Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1031944935-021408-31598 Query= ORF22_1-150 (150 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,044,513 sequences; 330,426,180 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Results of PSI-Blast iteration 1 Taxonomy reports
RID: 1031944935-021408-31598
Query= ORF22_1-150 (150 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,044,513 sequences; 330,426,180 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Score E Sequences producing significant alignments: (bits) Value gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hom... 277 3e-74 gi|10437850|dbj|BAB15117.1| (AK025351) unnamed protein product [... 42 0.002 gi|21228803|ref|NP_634725.1| (NC_003901) hypothetical protein [M... 42 0.002 Sequences with E-value WORSE than threshold gi|19923427|ref|NP_056339.2| (NM_015524) chromosome 6 open readi... 39 0.013 gi|10257415|gb|AAG15407.1|AF272151_1 (AF272151) adaptor protein ... 39 0.013 gi|22538428|ref|NP_679211.1| (NM_147686) chromosome 6 open readi... 39 0.013 gi|22538426|ref|NP_671733.1| (NM_147200) chromosome 6 open readi... 39 0.013 gi|2842416|emb|CAA15506.1| (AL008730) dJ487J7.1.1 (putative prot... 39 0.013 gi|10439491|dbj|BAB15507.1| (AK026602) unnamed protein product [... 39 0.013 gi|21758050|dbj|BAC05236.1| (AK098107) unnamed protein product [... 38 0.031 gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to F... 35 0.32 gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane pr... 35 0.32 gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expressi... 35 0.36 gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 r... 34 0.43 gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling an... 33 0.77 gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] 33 0.77 gi|21223984|ref|NP_629763.1| (NC_003888) putative ATP /GTP-bindi... 33 1.3 gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 r... 32 1.5 gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sa... 32 1.5 gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro... 32 1.6 gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - h... 32 1.7 gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 r... 32 2.0 gi|15235118|ref|NP_192784.1| (NM_117114) putative retrotransposo... 31 3.3 gi|15893644|ref|NP_346993.1| (NC_003030) 2,3-cyclic-nucleotide 2... 31 3.4 gi|14590719|ref|NP_142789.1| (NC_000961) transport protein [Pyro... 31 3.5 gi|15387737|emb|CAC59865.1| (AL160371) possible monooxygenase [L... 31 3.6 gi|18977042|ref|NP_578399.1| (NC_003413) RNase l inhibitor [Pyro... 31 3.7 gi|15224102|ref|NP_179998.1| (NM_127982) myrcene/ocimene synthas... 31 4.0 gi|9957293|gb|AAG09310.1|AF178535_1 (AF178535) myrcene/ocimene s... 31 5.0 gi|1688311|gb|AAB36954.1| (U78608) Rep protein [Paenibacillus po... 30 7.2 gi|14521449|ref|NP_126925.1| (NC_000868) RNASE L INHIBITOR [Pyro... 30 7.6 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hom... 277 3e-74 gi|10437850|dbj|BAB15117.1| (AK025351) unnamed protein product [... 42 0.002 gi|21228803|ref|NP_634725.1| (NC_003901) hypothetical protein [M... 42 0.002
gi|19923427|ref|NP_056339.2| (NM_015524) chromosome 6 open readi... 39 0.013 gi|10257415|gb|AAG15407.1|AF272151_1 (AF272151) adaptor protein ... 39 0.013 gi|22538428|ref|NP_679211.1| (NM_147686) chromosome 6 open readi... 39 0.013 gi|22538426|ref|NP_671733.1| (NM_147200) chromosome 6 open readi... 39 0.013 gi|2842416|emb|CAA15506.1| (AL008730) dJ487J7.1.1 (putative prot... 39 0.013 gi|10439491|dbj|BAB15507.1| (AK026602) unnamed protein product [... 39 0.013 gi|21758050|dbj|BAC05236.1| (AK098107) unnamed protein product [... 38 0.031 gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to F... 35 0.32 gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane pr... 35 0.32 gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expressi... 