>gi|17508323|ref|NP_493339.1| CREB-binding protein like family member (80.3 kD) (1N890)
[Caenorhabditis elegans]
gi|7505888|pir||T23651 hypothetical protein M01E5.6 - Caenorhabditis elegans
gi|3878635|emb|CAB07643.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans]
gi|3879438|emb|CAB03290.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans]
Length = 702
Score = 1273 bits (3293), Expect = 0.0
Identities = 653/702 (93%), Positives = 653/702 (93%)
Query: 1 MTPLSALTSNPAPSPPPKFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGDLIPHKCLIC 60
MTPLSALTSNPAPSPPPKFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGDLIPHKCLIC
Sbjct: 1 MTPLSALTSNPAPSPPPKFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGDLIPHKCLIC 60
Query: 61 QPILTEKHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPA 120
QPILTEKHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPA
Sbjct: 61 QPILTEKHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPA 120
Query: 121 FLVKGNVVVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRW 180
FLVKGNVVVALNGPEGELVVIERDCRGLLSKESTSYGQF QDLERDRW
Sbjct: 121 FLVKGNVVVALNGPEGELVVIERDCRGLLSKESTSYGQFRTLPTAALRTLTLQDLERDRW 180
Query: 181 DRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEY 240
DRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEY
Sbjct: 181 DRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEY 240
Query: 241 IDETGDFQKISCTLCTCEVTESNLIPLYVERNASELVIHVHNTENNQIEQYIYDVRTFGF 300
IDETGDFQKISCTLCTCEVTESNLIPLYVERNASELVIHVHNTENNQIEQYIYDVRTFGF
Sbjct: 241 IDETGDFQKISCTLCTCEVTESNLIPLYVERNASELVIHVHNTENNQIEQYIYDVRTFGF 300
Query: 301 VQVKRNLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSGSGGFEKMQPVAV 360
VQVKRNLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSGSGGFEKMQPVAV
Sbjct: 301 VQVKRNLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSGSGGFEKMQPVAV 360
Query: 361 KTFQVQWVEMKTEFEKKKASTERVEPQHPVQTEGEDIMETVLAMVESFNCDLRKELGLTQ 420
KTFQVQWVEMKTEFEKKKASTERVEPQHPVQTEGEDIMETVLAMVESFNCDLRKELGLTQ
Sbjct: 361 KTFQVQWVEMKTEFEKKKASTERVEPQHPVQTEGEDIMETVLAMVESFNCDLRKELGLTQ 420
Query: 421 DQEIPRKAPRVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYGYQELDDTMSEGL 480
DQEIPRKAPRVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYGYQELDDTMSEGL
Sbjct: 421 DQEIPRKAPRVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYGYQELDDTMSEGL 480
Query: 481 LEKEAESKHQDANEPEPVKNVTYEPDVAAMDXXXXXXXXXXXXXXINAQIDELEKRRMER 540
LEKEAESKHQDANEPEPVKNVTYEPDVAAMD INAQIDELEKRRMER
Sbjct: 481 LEKEAESKHQDANEPEPVKNVTYEPDVAAMDKKKKRRELKSRLNKINAQIDELEKRRMER 540
Query: 541 AGKKXXXXXXXXXXXXXXXXXXXXXXLAENTNQISNEETPKIDIFEGYNGSFLFGTNTSK 600
AGKK LAENTNQISNEETPKIDIFEGYNGSFLFGTNTSK
Sbjct: 541 AGKKQVVSSSVPSEEAAQVEAPASPALAENTNQISNEETPKIDIFEGYNGSFLFGTNTSK 600
Query: 601 EWIVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR 660
EWIVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR
Sbjct: 601 EWIVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR 660
Query: 661 LMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKNHEKN 702
LMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKNHEKN
Sbjct: 661 LMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKNHEKN 702
>gi|17508853|ref|NP_493341.1| putative cytoplasmic protein family member, with a coiled coil-4
domain (1N899) [Caenorhabditis elegans]
gi|7507091|pir||T24456 hypothetical protein T04D3.2 - Caenorhabditis elegans
gi|3879434|emb|CAB03286.1| Hypothetical protein T04D3.2 [Caenorhabditis elegans]
Length = 604
Score = 188 bits (478), Expect = 2e-46
Identities = 133/383 (34%), Positives = 191/383 (49%), Gaps = 23/383 (6%)
Query: 13 PSPPPKFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGDLIPHKCLICQPILTEKHISPY 72
P P PKFA+G CP T + V R + + + L+PHKCL CQ +TE + P
Sbjct: 79 PRPLPKFAMGNCPVTRTRTIGVQRFGQYYMFNKHPASPKLVPHKCLQCQARVTEADLYPK 138
Query: 73 YAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPAFLVKGNVVVALN 132
Y+V + V+F +N +T K+EQ+ Y+ T FVEV+ PE+ YNP+ + GN+VV +
Sbjct: 139 YSVVCNKTSTLVIFVHNGITNKIEQYAYSHSTGGFVEVSFPELVYNPSLVTHGNLVVVIK 198
Query: 133 GPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLER--DRWDRAANSDEV- 189
G + E +VIERD RG + K+S+ G F Q++E+ D N D
Sbjct: 199 GLKNENIVIERDLRGGIRKQSSHLGPFQAIPPVVVRTLMMQEIEKGIDVTGNPENPDSAV 258
Query: 190 ----------KISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLE 239
+ + D Y +LP F+VR C KE +CV + +G+Y +
Sbjct: 259 ESDYDSEEDDEDEDDEDDLDVDDLNYLDSLPTFKVRICQASQKEVVCVINSCNGNYIKYI 318
Query: 240 YIDETGDFQKISCTLCTCEVTESNLIPLYVE--RNASELVIHVHNTENNQIEQYIYDVRT 297
Y D TG+F T EVTE +L+ Y E + + V HVHN E+N +E+Y Y
