Pig2_Yeast SKSVHFD-----RVLPIKLFNE-NEKPIDVG Gip2_Yeast SKSVHFD-----QAAPVKYFAE-DESPINVN GAC1 EKNVRFA----IELTTVKRFDK-NAEPSSIS PIG1 GKSVRFA----AHLYTVKKFNT-KLAPISIS Rg1 GRRVSFADNFGFNLVSVKEFDT-WELPSVST Hgl TRRVSFADSFGFNLVSVKEFDC-WELPSAST Rgl KKRVSFADNQGLALTMVKVFSE-FDDPLDIP Ptg KKRVVFADSKGLSLTAIHVFSD-LPEEPAWD Cgl RKSVRFADDCGHELYMVRVATEPSNCPPKLS
PIG2_YEAST MVIIGKVFVKNIYFD----KKIIVRYT----WDAWRTFH
GIP2_YEAST RLIAGRILVKNIFYD----KRVVVRYT----WDSWRTTH
GAC1_YEAST SKITGLVYVKNLSFE----KYLEIKFT----FNSWRDIH
PIG1_YEAST CQIWGLIFVNNLNFE----KKIEIKFT----LNNWADIH
RG1 TSMKGIIRVLNISFE----KLVYVRMS----LDDWQTHY
hGl TSIKGIIRVLNVSFE----KLVYVRMS----LDDWQTHY
PTG RTVTGTVKVKNVSFE----KKVQVRIT----FDTWKTYT
rGl KAIAGTVKVQNLAFE----KVVKIRMT----FDTWKSFT
cGl YKVMGTIKVGNIAFE----KSVFVRYT----MNGWISYM
AMYG_RHIOR STFSGKIYVKNIAYS----KKVTVIYAD--GSDNWNNNG
amy_cloab2 SGNNFTIYYNGNLAN---SSNVSLHWG----VNGWS---
amy_cloab3 ACKQISVYYNGSLAS--SASNITLHWG----CNGFT---
amy_cloab1 AGDSVTITYDAGTTALKDASNVNLYWG----YDGFS---
bsg6ama_1 QANDITIYYKT-SWT-----NPHIHYSL--NQEAWT---
ucdsmamy_1 EGNLVTIYYKK-GFD-----TPYMHYRP--EGGEWT---
amyb_bacp2 TTNKVTVYYKK-GFN-----SPYIHYRP--AGGSWT---
bpamyb_1 TTNKVTVYYKK-GFN-----SPYIHYRP--AGGSWT---
amyb_bacp1 TGNKVTIYYKK-GFN-----SPYIHYRP--AGGSWT---
amyb_bacci PVNSVTIYYKK-GFN-----SPYIHYRP--AGGTWT---
slamlc_21 PGNTATVFYYTKTKN---WDRYNLHYAP--DGGSWT---
slamlc_22 DGNRATVYYSTRTLG---WTTANIHYRP--AGGSWT---
1cgt DQVTVRFVVNNASTT---LGQNLYLTGNVAELGNWSTGS
1kul TAVAVTFDLT-ATTT---YGENIYLVGSISQLGDWET-S
BS22045_1 KTSNVTFTVNNATTT---SGQNVYVVANIPELGNWNT--
AMYB_BACCE VPLLSTIVVKNLPTT---IGDTVYITGSRAELGSWTQN-
*********
motif 1
PIG2_YEAST ESECVYFSNANGILPGSNMDIFKFSIDDIH---------------NPNDKDSNISQLEFC
GIP2_YEAST EVECVYISDGDGILPGTNMDIFHFIIDDVS--------------KVDP-----RGKLEFC
GAC1_YEAST YVTANF--NRTI---NSNVDEFKFTIDLNSLKYILLIKRII---TMEKNTSSCPLNIELC
PIG1_YEAST YINAHY--NKSV---TPHVDEFKFIIDISALKLNLISKNLIYTNFFERKT-TCLLNLQFC
RG1 DILAEYVPNSCD----GETDQFSFKISLVP--------------PYQKD----GSKVEFC
hGl DILAEYVPNSCD----GETDQFSFKIVLVP--------------PYQKD----GSKVEFC
PTG DVDCVYMKNVYS---SSDSDTFSFAIDLPR--------------VIPT-----EEKIEFC
rGl DFPCQYVKDTYA---GSDRDTFSFDISLPE--------------KIQS-----YERMEFA
cGl DKAAIYQPST-----SKIQDTFKFDLDLPS--------------SVEK---LQIHQIEFC
AMYG_RHIOR NTIAASYSAPIS---GSNYEYWTFSASING-------------------------IKEFY
amy_cloab2 --NMQNLAMV-----KDSNGFWEATIAIPA------------------------SSNTLN