35 0.36 gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 r... 34 0.43 gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling an... 33 0.77 gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] 33 0.77 gi|21223984|ref|NP_629763.1| (NC_003888) putative ATP /GTP-bindi... 33 1.3 gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 r... 32 1.5 gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sa... 32 1.5 gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro... 32 1.6 gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - h... 32 1.7 gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 r... 32 2.0 gi|15235118|ref|NP_192784.1| (NM_117114) putative retrotransposo... 31 3.3 gi|15893644|ref|NP_346993.1| (NC_003030) 2,3-cyclic-nucleotide 2... 31 3.4 gi|14590719|ref|NP_142789.1| (NC_000961) transport protein [Pyro... 31 3.5 gi|15387737|emb|CAC59865.1| (AL160371) possible monooxygenase [L... 31 3.6 gi|18977042|ref|NP_578399.1| (NC_003413) RNase l inhibitor [Pyro... 31 3.7 gi|15224102|ref|NP_179998.1| (NM_127982) myrcene/ocimene synthas... 31 4.0 gi|9957293|gb|AAG09310.1|AF178535_1 (AF178535) myrcene/ocimene s... 31 5.0 gi|1688311|gb|AAB36954.1| (U78608) Rep protein [Paenibacillus po... 30 7.2 gi|14521449|ref|NP_126925.1| (NC_000868) RNASE L INHIBITOR [Pyro... 30 7.6
>gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hominis] Length = 306 Score = 277 bits (708), Expect = 3e-74 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV 60 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV Sbjct: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFV 60 Query: 61 LIICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKL 120 LIICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKL Sbjct: 61 LIICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKL 120 Query: 121 WTELYHDEQSMEYNNQLDDLLATIIGHD 148 WTELYHDEQSMEYNNQLDDLLATIIGHD Sbjct: 121 WTELYHDEQSMEYNNQLDDLLATIIGHD 148
>gi|10437850|dbj|BAB15117.1| (AK025351) unnamed protein product [Homo sapiens] Length = 564 Score = 42.4 bits (98), Expect = 0.002 Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 14/129 (10%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ + Sbjct: 400 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDTVM 456 Query: 60 VLIICSERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKDK 109 +++ S +YK ++ D+ + Y R+M E ++ + RFIP++ K Sbjct: 457 IIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKK 516 Query: 110 KNIPNFLKS 118 +++P +L++ Sbjct: 517 EHVPTWLQN 525
>gi|21228803|ref|NP_634725.1| (NC_003901) hypothetical protein [Methanosarcina mazei Goe1] gi|20907322|gb|AAM32397.1| (AE013517) hypothetical protein [Methanosarcina mazei Goe1] Length = 299 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/92 (26%), Positives = 57/92 (61%), Gaps = 6/92 (6%) Query: 32 EVSFDKWDINKGQEVPLFMERGIQQSDFVLIICSERYKVNADKRRG-----GSGYEARLM 86 + + D+++ + PL+M++ I+++DFVL++C++ Y+ ++ G+ +E+ ++ Sbjct: 7 DCNIDQYEASPSIGWPLWMKKQIKEADFVLVVCTDVYEKRFEREEETETGLGAKWESSIL 66 Query: 87 SDEVLRNEDK-DRFIPIILNEKDKKNIPNFLK 117 + E+ E K ++FIPI+ + +D + IP L+ Sbjct: 67 AQELYDAEAKNNKFIPIVFSFEDLEYIPVVLR 98
>gi|19923427|ref|NP_056339.2| (NM_015524) chromosome 6 open reading frame 5; chromosome 6 open reading frame 6 [Homo sapiens] gi|7688612|gb|AAF67447.1|AF136407_1 (AF136407) unknown [Homo sapiens] Length = 565 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/130 (23%), Positives = 67/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 400 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 456 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 457 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 516 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 517 KEHVPTWLQN 526