Sbjct: 319 YNDHTGNFDFYQGT-SKFEVTEDSLVAKYSEFHQGLKKYVFHVHNLESNLMEKYYYQAEF 377
Query: 298 FGFVQVKRN-LVYDPKKITSG--LNLFMAENIDNRKVYMIMRGRDGRLQKETSGSGGFEK 354
VQ N L+YDP KIT L + ++ V +I+R G+++KE GF +
Sbjct: 378 NSLVQTHCNDLIYDPAKITQSHVLAVINRNDLPQPVVEVIVRNLYGKIRKEIPEMYGFIQ 437
Query: 355 MQPVAVKTFQVQWVEMKTEFEKK 377
PV VKTF VQ M+ E KK
Sbjct: 438 -TPVTVKTFIVQ---MEEERRKK 456
>gi|17507339|ref|NP_493331.1| putative protein family member, with 2 coiled coil-4 domains
(1N856) [Caenorhabditis elegans]
gi|7503393|pir||T22179 hypothetical protein F44F1.4 - Caenorhabditis elegans
gi|3877123|emb|CAB03104.1| Hypothetical protein F44F1.4 [Caenorhabditis elegans]
Length = 559
Score = 167 bits (422), Expect = 7e-40
Identities = 137/444 (30%), Positives = 227/444 (51%), Gaps = 44/444 (9%)
Query: 9 SNPAPSPPPKFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGD-LIPHKCLICQPILTEK 67
S P P P K+++ KC +T + + + + + + +E D ++PH C CQP +TEK
Sbjct: 40 SEPVPR-PLKWSIHKCSSTNMSTIGLEHSDGRVYFFEFCAENDTILPHVC-SCQPDVTEK 97
Query: 68 HISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPAFLVKGNV 127
+ P YAV+ + +ED V+F +N+M+ KMEQF+Y+F+T FVE+ RPE+ YN G++
Sbjct: 98 DLFPDYAVWCEEIEDHVIFAFNSMSNKMEQFVYSFETHSFVEIERPELVYNRGNSTLGSI 157
Query: 128 VVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANSD 187
V AL+G E E +VIERD G + S+ +G Q +E++ + A N D
Sbjct: 158 VTALSG-EKETIVIERDENGAMKSRSSVHGD---NSQTPVDTLVMQSIEKN--ELAVNKD 211
Query: 188 EVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGDF 247
E + NE F L +Y ++LP ++++C L + + V SKT+G Y+ Y TG F
Sbjct: 212 EEVTNISNE-FGCL--DYLESLPELRIQRCSKLCGDIVQVVSKTTGSYSTYNYTIYTGKF 268
Query: 248 ---QKISCTLCTCEVTESNLIPLYVERNAS--ELVIHVHNTENNQIEQYIYDVRTFGFVQ 302
K+ CT C +E +L P Y + + VIH N+ N IEQY Y+ T F Q
Sbjct: 269 NNTNKVYCTSCNSVTSEKHLKPQYSVHSEALDARVIHCRNSLTNDIEQYTYNPDTNAFEQ 328
Query: 303 VK-RNLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKE--TSGSGGFEKMQPVA 359
V + L YDP +I++ N + A +QKE +S + + +
Sbjct: 329 VYCKELAYDPSRISNATNDYEA------------------IQKEKYSSITDEYVVLPAAP 370
Query: 360 VKTFQVQWVEMKTEFEKKKASTERVEPQHPVQTEGEDIMETVLAMVESFNCDLRKELGLT 419
VKTF V+ E K + ++ + ++ Q + + E IM+++L + + K+L
Sbjct: 371 VKTFAVRIQEEKQKKLDEEEQQKVLKIQELEKQKDEQIMKSMLELED------MKKLLEE 424
Query: 420 QDQEIPRKAPRVESAETEENIVKN 443
+D++I + + + +I+KN
Sbjct: 425 KDEKILMHVGKQRVMKFDMDILKN 448
>gi|25354063|pir||F87986 protein F44F1.6 [imported] - Caenorhabditis elegans
Length = 563
Score = 158 bits (400), Expect = 3e-37
Identities = 125/433 (28%), Positives = 208/433 (48%), Gaps = 30/433 (6%)
Query: 11 PAPSPPP---KFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGD-LIPHKCLICQPILTE 66
P P P K+ + KC I + + P+ + + +E D +PH C C PI+TE
Sbjct: 18 PGSKPVPRLLKWTIFKCSFMKIRTIGLHHPDGRLYFFEFCQGKDTFVPHVCSACLPIITE 77
Query: 67 KHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPAFLVKGN 126
K + P Y V+++ +ED+V+F +++M+ KMEQF+Y+F+T FVEV+ PE+ YN G+
Sbjct: 78 KDLFPDYIVWAEEIEDYVIFAFSSMSNKMEQFVYSFETRRFVEVDLPELVYNRGDATTGD 137
Query: 127 VVVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANS 186
+V AL G E E +VIERD G + S + Q++E++ +
Sbjct: 138 IVAALYG-ENETIVIERDENGAMLIRSFVH---KDNSRKPVNTLVMQNIEKNGLQVGKDE 193
Query: 187 DEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGD 246
+ IS+ + Y +Y + LP +++ C N+ + V+SK +G Y + Y+ TG
Sbjct: 194 EVTDISN-----EFGYLDYVETLPELKIKTC-SANRTSIHVFSKKTGRYLKYHYVINTGS 247
Query: 247 F---QKISCTLCTCEVTESNLIPLY--VERNASELVIHVHNTENNQIEQYIYDVRTFGFV 301
F + C+ C +E L+P Y + VIH N + IEQY ++ T F
Sbjct: 248 FINTSNLDCSNCNSVTSEKYLLPEYSVYSKALDARVIHCTNNLTSDIEQYTFNPDTNAFE 307
Query: 302 QVK-RNLVYDPKKI--TSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSG--SGGFEKMQ 356
QV + LVYDP + S EN+ N +I R +QKE + + +
Sbjct: 308 QVYCKELVYDPNRFNRASLAAYVFPENVANNGTVIISRDVYEVIQKEKYSIVTDEYVVLP 367
Query: 357 PVAVKTFQVQWVEMKT-----EFEKKKASTERVEPQHPVQTEGEDI-METVLAMVESFNC 410
VKTF V+ E K E ++K T+ +E Q Q ++ M+ + ++E +
Sbjct: 368 AAPVKTFAVRIQEEKQKKLDEEEQQKVLKTQELEKQKDGQIVIMELEMKEMTTLLEEKDT 427
Query: 411 DLRKELGLTQDQE 423
++ + +D+E
Sbjct: 428 RIKMHVEKHRDKE 440
>gi|17507343|ref|NP_493329.1| putative protein family member, with 2 coiled coil-4 domains
(1N854) [Caenorhabditis elegans]
gi|7503395|pir||T22180 hypothetical protein F44F1.6a - Caenorhabditis elegans
gi|5824502|emb|CAB54248.1| Hypothetical protein F44F1.6a [Caenorhabditis elegans]
Length = 493
Score = 155 bits (391), Expect = 3e-36
Identities = 120/396 (30%), Positives = 191/396 (48%), Gaps = 29/396 (7%)
Query: 11 PAPSPPP---KFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGD-LIPHKCLICQPILTE 66
