BLASTP 2.2.6 [Apr-09-2003]

RID: 1063621798-10294-459985.BLASTQ3

Query= At1g15790
         (179 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,523,846 sequences; 490,609,399 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22329593|ref|NP_173031.2|  expressed protein [Arabidopsis...   329   1e-89
gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis...   120   1e-26
gi|25511635|pir||B86292  F7H2.12 protein - Arabidopsis thali...   104   6e-22
gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trif...   100   1e-20
gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japo...    97   1e-19
gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trif...    95   6e-19
gi|27260984|dbj|BAC45101.1|  OJ1705_C03.23 [Oryza sativa (ja...    40   0.019
gi|32489490|emb|CAE03805.1|  OSJNBa0027H09.5 [Oryza sativa (...    36   0.22 
gi|7493813|pir||T18235  transcription activator GAL11 homolo...    35   0.46 

Alignments

>gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thaliana]
 gi|25513497|pir||C86292 F7H2.13 protein - Arabidopsis thaliana
 gi|8927658|gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene.
           [Arabidopsis thaliana]
 gi|12083256|gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana]
          Length = 179

 Score =  329 bits (843), Expect = 1e-89
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
           MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ
Sbjct: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60

Query: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120
           TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS
Sbjct: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120

Query: 121 RQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLGKISLKMRTM 179
           RQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLGKISLKMRTM
Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLGKISLKMRTM 179



>gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score =  120 bits (300), Expect = 1e-26
 Identities = 69/115 (60%), Positives = 79/115 (68%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQT+Y
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118
           LR+I MKML METKSQNAAGSS+A           S+P N+  +  G   T Q Q
Sbjct: 79  LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQ 133



 Score =  101 bits (251), Expect = 6e-21
 Identities = 53/82 (64%), Positives = 65/82 (79%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL RIA   EE 
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEK 67

Query: 158 IFNSAINQEDYLGKISLKMRTM 179
           IF+ A+NQ DYL KIS+KM TM
Sbjct: 68  IFSGALNQTDYLRKISMKMLTM 89



>gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana
 gi|8927657|gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
          Length = 1366

 Score =  104 bits (260), Expect = 6e-22
 Identities = 69/146 (47%), Positives = 79/146 (54%), Gaps = 31/146 (21%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQ   
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78

Query: 61  ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                                       T+YLR+I MKML METKSQNAAGSS+A     
Sbjct: 79  RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138

Query: 93  PLVPEPSVPNNEPAVNTGDWRTQQPQ 118
                 S+P N+  +  G   T Q Q
Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQ 164



 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 53/113 (46%), Positives = 65/113 (57%), Gaps = 31/113 (27%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL RIA   EE 
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEK 67

Query: 158 IFNSAINQE-------------------------------DYLGKISLKMRTM 179
           IF+ A+NQ                                DYL KIS+KM TM
Sbjct: 68  IFSGALNQRFVRQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM 120



>gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score =  100 bits (249), Expect = 1e-20
 Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 5/88 (5%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
          DWR      SR RIVNKIM+T  + LPF  PEG NEL++IA RFEEK+F +A++Q++YLR
Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75

Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPP 93
          +I +KML+ME++SQNA+GS     N PP
Sbjct: 76 KISLKMLSMESRSQNASGS-----NEPP 98



 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 51/73 (69%)

Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQE 166
           ++  DWR     DSRQ+ +N ++DTLK+ +P SG EG++EL RIA   EE IF SA +Q 
Sbjct: 12  LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQS 71

Query: 167 DYLGKISLKMRTM 179
           DYL KISLKM +M
Sbjct: 72  DYLRKISLKMLSM 84



>gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 50/89 (56%), Positives = 67/89 (75%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64
           GDWR+Q  S +R+RIVNKIM+T  K LP   PEG NEL+KIAVRFEEK++  A++Q++YL
Sbjct: 35  GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94

Query: 65  RQICMKMLNMETKSQNAAGSSSADDNTPP 93
           R+I +KML+METK+Q   G++    N  P
Sbjct: 95  RKISLKMLSMETKTQQNPGNAQVIQNQNP 123