amy_cloab3 --SPQDINMV-----KQADGRWLANITLPS------------------------GCYNVN
amy_cloab1 --AATSKAMT-----SLGDNKWQTTITVPK-----------------------EVTKNVN
bsg6ama_1 --TLPGVPLN-----SSEYEGY-AKITIET-----------------------EEGSQLR
ucdsmamy_1 --IVPGIRME-----ESEIAGY-SKLTVDI-----------------------REASKLE
amyb_bacp2 --AAPGVKMQ-----DAEISGY-AKITVDI-----------------------GSASQLE
bpamyb_1 --AAPGVKMQ-----DAEISGY-AKITVDI-----------------------GSASQLE
amyb_bacp1 --AAPGVKMQ-----DAEISGY-AKITVDI-----------------------GSASQLE
amyb_bacci --DVPGVKMP-----DSEISGY-AKITLDI-----------------------GSASQLE
slamlc_21 --EVPGVAM------EAACTDW-VKRTVPL-----------------------GSAEGLR
slamlc_22 --AVPGVGM------RAACAGW-WKKDVDL-----------------------GAATSLT
1cgt TAIGPAFNQV-----IHQYPTWYYDVSVPA-----------------------GKQLEFK
1kul DGIALSADKY-----TSSDPLWYVTVTLPA-----------------------GESFEYK
BS22045_1 ---ANAIKMN-----PSSYPTWKATIALPQ-----------------------GKAIEFK
AMYB_BACCE ---ISTSLYY-----DSHSNDWRGNVVLPA-----------------------ERNIEFK
PIG2_YEAST IQYLTWGVDRSRKEYWDNNDSANYKI------DVVTNETRT-
GIP2_YEAST IHYSTRN-DYEREEYWDNNNGNNYKV------DVVMDGFN--
GAC1_YEAST CRYDVNN-----ETYYDNNNGKNYHL------FMTTFKKGGE
PIG1_YEAST CRYDVNGFEY--RSFYDNNDYKNYEI------TISLSAINLN
RG1 IRYETSV-----GTFWSNNNGTNYTL------VCQKKEPEP-
hGl IRYETSV-----GTFWSNNNGTNYTF------ICQKKEQEP-
PTG ISYHANG-----RIFWDNNEGQNYRI------VHVQWKPDGV
rGl VCYECNG-----QSYWDSNKGKNYRI------TRAELRSTQ-
cGl ICFKANG-----TEYWDSNSGTNYVL------HCEQQQ----
AMYG_RHIOR IKYEVSG-----KTYYDNNNSANYQV------STSKPTTT--
amy_cloab2 FCFTNG------SS-WDNNNNNNWTL--------NT------
amy_cloab3 MAFKDQ------SGTWDNNNSNNYNF--------SSTNN---
amy_cloab1 FSFTDG------TS-WDNNNGANWNIP----LASNYLPHG--
bsg6ama_1 AAFNNG------RGQWDNNQGRDYVFH----SGINTLADGVI
ucdsmamy_1 VAFNNG------RGAWDSDQENNYLFE----PGVHTYIPSHE
amyb_bacp2 AAFNDG------NNNWDSNNTKNYLFS----TGTSTYTPGSN
bpamyb_1 AAFNDG------NNNWDSNNTKNYLFS----TGTSTYTPGSN
amyb_bacp1 AAFNDG------NNNWDSNNTKNYSFS----TGTSTYTPGNS
amyb_bacci AAFNDG------NNQWDSNNMRNYFFS----PGTSTYIPGTN
slamlc_21 ATFNNG------SGTWDNNGGENYALG----TGALTVKDGVV
slamlc_22 AAFNNG------NGVWDNNKGADYTLP----AGVTTVADNTV
1cgt FFKKNGS-----TITWESGSNHTFTTP---ASGTATVTVNWQ
1kul FIRIESDD----SVEWESDPNREYTVPQACGTSTATVTDTWR
BS22045_1 FIKKDQAG----NVIWESTSNRTYTVP---FSSTGSYTASWN
AMYB_BACCE AFIKSKDGR---VKSWQTIQQSWNPVP----LKTTSHTSSW-
**********
motif 2
Last modified: Feb 11 2000