P P P K+ + KC I + + P+ + + +E D +PH C C PI+TE
Sbjct: 18 PGSKPVPRLLKWTIFKCSFMKIRTIGLHHPDGRLYFFEFCQGKDTFVPHVCSACLPIITE 77
Query: 67 KHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPAFLVKGN 126
K + P Y V+++ +ED+V+F +++M+ KMEQF+Y+F+T FVEV+ PE+ YN G+
Sbjct: 78 KDLFPDYIVWAEEIEDYVIFAFSSMSNKMEQFVYSFETRRFVEVDLPELVYNRGDATTGD 137
Query: 127 VVVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANS 186
+V AL G E E +VIERD G + S + Q++E++ +
Sbjct: 138 IVAALYG-ENETIVIERDENGAMLIRSFVH---KDNSRKPVNTLVMQNIEKNGLQVGKDE 193
Query: 187 DEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGD 246
+ IS+ + Y +Y + LP +++ C N+ + V+SK +G Y + Y+ TG
Sbjct: 194 EVTDISN-----EFGYLDYVETLPELKIKTC-SANRTSIHVFSKKTGRYLKYHYVINTGS 247
Query: 247 F---QKISCTLCTCEVTESNLIPLY--VERNASELVIHVHNTENNQIEQYIYDVRTFGFV 301
F + C+ C +E L+P Y + VIH N + IEQY ++ T F
Sbjct: 248 FINTSNLDCSNCNSVTSEKYLLPEYSVYSKALDARVIHCTNNLTSDIEQYTFNPDTNAFE 307
Query: 302 QVK-RNLVYDPKKI--TSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSG--SGGFEKMQ 356
QV + LVYDP + S EN+ N +I R +QKE + + +
Sbjct: 308 QVYCKELVYDPNRFNRASLAAYVFPENVANNGTVIISRDVYEVIQKEKYSIVTDEYVVLP 367
Query: 357 PVAVKTFQVQWVEMKT-----EFEKKKASTERVEPQ 387
VKTF V+ E K E ++K T+ +E Q
Sbjct: 368 AAPVKTFAVRIQEEKQKKLDEEEQQKVLKTQELEKQ 403
>gi|17507341|ref|NP_493328.1| putative mitochondrial protein family member, with 2 coiled coil-4
domains (1N848) [Caenorhabditis elegans]
gi|7503394|pir||T22178 hypothetical protein F44F1.5 - Caenorhabditis elegans
gi|3877121|emb|CAB03102.1| Hypothetical protein F44F1.5 [Caenorhabditis elegans]
Length = 645
Score = 124 bits (311), Expect = 6e-27
Identities = 133/486 (27%), Positives = 225/486 (46%), Gaps = 59/486 (12%)
Query: 18 KFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGD-LIPHKCLICQPILTEKHISPYYAVY 76
K+ + KC + + + V P+ + + +E D +PH C C PI+ EK + P YAV+
Sbjct: 38 KWTVCKCSSLKMRTIRVAHPDGRSYPFEFCAEKDTFVPHVCSPCLPIIAEKGLFPDYAVW 97
Query: 77 SDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPAFLVKGNVVVALNGPEG 136
+ + + V+F +N++ FVEV+RPE+ Y+ G++V LNG E
Sbjct: 98 CEEIGNRVIFAFNSI---------------FVEVDRPELVYDREKATTGSMVTVLNG-EK 141
Query: 137 ELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANSDEVKISSGNE 196
E +VIERD G + S+ + Q +E + + + +IS+
Sbjct: 142 ETIVIERDETGAMMTRSSMHA---CSPKNPVTTLVMQSIETNGLMVREDEEVTEISN--- 195
Query: 197 SFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGDF---QKISCT 253
+ + +Y K L F+++ C + V SK +G Y++ Y + TG F I C+
Sbjct: 196 --EFGFLDYLKTLAPFRIQYC-GFTTIVVAVLSKKTGRYSKYHYDNSTGKFINATSIGCS 252
Query: 254 LCTCEVTESNLIPLYV--ERNASELVIHVHNTENNQIEQYIYDVRTFGFVQVK-RNLVYD 310
+C +E +LIP Y + VIH N + + EQY Y+ T F QV + LVYD
Sbjct: 253 MCNSVTSEDDLIPKYSVHSKVLDTRVIHCFNCLSEKNEQYTYNSATNEFEQVYCKELVYD 312
Query: 311 PKKIT-SGLNLFMAENIDNRKVYMIMRGRDGRLQKET--SGSGGFEKMQPVAVKTFQVQW 367
++ T + L++F +N +I R D +QKE S + + ++ VKTF V+
Sbjct: 313 ARRATNTTLDVFAKDN----GTVLISRTIDETIQKEKYCSLTKEYVILRAARVKTFAVK- 367
Query: 368 VEMKTEFEKKKASTERVEPQHPVQTEGEDIMETVLAMVESFNCDLRKELGLTQDQEIPRK 427
++ E +KK E+++ Q + + I+E L M + ++K L ++ RK
Sbjct: 368 --IEEERQKKLDEKEQLKVQDQENPKDKQILEIKLEMEK-----IKKSL-----EQRDRK 415
Query: 428 APRVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYGYQELDDTMSEGLLEKEAES 487
R ES E V +E L AK+ + + N Y +L+ S+ L+ E+
Sbjct: 416 IMRHES----EQYVMGVE-LDCAKEELNESRMKIKEANDY-CSKLNAEKSQSLI-ASMET 468
Query: 488 KHQDAN 493
K Q+ N
Sbjct: 469 KKQNKN 474
>gi|17508851|ref|NP_493340.1| putative protein family member, with a coiled coil-4 domain (52.1
kD) (1N894) [Caenorhabditis elegans]
gi|7507090|pir||T24455 hypothetical protein T04D3.1 - Caenorhabditis elegans
gi|3879433|emb|CAB03285.1| Hypothetical protein T04D3.1 [Caenorhabditis elegans]
Length = 454
Score = 123 bits (308), Expect = 1e-26
Identities = 104/381 (27%), Positives = 171/381 (44%), Gaps = 40/381 (10%)
Query: 3 PLSALTSNPAP-SPP--PKFALGKCPATAIHVVSVLRPN--RQRFCYEKTDAGDLIPHKC 57
P + T P SPP P+ + CP I ++ R N F ++ IPH+C
Sbjct: 7 PCAVPTQRQVPMSPPTTPRILMKLCPIMEIPIIGGPRQNGTYNVFIFD-LKIRKFIPHRC 65
Query: 58 LICQPILTEKHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKY 117
C + E H+SP YA S V+F N +T ++EQ++Y+F+T F +V+ PE+ Y
Sbjct: 66 SSCAVKILEDHLSPMYASGS------VIFMRNEVTQEVEQYVYSFETGGFQQVDYPELVY 119
Query: 118 NPAFLVKGNVVVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDL-E 176
+ + + +V + +G+ V+IER + K G+ ++ +
Sbjct: 120 SAEKFTESSFIVMIENSDGKKVLIERGGNEAVRKLEYRLGKCVEMPKVEVQLLAAEEFDD 179
Query: 177 RDRWDRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYT 236
D W S N+S + +Y + LP F+ C L + + + G Y