 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 11/104 (10%)

Query: 76  TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKI 135
           T+  + A S   D N P            PA+  GDWR+Q   ++R + +N ++DTLKK 
Sbjct: 12  TQGADPAASGGIDPNAPA-----------PALAGGDWRSQLQSEARNRIVNKIMDTLKKH 60

Query: 136 VPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLGKISLKMRTM 179
           +P S  EG++EL +IAV  EE I+ +A +Q DYL KISLKM +M
Sbjct: 61  LPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSM 104



>gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score = 94.7 bits (234), Expect = 6e-19
 Identities = 51/87 (58%), Positives = 66/87 (75%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ    SR RIVNKIM+T  + LPF   +G NEL+KIA RFEEK++  AS+Q++Y
Sbjct: 34  TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDN 90
           LR+I +KML+ME+KSQNA  +S   +N
Sbjct: 94  LRKISLKMLSMESKSQNAMPNSLQSNN 120



 Score = 80.1 bits (196), Expect = 1e-14
 Identities = 42/82 (51%), Positives = 60/82 (73%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157
           P+ P  E  ++TGDWRTQ   DSRQ+ +N ++DTLK+ +P SG++G++EL +IA   EE 
Sbjct: 23  PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEK 82

Query: 158 IFNSAINQEDYLGKISLKMRTM 179
           I+ +A +Q DYL KISLKM +M
Sbjct: 83  IYTAASSQSDYLRKISLKMLSM 104



>gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)]
          Length = 414

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 22/64 (34%), Positives = 37/64 (57%)

Query: 111 DWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLG 170
           DWRT+  QD R +    +L +L+  +  +    + +L ++A  +EE I+  AI+  DYL 
Sbjct: 12  DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71

Query: 171 KISL 174
           +ISL
Sbjct: 72  RISL 75



 Score = 37.0 bits (84), Expect = 0.17
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
          DWRT+     R R+   I+ +   +L         +L+K+A R EE+++  A +  +YLR
Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71

Query: 66 QICM 69
          +I +
Sbjct: 72 RISL 75



>gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japonica cultivar-group)]
          Length = 1392

 Score = 36.2 bits (82), Expect = 0.22
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)

Query: 7   WRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQ 66
           W        R  I+N +++  +      +     E++  A+R E+   N  +N+ +YLR 
Sbjct: 19  WMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNKTTNKEDYLRC 78

Query: 67  ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPS 99
           I  +++NME K +    S S    T P    PS
Sbjct: 79  IAQRIMNMEMKVRR---SQSLQAGTTPSTQRPS 108



>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans]
          Length = 1145

 Score = 35.4 bits (80), Expect = 0.46
 Identities = 17/68 (25%), Positives = 37/68 (54%)

Query: 112 WRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLGK 171
           WR     + RQK +  +++TL ++   +    +  L ++A   E+L++  + ++EDYL  
Sbjct: 23  WRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLRA 82

Query: 172 ISLKMRTM 179
           I +K+  +
Sbjct: 83  IKMKVHQL 90



 Score = 34.3 bits (77), Expect = 0.94
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 7   WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65
           WR  +    R ++V  I+ T L +L    P      L K+A  FE+ ++  ++++ +YLR
Sbjct: 23  WRAMYSGEERQKVVQIIINT-LTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81

Query: 66  QICMKMLNMETKSQNAAGSSSADDN 90
            I MK+  +  + Q  A +     N
Sbjct: 82  AIKMKVHQLRVQKQQIAANQGGQIN 106





  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Sep 14, 2003  6:30 PM
  Number of letters in database: 490,609,399
  Number of sequences in database:  1,523,846
  
Lambda     K      H
   0.312    0.129    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,574,244
Number of Sequences: 1523846
Number of extensions: 676831
Number of successful extensions: 1893
Number of sequences better than  1.0: 0
Number of HSP's better than  1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1893
Number of HSP's gapped (non-prelim): 0
length of query: 179
length of database: 490,609,399
effective HSP length: 116
effective length of query: 63
effective length of database: 313,843,263
effective search space: 19772125569
effective search space used: 19772125569
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)