>gi|10257415|gb|AAG15407.1|AF272151_1 (AF272151) adaptor protein CIKS [Homo sapiens] Length = 574 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/130 (23%), Positives = 67/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 409 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 465 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 466 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 525 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 526 KEHVPTWLQN 535
>gi|22538428|ref|NP_679211.1| (NM_147686) chromosome 6 open reading frame 4 isoform 2; chromosome 6 open reading frame 6; chromosome 6 open reading frame 5; connection to IKK and SAPK/JNK; NFkB-activating protein ACT1 [Homo sapiens] gi|7512888|pir||T08794 hypothetical protein DKFZp586G0522.1 - human gi|4886511|emb|CAB43390.1| (AL050289) hypothetical protein [Homo sapiens] gi|7688610|gb|AAF67446.1|AF136406_1 (AF136406) unknown [Homo sapiens] gi|12803951|gb|AAH02823.1|AAH02823 (BC002823) DKFZP586G0522 protein [Homo sapiens] Length = 565 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/130 (23%), Positives = 67/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 400 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 456 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 457 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 516 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 517 KEHVPTWLQN 526
>gi|22538426|ref|NP_671733.1| (NM_147200) chromosome 6 open reading frame 4 isoform 1; chromosome 6 open reading frame 6; chromosome 6 open reading frame 5; connection to IKK and SAPK/JNK; NFkB-activating protein ACT1 [Homo sapiens] gi|13626146|sp|O43734|CIKS_HUMAN Adapter protein CIKS (Connection to IKK and SAPK/JNK) (Nuclear factor NF-kappa-B activator 1) (ACT1) Length = 574 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/130 (23%), Positives = 67/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 409 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 465 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 466 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 525 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 526 KEHVPTWLQN 535
>gi|2842416|emb|CAA15506.1| (AL008730) dJ487J7.1.1 (putative protein dJ487J7.1 isoform 1) [Homo sapiens] gi|7688608|gb|AAF67445.1|AF136405_1 (AF136405) unknown [Homo sapiens] gi|10242290|gb|AAG15367.1|AF274303_1 (AF274303) NFkB-activating protein ACT1 [Homo sapiens] Length = 574 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/130 (23%), Positives = 67/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 409 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 465 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 466 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 525 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 526 KEHVPTWLQN 535
>gi|10439491|dbj|BAB15507.1| (AK026602) unnamed protein product [Homo sapiens] Length = 389 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/130 (23%), Positives = 67/130 (50%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 224 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 280 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E ++ + RFIP++ Sbjct: 281 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAK 340 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 341 KEHVPTWLQN 350
>gi|21758050|dbj|BAC05236.1| (AK098107) unnamed protein product [Homo sapiens] Length = 555 Score = 38.1 bits (87), Expect = 0.031 Identities = 31/130 (23%), Positives = 66/130 (49%), Gaps = 15/130 (11%) Query: 1 MKKIFISYAWDEIEDEKVIKLAEMLEDYKEFEVSFDKW-DINKGQEVPLFMERGIQQSDF 59 ++K+FI+Y+ D + V+K L F+ + D + D +G ++ +MER ++ Sbjct: 390 LRKVFITYSMDTAME--VVKFVNFLL-VNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTV 446 Query: 60 VLIIC-SERYK---------VNADKRRGGSGYEARLMSDEVLRNEDKD-RFIPIILNEKD 108 ++I+ S +YK ++ D+ + Y R+M E + + RFIP++ Sbjct: 447 MIIVAISPKYKQDVEGAESQLDEDEHGLHTKYIHRMMQIEFISQGSMNFRFIPVLFPNAK 506 Query: 109 KKNIPNFLKS 118 K+++P +L++ Sbjct: 507 KEHVPTWLQN 516
>gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to Fgf genes [Mus musculus] Length = 710 Score = 34.7 bits (78), Expect = 0.32 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 12/92 (13%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ + + I + Sbjct: 329 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WAIQKIHE 386 Query: 57 SDFVLIICSERYKVNADKR----RGGSGYEAR 84 S F++++CS+ K DK+ +GGS EA+ Sbjct: 387 SQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQ 418
>gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane protein [Mus musculus] gi|21667508|gb|AAM74079.1|AF494210_1 (AF494210) interleukin 17 receptor-like protein long form [Mus musculus] Length = 738 Score = 34.7 bits (78), Expect = 0.32 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 12/92 (13%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ + + I + Sbjct: 357 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WAIQKIHE 414 Query: 57 SDFVLIICSERYKVNADKR----RGGSGYEAR 84 S F++++CS+ K DK+ +GGS EA+ Sbjct: 415 SQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQ 446
>gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expression to FGF protein [Mus musculus] Length = 582 Score = 34.7 bits (78), Expect = 0.36 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 12/92 (13%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ + + I + Sbjct: 201 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WAIQKIHE 258 Query: 57 SDFVLIICSERYKVNADKR----RGGSGYEAR 84 S F++++CS+ K DK+ +GGS EA+ Sbjct: 259 SQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQ 290
>gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 receptor-like protein short form [Mus musculus] Length = 594 Score = 34.3 bits (77), Expect = 0.43 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 12/92 (13%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ + + I + Sbjct: 213 KVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WAIQKIHE 270 Query: 57 SDFVLIICSERYKVNADKR----RGGSGYEAR 84 S F++++CS+ K DK+ +GGS EA+ Sbjct: 271 SQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQ 302
>gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling antagonist Sef [Danio rerio] Length = 745 Score = 33.5 bits (75), Expect = 0.77 Identities = 26/79 (32%), Positives = 42/79 (52%), Gaps = 8/79 (10%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 KIFI Y + D + VI+ A L+D+ EVS D W+ +GQ ++ R I + Sbjct: 356 KIFICYSSRDGAKHLAVIQSFAFFLQDFCGCEVSLDLWEHLEICKEGQMS--WLSRRIDE 413 Query: 57 SDFVLIICSERYKVNADKR 75 + F++ +CS+ K +KR Sbjct: 414 AHFIITVCSKGLKHFVEKR 432
>gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] Length = 745 Score = 33.5 bits (75), Expect = 0.77 Identities = 26/79 (32%), Positives = 42/79 (52%), Gaps = 8/79 (10%) Query: 3 KIFISY-AWDEIEDEKVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 KIFI Y + D + VI+ A L+D+ EVS D W+ +GQ ++ R I + Sbjct: 356 KIFICYSSRDGAKHLAVIQSFAFFLQDFCGCEVSLDLWEHLEICKEGQMS--WLSRRIDE 413 Query: 57 SDFVLIICSERYKVNADKR 75 + F++ +CS+ K +KR Sbjct: 414 AHFIITVCSKGLKHFVEKR 432
>gi|21223984|ref|NP_629763.1| (NC_003888) putative ATP /GTP-binding protein [Streptomyces coelicolor A3(2)] gi|7480482|pir||T35469 probable ATP /GTP-binding protein - Streptomyces coelicolor gi|3319757|emb|CAA19923.1| (AL031035) putative ATP /GTP-binding protein [Streptomyces coelicolor A3(2)] Length = 886 Score = 32.7 bits (73), Expect = 1.3 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 10/98 (10%) Query: 33 VSFDKWDINKGQEVPLFMERGIQQSDFVLIICSERYKVNADKRRGGSGYEARLMSDEVLR 92 V D WD G + M+ ++++D V+ + S Y D+R + A + Sbjct: 34 VILDVWDWRTGDNLVQRMDEALERADAVIALFSTSY--FEDERWTTEEWTAAVAH----- 86 Query: 93 NEDKDRFIPIILNEKDKKNIPNFLKSKLWTELYHDEQS 130 +DR IP+ L ++P L +KL L+ ++S Sbjct: 87 ---RDRLIPLALEPLTTSDLPRVLAAKLRKNLHGLDES 121
>gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 receptor-like protein long form [Homo sapiens] Length = 739 Score = 32.3 bits (72), Expect = 1.5 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 8/79 (10%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ ++ + I + Sbjct: 357 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WVIQKIHE 414 Query: 57 SDFVLIICSERYKVNADKR 75 S F++++CS+ K DK+ Sbjct: 415 SQFIIVVCSKGMKYFVDKK 433
>gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sapiens] Length = 739 Score = 32.3 bits (72), Expect = 1.5 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 8/79 (10%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ ++ + I + Sbjct: 357 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WVIQKIHE 414 Query: 57 SDFVLIICSERYKVNADKR 75 S F++++CS+ K DK+ Sbjct: 415 SQFIIVVCSKGMKYFVDKK 433
>gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro cis trans isomerase [Homo sapiens] Length = 526 Score = 32.3 bits (72), Expect = 1.6 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 8/79 (10%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ ++ + I + Sbjct: 144 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WVIQKIHE 201 Query: 57 SDFVLIICSERYKVNADKR 75 S F++++CS+ K DK+ Sbjct: 202 SQFIIVVCSKGMKYFVDKK 220
>gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - human (fragment) gi|6453552|emb|CAB61408.1| (AL133097) hypothetical protein [Homo sapiens] Length = 564 Score = 32.3 bits (72), Expect = 1.7 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 8/79 (10%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ ++ + I + Sbjct: 182 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WVIQKIHE 239 Query: 57 SDFVLIICSERYKVNADKR 75 S F++++CS+ K DK+ Sbjct: 240 SQFIIVVCSKGMKYFVDKK 258
>gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 receptor-like protein short form [Homo sapiens] gi|21739454|emb|CAD38769.1| (AL833913) hypothetical protein [Homo sapiens] Length = 595 Score = 32.0 bits (71), Expect = 2.0 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 8/79 (10%) Query: 3 KIFISYAWDEIEDE-KVIK-LAEMLEDYKEFEVSFDKWD----INKGQEVPLFMERGIQQ 56 K+F+ Y+ + ++ V++ A L+D+ EV+ D W+ +GQ ++ + I + Sbjct: 213 KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQRE--WVIQKIHE 270 Query: 57 SDFVLIICSERYKVNADKR 75 S F++++CS+ K DK+ Sbjct: 271 SQFIIVVCSKGMKYFVDKK 289
>gi|15235118|ref|NP_192784.1| (NM_117114) putative retrotransposon; protein id: At4g10460.1 [Arabidopsis thaliana] gi|7444416|pir||T04181 hypothetical protein F7L13.40 - Arabidopsis thaliana gi|4539406|emb|CAB40039.1| (AL049524) putative retrotransposon [Arabidopsis thaliana] gi|7267743|emb|CAB78169.1| (AL161517) putative retrotransposon [Arabidopsis thaliana] Length = 1230 Score = 31.2 bits (69), Expect = 3.3 Identities = 23/78 (29%), Positives = 40/78 (50%), Gaps = 8/78 (10%) Query: 73 DKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDK----KNIPN--FLKSKLWTELYH 126 +KR+ +SD+VLR K++ P +L DK K +PN +LK KL++ Y Sbjct: 67 EKRQKARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIYLKQKLYS--YK 124 Query: 127 DEQSMEYNNQLDDLLATI 144 ++++ +D+ L I Sbjct: 125 MQENLSVEGNIDEFLRLI 142
>gi|15893644|ref|NP_346993.1| (NC_003030) 2,3-cyclic-nucleotide 2'phosphodiesterase (duplication) [Clostridium acetobutylicum] gi|15023199|gb|AAK78333.1|AE007549_13 (AE007549) 2,3-cyclic-nucleotide 2'phosphodiesterase (duplication) [Clostridium acetobutylicum] Length = 1193 Score = 31.2 bits (69), Expect = 3.4 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Query: 62 IICSERYKVNADKRRGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKLW 121 IICS Y N D +G ++ + + ++ + FI I NE P+++ K++ Sbjct: 142 IICSNLYNKNPDGSKGSRVFDPYKI---ITKDGVRIAFIGGITNETPNIVTPSYVSDKIF 198 Query: 122 TELYHDEQS----MEYNNQLDDLLATI 144 T+L + S ++ NN+ D ++A + Sbjct: 199 TDLATEINSVASDIKNNNKADVIIAVV 225