Sbjct: 180 ADPW------------SDNDSLSSEHLDYNETLPAFKTTFCQDFQMYVLYIIT-SRGHYE 226
Query: 237 RLEYIDETGDFQKISCTLCTCEVTESNLIPLYVE--RNASELVIHVHNTENNQIEQYIYD 294
+ Y T F+ + C C E +L+P Y E VIHV N+ +++EQY++D
Sbjct: 227 KYIYNQSTSQFEILDCEKCPDTTREVDLLPKYAEFCEEIQAYVIHVFNSFTDRMEQYVFD 286
Query: 295 VRTFGFVQVKR-NLVYDPKK---ITSGLNLFMAENIDNRKVYMIMRGRDGRLQKET--SG 348
+ GFV+V + L YD K TS + + + +IMRG GRL+KE S
Sbjct: 287 SKIQGFVEVNQPELKYDSSKDQDPTSSIFFVL------KGTTVIMRGAQGRLKKEVYCSI 340
Query: 349 SGGFEKMQPVAVKTFQVQWVE 369
F ++ +K+F Q++E
Sbjct: 341 KKHFVEVPNSVIKSFDTQFME 361
>gi|17511179|ref|NP_493323.1| putative nuclear protein family member (1N835) [Caenorhabditis
elegans]
gi|7510887|pir||T27672 hypothetical protein ZK1053.4 - Caenorhabditis elegans
gi|3925432|emb|CAB04980.1| Hypothetical protein ZK1053.4 [Caenorhabditis elegans]
Length = 667
Score = 113 bits (283), Expect = 1e-23
Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 15/366 (4%)
Query: 17 PKF------ALGKCPATAIHVVSVLRPNRQRFCYEKTDAGDLIPHKCLICQPILTEKHIS 70
PKF + G CP+ + V +P F Y+ + H C+ C+ + E +
Sbjct: 254 PKFDASSMLSTGYCPSRNVATFKVDKPYGTVFTYDHQNR-KFQEHCCVECREQIEENDLY 312
Query: 71 PYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPAFLVKGNVVVA 130
P YAV+ + + + V+F T ++ QF+++FKT F +V+ PE+ ++ G+ V
Sbjct: 313 PLYAVWCEKISNHVIFMEIGFTEEIGQFVFSFKTGGFEQVDFPELVFSEHVEYNGSFVAM 372
Query: 131 LNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANSDEVK 190
+ G + V+IERD G K +F +++ + +
Sbjct: 373 IAGEGEDKVIIERDESG--EKVRKLLHKFGHSVQIPYAPVRPLWMQKAEEPVEEDVEPES 430
Query: 191 ISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGDFQKI 250
+ E+ D + Y +LP ++ C + L + + +G Y + D+ +
Sbjct: 431 DAEPEETLDAEHVSYITSLPTYKKEYCQTYEMDVLYML-QPNGQYLKYSLNDDENELNLH 489
Query: 251 SCTLCTCEVTESNLIPLYVERNAS--ELVIHVHNTENNQIEQYIYDVRTFGFVQVK-RNL 307
C C TE++LIP Y E A + +IHV N ++E Y YD F QV L
Sbjct: 490 VCDCCKTGTTENDLIPKYSEYCAKTCKYIIHVQNQFTEKMETYAYDCEKKRFHQVTCPGL 549
Query: 308 VYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKET--SGSGGFEKMQPVAVKTFQV 365
VYD +K+ G F+ E + V +IMR DG+L+KE F K+ V TF V
Sbjct: 550 VYDSEKVQEGNIFFILEQNSMQGVEVIMRDDDGQLRKEQFCMVKKQFVKLPKTTVATFAV 609
Query: 366 QWVEMK 371
Q E K
Sbjct: 610 QIAEKK 615
>gi|17511177|ref|NP_493324.1| putative protein family member, with a coiled coil-4 domain (1N839)
[Caenorhabditis elegans]
gi|7510886|pir||T27669 hypothetical protein ZK1053.3 - Caenorhabditis elegans
gi|3925429|emb|CAB04977.1| Hypothetical protein ZK1053.3 [Caenorhabditis elegans]
Length = 780
Score = 110 bits (275), Expect = 8e-23
Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 38/391 (9%)
Query: 13 PSPPPKFALGKCPATAIHVVSVLRPNRQR-FCYEKTDAGDLIPHKCLICQPILTEKHISP 71
P+ K ++ C + I V+ + + R FC + D HKC IC+ + E +S
Sbjct: 398 PAVIQKISIRYCLSKEIEVIETIDEWKCREFCTYDHNLKDFRRHKCEICEVEVQECDLSL 457
Query: 72 YYAVYSDLLEDFVLFGYNTMTGKMEQFIYAFKTDCFVEV------------NRPEIKYNP 119
+ +ED VL YN + G++EQ++++F+T F EV N PE P
Sbjct: 458 RQTKWCSHIEDQVLLMYNRVNGRLEQYVFSFETKGFKEVYCSCIEVTYRGKNGPE---EP 514
Query: 120 AFLVKGNVVVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDR 179
L G+ E VVI+ G++ + + +D
Sbjct: 515 VLLTNGS----------EHVVIKEADPGVVKLQLVGENHVEIPAVPVQQLSAEEIEMQDA 564
Query: 180 WDRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLE 239
+D + + E + S S+++ + LP F+VR C K+ L V S G Y + +
Sbjct: 565 YDSSKSESESEHESEQISYNKTFIS---TLPMFKVRHCPLSRKDVLYVRSNNLGQYEKYD 621
Query: 240 YIDETGDFQKISCTLCTCEVTESNLIPLYVER--NASELVIHVHNTENNQIEQYIYDVRT 297
Y F+ C+ C +E +L+P Y E +E VIH N ++EQYIYD T
Sbjct: 622 YHPTYHRFEPFKCSKCKDATSEDHLVPKYAEHCPETNEFVIHTENLFTERMEQYIYDSMT 681
Query: 298 FGFVQVKR-NLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKET--SGSGGFEK 354
GF QV +YDP K + N+F+ N + +I R +DGR +KE F
Sbjct: 682 QGFRQVYYPQFLYDPSKDHTS-NVFVTVNYLST---VITRDKDGRFKKEKFCDNLKKFVA 737
Query: 355 MQPVAVKTFQVQWVEMKTEFEKKKASTERVE 385
+ V V TF VQ +E K + + ++ E
Sbjct: 738 IPEVEVNTFTVQELEKKKNKRRVDSDSDSFE 768
>gi|17507347|ref|NP_493332.1| very Early Transcript VET-6, putative protein family member, with a
coiled coil-4 domain (95.6 kD) (vet-6) [Caenorhabditis
elegans]
gi|7503397|pir||T22182 hypothetical protein F44F1.7 - Caenorhabditis elegans
gi|3877124|emb|CAB03105.1| Hypothetical protein F44F1.7 [Caenorhabditis elegans]
gi|3878634|emb|CAB07642.1| Hypothetical protein F44F1.7 [Caenorhabditis elegans]
Length = 843
Score = 106 bits (265), Expect = 1e-21
Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 30/296 (10%)
Query: 55 HKCLICQPILTEKHISPYYAVYSDLLEDFVLFGYNTMTG-KMEQFIYAFKTDCFVEVNRP 113
