Sbjct: 243 QVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDEYE-IRGRPITTLFER-IRESSIALV 300 Query: 63 ICSERY 68 I S++Y Sbjct: 301 IFSDKY 306
>gi|6319615|ref|NP_009697.1| (NC_001134) Hypothetical ORF; Ybr139wp [Saccharomyces cerevisiae] gi|586548|sp|P38109|YBY9_YEAST Putative serine carboxypeptidase in ESR1-IRA1 intergenic region gi|626843|pir||S46008 probable carboxypeptidase C (EC 3.4.16.5) YBR139w - yeast (Saccharomyces cerevisiae) gi|496869|emb|CAA53497.1| (X75891) YBR1015 [Saccharomyces cerevisiae] gi|536436|emb|CAA85097.1| (Z36008) ORF YBR139w [Saccharomyces cerevisiae] gi|1582525|prf||2118402N YBR1015 gene [Saccharomyces cerevisiae] Length = 508 Score = 30.6 bits (68), Expect = 5.8 Identities = 9/32 (28%), Positives = 16/32 (49%) Query: 91 LRNEDKDRFIPIILNEKDKKNIPNFLKSKLWT 122 E + IP+++ DK I N+L + W+ Sbjct: 396 YIAELLNHNIPVLIYAGDKDYICNWLGNHAWS 427
>gi|17543896|ref|NP_502736.1| (NM_070335) Y64G10A.6.p [Caenorhabditis elegans] gi|7510358|pir||T27282 hypothetical protein Y64G10A.e - Caenorhabditis elegans gi|5824840|emb|CAB54470.1| (AL110498) predicted using Genefinder~cDNA EST yk270d3.3 comes from this gene~cDNA EST yk270d3.5 comes from this gene [Caenorhabditis elegans] Length = 846 Score = 30.2 bits (67), Expect = 6.6 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 4 IFISYAWDEIE-DEKVIKLAEMLEDYKEFEVSFDKWD 39 + I Y+ D + + V+ AE+L D V D WD Sbjct: 479 VLIVYSHDSAQHEAAVLAFAELLRDVFNLNVHLDVWD 515
>gi|15229538|ref|NP_189031.1| (NM_113294) topoisomerase II; protein id: At3g23890.1, supported by cDNA: gi_474889 [Arabidopsis thaliana] gi|1174740|sp|P30182|TOP2_ARATH DNA topoisomerase II gi|2129576|pir||S53599 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) II - Arabidopsis thaliana gi|474890|gb|AAA65448.1| (L21015) topoisomerase II [Arabidopsis thaliana] gi|9294657|dbj|BAB03006.1| (AP001297) DNA topoisomerase II [Arabidopsis thaliana] Length = 1473 Score = 30.2 bits (67), Expect = 6.7 Identities = 20/76 (26%), Positives = 35/76 (45%), Gaps = 6/76 (7%) Query: 63 ICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFI------PIILNEKDKKNIPNFL 116 I E + + + + M E+L+ E+K RFI II+N++ K +I L Sbjct: 1008 ILEEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVEDL 1067 Query: 117 KSKLWTELYHDEQSME 132 + K +T +S+E Sbjct: 1068 RQKGFTPFPRKAESVE 1083
>gi|1705669|sp|P52710|CBPY_PICPA Carboxypeptidase Y precursor (Carboxypeptidase YSCY) gi|2131156|pir||S61713 carboxypeptidase C (EC 3.4.16.5) precursor - yeast (Pichia pastoris) gi|1171616|emb|CAA61240.1| (X87987) carboxypeptidase Y [Pichia pastoris] Length = 523 Score = 29.8 bits (66), Expect = 8.0 Identities = 8/28 (28%), Positives = 19/28 (67%) Query: 97 DRFIPIILNEKDKKNIPNFLKSKLWTEL 124 ++ +P+++ DK I N+L ++ WT++ Sbjct: 428 NKGLPVLIYAGDKDFICNWLGNRAWTDV 455
>gi|15897958|ref|NP_342563.1| (NC_002754) Conserved hypothetical protein [Sulfolobus solfataricus] gi|13814283|gb|AAK41353.1| (AE006727) Conserved hypothetical protein [Sulfolobus solfataricus] Length = 424 Score = 29.8 bits (66), Expect = 8.7 Identities = 19/72 (26%), Positives = 29/72 (39%), Gaps = 6/72 (8%) Query: 69 KVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKLWTELYHDE 128 ++ D R YE R E + F I L+ DK + K+ + T YH Sbjct: 186 ELKEDLERLILRYENR----EFRDQG--EDFYLITLSLPDKLYLDEVRKNVVDTVKYHHM 239 Query: 129 QSMEYNNQLDDL 140 + YN ++D L Sbjct: 240 LKLSYNREVDSL 251
>gi|5091525|dbj|BAA78760.1| (AB023482) EST C97523(C60312) corresponds to a region of the predicted gene.~Hypothetical protein [Oryza sativa (japonica cultivar-group)] Length = 217 Score = 29.8 bits (66), Expect = 9.5 Identities = 15/72 (20%), Positives = 31/72 (42%), Gaps = 5/72 (6%) Query: 69 KVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKN-----IPNFLKSKLWTE 123 K +++ G + +R V++ RF ++ + + IP S LW Sbjct: 107 KFKFKRKKYGGKFVSRSDKQHVIKKGSMIRFSVKRVDAEMNCHVTGSLIPPHTGSMLWLS 166 Query: 124 LYHDEQSMEYNN 135 ++ DE ++E N+ Sbjct: 167 VHDDEYALEINS 178
>gi|21230966|ref|NP_636883.1| (NC_003902) 5-methyltetrahydrofolate-homocysteine methyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21112585|gb|AAM40807.1| (AE012252) 5-methyltetrahydrofolate-homocysteine methyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 918 Score = 29.8 bits (66), Expect = 9.9 Identities = 12/38 (31%), Positives = 21/38 (54%), Gaps = 1/38 (2%) Query: 86 MSDEVLRNE-DKDRFIPIILNEKDKKNIPNFLKSKLWT 122 M + ++ +E RF+ +I++E D IP + S WT Sbjct: 70 MDEGLIDSEKAMTRFLNLIMSEPDIARIPVMVDSSKWT 107
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 4, 2002 12:20 AM Number of letters in database: 330,426,180 Number of sequences in database: 1,044,513 Lambda K H 0.318 0.159 0.467 Gapped Lambda K H 0.267 0.0485 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 118,529,037 Number of Sequences: 1044513 Number of extensions: 5689813 Number of successful extensions: 12751 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 45 Number of HSP's that attempted gapping in prelim test: 12672 Number of HSP's gapped (non-prelim): 67 length of query: 150 length of database: 330,426,180 effective HSP length: 110 effective length of query: 40 effective length of database: 215,529,750 effective search space: 8621190000 effective search space used: 8621190000 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 66 (29.8 bits)