>gi|14590719|ref|NP_142789.1| (NC_000961) transport protein [Pyrococcus horikoshii] gi|7445548|pir||G71136 probable transport protein - Pyrococcus horikoshii gi|3257270|dbj|BAA29953.1| (AP000003) 590aa long hypothetical transport protein [Pyrococcus horikoshii] Length = 590 Score = 31.2 bits (69), Expect = 3.5 Identities = 13/52 (25%), Positives = 31/52 (59%) Query: 12 EIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFVLII 63 E+E E +++ +++DY F++ + +I KG+ + + GI ++ FV ++ Sbjct: 333 EVERETLVEYPRLVKDYGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKML 384
>gi|15387737|emb|CAC59865.1| (AL160371) possible monooxygenase [Leishmania major] Length = 655 Score = 31.2 bits (69), Expect = 3.6 Identities = 17/66 (25%), Positives = 30/66 (44%) Query: 76 RGGSGYEARLMSDEVLRNEDKDRFIPIILNEKDKKNIPNFLKSKLWTELYHDEQSMEYNN 135 RG SG R ++D+ L E + P I + ++ N + W LY + Y+ Sbjct: 561 RGSSGDALRELTDKCLYYERRKHVSPFIRFQNLYQHFLNVCMPRGWNTLYEGSVNHVYSR 620 Query: 136 QLDDLL 141 ++D+L Sbjct: 621 SIEDML 626
>gi|18977042|ref|NP_578399.1| (NC_003413) RNase l inhibitor [Pyrococcus furiosus DSM 3638] gi|18892677|gb|AAL80794.1| (AE010187) RNase l inhibitor [Pyrococcus furiosus DSM 3638] Length = 590 Score = 31.2 bits (69), Expect = 3.7 Identities = 14/52 (26%), Positives = 29/52 (54%) Query: 12 EIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFVLII 63 EIE E ++ +++DY F + + +I KG+ + + GI ++ FV ++ Sbjct: 333 EIERETLVTYPRLVKDYGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKML 384
>gi|15224102|ref|NP_179998.1| (NM_127982) myrcene/ocimene synthase; protein id: At2g24210.1 [Arabidopsis thaliana] gi|4115381|gb|AAD03382.1| (AC005967) putative limonene cyclase [Arabidopsis thaliana] Length = 591 Score = 31.2 bits (69), Expect = 4.0 Identities = 12/26 (46%), Positives = 19/26 (72%) Query: 25 LEDYKEFEVSFDKWDINKGQEVPLFM 50 LE+ + F V+F+ WDIN+ E+P +M Sbjct: 348 LEELQLFTVAFENWDINRLDELPEYM 373
>gi|9957293|gb|AAG09310.1|AF178535_1 (AF178535) myrcene/ocimene synthase [Arabidopsis thaliana] Length = 555 Score = 30.8 bits (68), Expect = 5.0 Identities = 12/26 (46%), Positives = 19/26 (72%) Query: 25 LEDYKEFEVSFDKWDINKGQEVPLFM 50 LE+ + F V+F+ WDIN+ E+P +M Sbjct: 312 LEELQLFTVAFENWDINRLDELPEYM 337
>gi|1688311|gb|AAB36954.1| (U78608) Rep protein [Paenibacillus popilliae] Length = 370 Score = 30.0 bits (66), Expect = 7.2 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 89 EVLRNEDKDRFIP---IILNEKDKKNIPNFLKSKLWTELYHDEQSMEYNNQLD 138 EV N+DKD + P ++L N++K W+EL+ D ++Y+ +D Sbjct: 187 EVTYNKDKDTYHPHYHVLLAVTPDYFTRNYIKKSEWSELWRDAARLDYDPVVD 239
>gi|14521449|ref|NP_126925.1| (NC_000868) RNASE L INHIBITOR [Pyrococcus abyssi] gi|7445549|pir||F75032 rnase l inhibitor PAB0824 - Pyrococcus abyssi (strain Orsay) gi|5458668|emb|CAB50155.1| (AJ248287) RNASE L INHIBITOR [Pyrococcus abyssi] Length = 593 Score = 30.0 bits (66), Expect = 7.6 Identities = 12/52 (23%), Positives = 31/52 (59%) Query: 12 EIEDEKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPLFMERGIQQSDFVLII 63 ++E E +++ +++DY F++ + +I KG+ + + GI ++ FV ++ Sbjct: 337 DVERETLVEYPRLVKDYGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKML 388
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 4, 2002 12:20 AM Number of letters in database: 330,426,180 Number of sequences in database: 1,044,513 Lambda K H 0.317 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,389,293 Number of Sequences: 1044513 Number of extensions: 3932919 Number of successful extensions: 10916 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 44 Number of HSP's that attempted gapping in prelim test: 10902 Number of HSP's gapped (non-prelim): 54 length of query: 150 length of database: 330,426,180 effective HSP length: 110 effective length of query: 40 effective length of database: 215,529,750 effective search space: 8621190000 effective search space used: 8621190000 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 66 (30.0 bits)