HKCL C P + E H+ P AV+++ + +FV+F N +T K EQ++++FKT F +VN P
Sbjct: 539 HKCLACVPRVQENHLFPTCAVWNEKISNFVIFMDNMVTKQKDEQYMFSFKTGGFEQVNYP 598
Query: 114 EIKYNPAFLVKG-NVVVALNGPEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXX 172
E++ PA K + V A+NG + V+I++ G + K YG++
Sbjct: 599 EVQ--PAQGPKNTDFVAAVNGDGDDQVIIQKSRFG-VKKLEFRYGKYVKIPSVEVRTLLM 655
Query: 173 QDLERDRWDRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTS 232
++LE G E + E LP +R C ++ L ++S
Sbjct: 656 KELE-----------------GVE----MVQEPSSTLPLSTIRWCPTYSQSALYIFSSRL 694
Query: 233 GDYTRLEYIDETGDFQKISCTLCTCEVTESNLIPLYVERNAS--ELVIHVHNTENNQIEQ 290
G Y + + T F++++C+ C V E +L PLY E S VIHV N +IE+
Sbjct: 695 GHYLKYAFNPSTQQFEQLNCSGCPLNVEEWHLCPLYAEYADSIKTYVIHVFNDFTKEIEK 754
Query: 291 YIYDVRTFGFVQVK-RNLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKE 345
Y+Y V F QV +VYD K S LF + N + M+ +GR++KE
Sbjct: 755 YMYCVTGKCFYQVTCPEIVYDSSKAHSSTVLFTV-SAPNHPFTIFMKDVNGRIKKE 809
>gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans]
gi|14530537|emb|CAA82353.2| C. elegans CBP-1 protein (corresponding sequence R10E11.1a)
[Caenorhabditis elegans]
Length = 2045
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 40/162 (24%)
Query: 568 AENTNQISNEETPKIDIFEGYNGSFLFGT------------------------NTSKEW- 602
A T I+N +FEG+NG+ + +KEW
Sbjct: 535 AMRTGNITNS------LFEGFNGNPFQNGPNRGGPRPPGGNGEIPNLPPPDMPDCTKEWH 588
Query: 603 --IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR 660
+ +D+RNH+VGKL+KA +P N E MN K LIA ARK E E+ E++NDR+EYY
Sbjct: 589 HQVTKDLRNHLVGKLVKAIFPE-PNQEAMNDNRLKDLIAYARKVEKEMFESANDREEYYH 647
Query: 661 LMQLTVDQILKKTLKK-----DQRATEHNHQQPTQSSDELAK 697
L+ + +I K+ +K +Q A H+ Q S+ELA+
Sbjct: 648 LLAEKIYKIQKELQEKKNSRLNQGAAAHD-QYAIPPSNELAQ 688
>gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans
Length = 2027
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 40/162 (24%)
Query: 568 AENTNQISNEETPKIDIFEGYNGSFLFGT------------------------NTSKEW- 602
A T I+N +FEG+NG+ + +KEW
Sbjct: 546 AMRTGNITNS------LFEGFNGNPFQNGPNRGGPRPPGGNGEIPNLPPPDMPDCTKEWH 599
Query: 603 --IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR 660
+ +D+RNH+VGKL+KA +P N E MN K LIA ARK E E+ E++NDR+EYY
Sbjct: 600 HQVTKDLRNHLVGKLVKAIFPE-PNQEAMNDNRLKDLIAYARKVEKEMFESANDREEYYH 658
Query: 661 LMQLTVDQILKKTLKK-----DQRATEHNHQQPTQSSDELAK 697
L+ + +I K+ +K +Q A H+ Q S+ELA+
Sbjct: 659 LLAEKIYKIQKELQEKKNSRLNQGAAAHD-QYAIPPSNELAQ 699
>gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans]
gi|20455476|sp|P34545|CBP1_CAEEL Protein cbp-1
gi|25299632|pir||G88564 protein R10E11.1 [imported] - Caenorhabditis elegans
gi|17645979|emb|CAD18875.1| C. elegans CBP-1 protein (corresponding sequence R10E11.1b)
[Caenorhabditis elegans]
Length = 2056
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 40/162 (24%)
Query: 568 AENTNQISNEETPKIDIFEGYNGSFLFGT------------------------NTSKEW- 602
A T I+N +FEG+NG+ + +KEW
Sbjct: 546 AMRTGNITNS------LFEGFNGNPFQNGPNRGGPRPPGGNGEIPNLPPPDMPDCTKEWH 599
Query: 603 --IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR 660
+ +D+RNH+VGKL+KA +P N E MN K LIA ARK E E+ E++NDR+EYY
Sbjct: 600 HQVTKDLRNHLVGKLVKAIFPE-PNQEAMNDNRLKDLIAYARKVEKEMFESANDREEYYH 658
Query: 661 LMQLTVDQILKKTLKK-----DQRATEHNHQQPTQSSDELAK 697
L+ + +I K+ +K +Q A H+ Q S+ELA+
Sbjct: 659 LLAEKIYKIQKELQEKKNSRLNQGAAAHD-QYAIPPSNELAQ 699
>gi|17507345|ref|NP_493330.1| putative protein family member (1N854) [Caenorhabditis elegans]
gi|7503396|pir||T22181 hypothetical protein F44F1.6b - Caenorhabditis elegans
gi|5824503|emb|CAB54249.1| Hypothetical protein F44F1.6b [Caenorhabditis elegans]
Length = 119
Score = 67.8 bits (164), Expect = 6e-10
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 11 PAPSPPP---KFALGKCPATAIHVVSVLRPNRQRFCYEKTDAGD-LIPHKCLICQPILTE 66
P P P K+ + KC I + + P+ + + +E D +PH C C PI+TE
Sbjct: 18 PGSKPVPRLLKWTIFKCSFMKIRTIGLHHPDGRLYFFEFCQGKDTFVPHVCSACLPIITE 77
Query: 67 KHISPYYAVYSDLLEDFVLFGYNTMTGKMEQ 97
K + P Y V+++ +ED+V+F +++M+ KMEQ
Sbjct: 78 KDLFPDYIVWAEEIEDYVIFAFSSMSNKMEQ 108
>gi|17554044|ref|NP_499201.1| CREB-binding protein like family member (36.7 kD) (3L15)
[Caenorhabditis elegans]
gi|25395947|pir||D88569 protein K03H1.10 [imported] - Caenorhabditis elegans
gi|3877003|emb|CAA82940.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans]
gi|3878179|emb|CAA82665.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans]
Length = 322
Score = 59.3 bits (142), Expect = 3e-07
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 599 SKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDR 655
+KEW + D+RNH+VGKL+KA P E MN K L A ARK E E+ E + DR
