RID=1063388321-20316-1501736.BLASTQ3, gi|18394390|ref|NP_564004_1| expressed protein [Arabidopsis thaliana]

RID=1063388321-20316-1501736.BLASTQ3, gi|18394390|ref|NP_564004_1| expressed protein [Arabidopsis thaliana] BLASTP 2.2.6 [Apr-09-2003]

RID: 1063388321-20316-1501736.BLASTQ3

Query= gi|18394390|ref|NP_564004_1| expressed protein
[Arabidopsis thaliana]
         (128 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,522,899 sequences; 490,308,901 total letters

Distribution of 7 Blast Hits on the Query Sequence


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18394390|ref|NP_564004.1|  expressed protein [Arabidopsis...   231   1e-60
gi|25518480|pir||D86302  hypothetical protein F17F16.9 - Ara...   219   9e-57
gi|7487910|pir||T01055  hypothetical protein YUP8H12R.38 - A...   126   6e-29
gi|15219327|ref|NP_173115.1|  expressed protein [Arabidopsis...   125   9e-29
gi|18412221|ref|NP_565197.1|  p300/CBP acetyltransferase-rel...   125   1e-28
gi|15230656|ref|NP_187904.1|  CREB-binding protein -related ...    61   4e-09
gi|21105779|gb|AAM34787.1|AF512558_1  HAC5 [Arabidopsis thal...    57   4e-08

Alignments

>gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thaliana]
 gi|21618240|gb|AAM67290.1| unknown [Arabidopsis thaliana]
          Length = 128

 Score =  231 bits (590), Expect = 1e-60
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP
Sbjct: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN 120
           STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN
Sbjct: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN 120

Query: 121 LKSVSLEP 128
           LKSVSLEP
Sbjct: 121 LKSVSLEP 128



>gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana
 gi|9954735|gb|AAG09088.1|AC026237_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 238

 Score =  219 bits (557), Expect = 9e-57
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP
Sbjct: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM 105
           STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM
Sbjct: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM 105



>gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana
 gi|3152587|gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D.
           melanogaster and contains similarity to
           callus-associated protein gb|U01961 from Nicotiana
           tabacum.  EST gb|W43427 comes from this gene.
           [Arabidopsis thaliana]
          Length = 1516

 Score =  126 bits (317), Expect = 6e-29
 Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 1/99 (1%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           +DND+ ++R++MR  IF  L+++ P P D+ASK K++D A+RLEEGLFK+A TKE+Y+NP
Sbjct: 44  VDNDILKLRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNP 103

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV 99
           STLE RL SLIKGRQLN Y  +HA+SS++GT I PTPG+
Sbjct: 104 STLEPRLASLIKGRQLNNYNQRHANSSSVGTMI-PTPGL 141



>gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thaliana]
          Length = 1706

 Score =  125 bits (315), Expect = 9e-29
 Identities = 60/100 (60%), Positives = 82/100 (82%), Gaps = 1/100 (1%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           MD+D+ ++R+ M+  +F  L++R P P D ASK K++D A+RLEEGLFKMA+TKE+Y+N 
Sbjct: 66  MDHDIMKLRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNR 125

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100
           STLESR+TSLIKGRQ+N Y  +HA+SS++GT I PTPG+S
Sbjct: 126 STLESRITSLIKGRQINNYNQRHANSSSVGTMI-PTPGLS 164



>gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
 gi|12597461|gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
          Length = 1654

 Score =  125 bits (315), Expect = 1e-28
 Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 1/99 (1%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           +DND+ ++R++MR  IF  L+++ P P D+ASK K++D A+RLEEGLFK+A TKE+Y+NP
Sbjct: 44  VDNDILKLRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNP 103

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV 99
           STLE RL SLIKGRQLN Y  +HA+SS++GT I PTPG+
Sbjct: 104 STLEPRLASLIKGRQLNNYNQRHANSSSVGTMI-PTPGL 141



>gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana]
 gi|15795129|dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana]
          Length = 1670

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           +  D   +R+ M +  +  L++R P   DDASK K  + AKRLE  +++ A +KE+YL+ 
Sbjct: 36  ISQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDF 95

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100
            + + R+ S +K  QL     + A+ S+  +T+  TPGVS
Sbjct: 96  RSFDVRVESTLK--QL--LSQRRANPSSSVSTMVQTPGVS 131



>gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana]
          Length = 453

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 1   MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60
           +  D   +R+ M +  +  L++R P   DDASK K  + AKRLE  +++ A +KE+YL+ 
Sbjct: 5   ISQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDF 64

Query: 61  STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100
            + + R+ S +K  QL     + A+ S+  +T+  TPGVS
Sbjct: 65  RSFDVRVESTLK--QL--LSQRRANPSSSVSTMVQTPGVS 100





  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Sep 11, 2003  1:15 AM
  Number of letters in database: 490,308,901
  Number of sequences in database:  1,522,899
  
Lambda     K      H
   0.310    0.128    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,961,539
Number of Sequences: 1522899
Number of extensions: 818008
Number of successful extensions: 2087
Number of sequences better than  1.0: 1
Number of HSP's better than  1.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2086
Number of HSP's gapped (non-prelim): 1
length of query: 128
length of database: 490,308,901
effective HSP length: 104
effective length of query: 24
effective length of database: 331,927,405
effective search space: 7966257720
effective search space used: 7966257720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 74 (33.1 bits)