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPA---PEMMNDIRLKDLNAYARKVEKEVFETAIDR 222
Query: 656 DEYYRLMQLTVDQILKKTL-KKDQRATEHNHQQPTQSSDELAK 697
YY L+ + +I K+ KK+ R + Q P DE A+
Sbjct: 223 KNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPL---DEFAR 262
>gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elegans (fragment)
Length = 316
Score = 58.9 bits (141), Expect = 3e-07
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 599 SKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDR 655
+KEW + D+RNH+VGKL+KA P E MN K L A ARK E E+ E + DR
Sbjct: 160 TKEWHRQVTNDLRNHIVGKLVKAICPA---PEMMNDIRLKDLNAYARKVEKEVFETAIDR 216
Query: 656 DEYYRLMQLTVDQILKKTL-KKDQRATEHNHQQPTQSSDELAK 697
YY L+ + +I K+ KK+ R + Q P DE A+
Sbjct: 217 KNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPL---DEFAR 256
>gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-terminal} [mice, Peptide Partial,
688 aa]
Length = 688
Score = 54.7 bits (130), Expect = 6e-06
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K+W I +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 566 TGIRKQWHEDITQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 624
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQP 688
N+R EYY L+ + +I K+ +K + + + P
Sbjct: 625 NNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLP 660
>gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p300 [Mus musculus]
gi|29244384|ref|NP_808489.1| hypothetical protein A730011L11 [Mus musculus]
gi|26335221|dbj|BAC31311.1| unnamed protein product [Mus musculus]
Length = 714
Score = 54.3 bits (129), Expect = 7e-06
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K+W I +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 566 TGIRKQWHEDITQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 624
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQP 688
N+R EYY L+ + +I K+ +K + + + P
Sbjct: 625 NNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLP 660
>gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p300 [Rattus norvegicus]
Length = 1605
Score = 53.9 bits (128), Expect = 1e-05
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K+W I +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 194 TGIRKQWHEDITQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 252
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPT 689
N+R EYY L+ + +I K+ +K + + + P+
Sbjct: 253 NNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPS 289
>gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p300 [Rattus norvegicus]
Length = 2156
Score = 53.5 bits (127), Expect = 1e-05
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K+W I +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 194 TGIRKQWHEDITQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 252
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPT 689
N+R EYY L+ + +I K+ +K + + + P+
Sbjct: 253 NNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPS 289
>gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens]
gi|3024341|sp|Q09472|P300_HUMAN E1A-associated protein p300
gi|627657|pir||A54277 transcription adaptor protein p300 - human
gi|495301|gb|AAA18639.1| p300 protein
Length = 2414
Score = 53.5 bits (127), Expect = 1e-05
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K+W I +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 565 TGIRKQWHEDITQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 623
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQP 688
N+R EYY L+ + +I K+ +K + + + P
Sbjct: 624 NNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLP 659
>gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens]
Length = 1553
Score = 53.1 bits (126), Expect = 2e-05
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K+W I +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 565 TGIRKQWHEDITQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 623
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQP 688
N+R EYY L+ + +I K+ +K + + + P
Sbjct: 624 NNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLP 659
>gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubinstein-Taybi syndrome)
[Xenopus laevis]
Length = 1047
Score = 52.4 bits (124), Expect = 3e-05
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+RNH+V KL++A +P + + + L+A ARK E ++ E++
Sbjct: 575 TGVRKAWHEHVTQDLRNHLVHKLVQAIFP-TPDPAALKDRRMENLVAYARKVEGDMYESA 633
Query: 653 NDRDEYYRLMQLTVDQILKKTLKK 676
N RDEYY + + +I K+ +K
Sbjct: 634 NSRDEYYHFLAEKIYKIQKELEEK 657
>gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambiae]
gi|30178093|gb|EAA06516.2| ENSANGP00000004748 [Anopheles gambiae str. PEST]
Length = 2572
Score = 52.4 bits (124), Expect = 3e-05
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 599 SKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDR 655
+K+W + D+RNH+V KL++A +P + ++ L+A A+K E ++ E +N R
Sbjct: 742 TKDWHHSVTPDLRNHLVHKLVQAIFPSPDPSAMFDKRMY-NLVAYAKKVEGDMYEMANSR 800
Query: 656 DEYYRLMQLTVDQILKKTLKKDQRATE 682
EYY L+ + +I K+ +K Q+ E
Sbjct: 801 SEYYHLLAEKIYKIQKELEEKRQKRKE 827
>gi|2996629|gb|AAC08447.1| CBP [Homo sapiens]
Length = 555
Score = 52.0 bits (123), Expect = 4e-05
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 320 TGVRKGWHEHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 378
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R+ H
Sbjct: 379 NSRDEYYHLLAEKIYKI-QKELEEKRRSRLH 408
>gi|631119|pir||S39162 transcription coactivator CREB-binding protein - human
Length = 2440
Score = 51.6 bits (122), Expect = 5e-05
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 586 TGVRKGWHEHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 644
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R+ H
Sbjct: 645 NSRDEYYHLLAEKIYKI-QKELEEKRRSRLH 674
>gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens]
gi|3023440|sp|Q92793|CBP_HUMAN CREB-binding protein
gi|2443859|gb|AAC51770.1| CREB-binding protein
Length = 2442
Score = 51.6 bits (122), Expect = 5e-05
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 586 TGVRKGWHEHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 644
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R+ H
Sbjct: 645 NSRDEYYHLLAEKIYKI-QKELEEKRRSRLH 674
>gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens]
Length = 2442
Score = 51.6 bits (122), Expect = 5e-05
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 586 TGVRKGWHEHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 644
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R+ H
Sbjct: 645 NSRDEYYHLLAEKIYKI-QKELEEKRRSRLH 674
>gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus]
gi|19547887|gb|AAL87532.1| CREB-binding protein [Mus musculus]
Length = 2429
Score = 51.6 bits (122), Expect = 5e-05
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 579 TGVRKGWHEHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 637
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R+ H
Sbjct: 638 NSRDEYYHLLAEKIYKI-QKELEEKRRSRLH 667
>gi|737920|prf||1923401A protein CBP
Length = 2441
Score = 51.2 bits (121), Expect = 7e-05
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 585 TGVRKGWHERVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 643
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R H
Sbjct: 644 NSRDEYYHLLAEKIYKI-QKELEEKRRTRLH 673
>gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein
gi|481698|pir||S39161 CREB-binding protein - mouse
gi|435855|gb|AAB28651.1| CREB-binding protein; CBP [Mus sp.]
Length = 2441
Score = 51.2 bits (121), Expect = 7e-05
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 596 TNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEAS 652
T K W + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++
Sbjct: 585 TGVRKGWHEHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESA 643
Query: 653 NDRDEYYRLMQLTVDQILKKTLKKDQRATEH 683
N RDEYY L+ + +I +K L++ +R H
Sbjct: 644 NSRDEYYHLLAEKIYKI-QKELEEKRRTRLH 673
>gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica]
Length = 2245
Score = 51.2 bits (121), Expect = 7e-05
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 597 NTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASN 653
++ K+W + +D+RNH+V KL++A +P + + K L+A ARK E ++ E++N
Sbjct: 500 SSRKDWHAQVTQDLRNHLVHKLVQAIFPTPDQATLRDSRM-KNLVAYARKVEGDMYESAN 558
Query: 654 DRDEYYRLMQLTVDQILKKTLKK 676
+R +YY L+ + +I K+ +K
Sbjct: 559 NRGQYYHLLAEKIYKIQKELEEK 581
>gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In Complex
With Phosphorylated Kinase Inducible Domain (Pkid) Of
Rat Creb (Cyclic Amp Response Element Binding Protein),
Nmr 17 Structures
Length = 81
Score = 47.4 bits (111), Expect = 0.001
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 601 EWIVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDEYYR 660
E + +D+R+H+V KL++A +P + + + L+A A+K E ++ E++N RDEYY
Sbjct: 8 EHVTQDLRSHLVHKLVQAIFP-TPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYH 66
Query: 661 LMQLTVDQILKK 672
L+ + +I K+
Sbjct: 67 LLAEKIYKIQKE 78
>gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster)
gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster]
Length = 3190
Score = 46.6 bits (109), Expect = 0.002
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 597 NTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASN 653
+ K+W + D+RNH+V KL++A +P + M + L++ A K E ++ E +
Sbjct: 938 DNEKDWRESVTADLRNHLVHKLVQAIFP-TSDPTTMQDKRMHNLVSYAEKVEKDMYEMAK 996
Query: 654 DRDEYYRLMQLTVDQILKKTLKKDQRATE 682
R EYY L+ + +I K+ +K + E
Sbjct: 997 SRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster]
gi|22833041|gb|AAF46516.2| CG15319-PB [Drosophila melanogaster]
Length = 3276
Score = 46.6 bits (109), Expect = 0.002
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 597 NTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASN 653
+ K+W + D+RNH+V KL++A +P + M + L++ A K E ++ E +
Sbjct: 938 DNEKDWRESVTADLRNHLVHKLVQAIFP-TSDPTTMQDKRMHNLVSYAEKVEKDMYEMAK 996
Query: 654 DRDEYYRLMQLTVDQILKKTLKKDQRATE 682
R EYY L+ + +I K+ +K + E
Sbjct: 997 SRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|7497081|pir||T33078 hypothetical protein C35E7.1 - Caenorhabditis elegans (fragment)
gi|25395337|pir||F87914 protein C35E7.1 [imported] - Caenorhabditis elegans
Length = 583
Score = 40.4 bits (93), Expect = 0.13
Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 41/339 (12%)
Query: 18 KFALGKCPATAIHVVSVLRPNR-QRFCYEKTDAGDLIPHKCLICQPILTEKHISPYYAVY 76
K G C V V N+ Y D + +P KCL CQP +TEK++ P +
Sbjct: 15 KMITGYCGFCKTDYVGVDHGNKCYYKYYYDYDLEEFMPLKCLDCQPKITEKNLFPQEGTF 74
Query: 77 SD-LLEDFVLFGYNTMTGKMEQFIYAFKTDCF--VEVNRPEIKYNPAFLVKGNVVVALNG 133
D ++ V+ +N +T +E +IY K C +E P + Y+P + G+ + ++
Sbjct: 75 WDPKMQKAVMPFHNVVTNWIEYYIYDIKEKCLEQIEPVVPPVSYDPTPV--GDRICIVDS 132
Query: 134 PEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANSDEVKISS 193
+++ G + + G++ ++L+R R+
Sbjct: 133 KTETILIRRHPEHGHVCTQQFINGEYQDVPNTKVNTLQMKELKRYGQCRSLT-------- 184
Query: 194 GNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGDFQKISCT 253
+ LP C ++ + V + + + + Y D ++ SC
Sbjct: 185 -----------HYLRLPILNTSYCFKSDQYIVRVPGRNN-EKPKEFYFD-----REFSCF 227
Query: 254 LCT-CEVTESNLIPLYVERNASELVIHVH-----NTENNQIEQYIYDVRTFGFVQVK-RN 306
+ + V E L P Y + S L HV N + IEQY+Y+ F QV
Sbjct: 228 MPSLLTVPEDILYPEYSVWSES-LKKHVTFTAVWNGRSEIIEQYVYNCEQGQFEQVHVPE 286
Query: 307 LVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKE 345
LVYDP +N+ + +R + +IM+ DG K+
Sbjct: 287 LVYDPNHEVP-MNILFIQMSKDRPI-VIMKDEDGNFVKQ 323
>gi|25145085|ref|NP_492836.2| very Early Transcript VET-2, putative cytoplasmic protein family
member, with a coiled coil-4 domain (vet-2)
[Caenorhabditis elegans]
gi|16604119|gb|AAC17517.3| Hypothetical protein C35E7.1 [Caenorhabditis elegans]
Length = 744
Score = 39.7 bits (91), Expect = 0.18
Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 41/339 (12%)
Query: 18 KFALGKCPATAIHVVSVLRPNR-QRFCYEKTDAGDLIPHKCLICQPILTEKHISPYYAVY 76
K G C V V N+ Y D + +P KCL CQP +TEK++ P +
Sbjct: 15 KMITGYCGFCKTDYVGVDHGNKCYYKYYYDYDLEEFMPLKCLDCQPKITEKNLFPQEGTF 74
Query: 77 SD-LLEDFVLFGYNTMTGKMEQFIYAFKTDCF--VEVNRPEIKYNPAFLVKGNVVVALNG 133
D ++ V+ +N +T +E +IY K C +E P + Y+P + G+ + ++
Sbjct: 75 WDPKMQKAVMPFHNVVTNWIEYYIYDIKEKCLEQIEPVVPPVSYDPTPV--GDRICIVDS 132
Query: 134 PEGELVVIERDCRGLLSKESTSYGQFXXXXXXXXXXXXXQDLERDRWDRAANSDEVKISS 193
+++ G + + G++ ++L+R R+
Sbjct: 133 KTETILIRRHPEHGHVCTQQFINGEYQDVPNTKVNTLQMKELKRYGQCRSLT-------- 184
Query: 194 GNESFDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTSGDYTRLEYIDETGDFQKISCT 253
+ LP C ++ + V + + + + Y D ++ SC
Sbjct: 185 -----------HYLRLPILNTSYCFKSDQYIVRVPGRNN-EKPKEFYFD-----REFSCF 227
Query: 254 LCT-CEVTESNLIPLYVERNASELVIHVH-----NTENNQIEQYIYDVRTFGFVQVK-RN 306
+ + V E L P Y + S L HV N + IEQY+Y+ F QV
Sbjct: 228 MPSLLTVPEDILYPEYSVWSES-LKKHVTFTAVWNGRSEIIEQYVYNCEQGQFEQVHVPE 286
Query: 307 LVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKE 345
LVYDP +N+ + +R + +IM+ DG K+
Sbjct: 287 LVYDPNHEVP-MNILFIQMSKDRPI-VIMKDEDGNFVKQ 323
>gi|29346247|ref|NP_809750.1| ATP-dependent protease [Bacteroides thetaiotaomicron VPI-5482]
gi|29338142|gb|AAO75944.1| ATP-dependent protease [Bacteroides thetaiotaomicron VPI-5482]
Length = 626
Score = 38.9 bits (89), Expect = 0.36
Identities = 22/93 (23%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 313 KITSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSGSGGFEKMQPVAVKTFQVQW-VEMK 371
+I + + + E+ID ++ ++ + +Q E GSG ++++ + +K ++ W E++
Sbjct: 238 EIKASIQMRAREDIDQQQREYFLQQQIKTIQDELGGSGQEQEIEEMRLKAVKMHWNAEVR 297
Query: 372 TEFEKKKASTERVEPQHPVQTEGEDIMETVLAM 404
F K+ A ER PQ P + + ++T+L +
Sbjct: 298 DTFLKELAKLERTHPQSPDFSVQLNYLQTMLNL 330